F328840
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 217 | 163 | 434 | 506 |
Family's Representative Sequence
| Representative Sequence | 3300025914|Ga0207671_10075437|Ga0207671_100754372 |
| Length | 542 |
| Sequence | MISNLFRDRPIAVIGAGVMGVGIAQVALLSGHPVRLLDAREGAAEAAATQLRGTLQKLAVKGRLGAAEVDAALSRLRVATALAELGDSALVIEAIVEKLDVKQALLRELEAVVSDDVVLASNTSSISITALARGLRRPGRVVGMHFFNPVPLMKLVEVVSGLETERGVAESIHVLARDWGKVAVDAKSTPGFIVNRIARPYYAETLALLQEQAAPPAAVDACLRGAGFRMGPCELMDLIGHDTNYNVTQSVFEANFFDKRYQPSLVQRELVEGGRLGRKSGQGFYRYVDGAAVDGALPDEAVAAIGDARALAGQRIVLHGTGDIVELLAQRLEVGGLRFTRAAAPEQTLAGHAGIAGGPAREPVVALRLGDALLMPTDGRTATECAATLGTPDVALFDWPIGPAATAGAGAASTLAFAVADQAGDDLAPRVADLVRRLGWQPRRIADAPGLVVARTLAMLVNEACDAVEQGVCDPAGADVAMTLGVNYPEGPFAWLAQCGAARIARLLDALDVHYRGERYRVSPRLRRMAWSMSAPAAPGAR |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 2 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 3 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 4 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 5 | 3300003320 | Sugarcane root Sample H2 | Metagenome | Unclassified |
| 6 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 7 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 8 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 9 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 10 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 11 | 3300003794 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 | Metagenome | Endosphere |
| 12 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005330 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG | Metagenome | Rhizosphere |
| 14 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 17 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 18 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 24 | 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Metagenome | Rhizosphere |
| 25 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 26 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 28 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 29 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 30 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 31 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 32 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 33 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 34 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 35 | 3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 37 | 3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Metagenome | Rhizosphere |
| 38 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 39 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 50 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 55 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 56 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 58 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 60 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025893 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025926 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 86 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 87 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 88 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 89 | 3300030522 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM | Metagenome | Unclassified |
| 90 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 91 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 92 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 93 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 94 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 95 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 96 | 3300031649 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM | Metagenome | Unclassified |
| 97 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 98 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 99 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 100 | 3300033179 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM | Metagenome | Unclassified |
| 101 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 102 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 103 | 3300035241 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 | Metagenome | Rhizosphere |
| 104 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 105 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 106 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 107 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 108 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 109 | 3300042120 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 | Metagenome | Rhizosphere |
| 110 | 3300042126 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0218F_E14_070516_87 | Metagenome | Rhizosphere |
| 111 | 3300042130 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030L_E14_070516_97 | Metagenome | Rhizosphere |
| 112 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 113 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 114 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 115 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 116 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 117 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 118 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 119 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 120 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 121 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046461 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046471 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046520 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046523 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046530 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 135 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 136 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 137 | 3300047469 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere | Metagenome | Rhizosphere |
| 138 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 139 | 3300048091 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere | Metagenome | Rhizosphere |
| 140 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 141 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 142 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 143 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 144 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 145 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 146 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 147 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 148 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 149 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 150 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 151 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 152 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 153 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 154 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 155 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 156 | 3300053118 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere | Metagenome | Endosphere |
| 157 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 158 | 3300053146 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere | Metagenome | Endosphere |
| 159 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 160 | 2643221644 | Rhizobacter sp. Root1221 | Isolate | Unclassified |
| 161 | 2643221660 | Methylibium sp. Root1272 | Isolate | Unclassified |
| 162 | 2831864461 | Roseateles noduli HZ7 | Isolate | Nodule |
| 163 | 3002998708 | Actinomadura barringtoniae GKU 128 | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 98.16 |
| Metatranscriptomes | 0 |
| Isolates | 1.84 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 15.21 |
| Nodule | 0.46 |
| Rhizoplane | 1.84 |
| Rhizosphere | 68.66 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0207671_10075437 | 3300025914 | Bacteria | 2522 |
| 2 | JGI25156J39149_1000213 | 3300002705 | Bacteria | 40359 |
| 3 | JGI25157J39369_1000131 | 3300002741 | Bacteria | 62712 |
| 4 | rootH1_10007996 | 3300003316 | Bacteria | 3903 |
| 5 | rootH2_10018917 | 3300003320 | Bacteria | 9441 |
| 6 | Ga0055539_1000174 | 3300003752 | Bacteria | 54849 |
| 7 | Ga0055539_1001109 | 3300003752 | Bacteria | 5578 |
| 8 | Ga0055533_1000011 | 3300003756 | Bacteria | 467893 |
| 9 | Ga0055525_1000056 | 3300003759 | Bacteria | 212321 |
| 10 | Ga0055525_1000844 | 3300003759 | Bacteria | 9130 |
| 11 | Ga0055535_1000302 | 3300003761 | Bacteria | 50219 |
| 12 | Ga0055529_1000306 | 3300003763 | Bacteria | 56382 |
| 13 | Ga0055531_10000031 | 3300003794 | Bacteria | 156686 |
| 14 | Ga0070658_10132261 | 3300005327 | Bacteria | 2080 |
| 15 | Ga0070690_100007347 | 3300005330 | Bacteria | 6306 |
| 16 | Ga0070690_100062681 | 3300005330 | Bacteria | 2398 |
| 17 | Ga0070670_100001719 | 3300005331 | Bacteria | 17832 |
| 18 | Ga0070670_100034791 | 3300005331 | Bacteria | 4336 |
| 19 | Ga0070677_10004643 | 3300005333 | Bacteria | 4493 |
| 20 | Ga0068869_100008855 | 3300005334 | Bacteria | 6512 |
| 21 | Ga0070689_100015284 | 3300005340 | Bacteria | 5594 |
| 22 | Ga0070675_100000052 | 3300005354 | Bacteria | 71092 |
| 23 | Ga0070671_100005337 | 3300005355 | Bacteria | 10246 |
| 24 | Ga0070671_100008516 | 3300005355 | Bacteria | 8222 |
| 25 | Ga0070671_100159064 | 3300005355 | Bacteria | 1909 |
| 26 | Ga0070673_100005208 | 3300005364 | Bacteria | 8305 |
| 27 | Ga0070673_100006032 | 3300005364 | Bacteria | 7849 |
| 28 | Ga0070667_100022012 | 3300005367 | Bacteria | 5289 |
| 29 | Ga0070678_100002503 | 3300005456 | Bacteria | 10079 |
| 30 | Ga0070678_100033300 | 3300005456 | Bacteria | 3576 |
| 31 | Ga0068867_100151554 | 3300005459 | Bacteria | 1822 |
| 32 | Ga0070706_100173609 | 3300005467 | Bacteria | 2012 |
| 33 | Ga0070684_100236142 | 3300005535 | Bacteria | 1670 |
| 34 | Ga0070672_100000608 | 3300005543 | Bacteria | 21058 |
| 35 | Ga0068855_100001326 | 3300005563 | Bacteria | 30623 |
| 36 | Ga0068857_100018727 | 3300005577 | Bacteria | 6077 |
| 37 | Ga0068854_100001534 | 3300005578 | Bacteria | 14013 |
| 38 | Ga0068859_100000624 | 3300005617 | Bacteria | 35420 |
| 39 | Ga0068864_100000276 | 3300005618 | Bacteria | 45759 |
| 40 | Ga0068864_100005072 | 3300005618 | Bacteria | 10787 |
| 41 | Ga0068863_100000744 | 3300005841 | Bacteria | 32582 |
| 42 | Ga0068858_100000312 | 3300005842 | Bacteria | 51731 |
| 43 | Ga0075366_10009120 | 3300006195 | Bacteria | 5533 |
| 44 | Ga0075366_10077130 | 3300006195 | Bacteria | 1989 |
| 45 | Ga0097621_100003258 | 3300006237 | Bacteria | 11162 |
| 46 | Ga0097621_100005140 | 3300006237 | Bacteria | 9196 |
| 47 | Ga0075370_10056727 | 3300006353 | Bacteria | 2226 |
| 48 | Ga0075370_10062760 | 3300006353 | Bacteria | 2117 |
| 49 | Ga0068871_100004081 | 3300006358 | Bacteria | 10100 |
| 50 | Ga0075429_100165977 | 3300006880 | Bacteria | 1934 |
| 51 | Ga0097620_100000624 | 3300006931 | Bacteria | 35420 |
| 52 | Ga0105248_10001893 | 3300009177 | Bacteria | 23198 |
| 53 | Ga0105248_10002353 | 3300009177 | Bacteria | 20987 |
| 54 | Ga0105237_10081038 | 3300009545 | Bacteria | 3236 |
| 55 | Ga0105238_10062221 | 3300009551 | Bacteria | 3733 |
| 56 | Ga0105239_10031878 | 3300010375 | Bacteria | 5791 |
| 57 | Ga0157378_10070992 | 3300013297 | Bacteria | 3127 |
| 58 | Ga0163162_10032191 | 3300013306 | Bacteria | 5206 |
| 59 | Ga0163163_10040333 | 3300014325 | Bacteria | 4559 |
| 60 | Ga0157379_10010980 | 3300014968 | Bacteria | 7899 |
| 61 | Ga0157379_10018451 | 3300014968 | Bacteria | 6153 |
| 62 | Ga0157376_10003073 | 3300014969 | Bacteria | 11454 |
| 63 | Ga0213872_10000155 | 3300021361 | Bacteria | 62940 |
| 64 | Ga0209674_100003 | 3300025226 | Bacteria | 2196646 |
| 65 | Ga0209563_100010 | 3300025230 | Bacteria | 1337457 |
| 66 | Ga0209563_100014 | 3300025230 | Bacteria | 940582 |
| 67 | Ga0207427_100256 | 3300025231 | Bacteria | 41755 |
| 68 | Ga0209258_100162 | 3300025242 | Bacteria | 151725 |
| 69 | Ga0209258_101009 | 3300025242 | Bacteria | 12784 |
| 70 | Ga0209646_1000066 | 3300025246 | Bacteria | 244823 |
| 71 | Ga0209026_1000027 | 3300025250 | Bacteria | 351282 |
| 72 | Ga0209677_100083 | 3300025253 | Bacteria | 117063 |
| 73 | Ga0209677_100154 | 3300025253 | Bacteria | 62985 |
| 74 | Ga0209759_1000240 | 3300025256 | Bacteria | 81549 |
| 75 | Ga0209759_1002846 | 3300025256 | Bacteria | 7296 |
| 76 | Ga0209455_1000128 | 3300025272 | Bacteria | 162413 |
| 77 | Ga0209051_1007623 | 3300025303 | Bacteria | 5888 |
| 78 | Ga0209051_1009850 | 3300025303 | Bacteria | 4888 |
| 79 | Ga0209257_1000016 | 3300025304 | Bacteria | 908015 |
| 80 | Ga0207682_10012927 | 3300025893 | Bacteria | 3255 |
| 81 | Ga0207680_10018321 | 3300025903 | Bacteria | 3720 |
| 82 | Ga0207705_10022695 | 3300025909 | Bacteria | 4476 |
| 83 | Ga0207695_10005755 | 3300025913 | Bacteria | 16316 |
| 84 | Ga0207657_10074884 | 3300025919 | Bacteria | 2858 |
| 85 | Ga0207650_10004519 | 3300025925 | Bacteria | 9512 |
| 86 | Ga0207650_10078268 | 3300025925 | Bacteria | 2501 |
| 87 | Ga0207659_10000208 | 3300025926 | Bacteria | 35245 |
| 88 | Ga0207644_10008196 | 3300025931 | Bacteria | 6844 |
| 89 | Ga0207644_10034835 | 3300025931 | Bacteria | 3524 |
| 90 | Ga0207706_10063907 | 3300025933 | Bacteria | 3240 |
| 91 | Ga0207669_10141776 | 3300025937 | Bacteria | 1669 |
| 92 | Ga0207691_10000679 | 3300025940 | Bacteria | 33608 |
| 93 | Ga0207691_10097744 | 3300025940 | Bacteria | 2624 |
| 94 | Ga0207711_10001652 | 3300025941 | Bacteria | 20568 |
| 95 | Ga0207711_10041889 | 3300025941 | Bacteria | 3900 |
| 96 | Ga0207689_10050679 | 3300025942 | Bacteria | 3422 |
| 97 | Ga0207667_10023934 | 3300025949 | Bacteria | 6717 |
| 98 | Ga0207651_10000366 | 3300025960 | Bacteria | 19166 |
| 99 | Ga0207640_10006110 | 3300025981 | Bacteria | 6585 |
| 100 | Ga0207677_10000645 | 3300026023 | Bacteria | 20960 |
| 101 | Ga0207703_10002268 | 3300026035 | Bacteria | 16798 |
| 102 | Ga0207641_10000752 | 3300026088 | Bacteria | 34898 |
| 103 | Ga0207641_10013605 | 3300026088 | Bacteria | 6673 |
| 104 | Ga0207648_10011242 | 3300026089 | Bacteria | 8440 |
| 105 | Ga0207676_10001107 | 3300026095 | Bacteria | 20368 |
| 106 | Ga0207676_10009135 | 3300026095 | Bacteria | 7059 |
| 107 | Ga0207674_10002178 | 3300026116 | Bacteria | 24775 |
| 108 | Ga0207683_10005508 | 3300026121 | Bacteria | 10849 |
| 109 | Ga0207683_10055085 | 3300026121 | Bacteria | 3488 |
| 110 | Ga0207698_10069141 | 3300026142 | Bacteria | 2791 |
| 111 | Ga0265336_10000008 | 3300028666 | Bacteria | 336082 |
| 112 | Ga0307517_10000160 | 3300028786 | Bacteria | 108370 |
| 113 | Ga0307515_10000204 | 3300028794 | Bacteria | 145075 |
| 114 | Ga0265324_10005686 | 3300029957 | Bacteria | 5325 |
| 115 | Ga0307512_10089017 | 3300030522 | Bacteria | 2162 |
| 116 | Ga0265328_10014588 | 3300031239 | Bacteria | 3093 |
| 117 | Ga0265331_10027426 | 3300031250 | Bacteria | 2855 |
| 118 | Ga0265327_10000149 | 3300031251 | Bacteria | 150385 |
| 119 | Ga0307513_10104194 | 3300031456 | Bacteria | 2851 |
| 120 | Ga0307509_10000317 | 3300031507 | Bacteria | 79032 |
| 121 | Ga0307509_10001515 | 3300031507 | Bacteria | 39177 |
| 122 | Ga0307508_10000332 | 3300031616 | Bacteria | 57039 |
| 123 | Ga0307508_10001814 | 3300031616 | Bacteria | 23664 |
| 124 | Ga0307508_10008491 | 3300031616 | Bacteria | 9489 |
| 125 | Ga0307508_10009940 | 3300031616 | Bacteria | 8722 |
| 126 | Ga0307508_10057038 | 3300031616 | Bacteria | 3456 |
| 127 | Ga0307514_10001819 | 3300031649 | Bacteria | 23809 |
| 128 | Ga0307516_10004060 | 3300031730 | Bacteria | 18325 |
| 129 | Ga0307405_10014783 | 3300031731 | Bacteria | 4208 |
| 130 | Ga0307405_10056164 | 3300031731 | Bacteria | 2468 |
| 131 | Ga0307415_100072530 | 3300032126 | Bacteria | 2425 |
| 132 | Ga0307507_10006058 | 3300033179 | Bacteria | 19007 |
| 133 | Ga0307510_10012190 | 3300033180 | Bacteria | 10193 |
| 134 | Ga0307510_10055252 | 3300033180 | Bacteria | 4149 |
| 135 | Ga0307510_10061252 | 3300033180 | Bacteria | 3860 |
| 136 | Ga0307510_10139816 | 3300033180 | Bacteria | 2068 |
| 137 | Ga0373934_0025495 | 3300035086 | Bacteria | 2290 |
| 138 | Ga0373961_0015125 | 3300035241 | Bacteria | 1969 |
| 139 | Ga0373931_0002358 | 3300035691 | Bacteria | 8348 |
| 140 | Ga0395898_0057504 | 3300037466 | Bacteria | 3790 |
| 141 | Ga0395905_0002076 | 3300037471 | Bacteria | 22813 |
| 142 | Ga0395905_0006990 | 3300037471 | Bacteria | 11280 |
| 143 | Ga0395905_0058649 | 3300037471 | Bacteria | 3599 |
| 144 | Ga0395905_0150105 | 3300037471 | Bacteria | 2192 |
| 145 | Ga0395901_0003478 | 3300038443 | Bacteria | 15864 |
| 146 | Ga0436361_0525485 | 3300039447 | Bacteria | 3377 |
| 147 | Ga0436361_0813098 | 3300039447 | Bacteria | 136133 |
| 148 | Ga0436361_1079266 | 3300039447 | Bacteria | 7219 |
| 149 | Ga0450917_000953 | 3300042120 | Bacteria | 2130 |
| 150 | Ga0450888_000003 | 3300042126 | Bacteria | 17362 |
| 151 | Ga0450892_001433 | 3300042130 | Bacteria | 2337 |
| 152 | Ga0451577_0001465 | 3300042876 | Bacteria | 31307 |
| 153 | Ga0451577_0002623 | 3300042876 | Bacteria | 21073 |
| 154 | Ga0451577_0118762 | 3300042876 | Bacteria | 2368 |
| 155 | Ga0451577_0195739 | 3300042876 | Bacteria | 1824 |
| 156 | Ga0466969_0003481 | 3300044656 | Bacteria | 8365 |
| 157 | Ga0466965_0002292 | 3300044683 | Bacteria | 8068 |
| 158 | Ga0466966_0009101 | 3300044684 | Bacteria | 6577 |
| 159 | Ga0466961_0019900 | 3300044693 | Bacteria | 4320 |
| 160 | Ga0466964_0001593 | 3300044706 | Bacteria | 7817 |
| 161 | Ga0453684_0001859 | 3300044712 | Bacteria | 55111 |
| 162 | Ga0453684_0033009 | 3300044712 | Bacteria | 7225 |
| 163 | Ga0453684_0056659 | 3300044712 | Bacteria | 5081 |
| 164 | Ga0466970_0010323 | 3300044765 | Bacteria | 4739 |
| 165 | Ga0451576_0030098 | 3300045051 | Bacteria | 5806 |
| 166 | Ga0451576_0198107 | 3300045051 | Bacteria | 2098 |
| 167 | Ga0495592_0000175 | 3300046454 | Bacteria | 56416 |
| 168 | Ga0495629_0039480 | 3300046459 | Bacteria | 3322 |
| 169 | Ga0495638_0093807 | 3300046460 | Bacteria | 1805 |
| 170 | Ga0495641_0000049 | 3300046461 | Bacteria | 73908 |
| 171 | Ga0495650_0005883 | 3300046471 | Bacteria | 7798 |
| 172 | Ga0495583_0000171 | 3300046506 | Bacteria | 110806 |
| 173 | Ga0495606_0010682 | 3300046507 | Bacteria | 7584 |
| 174 | Ga0495606_0066399 | 3300046507 | Bacteria | 2288 |
| 175 | Ga0495637_0008368 | 3300046520 | Bacteria | 5086 |
| 176 | Ga0495644_0001227 | 3300046523 | Bacteria | 10500 |
| 177 | Ga0495654_0003342 | 3300046530 | Bacteria | 9888 |
| 178 | Ga0495654_0009271 | 3300046530 | Bacteria | 5397 |
| 179 | Ga0495656_0002696 | 3300046615 | Bacteria | 5928 |
| 180 | Ga0495668_0045464 | 3300046616 | Bacteria | 2441 |
| 181 | Ga0495625_0002069 | 3300046660 | Bacteria | 22491 |
| 182 | Ga0495658_0035511 | 3300046683 | Bacteria | 2743 |
| 183 | Ga0495649_0002305 | 3300046694 | Bacteria | 13554 |
| 184 | Ga0495589_0004834 | 3300046794 | Bacteria | 7154 |
| 185 | Ga0495673_0009467 | 3300047469 | Bacteria | 5393 |
| 186 | Ga0495686_0000008 | 3300047472 | Bacteria | 727479 |
| 187 | Ga0495686_0004282 | 3300047472 | Bacteria | 11826 |
| 188 | Ga0495686_0015001 | 3300047472 | Bacteria | 5310 |
| 189 | Ga0495686_0020191 | 3300047472 | Bacteria | 4444 |
| 190 | Ga0495686_0026788 | 3300047472 | Bacteria | 3771 |
| 191 | Ga0495626_0033873 | 3300048091 | Bacteria | 2446 |
| 192 | Ga0496104_0121395 | 3300048907 | Bacteria | 2509 |
| 193 | Ga0496108_0157456 | 3300048911 | Bacteria | 1962 |
| 194 | Ga0496112_0010217 | 3300048915 | Bacteria | 8509 |
| 195 | Ga0496113_0059496 | 3300048916 | Bacteria | 2878 |
| 196 | Ga0496121_0029307 | 3300048924 | Bacteria | 5094 |
| 197 | Ga0501043_0000013 | 3300049579 | Bacteria | 185639 |
| 198 | Ga0501046_0000125 | 3300049580 | Bacteria | 81656 |
| 199 | Ga0501047_0000040 | 3300049581 | Bacteria | 185677 |
| 200 | Ga0501048_0002958 | 3300049582 | Bacteria | 12974 |
| 201 | Ga0501080_0124528 | 3300049742 | Bacteria | 2387 |
| 202 | Ga0501044_0057937 | 3300049823 | Bacteria | 3974 |
| 203 | Ga0501045_0015770 | 3300049824 | Bacteria | 5360 |
| 204 | nmdc:mga0k408_11069_c1 | 3300050493 | Bacteria | 4901 |
| 205 | nmdc:mga0k408_9349_c1 | 3300050493 | Bacteria | 5282 |
| 206 | nmdc:mga07m45_56163_c1 | 3300050496 | Bacteria | 2225 |
| 207 | nmdc:mga07m45_6777_c1 | 3300050496 | Bacteria | 5818 |
| 208 | nmdc:mga09592_8439_c1 | 3300050508 | Bacteria | 8376 |
| 209 | Ga0500635_0000003 | 3300053080 | Bacteria | 216927 |
| 210 | Ga0500594_0000303 | 3300053118 | Bacteria | 11081 |
| 211 | Ga0500559_0000065 | 3300053136 | Bacteria | 85032 |
| 212 | Ga0500588_0000198 | 3300053146 | Bacteria | 8377 |
| 213 | Ga0500622_0000656 | 3300053156 | Bacteria | 30810 |
| 214 | 2644246753 | 2643221644 | Bacteria | 6865017 |
| 215 | 2644338435 | 2643221660 | Bacteria | 4208257 |
| 216 | 2831870306 | 2831864461 | Bacteria | 6502356 |
| 217 | 3003008528 | 3002998708 | Bacteria | 11715108 |
| 218 | Ga0207671_10075437 | |||
| 219 | JGI25156J39149_1000213 | |||
| 220 | JGI25157J39369_1000131 | |||
| 221 | rootH1_10007996 | |||
| 222 | rootH2_10018917 | |||
| 223 | Ga0055539_1000174 | |||
| 224 | Ga0055539_1001109 | |||
| 225 | Ga0055533_1000011 | |||
| 226 | Ga0055525_1000056 | |||
| 227 | Ga0055525_1000844 | |||
| 228 | Ga0055535_1000302 | |||
| 229 | Ga0055529_1000306 | |||
| 230 | Ga0055531_10000031 | |||
| 231 | Ga0070658_10132261 | |||
| 232 | Ga0070690_100007347 | |||
| 233 | Ga0070690_100062681 | |||
| 234 | Ga0070670_100001719 | |||
| 235 | Ga0070670_100034791 | |||
| 236 | Ga0070677_10004643 | |||
| 237 | Ga0068869_100008855 | |||
| 238 | Ga0070689_100015284 | |||
| 239 | Ga0070675_100000052 | |||
| 240 | Ga0070671_100005337 | |||
| 241 | Ga0070671_100008516 | |||
| 242 | Ga0070671_100159064 | |||
| 243 | Ga0070673_100005208 | |||
| 244 | Ga0070673_100006032 | |||
| 245 | Ga0070667_100022012 | |||
| 246 | Ga0070678_100002503 | |||
| 247 | Ga0070678_100033300 | |||
| 248 | Ga0068867_100151554 | |||
| 249 | Ga0070706_100173609 | |||
| 250 | Ga0070684_100236142 | |||
| 251 | Ga0070672_100000608 | |||
| 252 | Ga0068855_100001326 | |||
| 253 | Ga0068857_100018727 | |||
| 254 | Ga0068854_100001534 | |||
| 255 | Ga0068859_100000624 | |||
| 256 | Ga0068864_100000276 | |||
| 257 | Ga0068864_100005072 | |||
| 258 | Ga0068863_100000744 | |||
| 259 | Ga0068858_100000312 | |||
| 260 | Ga0075366_10009120 | |||
| 261 | Ga0075366_10077130 | |||
| 262 | Ga0097621_100003258 | |||
| 263 | Ga0097621_100005140 | |||
| 264 | Ga0075370_10056727 | |||
| 265 | Ga0075370_10062760 | |||
| 266 | Ga0068871_100004081 | |||
| 267 | Ga0075429_100165977 | |||
| 268 | Ga0097620_100000624 | |||
| 269 | Ga0105248_10001893 | |||
| 270 | Ga0105248_10002353 | |||
| 271 | Ga0105237_10081038 | |||
| 272 | Ga0105238_10062221 | |||
| 273 | Ga0105239_10031878 | |||
| 274 | Ga0157378_10070992 | |||
| 275 | Ga0163162_10032191 | |||
| 276 | Ga0163163_10040333 | |||
| 277 | Ga0157379_10010980 | |||
| 278 | Ga0157379_10018451 | |||
| 279 | Ga0157376_10003073 | |||
| 280 | Ga0213872_10000155 | |||
| 281 | Ga0209674_100003 | |||
| 282 | Ga0209563_100010 | |||
| 283 | Ga0209563_100014 | |||
| 284 | Ga0207427_100256 | |||
| 285 | Ga0209258_100162 | |||
| 286 | Ga0209258_101009 | |||
| 287 | Ga0209646_1000066 | |||
| 288 | Ga0209026_1000027 | |||
| 289 | Ga0209677_100083 | |||
| 290 | Ga0209677_100154 | |||
| 291 | Ga0209759_1000240 | |||
| 292 | Ga0209759_1002846 | |||
| 293 | Ga0209455_1000128 | |||
| 294 | Ga0209051_1007623 | |||
| 295 | Ga0209051_1009850 | |||
| 296 | Ga0209257_1000016 | |||
| 297 | Ga0207682_10012927 | |||
| 298 | Ga0207680_10018321 | |||
| 299 | Ga0207705_10022695 | |||
| 300 | Ga0207695_10005755 | |||
| 301 | Ga0207657_10074884 | |||
| 302 | Ga0207650_10004519 | |||
| 303 | Ga0207650_10078268 | |||
| 304 | Ga0207659_10000208 | |||
| 305 | Ga0207644_10008196 | |||
| 306 | Ga0207644_10034835 | |||
| 307 | Ga0207706_10063907 | |||
| 308 | Ga0207669_10141776 | |||
| 309 | Ga0207691_10000679 | |||
| 310 | Ga0207691_10097744 | |||
| 311 | Ga0207711_10001652 | |||
| 312 | Ga0207711_10041889 | |||
| 313 | Ga0207689_10050679 | |||
| 314 | Ga0207667_10023934 | |||
| 315 | Ga0207651_10000366 | |||
| 316 | Ga0207640_10006110 | |||
| 317 | Ga0207677_10000645 | |||
| 318 | Ga0207703_10002268 | |||
| 319 | Ga0207641_10000752 | |||
| 320 | Ga0207641_10013605 | |||
| 321 | Ga0207648_10011242 | |||
| 322 | Ga0207676_10001107 | |||
| 323 | Ga0207676_10009135 | |||
| 324 | Ga0207674_10002178 | |||
| 325 | Ga0207683_10005508 | |||
| 326 | Ga0207683_10055085 | |||
| 327 | Ga0207698_10069141 | |||
| 328 | Ga0265336_10000008 | |||
| 329 | Ga0307517_10000160 | |||
| 330 | Ga0307515_10000204 | |||
| 331 | Ga0265324_10005686 | |||
| 332 | Ga0307512_10089017 | |||
| 333 | Ga0265328_10014588 | |||
| 334 | Ga0265331_10027426 | |||
| 335 | Ga0265327_10000149 | |||
| 336 | Ga0307513_10104194 | |||
| 337 | Ga0307509_10000317 | |||
| 338 | Ga0307509_10001515 | |||
| 339 | Ga0307508_10000332 | |||
| 340 | Ga0307508_10001814 | |||
| 341 | Ga0307508_10008491 | |||
| 342 | Ga0307508_10009940 | |||
| 343 | Ga0307508_10057038 | |||
| 344 | Ga0307514_10001819 | |||
| 345 | Ga0307516_10004060 | |||
| 346 | Ga0307405_10014783 | |||
| 347 | Ga0307405_10056164 | |||
| 348 | Ga0307415_100072530 | |||
| 349 | Ga0307507_10006058 | |||
| 350 | Ga0307510_10012190 | |||
| 351 | Ga0307510_10055252 | |||
| 352 | Ga0307510_10061252 | |||
| 353 | Ga0307510_10139816 | |||
| 354 | Ga0373934_0025495 | |||
| 355 | Ga0373961_0015125 | |||
| 356 | Ga0373931_0002358 | |||
| 357 | Ga0395898_0057504 | |||
| 358 | Ga0395905_0002076 | |||
| 359 | Ga0395905_0006990 | |||
| 360 | Ga0395905_0058649 | |||
| 361 | Ga0395905_0150105 | |||
| 362 | Ga0395901_0003478 | |||
| 363 | Ga0436361_0525485 | |||
| 364 | Ga0436361_0813098 | |||
| 365 | Ga0436361_1079266 | |||
| 366 | Ga0450917_000953 | |||
| 367 | Ga0450888_000003 | |||
| 368 | Ga0450892_001433 | |||
| 369 | Ga0451577_0001465 | |||
| 370 | Ga0451577_0002623 | |||
| 371 | Ga0451577_0118762 | |||
| 372 | Ga0451577_0195739 | |||
| 373 | Ga0466969_0003481 | |||
| 374 | Ga0466965_0002292 | |||
| 375 | Ga0466966_0009101 | |||
| 376 | Ga0466961_0019900 | |||
| 377 | Ga0466964_0001593 | |||
| 378 | Ga0453684_0001859 | |||
| 379 | Ga0453684_0033009 | |||
| 380 | Ga0453684_0056659 | |||
| 381 | Ga0466970_0010323 | |||
| 382 | Ga0451576_0030098 | |||
| 383 | Ga0451576_0198107 | |||
| 384 | Ga0495592_0000175 | |||
| 385 | Ga0495629_0039480 | |||
| 386 | Ga0495638_0093807 | |||
| 387 | Ga0495641_0000049 | |||
| 388 | Ga0495650_0005883 | |||
| 389 | Ga0495583_0000171 | |||
| 390 | Ga0495606_0010682 | |||
| 391 | Ga0495606_0066399 | |||
| 392 | Ga0495637_0008368 | |||
| 393 | Ga0495644_0001227 | |||
| 394 | Ga0495654_0003342 | |||
| 395 | Ga0495654_0009271 | |||
| 396 | Ga0495656_0002696 | |||
| 397 | Ga0495668_0045464 | |||
| 398 | Ga0495625_0002069 | |||
| 399 | Ga0495658_0035511 | |||
| 400 | Ga0495649_0002305 | |||
| 401 | Ga0495589_0004834 | |||
| 402 | Ga0495673_0009467 | |||
| 403 | Ga0495686_0000008 | |||
| 404 | Ga0495686_0004282 | |||
| 405 | Ga0495686_0015001 | |||
| 406 | Ga0495686_0020191 | |||
| 407 | Ga0495686_0026788 | |||
| 408 | Ga0495626_0033873 | |||
| 409 | Ga0496104_0121395 | |||
| 410 | Ga0496108_0157456 | |||
| 411 | Ga0496112_0010217 | |||
| 412 | Ga0496113_0059496 | |||
| 413 | Ga0496121_0029307 | |||
| 414 | Ga0501043_0000013 | |||
| 415 | Ga0501046_0000125 | |||
| 416 | Ga0501047_0000040 | |||
| 417 | Ga0501048_0002958 | |||
| 418 | Ga0501080_0124528 | |||
| 419 | Ga0501044_0057937 | |||
| 420 | Ga0501045_0015770 | |||
| 421 | nmdc:mga0k408_11069_c1 | |||
| 422 | nmdc:mga0k408_9349_c1 | |||
| 423 | nmdc:mga07m45_56163_c1 | |||
| 424 | nmdc:mga07m45_6777_c1 | |||
| 425 | nmdc:mga09592_8439_c1 | |||
| 426 | Ga0500635_0000003 | |||
| 427 | Ga0500594_0000303 | |||
| 428 | Ga0500559_0000065 | |||
| 429 | Ga0500588_0000198 | |||
| 430 | Ga0500622_0000656 | |||
| 431 | 2644246753 | |||
| 432 | 2644338435 | |||
| 433 | 2831870306 | |||
| 434 | 3003008528 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2i0z-assembly1.cif.gz_A | crystal structure of a fad binding protein from bacillus cereus, a putative nad(fad)-utilizing dehydrogenases | 0.9887 | 12 | 42 |
| 4bk1-assembly1.cif.gz_A-2 | crystal structure of 3-hydroxybenzoate 6-hydroxylase uncovers lipid- assisted flavoprotein strategy for regioselective aromatic hydroxylation: h213s mutant in complex with 3-hydroxybenzoate | 0.9673 | 10 | 38 |
| 4j33-assembly2.cif.gz_B | crystal structure of kynurenine 3-monooxygenase (kmo-394) | 0.9666 | 10 | 42 |
| 4j34-assembly1.cif.gz_A | crystal structure of kynurenine 3-monooxygenase - truncated at position 394 plus his tag cleaved. | 0.9657 | 10 | 42 |
| 4rep-assembly1.cif.gz_A | crystal structure of gamma-carotenoid desaturase | 0.9657 | 10 | 42 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q5VQP1_29_415_3.50.50.60 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 1.003 | 12 | 38 | 3.50.50.60 |
| af_P9WNY9_4_366_3.50.50.60 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.9915 | 12 | 39 | 3.50.50.60 |
| af_A4HWA7_1_176_3.50.50.60 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.9882 | 10 | 39 | 3.50.50.60 |
| 3mogC01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain | 0.9852 | 10 | 194 | 3.40.50.720 |
| af_F6P928_26_379_3.50.50.60 | Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain | 0.9815 | 12 | 38 | 3.50.50.60 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-Q9F7E8-F1-model_v4 | 3-hydroxybutyryl CoA dehydrogenase | 0.9961 | 10 | 181 |
GO:0006635
GO:0008691 GO:0070403 |
| AF-A0A0L8QFE2-F1-model_v4 | deleted | 0.9886 | 76 | 159 |
|
| AF-A0A376YA70-F1-model_v4 | 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.157) | 0.988 | 63 | 246 |
GO:0006635
GO:0008691 GO:0070403 |
| AF-A0A354FM01-F1-model_v4 | 3-hydroxyacyl-CoA dehydrogenase | 0.988 | 10 | 122 |
GO:0006631
GO:0016491 GO:0070403 |
| AF-A0A519MEE2-F1-model_v4 | 3-hydroxyacyl-CoA dehydrogenase | 0.9863 | 10 | 152 |
GO:0006635
GO:0008691 GO:0070403 |