F329338
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 217 | 185 | 434 | 326 |
Family's Representative Sequence
| Representative Sequence | iso_pu_bacteria|2643221692|2644514850 |
| Length | 361 |
| Sequence | AHVAGGADAHPRLGTTAGVGSPRNEGRTAVGVRRMIDVDALAEEVKAGQRSALARAITLVESTRSDHRELAQQLLLRVAAEPGSVVSNRVGITGVPGVGKSTFIDALGMYLLAKGHRVAVLAVDPSSTRTGGSILGDKTRMARLSLEADAFIRPSPTAGTLGGVAKATRETIVLLEAAGYDVILVETVGVGQSEVTVANMVDVFCFLTLARTGDQLQGIKKGVLELAELVAVNKADGKHEIEAKGAARELAGALRLIHPHDALWKPPVLTMSGLEGIGLDKFWGTVLDHRRVLTDAGEFAEKRRRQQVDWTWTMVHDQILRRLADNPNVKDVRAQVESAVRAGTLTPALAAEQILTAFDRS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300002075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 | Metagenome | Rhizosphere |
| 2 | 3300002077 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 | Metagenome | Rhizosphere |
| 3 | 3300002239 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 | Metagenome | Rhizosphere |
| 4 | 3300002244 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 | Metagenome | Rhizosphere |
| 5 | 3300004798 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) | Metatranscriptome | Unclassified |
| 6 | 3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Metatranscriptome | Unclassified |
| 7 | 3300004803 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) | Metatranscriptome | Rhizosphere |
| 8 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Metagenome | Rhizosphere |
| 10 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 11 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 12 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 15 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005341 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG | Metagenome | Rhizosphere |
| 17 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 22 | 3300005437 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG | Metagenome | Rhizosphere |
| 23 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 27 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 28 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 29 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 30 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 31 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 32 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 34 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 35 | 3300005547 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 37 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 38 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 39 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 40 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 41 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 42 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 43 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 44 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 45 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 46 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 47 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 48 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 49 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 50 | 3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Metagenome | Rhizosphere |
| 51 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 54 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 55 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 56 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 57 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 58 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 59 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 60 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 61 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 62 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 63 | 3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Metagenome | Rhizosphere |
| 64 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 65 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 66 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 67 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 68 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 69 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 70 | 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Metagenome | Rhizosphere |
| 71 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 72 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 73 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025900 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025901 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025904 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025905 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 90 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 91 | 3300025934 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 92 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 93 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 94 | 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 95 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 96 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 97 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 98 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 99 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 100 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 101 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 102 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 103 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 104 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 105 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 106 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 107 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 108 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 109 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 110 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 111 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 112 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 113 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 114 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 115 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 116 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 117 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 118 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 119 | 3300031691 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA | Metagenome | Rhizosphere |
| 120 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 121 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 122 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 123 | 3300035113 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 124 | 3300035114 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 | Metagenome | Rhizosphere |
| 125 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 126 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 127 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 128 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 129 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 130 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 131 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 132 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 135 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 136 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 137 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 138 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 139 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 140 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 141 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 142 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 143 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 144 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 145 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 146 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 147 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 148 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 149 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 150 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 151 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 152 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 153 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 154 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 155 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 156 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 157 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 158 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 159 | 3300053094 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere | Metagenome | Endosphere |
| 160 | 3300053095 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere | Metagenome | Endosphere |
| 161 | 3300053102 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere | Metagenome | Endosphere |
| 162 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 163 | 3300053120 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere | Metagenome | Endosphere |
| 164 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
| 165 | 3300053144 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere | Metagenome | Endosphere |
| 166 | 3300053150 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere | Metagenome | Endosphere |
| 167 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 168 | 3300053178 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere | Metagenome | Endosphere |
| 169 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 170 | 2643221692 | Nocardia sp. Root136 | Isolate | Unclassified |
| 171 | 2558860112 | Pseudonocardia acaciae DSM 45401 | Isolate | Unclassified |
| 172 | 2579778521 | Frankia torreyi CpI1-S | Isolate | Unclassified |
| 173 | 2619618881 | Frankia sp. ACN1ag | Isolate | Unclassified |
| 174 | 2619619003 | Frankia sp. CpI1-P | Isolate | Nodule |
| 175 | 2626541554 | Frankia sp. AvcI.1 | Isolate | Nodule |
| 176 | 2684623035 | Frankia sp. NRRL B-16219 | Isolate | Rhizosphere |
| 177 | 2687453743 | Frankia colletiae Cc1.17 | Isolate | Nodule |
| 178 | 2795385470 | Labedaea rhizosphaerae DSM 45361 | Isolate | Rhizosphere |
| 179 | 2795385472 | Herbihabitans rhizosphaerae DSM 101727 | Isolate | Rhizosphere |
| 180 | 2891326441 | Actinokineospora pegani TRM65233 | Isolate | Unclassified |
| 181 | 2895880812 | Frankia sp. BMG5.11 | Isolate | Unclassified |
| 182 | 8053945823 | Actinomadura terrae OS3-83 | Isolate | Rhizosphere |
| 183 | 8054913762 | Frankia gtarii Agncl-10 | Isolate | Nodule |
| 184 | 8054920844 | Frankia tisae Agncl-8 | Isolate | Nodule |
| 185 | 8055157932 | Frankia umida Ag45/Mut15 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 91.24 |
| Metatranscriptomes | 1.38 |
| Isolates | 7.37 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 5.07 |
| Nodule | 2.76 |
| Rhizoplane | 6.45 |
| Rhizosphere | 76.96 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI24738J21930_10008260 | 3300002075 | Bacteria | 2371 |
| 2 | JGI24744J21845_10000106 | 3300002077 | Bacteria | 11254 |
| 3 | JGI24034J26672_10013658 | 3300002239 | Bacteria | 1234 |
| 4 | JGI24742J22300_10001213 | 3300002244 | Bacteria | 4033 |
| 5 | Ga0058859_11799180 | 3300004798 | Archaea | 5101 |
| 6 | Ga0058860_12209521 | 3300004801 | Archaea | 5703 |
| 7 | Ga0058862_12722834 | 3300004803 | Archaea | 5771 |
| 8 | Ga0070658_10006229 | 3300005327 | Bacteria | 9667 |
| 9 | Ga0070658_10134075 | 3300005327 | Bacteria | 2065 |
| 10 | Ga0070676_10039251 | 3300005328 | Bacteria | 2737 |
| 11 | Ga0070683_100245883 | 3300005329 | Bacteria | 1702 |
| 12 | Ga0070690_100039796 | 3300005330 | Bacteria | 2971 |
| 13 | Ga0070670_100067165 | 3300005331 | Bacteria | 3077 |
| 14 | Ga0070680_100300288 | 3300005336 | Bacteria | 1362 |
| 15 | Ga0068868_100000621 | 3300005338 | Bacteria | 23844 |
| 16 | Ga0070660_100113146 | 3300005339 | Bacteria | 2161 |
| 17 | Ga0070660_100212292 | 3300005339 | Bacteria | 1572 |
| 18 | Ga0070691_10001392 | 3300005341 | Bacteria | 10332 |
| 19 | Ga0070675_100237747 | 3300005354 | Bacteria | 1591 |
| 20 | Ga0070675_100322543 | 3300005354 | Bacteria | 1365 |
| 21 | Ga0070673_100051674 | 3300005364 | Bacteria | 3221 |
| 22 | Ga0070673_100244519 | 3300005364 | Bacteria | 1561 |
| 23 | Ga0070659_100120986 | 3300005366 | Bacteria | 2120 |
| 24 | Ga0070667_100006780 | 3300005367 | Bacteria | 9511 |
| 25 | Ga0070667_100163320 | 3300005367 | Bacteria | 1963 |
| 26 | Ga0070709_10007695 | 3300005434 | Bacteria | 5914 |
| 27 | Ga0070710_10007287 | 3300005437 | Bacteria | 5351 |
| 28 | Ga0070705_100212002 | 3300005440 | Bacteria | 1336 |
| 29 | Ga0070700_100018368 | 3300005441 | Bacteria | 4019 |
| 30 | Ga0070678_100007240 | 3300005456 | Bacteria | 6568 |
| 31 | Ga0070681_10005806 | 3300005458 | Bacteria | 11943 |
| 32 | Ga0068867_100035854 | 3300005459 | Bacteria | 3599 |
| 33 | Ga0070685_10294450 | 3300005466 | Bacteria | 1091 |
| 34 | Ga0070679_100004876 | 3300005530 | Bacteria | 12377 |
| 35 | Ga0070679_100012951 | 3300005530 | Bacteria | 7988 |
| 36 | Ga0070684_100059998 | 3300005535 | Bacteria | 3326 |
| 37 | Ga0068853_100094631 | 3300005539 | Bacteria | 2632 |
| 38 | Ga0070672_100021685 | 3300005543 | Bacteria | 4704 |
| 39 | Ga0070695_100166131 | 3300005545 | Bacteria | 1553 |
| 40 | Ga0070696_100067200 | 3300005546 | Bacteria | 2515 |
| 41 | Ga0070693_100076374 | 3300005547 | Bacteria | 1985 |
| 42 | Ga0068855_100028757 | 3300005563 | Bacteria | 6650 |
| 43 | Ga0068855_100178115 | 3300005563 | Bacteria | 2404 |
| 44 | Ga0068855_100322161 | 3300005563 | Bacteria | 1708 |
| 45 | Ga0068854_100001213 | 3300005578 | Bacteria | 15465 |
| 46 | Ga0068856_100353472 | 3300005614 | Bacteria | 1488 |
| 47 | Ga0068852_100010927 | 3300005616 | Bacteria | 6805 |
| 48 | Ga0068859_100060198 | 3300005617 | Bacteria | 3826 |
| 49 | Ga0068864_100461069 | 3300005618 | Bacteria | 1217 |
| 50 | Ga0068864_100602891 | 3300005618 | Bacteria | 1066 |
| 51 | Ga0068863_100391405 | 3300005841 | Bacteria | 1358 |
| 52 | Ga0068858_100038082 | 3300005842 | Bacteria | 4460 |
| 53 | Ga0068860_100003769 | 3300005843 | Bacteria | 15595 |
| 54 | Ga0068862_100204109 | 3300005844 | Bacteria | 1783 |
| 55 | Ga0081455_10200013 | 3300005937 | Bacteria | 1497 |
| 56 | Ga0070717_10008044 | 3300006028 | Bacteria | 7860 |
| 57 | Ga0068871_100291805 | 3300006358 | Bacteria | 1429 |
| 58 | Ga0075430_100209552 | 3300006846 | Bacteria | 1617 |
| 59 | Ga0068865_100022399 | 3300006881 | Bacteria | 4122 |
| 60 | Ga0097620_100060198 | 3300006931 | Bacteria | 3826 |
| 61 | Ga0111539_10093095 | 3300009094 | Archaea | 3541 |
| 62 | Ga0105245_10005075 | 3300009098 | Bacteria | 11573 |
| 63 | Ga0105247_10000013 | 3300009101 | Bacteria | 287863 |
| 64 | Ga0105247_10041137 | 3300009101 | Bacteria | 2827 |
| 65 | Ga0105247_10052442 | 3300009101 | Bacteria | 2515 |
| 66 | Ga0105243_10002770 | 3300009148 | Bacteria | 14577 |
| 67 | Ga0105241_10216989 | 3300009174 | Bacteria | 1606 |
| 68 | Ga0105242_10008515 | 3300009176 | Bacteria | 7877 |
| 69 | Ga0105242_10098823 | 3300009176 | Bacteria | 2469 |
| 70 | Ga0105248_10021138 | 3300009177 | Bacteria | 7211 |
| 71 | Ga0105248_10029626 | 3300009177 | Bacteria | 6106 |
| 72 | Ga0105248_10482530 | 3300009177 | Bacteria | 1397 |
| 73 | Ga0105249_10028196 | 3300009553 | Bacteria | 5069 |
| 74 | Ga0105239_10482650 | 3300010375 | Bacteria | 1408 |
| 75 | Ga0157370_10042808 | 3300013104 | Bacteria | 4361 |
| 76 | Ga0157369_10024454 | 3300013105 | Bacteria | 6719 |
| 77 | Ga0157369_10312971 | 3300013105 | Bacteria | 1632 |
| 78 | Ga0157374_10016033 | 3300013296 | Bacteria | 6583 |
| 79 | Ga0157378_10094629 | 3300013297 | Bacteria | 2720 |
| 80 | Ga0163162_10033990 | 3300013306 | Bacteria | 5071 |
| 81 | Ga0157372_10092196 | 3300013307 | Bacteria | 3446 |
| 82 | Ga0157375_10001558 | 3300013308 | Bacteria | 19744 |
| 83 | Ga0157375_10169490 | 3300013308 | Bacteria | 2330 |
| 84 | Ga0163163_10174637 | 3300014325 | Bacteria | 2195 |
| 85 | Ga0157380_10109042 | 3300014326 | Bacteria | 2322 |
| 86 | Ga0157377_10094639 | 3300014745 | Bacteria | 1770 |
| 87 | Ga0157379_10005205 | 3300014968 | Bacteria | 11173 |
| 88 | Ga0157379_10069757 | 3300014968 | Bacteria | 3144 |
| 89 | Ga0163161_10002157 | 3300017792 | Bacteria | 14193 |
| 90 | Ga0207692_10132733 | 3300025898 | Bacteria | 1408 |
| 91 | Ga0207642_10004384 | 3300025899 | Bacteria | 4551 |
| 92 | Ga0207710_10000030 | 3300025900 | Bacteria | 287870 |
| 93 | Ga0207688_10001359 | 3300025901 | Bacteria | 12713 |
| 94 | Ga0207688_10066884 | 3300025901 | Archaea | 2033 |
| 95 | Ga0207647_10014973 | 3300025904 | Bacteria | 5330 |
| 96 | Ga0207685_10049018 | 3300025905 | Bacteria | 1620 |
| 97 | Ga0207645_10063840 | 3300025907 | Bacteria | 2353 |
| 98 | Ga0207705_10007487 | 3300025909 | Bacteria | 8024 |
| 99 | Ga0207707_10118651 | 3300025912 | Bacteria | 2312 |
| 100 | Ga0207693_10003091 | 3300025915 | Bacteria | 14345 |
| 101 | Ga0207663_10048391 | 3300025916 | Bacteria | 2631 |
| 102 | Ga0207662_10024449 | 3300025918 | Bacteria | 3476 |
| 103 | Ga0207662_10282271 | 3300025918 | Bacteria | 1099 |
| 104 | Ga0207657_10034135 | 3300025919 | Bacteria | 4579 |
| 105 | Ga0207657_10048680 | 3300025919 | Bacteria | 3699 |
| 106 | Ga0207652_10022079 | 3300025921 | Bacteria | 5261 |
| 107 | Ga0207694_10210517 | 3300025924 | Bacteria | 1584 |
| 108 | Ga0207687_10056323 | 3300025927 | Bacteria | 2758 |
| 109 | Ga0207644_10059778 | 3300025931 | Bacteria | 2757 |
| 110 | Ga0207706_10022827 | 3300025933 | Bacteria | 5614 |
| 111 | Ga0207686_10074716 | 3300025934 | Bacteria | 2191 |
| 112 | Ga0207670_10043248 | 3300025936 | Bacteria | 2973 |
| 113 | Ga0207669_10002020 | 3300025937 | Bacteria | 8606 |
| 114 | Ga0207704_10000821 | 3300025938 | Bacteria | 13725 |
| 115 | Ga0207665_10063710 | 3300025939 | Bacteria | 2504 |
| 116 | Ga0207691_10035677 | 3300025940 | Bacteria | 4614 |
| 117 | Ga0207691_10092003 | 3300025940 | Bacteria | 2716 |
| 118 | Ga0207711_10048125 | 3300025941 | Bacteria | 3648 |
| 119 | Ga0207711_10083524 | 3300025941 | Bacteria | 2794 |
| 120 | Ga0207711_10110887 | 3300025941 | Bacteria | 2440 |
| 121 | Ga0207711_10162048 | 3300025941 | Bacteria | 2025 |
| 122 | Ga0207689_10032496 | 3300025942 | Bacteria | 4341 |
| 123 | Ga0207661_10235710 | 3300025944 | Bacteria | 1622 |
| 124 | Ga0207667_10039750 | 3300025949 | Bacteria | 5011 |
| 125 | Ga0207651_10039428 | 3300025960 | Bacteria | 3115 |
| 126 | Ga0207712_10023416 | 3300025961 | Bacteria | 4075 |
| 127 | Ga0207668_10029044 | 3300025972 | Bacteria | 3621 |
| 128 | Ga0207668_10188528 | 3300025972 | Bacteria | 1632 |
| 129 | Ga0207640_10003781 | 3300025981 | Bacteria | 8154 |
| 130 | Ga0207678_10030034 | 3300026067 | Bacteria | 4745 |
| 131 | Ga0207708_10011544 | 3300026075 | Bacteria | 6582 |
| 132 | Ga0207641_10472807 | 3300026088 | Bacteria | 1214 |
| 133 | Ga0207648_10003891 | 3300026089 | Bacteria | 15584 |
| 134 | Ga0207676_10589556 | 3300026095 | Bacteria | 1066 |
| 135 | Ga0207675_100200030 | 3300026118 | Bacteria | 1919 |
| 136 | Ga0207683_10003144 | 3300026121 | Bacteria | 14426 |
| 137 | Ga0207683_10021329 | 3300026121 | Bacteria | 5544 |
| 138 | Ga0268266_10106815 | 3300028379 | Bacteria | 2475 |
| 139 | Ga0268266_10137899 | 3300028379 | Bacteria | 2187 |
| 140 | Ga0268265_10012791 | 3300028380 | Bacteria | 5697 |
| 141 | Ga0268264_10003207 | 3300028381 | Bacteria | 14168 |
| 142 | Ga0307515_10140316 | 3300028794 | Bacteria | 2597 |
| 143 | Ga0307513_10005153 | 3300031456 | Bacteria | 17303 |
| 144 | Ga0307509_10000884 | 3300031507 | Bacteria | 51433 |
| 145 | Ga0307509_10045034 | 3300031507 | Bacteria | 4763 |
| 146 | Ga0307514_10162724 | 3300031649 | Bacteria | 1474 |
| 147 | Ga0316579_10000175 | 3300031691 | Bacteria | 18755 |
| 148 | Ga0307516_10043248 | 3300031730 | Bacteria | 4465 |
| 149 | Ga0307414_10343448 | 3300032004 | Bacteria | 1279 |
| 150 | Ga0307507_10055543 | 3300033179 | Bacteria | 3752 |
| 151 | Ga0373936_0000006 | 3300035113 | Bacteria | 318697 |
| 152 | Ga0373939_0026038 | 3300035114 | Bacteria | 1645 |
| 153 | Ga0451853_2662623 | 3300041512 | Bacteria | 1918 |
| 154 | Ga0451577_0226734 | 3300042876 | Bacteria | 1689 |
| 155 | Ga0466963_0036680 | 3300044694 | Bacteria | 3198 |
| 156 | Ga0466963_0101860 | 3300044694 | Bacteria | 1966 |
| 157 | Ga0466970_0160894 | 3300044765 | Bacteria | 1242 |
| 158 | Ga0466959_0085865 | 3300045049 | Bacteria | 2264 |
| 159 | Ga0466958_0050634 | 3300045836 | Bacteria | 2514 |
| 160 | Ga0466967_0096773 | 3300045976 | Bacteria | 2693 |
| 161 | Ga0495650_0062424 | 3300046471 | Bacteria | 1489 |
| 162 | Ga0495586_0012955 | 3300046535 | Bacteria | 4420 |
| 163 | Ga0496100_0371532 | 3300048903 | Bacteria | 1084 |
| 164 | Ga0496101_0007267 | 3300048904 | Bacteria | 7167 |
| 165 | Ga0496105_0066405 | 3300048908 | Bacteria | 2978 |
| 166 | Ga0496106_0002908 | 3300048909 | Bacteria | 12741 |
| 167 | Ga0496106_0003205 | 3300048909 | Bacteria | 12248 |
| 168 | Ga0496107_0024940 | 3300048910 | Bacteria | 4232 |
| 169 | Ga0496108_0002989 | 3300048911 | Bacteria | 13582 |
| 170 | Ga0496109_0000883 | 3300048912 | Bacteria | 25040 |
| 171 | Ga0496110_0013171 | 3300048913 | Bacteria | 6829 |
| 172 | Ga0496111_0090328 | 3300048914 | Bacteria | 2244 |
| 173 | Ga0496113_0108324 | 3300048916 | Bacteria | 2160 |
| 174 | Ga0496114_0032944 | 3300048917 | Bacteria | 4267 |
| 175 | Ga0496115_0001737 | 3300048918 | Bacteria | 15625 |
| 176 | Ga0496115_0110888 | 3300048918 | Bacteria | 2254 |
| 177 | Ga0496119_0000169 | 3300048922 | Bacteria | 91606 |
| 178 | Ga0496120_0000325 | 3300048923 | Bacteria | 79080 |
| 179 | Ga0496122_0139716 | 3300048925 | Bacteria | 1518 |
| 180 | Ga0501034_0098461 | 3300049571 | Bacteria | 2920 |
| 181 | Ga0501037_0207177 | 3300049573 | Archaea | 1384 |
| 182 | Ga0501039_0264030 | 3300049575 | Bacteria | 1353 |
| 183 | Ga0501042_0121483 | 3300049578 | Archaea | 1881 |
| 184 | Ga0501046_0148876 | 3300049580 | Bacteria | 1767 |
| 185 | Ga0501047_0049500 | 3300049581 | Bacteria | 4058 |
| 186 | Ga0501080_0009777 | 3300049742 | Bacteria | 8761 |
| 187 | Ga0501044_0071211 | 3300049823 | Bacteria | 3535 |
| 188 | nmdc:mga09592_33979_c1 | 3300050508 | Bacteria | 4261 |
| 189 | Ga0495619_0140064 | 3300053085 | Bacteria | 1665 |
| 190 | Ga0500566_0003588 | 3300053094 | Bacteria | 9248 |
| 191 | Ga0500566_0006233 | 3300053094 | Bacteria | 7088 |
| 192 | Ga0500640_003696 | 3300053095 | Bacteria | 5411 |
| 193 | Ga0500554_000019 | 3300053102 | Bacteria | 27237 |
| 194 | Ga0500595_000087 | 3300053119 | Bacteria | 65306 |
| 195 | Ga0500597_016264 | 3300053120 | Bacteria | 2833 |
| 196 | Ga0500614_000683 | 3300053123 | Bacteria | 8683 |
| 197 | Ga0500585_092524 | 3300053144 | Bacteria | 1092 |
| 198 | Ga0500603_005714 | 3300053150 | Bacteria | 2686 |
| 199 | Ga0500616_0002287 | 3300053153 | Bacteria | 16225 |
| 200 | Ga0500637_0128831 | 3300053178 | Bacteria | 1468 |
| 201 | Ga0501084_0029881 | 3300054114 | Bacteria | 4558 |
| 202 | 2644514850 | 2643221692 | Bacteria | 7282860 |
| 203 | 2558912151 | 2558860112 | Bacteria | 9931328 |
| 204 | 2579853887 | 2579778521 | Bacteria | 7624758 |
| 205 | 2619853363 | 2619618881 | Bacteria | 7521104 |
| 206 | 2620350191 | 2619619003 | Bacteria | 7619552 |
| 207 | 2626634019 | 2626541554 | Bacteria | 7741902 |
| 208 | 2686538663 | 2684623035 | Bacteria | 8032739 |
| 209 | 2689990239 | 2687453743 | Bacteria | 8361025 |
| 210 | 2795785583 | 2795385470 | Bacteria | 8317180 |
| 211 | 2795795086 | 2795385472 | Bacteria | 6627535 |
| 212 | 2891327322 | 2891326441 | Bacteria | 6439512 |
| 213 | 2895887454 | 2895880812 | Bacteria | 11255272 |
| 214 | 8053953026 | 8053945823 | Bacteria | 8962862 |
| 215 | 8054913837 | 8054913762 | Bacteria | 7713009 |
| 216 | 8054920956 | 8054920844 | Bacteria | 7068637 |
| 217 | 8055161758 | 8055157932 | Bacteria | 6429399 |
| 218 | JGI24738J21930_10008260 | |||
| 219 | JGI24744J21845_10000106 | |||
| 220 | JGI24034J26672_10013658 | |||
| 221 | JGI24742J22300_10001213 | |||
| 222 | Ga0058859_11799180 | |||
| 223 | Ga0058860_12209521 | |||
| 224 | Ga0058862_12722834 | |||
| 225 | Ga0070658_10006229 | |||
| 226 | Ga0070658_10134075 | |||
| 227 | Ga0070676_10039251 | |||
| 228 | Ga0070683_100245883 | |||
| 229 | Ga0070690_100039796 | |||
| 230 | Ga0070670_100067165 | |||
| 231 | Ga0070680_100300288 | |||
| 232 | Ga0068868_100000621 | |||
| 233 | Ga0070660_100113146 | |||
| 234 | Ga0070660_100212292 | |||
| 235 | Ga0070691_10001392 | |||
| 236 | Ga0070675_100237747 | |||
| 237 | Ga0070675_100322543 | |||
| 238 | Ga0070673_100051674 | |||
| 239 | Ga0070673_100244519 | |||
| 240 | Ga0070659_100120986 | |||
| 241 | Ga0070667_100006780 | |||
| 242 | Ga0070667_100163320 | |||
| 243 | Ga0070709_10007695 | |||
| 244 | Ga0070710_10007287 | |||
| 245 | Ga0070705_100212002 | |||
| 246 | Ga0070700_100018368 | |||
| 247 | Ga0070678_100007240 | |||
| 248 | Ga0070681_10005806 | |||
| 249 | Ga0068867_100035854 | |||
| 250 | Ga0070685_10294450 | |||
| 251 | Ga0070679_100004876 | |||
| 252 | Ga0070679_100012951 | |||
| 253 | Ga0070684_100059998 | |||
| 254 | Ga0068853_100094631 | |||
| 255 | Ga0070672_100021685 | |||
| 256 | Ga0070695_100166131 | |||
| 257 | Ga0070696_100067200 | |||
| 258 | Ga0070693_100076374 | |||
| 259 | Ga0068855_100028757 | |||
| 260 | Ga0068855_100178115 | |||
| 261 | Ga0068855_100322161 | |||
| 262 | Ga0068854_100001213 | |||
| 263 | Ga0068856_100353472 | |||
| 264 | Ga0068852_100010927 | |||
| 265 | Ga0068859_100060198 | |||
| 266 | Ga0068864_100461069 | |||
| 267 | Ga0068864_100602891 | |||
| 268 | Ga0068863_100391405 | |||
| 269 | Ga0068858_100038082 | |||
| 270 | Ga0068860_100003769 | |||
| 271 | Ga0068862_100204109 | |||
| 272 | Ga0081455_10200013 | |||
| 273 | Ga0070717_10008044 | |||
| 274 | Ga0068871_100291805 | |||
| 275 | Ga0075430_100209552 | |||
| 276 | Ga0068865_100022399 | |||
| 277 | Ga0097620_100060198 | |||
| 278 | Ga0111539_10093095 | |||
| 279 | Ga0105245_10005075 | |||
| 280 | Ga0105247_10000013 | |||
| 281 | Ga0105247_10041137 | |||
| 282 | Ga0105247_10052442 | |||
| 283 | Ga0105243_10002770 | |||
| 284 | Ga0105241_10216989 | |||
| 285 | Ga0105242_10008515 | |||
| 286 | Ga0105242_10098823 | |||
| 287 | Ga0105248_10021138 | |||
| 288 | Ga0105248_10029626 | |||
| 289 | Ga0105248_10482530 | |||
| 290 | Ga0105249_10028196 | |||
| 291 | Ga0105239_10482650 | |||
| 292 | Ga0157370_10042808 | |||
| 293 | Ga0157369_10024454 | |||
| 294 | Ga0157369_10312971 | |||
| 295 | Ga0157374_10016033 | |||
| 296 | Ga0157378_10094629 | |||
| 297 | Ga0163162_10033990 | |||
| 298 | Ga0157372_10092196 | |||
| 299 | Ga0157375_10001558 | |||
| 300 | Ga0157375_10169490 | |||
| 301 | Ga0163163_10174637 | |||
| 302 | Ga0157380_10109042 | |||
| 303 | Ga0157377_10094639 | |||
| 304 | Ga0157379_10005205 | |||
| 305 | Ga0157379_10069757 | |||
| 306 | Ga0163161_10002157 | |||
| 307 | Ga0207692_10132733 | |||
| 308 | Ga0207642_10004384 | |||
| 309 | Ga0207710_10000030 | |||
| 310 | Ga0207688_10001359 | |||
| 311 | Ga0207688_10066884 | |||
| 312 | Ga0207647_10014973 | |||
| 313 | Ga0207685_10049018 | |||
| 314 | Ga0207645_10063840 | |||
| 315 | Ga0207705_10007487 | |||
| 316 | Ga0207707_10118651 | |||
| 317 | Ga0207693_10003091 | |||
| 318 | Ga0207663_10048391 | |||
| 319 | Ga0207662_10024449 | |||
| 320 | Ga0207662_10282271 | |||
| 321 | Ga0207657_10034135 | |||
| 322 | Ga0207657_10048680 | |||
| 323 | Ga0207652_10022079 | |||
| 324 | Ga0207694_10210517 | |||
| 325 | Ga0207687_10056323 | |||
| 326 | Ga0207644_10059778 | |||
| 327 | Ga0207706_10022827 | |||
| 328 | Ga0207686_10074716 | |||
| 329 | Ga0207670_10043248 | |||
| 330 | Ga0207669_10002020 | |||
| 331 | Ga0207704_10000821 | |||
| 332 | Ga0207665_10063710 | |||
| 333 | Ga0207691_10035677 | |||
| 334 | Ga0207691_10092003 | |||
| 335 | Ga0207711_10048125 | |||
| 336 | Ga0207711_10083524 | |||
| 337 | Ga0207711_10110887 | |||
| 338 | Ga0207711_10162048 | |||
| 339 | Ga0207689_10032496 | |||
| 340 | Ga0207661_10235710 | |||
| 341 | Ga0207667_10039750 | |||
| 342 | Ga0207651_10039428 | |||
| 343 | Ga0207712_10023416 | |||
| 344 | Ga0207668_10029044 | |||
| 345 | Ga0207668_10188528 | |||
| 346 | Ga0207640_10003781 | |||
| 347 | Ga0207678_10030034 | |||
| 348 | Ga0207708_10011544 | |||
| 349 | Ga0207641_10472807 | |||
| 350 | Ga0207648_10003891 | |||
| 351 | Ga0207676_10589556 | |||
| 352 | Ga0207675_100200030 | |||
| 353 | Ga0207683_10003144 | |||
| 354 | Ga0207683_10021329 | |||
| 355 | Ga0268266_10106815 | |||
| 356 | Ga0268266_10137899 | |||
| 357 | Ga0268265_10012791 | |||
| 358 | Ga0268264_10003207 | |||
| 359 | Ga0307515_10140316 | |||
| 360 | Ga0307513_10005153 | |||
| 361 | Ga0307509_10000884 | |||
| 362 | Ga0307509_10045034 | |||
| 363 | Ga0307514_10162724 | |||
| 364 | Ga0316579_10000175 | |||
| 365 | Ga0307516_10043248 | |||
| 366 | Ga0307414_10343448 | |||
| 367 | Ga0307507_10055543 | |||
| 368 | Ga0373936_0000006 | |||
| 369 | Ga0373939_0026038 | |||
| 370 | Ga0451853_2662623 | |||
| 371 | Ga0451577_0226734 | |||
| 372 | Ga0466963_0036680 | |||
| 373 | Ga0466963_0101860 | |||
| 374 | Ga0466970_0160894 | |||
| 375 | Ga0466959_0085865 | |||
| 376 | Ga0466958_0050634 | |||
| 377 | Ga0466967_0096773 | |||
| 378 | Ga0495650_0062424 | |||
| 379 | Ga0495586_0012955 | |||
| 380 | Ga0496100_0371532 | |||
| 381 | Ga0496101_0007267 | |||
| 382 | Ga0496105_0066405 | |||
| 383 | Ga0496106_0002908 | |||
| 384 | Ga0496106_0003205 | |||
| 385 | Ga0496107_0024940 | |||
| 386 | Ga0496108_0002989 | |||
| 387 | Ga0496109_0000883 | |||
| 388 | Ga0496110_0013171 | |||
| 389 | Ga0496111_0090328 | |||
| 390 | Ga0496113_0108324 | |||
| 391 | Ga0496114_0032944 | |||
| 392 | Ga0496115_0001737 | |||
| 393 | Ga0496115_0110888 | |||
| 394 | Ga0496119_0000169 | |||
| 395 | Ga0496120_0000325 | |||
| 396 | Ga0496122_0139716 | |||
| 397 | Ga0501034_0098461 | |||
| 398 | Ga0501037_0207177 | |||
| 399 | Ga0501039_0264030 | |||
| 400 | Ga0501042_0121483 | |||
| 401 | Ga0501046_0148876 | |||
| 402 | Ga0501047_0049500 | |||
| 403 | Ga0501080_0009777 | |||
| 404 | Ga0501044_0071211 | |||
| 405 | nmdc:mga09592_33979_c1 | |||
| 406 | Ga0495619_0140064 | |||
| 407 | Ga0500566_0003588 | |||
| 408 | Ga0500566_0006233 | |||
| 409 | Ga0500640_003696 | |||
| 410 | Ga0500554_000019 | |||
| 411 | Ga0500595_000087 | |||
| 412 | Ga0500597_016264 | |||
| 413 | Ga0500614_000683 | |||
| 414 | Ga0500585_092524 | |||
| 415 | Ga0500603_005714 | |||
| 416 | Ga0500616_0002287 | |||
| 417 | Ga0500637_0128831 | |||
| 418 | Ga0501084_0029881 | |||
| 419 | 2644514850 | |||
| 420 | 2558912151 | |||
| 421 | 2579853887 | |||
| 422 | 2619853363 | |||
| 423 | 2620350191 | |||
| 424 | 2626634019 | |||
| 425 | 2686538663 | |||
| 426 | 2689990239 | |||
| 427 | 2795785583 | |||
| 428 | 2795795086 | |||
| 429 | 2891327322 | |||
| 430 | 2895887454 | |||
| 431 | 8053953026 | |||
| 432 | 8054913837 | |||
| 433 | 8054920956 | |||
| 434 | 8055161758 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 3p32-assembly1.cif.gz_A-2 | hydrolysis of gtp to gdp by an mcm-associated and meab- and mmaa-like g-protein from mycobacterium tuberculosis | 0.9366 | 5 | 324 |
| 4gt1-assembly1.cif.gz_A-2 | crystal structure of a meab- and mmaa-like gtpase from mycobacterium tuberculosis bound to 2'-deoxyguanosine diphosphate | 0.9347 | 5 | 324 |
| 3md0-assembly1.cif.gz_A-2 | crystal structure of arginine/ornithine transport system atpase from mycobacterium tuberculosis bound to gdp (a ras-like gtpase superfamily protein) | 0.9318 | 5 | 324 |
| 4lc1-assembly1.cif.gz_B | meab, a bacterial homolog of mmaa, bound to gdp and crystallized in the presence of gdp and [alf4]- | 0.9273 | 1 | 324 |
| 2qm7-assembly1.cif.gz_B | meab, a bacterial homolog of mmaa, bound to gdp | 0.927 | 5 | 321 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3p32A01 | Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; | 1.008 | 5 | 49 | 1.20.5.170 |
| 3md0A01 | Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; | 1.001 | 5 | 49 | 1.20.5.170 |
| 3p32A01 | Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; | 0.9646 | 5 | 49 | 1.20.5.170 |
| 3md0A01 | Mainly Alpha;Up-down Bundle;Single alpha-helices involved in coiled-coils or other helix-helix interfaces; | 0.9585 | 5 | 49 | 1.20.5.170 |
| 4lc1B02 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases | 0.9482 | 50 | 259 | 3.40.50.300 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A375YL54-F1-model_v4 | Putative transport system kinase [Mycobacterium tuberculosis H37Rv] | 0.9511 | 1 | 326 |
GO:0003924
GO:0005525 GO:0005737 GO:0016301 GO:0016887 |
| AF-A0A2G9ZV84-F1-model_v4 | Methylmalonyl Co-A mutase-associated GTPase MeaB | 0.9504 | 1 | 287 |
GO:0003924
GO:0005525 GO:0005737 |
| AF-A0A2G6KQH4-F1-model_v4 | Methylmalonyl Co-A mutase-associated GTPase MeaB | 0.9501 | 9 | 239 |
GO:0003924
GO:0005525 GO:0005737 |
| AF-A0A2G6E0F6-F1-model_v4 | Methylmalonyl Co-A mutase-associated GTPase MeaB | 0.9498 | 5 | 287 |
GO:0003924
GO:0005525 GO:0005737 |
| AF-A0A375YL54-F1-model_v4 | Putative transport system kinase [Mycobacterium tuberculosis H37Rv] | 0.9483 | 1 | 326 |
GO:0003924
GO:0005525 GO:0005737 GO:0016301 GO:0016887 |