F325392

General Info

Members Datasets Scaffolds Average Seq Length
214 150 428 221

Family's Representative Sequence

Representative Sequence 3300032126|Ga0307415_100221823|Ga0307415_1002218232
Length 255
Sequence MPAQTDPASRTPLSRQRVLGAAVALADRGGIGSLSMRKLAQELGVEAMSLYHHVANKDAILDGIVDVVFGEIELPSGEADWKAAMRRRAISAREALRRHPWATALMESRSTPGPANLRHHDAVLGILRNAGFSVELAAHAYSLLDAYIYGFALQETSLPFGTPEETAEVAQTIMAEFPAHEYPHLTEIATEHVLQPGYDYGNEFRFGLDLILDGLDQARTAPSRGNRAAPSYLGGSEPAWIRPRSTQRRRSSSSA

Samples

Sample ID Description Type Environment
1 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
7 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
8 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
11 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
12 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
13 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
14 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
15 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
25 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
26 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
31 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
32 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
39 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
40 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
41 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
42 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
53 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
55 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
56 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
57 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
63 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
64 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
65 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
66 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
74 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
75 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
76 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
77 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
78 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
79 3300042118 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_082316_2156 Metagenome Rhizosphere
80 3300042120 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913L_E14_082316_2192 Metagenome Rhizosphere
81 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
86 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
87 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
88 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
89 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
90 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
91 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
92 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
93 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
94 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
95 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
96 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
97 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
98 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
99 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
100 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
101 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
102 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
103 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
105 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
106 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
109 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
117 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
118 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
119 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
120 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
121 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
122 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
123 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
124 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
125 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
126 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
127 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
128 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049767 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_B_4_drought Metagenome Rhizosphere
131 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
134 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
135 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
136 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
137 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
138 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
139 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
140 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
141 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
142 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
143 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
144 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
145 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
148 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
149 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
150 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.53
Metatranscriptomes 0.47
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.93
Nodule 0
Rhizoplane 6.07
Rhizosphere 92.52
Stem 0
Stem Tuber 0
Unclassified 0.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307415_100221823 3300032126 Bacteria 1516
2 JGI24735J21928_10031918 3300002067 Bacteria 1560
3 JGI25406J46586_10010201 3300003203 Bacteria 4176
4 JGI25407J50210_10010624 3300003373 Bacteria 2344
5 JGI25407J50210_10036241 3300003373 Bacteria 1269
6 JGI25407J50210_10039103 3300003373 Bacteria 1217
7 JGI25407J50210_10040996 3300003373 Bacteria 1186
8 Ga0070658_10057369 3300005327 Bacteria 3167
9 Ga0070709_10058158 3300005434 Bacteria 2451
10 Ga0070714_100050336 3300005435 Bacteria 3548
11 Ga0070701_10064596 3300005438 Bacteria 1940
12 Ga0070663_100188295 3300005455 Bacteria 1605
13 Ga0070699_100184685 3300005518 Bacteria 1851
14 Ga0070699_100331680 3300005518 Bacteria 1368
15 Ga0070684_100522423 3300005535 Bacteria 1100
16 Ga0068853_100022135 3300005539 Bacteria 5305
17 Ga0068852_100731024 3300005616 Bacteria 1001
18 Ga0068861_100481606 3300005719 Bacteria 1118
19 Ga0068860_100002045 3300005843 Bacteria 21256
20 Ga0081455_10047991 3300005937 Bacteria 3693
21 Ga0081538_10000209 3300005981 Bacteria 65166
22 Ga0081538_10001379 3300005981 Bacteria 24922
23 Ga0081538_10001418 3300005981 Bacteria 24637
24 Ga0081538_10002832 3300005981 Bacteria 16594
25 Ga0081538_10004897 3300005981 Bacteria 12196
26 Ga0081538_10006008 3300005981 Bacteria 10801
27 Ga0081538_10016883 3300005981 Bacteria 5570
28 Ga0081538_10040010 3300005981 Bacteria 2997
29 Ga0081539_10001805 3300005985 Bacteria 33857
30 Ga0081539_10005524 3300005985 Bacteria 12824
31 Ga0081539_10008636 3300005985 Bacteria 8786
32 Ga0081539_10048546 3300005985 Bacteria 2414
33 Ga0081539_10088585 3300005985 Bacteria 1605
34 Ga0070717_10349344 3300006028 Bacteria 1322
35 Ga0075432_10035347 3300006058 Bacteria 1736
36 Ga0075428_100596922 3300006844 Bacteria 1179
37 Ga0075430_100109030 3300006846 Bacteria 2309
38 Ga0075431_100078456 3300006847 Bacteria 3409
39 Ga0075434_100229668 3300006871 Bacteria 1875
40 Ga0075436_100562245 3300006914 Bacteria 838
41 Ga0075435_100117008 3300007076 Bacteria 2221
42 Ga0105240_10329432 3300009093 Bacteria 1738
43 Ga0111539_10008068 3300009094 Bacteria 13419
44 Ga0111539_10297894 3300009094 Bacteria 1877
45 Ga0114129_10001604 3300009147 Bacteria 30740
46 Ga0114129_10063615 3300009147 Bacteria 5151
47 Ga0105243_10636112 3300009148 Bacteria 1032
48 Ga0105241_10095939 3300009174 Bacteria 2348
49 Ga0105239_10186016 3300010375 Bacteria 2324
50 Ga0157371_10602880 3300013102 Bacteria 817
51 Ga0157369_10063143 3300013105 Bacteria 3991
52 Ga0163162_10018281 3300013306 Bacteria 6866
53 Ga0163162_10454752 3300013306 Bacteria 1412
54 Ga0157375_10334984 3300013308 Bacteria 1678
55 Ga0182008_10015771 3300014497 Bacteria 3936
56 Ga0157377_10431935 3300014745 Bacteria 905
57 Ga0157379_10005646 3300014968 Bacteria 10749
58 Ga0163161_10020680 3300017792 Bacteria 4622
59 Ga0224712_10038225 3300022467 Bacteria 1791
60 Ga0207699_10079025 3300025906 Bacteria 2034
61 Ga0207649_10025053 3300025920 Bacteria 3474
62 Ga0207687_10196877 3300025927 Bacteria 1572
63 Ga0207700_10068632 3300025928 Bacteria 2718
64 Ga0207664_10011663 3300025929 Bacteria 6260
65 Ga0207706_10019325 3300025933 Bacteria 6128
66 Ga0207668_10151891 3300025972 Bacteria 1794
67 Ga0207677_10483358 3300026023 Bacteria 1067
68 Ga0207708_10327868 3300026075 Bacteria 1251
69 Ga0207675_100002433 3300026118 Bacteria 18445
70 Ga0207428_10006711 3300027907 Bacteria 10568
71 Ga0268264_10416645 3300028381 Bacteria 1294
72 Ga0265319_1074846 3300028563 Bacteria 1081
73 Ga0265334_10049267 3300028573 Bacteria 1621
74 Ga0265320_10147314 3300031240 Bacteria 1064
75 Ga0265339_10000437 3300031249 Bacteria 32747
76 Ga0265316_10006204 3300031344 Bacteria 11458
77 Ga0307513_10035245 3300031456 Bacteria 5603
78 Ga0265314_10000023 3300031711 Bacteria 295290
79 Ga0307405_10015109 3300031731 Bacteria 4171
80 Ga0307405_10019306 3300031731 Bacteria 3783
81 Ga0307405_10101014 3300031731 Bacteria 1934
82 Ga0307413_10067083 3300031824 Bacteria 2242
83 Ga0307410_10019448 3300031852 Bacteria 4131
84 Ga0307410_10187779 3300031852 Bacteria 1569
85 Ga0307406_10081460 3300031901 Bacteria 2152
86 Ga0307407_10032721 3300031903 Bacteria 2830
87 Ga0307412_10099902 3300031911 Bacteria 2050
88 Ga0307409_100002793 3300031995 Bacteria 9225
89 Ga0307409_100005296 3300031995 Bacteria 7401
90 Ga0307409_100017029 3300031995 Bacteria 4831
91 Ga0307409_100105921 3300031995 Bacteria 2345
92 Ga0307416_100000401 3300032002 Bacteria 22209
93 Ga0307416_100020446 3300032002 Bacteria 4724
94 Ga0307416_100045247 3300032002 Bacteria 3464
95 Ga0307414_10011295 3300032004 Bacteria 5232
96 Ga0307414_10028109 3300032004 Bacteria 3644
97 Ga0307415_100000123 3300032126 Bacteria 33429
98 Ga0307415_100171856 3300032126 Bacteria 1691
99 Ga0307415_100181069 3300032126 Bacteria 1653
100 Ga0307415_100181231 3300032126 Bacteria 1653
101 Ga0373937_0649257 3300036401 Bacteria 1001
102 Ga0395900_0181120 3300037418 Bacteria 2141
103 Ga0395905_0061605 3300037471 Bacteria 3510
104 Ga0395905_0583610 3300037471 Bacteria 1019
105 Ga0395901_0026583 3300038443 Bacteria 5943
106 Ga0439450_079866 3300042008 Bacteria 812
107 Ga0439454_000433 3300042011 Bacteria 3315
108 Ga0439455_0037168 3300042012 Bacteria 1234
109 Ga0439456_015287 3300042013 Bacteria 1602
110 Ga0439463_119511 3300042016 Unclassified 681
111 Ga0450914_024295 3300042118 Bacteria 695
112 Ga0450917_006074 3300042120 Bacteria 906
113 Ga0439435_0093366 3300042436 Bacteria 916
114 Ga0451577_0008796 3300042876 Bacteria 9783
115 Ga0439440_0048831 3300042993 Bacteria 1052
116 Ga0453684_0126483 3300044712 Bacteria 3075
117 Ga0466970_0055182 3300044765 Bacteria 2122
118 Ga0451576_0525225 3300045051 Unclassified 1244
119 Ga0495582_0111042 3300046473 Bacteria 1540
120 Ga0495616_0230546 3300046513 Bacteria 803
121 Ga0495640_0452869 3300046533 Bacteria 784
122 Ga0495609_0111668 3300046538 Bacteria 1180
123 Ga0495669_0162371 3300046684 Bacteria 1061
124 Ga0496100_0044345 3300048903 Bacteria 2848
125 Ga0496101_0014130 3300048904 Bacteria 5361
126 Ga0496102_0011373 3300048905 Bacteria 7670
127 Ga0496105_0397341 3300048908 Bacteria 1095
128 Ga0496108_0099975 3300048911 Bacteria 2473
129 Ga0496109_0057878 3300048912 Bacteria 3540
130 Ga0496109_0344883 3300048912 Bacteria 1406
131 Ga0496110_0172162 3300048913 Bacteria 1964
132 Ga0496111_0048401 3300048914 Bacteria 3062
133 Ga0496113_0260836 3300048916 Bacteria 1384
134 Ga0496114_0117931 3300048917 Bacteria 2280
135 Ga0496114_0345386 3300048917 Bacteria 1316
136 Ga0496115_0520293 3300048918 Bacteria 954
137 Ga0501031_0016009 3300049568 Bacteria 4869
138 Ga0501032_0045744 3300049569 Bacteria 2959
139 Ga0501032_0057551 3300049569 Bacteria 2612
140 Ga0501033_0109178 3300049570 Bacteria 2015
141 Ga0501036_0000618 3300049572 Bacteria 25859
142 Ga0501036_0006067 3300049572 Bacteria 9804
143 Ga0501037_0009854 3300049573 Bacteria 7012
144 Ga0501037_0022580 3300049573 Bacteria 4653
145 Ga0501038_0002202 3300049574 Bacteria 18119
146 Ga0501038_0035900 3300049574 Bacteria 4351
147 Ga0501039_0001370 3300049575 Bacteria 17893
148 Ga0501039_0123760 3300049575 Bacteria 2027
149 Ga0501040_0000259 3300049576 Bacteria 30940
150 Ga0501040_0000323 3300049576 Bacteria 28017
151 Ga0501041_0001808 3300049577 Bacteria 11987
152 Ga0501041_0012655 3300049577 Bacteria 4998
153 Ga0501042_0000355 3300049578 Bacteria 23062
154 Ga0501043_0014581 3300049579 Bacteria 6153
155 Ga0501046_0000713 3300049580 Bacteria 32092
156 Ga0501046_0003906 3300049580 Bacteria 13636
157 Ga0501048_0000723 3300049582 Bacteria 24183
158 Ga0501048_0033576 3300049582 Bacteria 3706
159 Ga0501067_0115572 3300049583 Bacteria 1492
160 Ga0501068_0022176 3300049584 Bacteria 3711
161 Ga0501068_0048304 3300049584 Bacteria 2569
162 Ga0501068_0228823 3300049584 Bacteria 1182
163 Ga0501069_0040605 3300049585 Bacteria 2572
164 Ga0501069_0292374 3300049585 Bacteria 954
165 Ga0501070_0364901 3300049586 Bacteria 1171
166 Ga0501071_0001987 3300049587 Bacteria 12219
167 Ga0501071_0002146 3300049587 Bacteria 11852
168 Ga0501072_0000175 3300049588 Bacteria 46097
169 Ga0501072_0078126 3300049588 Bacteria 2620
170 Ga0501072_0347707 3300049588 Bacteria 1177
171 Ga0501072_0719130 3300049588 Bacteria 784
172 Ga0501074_0000436 3300049590 Bacteria 24879
173 Ga0501074_0019646 3300049590 Bacteria 4903
174 Ga0501075_0002915 3300049591 Bacteria 11480
175 Ga0501076_0001072 3300049592 Bacteria 17974
176 Ga0501076_0002978 3300049592 Bacteria 11752
177 Ga0501077_0001910 3300049593 Bacteria 12616
178 Ga0501077_0052467 3300049593 Bacteria 2590
179 Ga0501079_0000169 3300049741 Bacteria 36466
180 Ga0501079_0000445 3300049741 Bacteria 26918
181 Ga0501080_0010160 3300049742 Bacteria 8608
182 Ga0501080_0031225 3300049742 Bacteria 4964
183 Ga0501081_0000098 3300049743 Bacteria 36248
184 Ga0501081_0025407 3300049743 Bacteria 3983
185 Ga0501083_0035457 3300049744 Bacteria 3408
186 Ga0501270_064428 3300049767 Bacteria 695
187 Ga0501035_0021215 3300049822 Bacteria 5971
188 Ga0501035_0032378 3300049822 Bacteria 4757
189 Ga0501044_0111596 3300049823 Bacteria 2742
190 Ga0501045_0000059 3300049824 Bacteria 50390
191 Ga0501045_0001353 3300049824 Bacteria 16279
192 nmdc:mga0yw44_10302_c1 3300050492 Bacteria 4768
193 nmdc:mga05p37_21168_c1 3300050507 Bacteria 7872
194 nmdc:mga05p37_2135_c1 3300050507 Bacteria 23086
195 nmdc:mga05p37_330257_c1 3300050507 Bacteria 1802
196 nmdc:mga09592_348102_c1 3300050508 Bacteria 1283
197 nmdc:mga0qj67_30710_c1 3300050509 Bacteria 4184
198 nmdc:mga06r32_986625_c1 3300050510 Bacteria 796
199 nmdc:mga08y16_129343_c1 3300050511 Bacteria 2627
200 nmdc:mga0n895_1043179_c1 3300050512 Bacteria 797
201 nmdc:mga0n895_301988_c1 3300050512 Bacteria 1623
202 nmdc:mga0rr50_52821_c1 3300050513 Bacteria 3021
203 nmdc:mga08x19_475306_c1 3300050514 Bacteria 881
204 nmdc:mga0a205_4033_c1 3300050515 Bacteria 13134
205 Ga0500635_0001172 3300053080 Bacteria 6279
206 Ga0495655_0002656 3300053083 Bacteria 2868
207 Ga0501084_0000693 3300054114 Bacteria 25796
208 Ga0501084_0004868 3300054114 Bacteria 10965
209 Ga0590075_003267 3300059424 Bacteria 3864
210 Ga0590077_036830 3300059426 Bacteria 1080
211 Ga0501082_0004152 3300060353 Bacteria 12656
212 Ga0501082_0135848 3300060353 Bacteria 2133
213 Ga0530510_0000717 3300061734 Bacteria 21524
214 Ga0530510_0000968 3300061734 Bacteria 18957
215 Ga0307415_100221823
216 JGI24735J21928_10031918
217 JGI25406J46586_10010201
218 JGI25407J50210_10010624
219 JGI25407J50210_10036241
220 JGI25407J50210_10039103
221 JGI25407J50210_10040996
222 Ga0070658_10057369
223 Ga0070709_10058158
224 Ga0070714_100050336
225 Ga0070701_10064596
226 Ga0070663_100188295
227 Ga0070699_100184685
228 Ga0070699_100331680
229 Ga0070684_100522423
230 Ga0068853_100022135
231 Ga0068852_100731024
232 Ga0068861_100481606
233 Ga0068860_100002045
234 Ga0081455_10047991
235 Ga0081538_10000209
236 Ga0081538_10001379
237 Ga0081538_10001418
238 Ga0081538_10002832
239 Ga0081538_10004897
240 Ga0081538_10006008
241 Ga0081538_10016883
242 Ga0081538_10040010
243 Ga0081539_10001805
244 Ga0081539_10005524
245 Ga0081539_10008636
246 Ga0081539_10048546
247 Ga0081539_10088585
248 Ga0070717_10349344
249 Ga0075432_10035347
250 Ga0075428_100596922
251 Ga0075430_100109030
252 Ga0075431_100078456
253 Ga0075434_100229668
254 Ga0075436_100562245
255 Ga0075435_100117008
256 Ga0105240_10329432
257 Ga0111539_10008068
258 Ga0111539_10297894
259 Ga0114129_10001604
260 Ga0114129_10063615
261 Ga0105243_10636112
262 Ga0105241_10095939
263 Ga0105239_10186016
264 Ga0157371_10602880
265 Ga0157369_10063143
266 Ga0163162_10018281
267 Ga0163162_10454752
268 Ga0157375_10334984
269 Ga0182008_10015771
270 Ga0157377_10431935
271 Ga0157379_10005646
272 Ga0163161_10020680
273 Ga0224712_10038225
274 Ga0207699_10079025
275 Ga0207649_10025053
276 Ga0207687_10196877
277 Ga0207700_10068632
278 Ga0207664_10011663
279 Ga0207706_10019325
280 Ga0207668_10151891
281 Ga0207677_10483358
282 Ga0207708_10327868
283 Ga0207675_100002433
284 Ga0207428_10006711
285 Ga0268264_10416645
286 Ga0265319_1074846
287 Ga0265334_10049267
288 Ga0265320_10147314
289 Ga0265339_10000437
290 Ga0265316_10006204
291 Ga0307513_10035245
292 Ga0265314_10000023
293 Ga0307405_10015109
294 Ga0307405_10019306
295 Ga0307405_10101014
296 Ga0307413_10067083
297 Ga0307410_10019448
298 Ga0307410_10187779
299 Ga0307406_10081460
300 Ga0307407_10032721
301 Ga0307412_10099902
302 Ga0307409_100002793
303 Ga0307409_100005296
304 Ga0307409_100017029
305 Ga0307409_100105921
306 Ga0307416_100000401
307 Ga0307416_100020446
308 Ga0307416_100045247
309 Ga0307414_10011295
310 Ga0307414_10028109
311 Ga0307415_100000123
312 Ga0307415_100171856
313 Ga0307415_100181069
314 Ga0307415_100181231
315 Ga0373937_0649257
316 Ga0395900_0181120
317 Ga0395905_0061605
318 Ga0395905_0583610
319 Ga0395901_0026583
320 Ga0439450_079866
321 Ga0439454_000433
322 Ga0439455_0037168
323 Ga0439456_015287
324 Ga0439463_119511
325 Ga0450914_024295
326 Ga0450917_006074
327 Ga0439435_0093366
328 Ga0451577_0008796
329 Ga0439440_0048831
330 Ga0453684_0126483
331 Ga0466970_0055182
332 Ga0451576_0525225
333 Ga0495582_0111042
334 Ga0495616_0230546
335 Ga0495640_0452869
336 Ga0495609_0111668
337 Ga0495669_0162371
338 Ga0496100_0044345
339 Ga0496101_0014130
340 Ga0496102_0011373
341 Ga0496105_0397341
342 Ga0496108_0099975
343 Ga0496109_0057878
344 Ga0496109_0344883
345 Ga0496110_0172162
346 Ga0496111_0048401
347 Ga0496113_0260836
348 Ga0496114_0117931
349 Ga0496114_0345386
350 Ga0496115_0520293
351 Ga0501031_0016009
352 Ga0501032_0045744
353 Ga0501032_0057551
354 Ga0501033_0109178
355 Ga0501036_0000618
356 Ga0501036_0006067
357 Ga0501037_0009854
358 Ga0501037_0022580
359 Ga0501038_0002202
360 Ga0501038_0035900
361 Ga0501039_0001370
362 Ga0501039_0123760
363 Ga0501040_0000259
364 Ga0501040_0000323
365 Ga0501041_0001808
366 Ga0501041_0012655
367 Ga0501042_0000355
368 Ga0501043_0014581
369 Ga0501046_0000713
370 Ga0501046_0003906
371 Ga0501048_0000723
372 Ga0501048_0033576
373 Ga0501067_0115572
374 Ga0501068_0022176
375 Ga0501068_0048304
376 Ga0501068_0228823
377 Ga0501069_0040605
378 Ga0501069_0292374
379 Ga0501070_0364901
380 Ga0501071_0001987
381 Ga0501071_0002146
382 Ga0501072_0000175
383 Ga0501072_0078126
384 Ga0501072_0347707
385 Ga0501072_0719130
386 Ga0501074_0000436
387 Ga0501074_0019646
388 Ga0501075_0002915
389 Ga0501076_0001072
390 Ga0501076_0002978
391 Ga0501077_0001910
392 Ga0501077_0052467
393 Ga0501079_0000169
394 Ga0501079_0000445
395 Ga0501080_0010160
396 Ga0501080_0031225
397 Ga0501081_0000098
398 Ga0501081_0025407
399 Ga0501083_0035457
400 Ga0501270_064428
401 Ga0501035_0021215
402 Ga0501035_0032378
403 Ga0501044_0111596
404 Ga0501045_0000059
405 Ga0501045_0001353
406 nmdc:mga0yw44_10302_c1
407 nmdc:mga05p37_21168_c1
408 nmdc:mga05p37_2135_c1
409 nmdc:mga05p37_330257_c1
410 nmdc:mga09592_348102_c1
411 nmdc:mga0qj67_30710_c1
412 nmdc:mga06r32_986625_c1
413 nmdc:mga08y16_129343_c1
414 nmdc:mga0n895_1043179_c1
415 nmdc:mga0n895_301988_c1
416 nmdc:mga0rr50_52821_c1
417 nmdc:mga08x19_475306_c1
418 nmdc:mga0a205_4033_c1
419 Ga0500635_0001172
420 Ga0495655_0002656
421 Ga0501084_0000693
422 Ga0501084_0004868
423 Ga0590075_003267
424 Ga0590077_036830
425 Ga0501082_0004152
426 Ga0501082_0135848
427 Ga0530510_0000717
428 Ga0530510_0000968

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

18

64

0.95

PF02909

TetR_C_1

Tetracyclin repressor-like, C-terminal domain

74

219

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6rxb-assembly2.cif.gz_D crystal structure of tetr-q116a from acinetobacter baumannii aye in complex with minocycline 0.8584 12 216
6yr2-assembly1.cif.gz_BBB tetr(d) soaked with tigecycline p4(1)2(1)2 0.8318 11 222
2xge-assembly1.cif.gz_A-2 crystal structure of a designed heterodimeric variant t-a(a)b of the tetracycline repressor 0.83 11 222
2xge-assembly2.cif.gz_B-2 crystal structure of a designed heterodimeric variant t-a(a)b of the tetracycline repressor 0.8299 11 222
2y2z-assembly1.cif.gz_A ligand-free form of tetr-like repressor simr 0.8298 12 220
ID Description Score Start End Superfamily
1qpiA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9742 12 69 1.10.10.60
2y2zA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9692 12 66 1.10.10.60
2y31B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9689 12 66 1.10.10.60
2y30B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9669 14 65 1.10.10.60
2y30A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.962 14 66 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A7Y9ICM4-F1-model_v4 AcrR family transcriptional regulator 0.9756 18 214 GO:0000976
GO:0003700
GO:0045892
GO:0046677
GO:0046872
AF-A0A7Y0M1Y3-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9719 2 224 GO:0000976
GO:0003700
GO:0045892
GO:0046677
GO:0046872
AF-A0A3C2BZJ8-F1-model_v4 TetR family transcriptional regulator 0.966 63 219 GO:0045892
AF-A0A7T8ZEG8-F1-model_v4 deleted 0.9638 1 216
AF-A0A2S1ZA50-F1-model_v4 deleted 0.9621 23 214

Map