F322724
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 212 | 151 | 191 | 258 |
Family's Representative Sequence
| Representative Sequence | 3300006946|Ga0079104_1000098|Ga0079104_1000098111 |
| Length | 282 |
| Sequence | MAQTAAPRPLPVPPIAAEWTLPAGWRTLEFISDLHLQASEPATVQAFRQYLAATRADAVFLLGDLFEVWVGDDALLEPGSFEAECATAMRAAATRTPLFFMQGNRDFLTGAQFDALCGTTTLTDPTVLDCGDQRILLSHGDALCLDDVDYQRFRAMARSAAWQAGFLAQPLQVRRDQARGIRQESESRKRESDGHGAAMPTYADLDAQATRSWLHAAGAATLIHGHTHRPADHDLGDGLRRIVLSDWDLAAPAPRAEVLRWERGMGLQRLPLSDVLEQASPP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2547132374 | Acidovorax radicis N35 | Isolate | Unclassified |
| 2 | 2643221570 | Acidovorax sp. Root568 | Isolate | Unclassified |
| 3 | 2643221596 | Acidovorax sp. Root70 | Isolate | Unclassified |
| 4 | 2643221609 | Acidovorax sp. Root217 | Isolate | Unclassified |
| 5 | 2643221611 | Acidovorax sp. Root219 | Isolate | Unclassified |
| 6 | 2643221652 | Acidovorax sp. Root402 | Isolate | Unclassified |
| 7 | 2643221717 | Acidovorax sp. Root267 | Isolate | Unclassified |
| 8 | 2721755523 | Delftia sp. HK171 | Isolate | Unclassified |
| 9 | 2738543012 | Acidovorax sp. CF301 | Isolate | Unclassified |
| 10 | 2738543013 | Variovorax sp. BT01 | Isolate | Unclassified |
| 11 | 2816332133 | Acidovorax radicis 2721A | Isolate | Unclassified |
| 12 | 2839138175 | Delftia acidovorans B15 | Isolate | Rhizosphere |
| 13 | 2842733646 | Variovorax sp. R-72446 | Isolate | Unclassified |
| 14 | 2842747753 | Variovorax sp. R-72060 | Isolate | Unclassified |
| 15 | 2885192300 | Variovorax sp. MHTC-1 | Isolate | Rhizosphere |
| 16 | 2904479285 | Comamonas sediminis 4487 | Isolate | Rhizosphere |
| 17 | 2919704043 | Hydrogenophaga palleronii 4249 | Isolate | Unclassified |
| 18 | 2928115317 | Pseudacidovorax sp. 1753 | Isolate | Rhizosphere |
| 19 | 2939631187 | Ottowia thiooxydans 2709 | Isolate | Rhizosphere |
| 20 | 2954767861 | Variovorax sp. TBS-050B | Isolate | Rhizosphere |
| 21 | 2990710928 | Acidovorax delafieldii SLBN-75 | Isolate | Rhizosphere |
| 22 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 23 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 24 | 3300003322 | Sugarcane root Sample L2 | Metagenome | Unclassified |
| 25 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 26 | 3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 29 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 30 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 31 | 3300006038 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 | Metagenome | Endosphere |
| 32 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 33 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 34 | 3300006058 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 | Metagenome | Rhizosphere |
| 35 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 36 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 37 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 38 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 39 | 3300006353 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 | Metagenome | Endosphere |
| 40 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 41 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 42 | 3300006946 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG | Metagenome | Nodule |
| 43 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 44 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 46 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 49 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 50 | 3300015683 | Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 | Metagenome | Rhizosphere |
| 51 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300027111 | Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) | Metagenome | Nodule |
| 58 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300027907 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) | Metagenome | Rhizosphere |
| 60 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 61 | 3300030744 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 | Metagenome | Rhizosphere |
| 62 | 3300030745 | Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 | Metagenome | Rhizosphere |
| 63 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 64 | 3300031238 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG | Metagenome | Rhizosphere |
| 65 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 66 | 3300031247 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG | Metagenome | Rhizosphere |
| 67 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 68 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 69 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 70 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 71 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 72 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 73 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 74 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 75 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 76 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 77 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 78 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 79 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 80 | 3300041405 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 | Metagenome | Rhizosphere |
| 81 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 82 | 3300041410 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 | Metagenome | Rhizosphere |
| 83 | 3300041411 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 | Metagenome | Rhizosphere |
| 84 | 3300041413 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 | Metagenome | Rhizosphere |
| 85 | 3300041512 | White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG | Metagenome | Unclassified |
| 86 | 3300041997 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 | Metagenome | Rhizosphere |
| 87 | 3300042002 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 | Metagenome | Rhizosphere |
| 88 | 3300042004 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 | Metagenome | Rhizosphere |
| 89 | 3300042005 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 | Metagenome | Rhizosphere |
| 90 | 3300042006 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 | Metagenome | Rhizosphere |
| 91 | 3300042007 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 | Metagenome | Rhizosphere |
| 92 | 3300042010 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 | Metagenome | Rhizosphere |
| 93 | 3300042014 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 | Metagenome | Rhizosphere |
| 94 | 3300042115 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 | Metagenome | Rhizosphere |
| 95 | 3300042125 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 | Metagenome | Rhizosphere |
| 96 | 3300042128 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_070716_123 | Metagenome | Rhizosphere |
| 97 | 3300042133 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 | Metagenome | Rhizosphere |
| 98 | 3300042134 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 | Metagenome | Rhizosphere |
| 99 | 3300042135 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 | Metagenome | Rhizosphere |
| 100 | 3300042145 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 | Metagenome | Rhizosphere |
| 101 | 3300042185 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 | Metagenome | Rhizosphere |
| 102 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 103 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 104 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 105 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 106 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 107 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 108 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 109 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 110 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 111 | 3300044735 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R | Metagenome | Rhizosphere |
| 112 | 3300044842 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R | Metagenome | Rhizosphere |
| 113 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 114 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 115 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 116 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 117 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 118 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 119 | 3300046542 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere | Metagenome | Rhizosphere |
| 120 | 3300046615 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere | Metagenome | Rhizosphere |
| 121 | 3300046691 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere | Metagenome | Rhizosphere |
| 122 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 123 | 3300048924 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 | Metagenome | Unclassified |
| 124 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 125 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 126 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 127 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 128 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 129 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 130 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 131 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 132 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 134 | 3300049762 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_A_4_control | Metagenome | Rhizosphere |
| 135 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 136 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 137 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 138 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 139 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 140 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 141 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 142 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 143 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 144 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 145 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 146 | 3300053088 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere | Metagenome | Endosphere |
| 147 | 3300053093 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere | Metagenome | Endosphere |
| 148 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 149 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 150 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 151 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 90.09 |
| Metatranscriptomes | 0 |
| Isolates | 9.91 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 22.64 |
| Nodule | 0.94 |
| Rhizoplane | 0.47 |
| Rhizosphere | 59.43 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 16.51 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25151J46595_10005405 | 3300003187 | Bacteria | 6598 |
| 2 | rootH1_10029778 | 3300003316 | Bacteria | 1752 |
| 3 | rootL2_10037287 | 3300003322 | Bacteria | 1938 |
| 4 | Ga0068868_100140856 | 3300005338 | Bacteria | 1980 |
| 5 | Ga0070673_100279043 | 3300005364 | Bacteria | 1465 |
| 6 | Ga0070708_100271319 | 3300005445 | Bacteria | 1596 |
| 7 | Ga0070698_100096624 | 3300005471 | Bacteria | 2931 |
| 8 | Ga0068857_100409949 | 3300005577 | Bacteria | 1262 |
| 9 | Ga0068860_100229730 | 3300005843 | Bacteria | 1803 |
| 10 | Ga0075365_10002728 | 3300006038 | Bacteria | 8801 |
| 11 | Ga0075365_10040430 | 3300006038 | Bacteria | 3041 |
| 12 | Ga0075365_10044103 | 3300006038 | Bacteria | 2921 |
| 13 | Ga0075368_10007237 | 3300006042 | Bacteria | 3911 |
| 14 | Ga0075363_100011905 | 3300006048 | Bacteria | 4178 |
| 15 | Ga0075363_100033903 | 3300006048 | Bacteria | 2663 |
| 16 | Ga0075432_10011235 | 3300006058 | Bacteria | 3044 |
| 17 | Ga0075362_10005299 | 3300006177 | Bacteria | 4708 |
| 18 | Ga0075362_10005370 | 3300006177 | Bacteria | 4683 |
| 19 | Ga0075362_10091364 | 3300006177 | Bacteria | 1413 |
| 20 | Ga0075367_10004775 | 3300006178 | Bacteria | 6664 |
| 21 | Ga0075367_10033082 | 3300006178 | Bacteria | 2978 |
| 22 | Ga0075369_10002021 | 3300006186 | Bacteria | 7149 |
| 23 | Ga0075366_10000198 | 3300006195 | Bacteria | 26513 |
| 24 | Ga0075366_10007481 | 3300006195 | Bacteria | 6035 |
| 25 | Ga0075366_10035270 | 3300006195 | Bacteria | 2949 |
| 26 | Ga0075366_10047878 | 3300006195 | Bacteria | 2534 |
| 27 | Ga0075366_10069136 | 3300006195 | Bacteria | 2102 |
| 28 | Ga0075366_10155028 | 3300006195 | Bacteria | 1387 |
| 29 | Ga0075366_10186723 | 3300006195 | Bacteria | 1259 |
| 30 | Ga0075366_10267117 | 3300006195 | Bacteria | 1045 |
| 31 | Ga0075370_10008751 | 3300006353 | Bacteria | 5222 |
| 32 | Ga0075370_10015669 | 3300006353 | Bacteria | 4064 |
| 33 | Ga0075370_10029011 | 3300006353 | Bacteria | 3079 |
| 34 | Ga0075430_100010464 | 3300006846 | Bacteria | 7855 |
| 35 | Ga0075429_100002818 | 3300006880 | Bacteria | 14701 |
| 36 | Ga0079104_1000098 | 3300006946 | Bacteria | 129064 |
| 37 | Ga0105250_10022861 | 3300009092 | Bacteria | 2520 |
| 38 | Ga0114129_10064573 | 3300009147 | Bacteria | 5110 |
| 39 | Ga0105242_10009482 | 3300009176 | Bacteria | 7461 |
| 40 | Ga0105249_10478090 | 3300009553 | Bacteria | 1288 |
| 41 | Ga0157375_10208640 | 3300013308 | Bacteria | 2110 |
| 42 | Ga0157380_10685335 | 3300014326 | Bacteria | 1027 |
| 43 | Ga0157379_10037009 | 3300014968 | Bacteria | 4350 |
| 44 | Ga0183362_10001 | 3300015683 | Bacteria | 2046624 |
| 45 | Ga0163161_10058849 | 3300017792 | Bacteria | 2793 |
| 46 | Ga0207696_1031131 | 3300025711 | Bacteria | 1615 |
| 47 | Ga0207646_10187328 | 3300025922 | Bacteria | 1869 |
| 48 | Ga0207709_10000105 | 3300025935 | Bacteria | 130495 |
| 49 | Ga0207712_10203162 | 3300025961 | Bacteria | 1573 |
| 50 | Ga0207677_10136028 | 3300026023 | Bacteria | 1874 |
| 51 | Ga0209281_1000002 | 3300027111 | Bacteria | 1924012 |
| 52 | Ga0209974_10012949 | 3300027876 | Bacteria | 2784 |
| 53 | Ga0207428_10377980 | 3300027907 | Bacteria | 1040 |
| 54 | Ga0307515_10000028 | 3300028794 | Bacteria | 368467 |
| 55 | Ga0307515_10019963 | 3300028794 | Bacteria | 12005 |
| 56 | Ga0316181_1022476 | 3300030744 | Bacteria | 1219 |
| 57 | Ga0316182_1345447 | 3300030745 | Bacteria | 3814 |
| 58 | Ga0265330_10000062 | 3300031235 | Bacteria | 95409 |
| 59 | Ga0265332_10000001 | 3300031238 | Bacteria | 863783 |
| 60 | Ga0265325_10006905 | 3300031241 | Bacteria | 6851 |
| 61 | Ga0265340_10023038 | 3300031247 | Bacteria | 3178 |
| 62 | Ga0265327_10000731 | 3300031251 | Bacteria | 51292 |
| 63 | Ga0307513_10244309 | 3300031456 | Bacteria | 1597 |
| 64 | Ga0307509_10204033 | 3300031507 | Bacteria | 1810 |
| 65 | Ga0307408_100000095 | 3300031548 | Bacteria | 97142 |
| 66 | Ga0307408_100038821 | 3300031548 | Bacteria | 3361 |
| 67 | Ga0265314_10000145 | 3300031711 | Bacteria | 106541 |
| 68 | Ga0265314_10031885 | 3300031711 | Bacteria | 3884 |
| 69 | Ga0265342_10044085 | 3300031712 | Bacteria | 2690 |
| 70 | Ga0307516_10086952 | 3300031730 | Bacteria | 2961 |
| 71 | Ga0307516_10117139 | 3300031730 | Bacteria | 2458 |
| 72 | Ga0307405_10066504 | 3300031731 | Bacteria | 2298 |
| 73 | Ga0307405_10150461 | 3300031731 | Bacteria | 1636 |
| 74 | Ga0307406_10027653 | 3300031901 | Bacteria | 3419 |
| 75 | Ga0307406_10255679 | 3300031901 | Bacteria | 1322 |
| 76 | Ga0307412_10052697 | 3300031911 | Bacteria | 2695 |
| 77 | Ga0307412_10561764 | 3300031911 | Bacteria | 960 |
| 78 | Ga0307416_100047323 | 3300032002 | Bacteria | 3403 |
| 79 | Ga0307416_100488897 | 3300032002 | Bacteria | 1292 |
| 80 | Ga0395905_0009497 | 3300037471 | Bacteria | 9506 |
| 81 | Ga0395905_0121238 | 3300037471 | Bacteria | 2458 |
| 82 | Ga0439436_0001255 | 3300041404 | Bacteria | 7234 |
| 83 | Ga0439436_0020084 | 3300041404 | Bacteria | 1990 |
| 84 | Ga0439438_060258 | 3300041405 | Bacteria | 951 |
| 85 | Ga0439439_0006916 | 3300041406 | Bacteria | 2634 |
| 86 | Ga0439439_0020945 | 3300041406 | Bacteria | 1626 |
| 87 | Ga0439461_0023697 | 3300041410 | Bacteria | 1236 |
| 88 | Ga0439466_0008910 | 3300041411 | Bacteria | 3773 |
| 89 | Ga0439466_0050664 | 3300041411 | Bacteria | 1361 |
| 90 | Ga0439465_0000994 | 3300041413 | Bacteria | 9027 |
| 91 | Ga0451853_0739771 | 3300041512 | Bacteria | 1250 |
| 92 | Ga0439431_0005340 | 3300041997 | Bacteria | 2835 |
| 93 | Ga0439442_007533 | 3300042002 | Bacteria | 2190 |
| 94 | Ga0439445_0004381 | 3300042004 | Bacteria | 3200 |
| 95 | Ga0439445_0007804 | 3300042004 | Bacteria | 2492 |
| 96 | Ga0439448_0069484 | 3300042005 | Bacteria | 1172 |
| 97 | Ga0439432_004930 | 3300042006 | Bacteria | 4833 |
| 98 | Ga0439432_006321 | 3300042006 | Bacteria | 4237 |
| 99 | Ga0439449_0000471 | 3300042007 | Bacteria | 15048 |
| 100 | Ga0439449_0001807 | 3300042007 | Bacteria | 8416 |
| 101 | Ga0439452_009416 | 3300042010 | Bacteria | 2877 |
| 102 | Ga0439452_009459 | 3300042010 | Bacteria | 2869 |
| 103 | Ga0439457_002812 | 3300042014 | Bacteria | 4867 |
| 104 | Ga0439457_011450 | 3300042014 | Bacteria | 2018 |
| 105 | Ga0450911_000104 | 3300042115 | Bacteria | 34662 |
| 106 | Ga0450923_001922 | 3300042125 | Bacteria | 2871 |
| 107 | Ga0450897_001619 | 3300042128 | Bacteria | 1559 |
| 108 | Ga0450896_006954 | 3300042133 | Bacteria | 1557 |
| 109 | Ga0450898_015891 | 3300042134 | Bacteria | 1279 |
| 110 | Ga0450899_001650 | 3300042135 | Bacteria | 2464 |
| 111 | Ga0450906_010933 | 3300042145 | Bacteria | 1705 |
| 112 | Ga0450909_003452 | 3300042185 | Bacteria | 2253 |
| 113 | Ga0439434_0004129 | 3300042435 | Bacteria | 4241 |
| 114 | Ga0451577_0074755 | 3300042876 | Bacteria | 3021 |
| 115 | Ga0466969_0025609 | 3300044656 | Bacteria | 3031 |
| 116 | Ga0466965_0000398 | 3300044683 | Bacteria | 14891 |
| 117 | Ga0466965_0009678 | 3300044683 | Bacteria | 4480 |
| 118 | Ga0466965_0026335 | 3300044683 | Bacteria | 2819 |
| 119 | Ga0466966_0002338 | 3300044684 | Bacteria | 12370 |
| 120 | Ga0466966_0002618 | 3300044684 | Bacteria | 11789 |
| 121 | Ga0466961_0014636 | 3300044693 | Bacteria | 5039 |
| 122 | Ga0466961_0029706 | 3300044693 | Bacteria | 3511 |
| 123 | Ga0466964_0012386 | 3300044706 | Bacteria | 3227 |
| 124 | Ga0453684_0005726 | 3300044712 | Bacteria | 24318 |
| 125 | Ga0453684_0049789 | 3300044712 | Bacteria | 5519 |
| 126 | Ga0453684_1040000 | 3300044712 | Bacteria | 869 |
| 127 | Ga0466971_0014890 | 3300044719 | Bacteria | 3422 |
| 128 | Ga0466968_0008431 | 3300044735 | Bacteria | 3947 |
| 129 | Ga0466957_0005705 | 3300044842 | Bacteria | 7000 |
| 130 | Ga0466960_0140516 | 3300044901 | Bacteria | 1282 |
| 131 | Ga0466960_0293633 | 3300044901 | Bacteria | 914 |
| 132 | Ga0466959_0012788 | 3300045049 | Bacteria | 6073 |
| 133 | Ga0451576_0005477 | 3300045051 | Bacteria | 15899 |
| 134 | Ga0451576_0031974 | 3300045051 | Bacteria | 5608 |
| 135 | Ga0466958_0005377 | 3300045836 | Bacteria | 6881 |
| 136 | Ga0495643_0077281 | 3300046522 | Bacteria | 1740 |
| 137 | Ga0495621_0004989 | 3300046539 | Bacteria | 3781 |
| 138 | Ga0495597_0000324 | 3300046542 | Bacteria | 43211 |
| 139 | Ga0495656_0000514 | 3300046615 | Bacteria | 12644 |
| 140 | Ga0495656_0061869 | 3300046615 | Bacteria | 1636 |
| 141 | Ga0495670_0327206 | 3300046691 | Bacteria | 823 |
| 142 | Ga0496114_0336665 | 3300048917 | Bacteria | 1334 |
| 143 | Ga0496121_0006612 | 3300048924 | Bacteria | 14299 |
| 144 | Ga0496122_0001764 | 3300048925 | Bacteria | 33192 |
| 145 | Ga0496122_0009317 | 3300048925 | Bacteria | 10375 |
| 146 | Ga0496123_0011365 | 3300048926 | Bacteria | 7727 |
| 147 | Ga0496124_0048642 | 3300048927 | Bacteria | 3622 |
| 148 | Ga0496124_0151224 | 3300048927 | Bacteria | 1820 |
| 149 | Ga0496124_0249921 | 3300048927 | Bacteria | 1312 |
| 150 | Ga0496125_0000621 | 3300048928 | Bacteria | 59634 |
| 151 | Ga0496125_0006734 | 3300048928 | Bacteria | 12349 |
| 152 | Ga0496125_0009493 | 3300048928 | Bacteria | 9987 |
| 153 | Ga0496125_0017797 | 3300048928 | Bacteria | 6763 |
| 154 | Ga0496125_0068871 | 3300048928 | Bacteria | 2780 |
| 155 | Ga0501031_0001100 | 3300049568 | Bacteria | 16481 |
| 156 | Ga0501032_0032390 | 3300049569 | Bacteria | 3582 |
| 157 | Ga0501043_0000010 | 3300049579 | Bacteria | 206374 |
| 158 | Ga0501046_0000097 | 3300049580 | Bacteria | 93650 |
| 159 | Ga0501046_0219288 | 3300049580 | Bacteria | 1409 |
| 160 | Ga0501047_0000026 | 3300049581 | Bacteria | 225296 |
| 161 | Ga0501048_0014474 | 3300049582 | Bacteria | 5840 |
| 162 | Ga0501265_003211 | 3300049762 | Bacteria | 1860 |
| 163 | Ga0501045_0019046 | 3300049824 | Bacteria | 4888 |
| 164 | nmdc:mga03n38_21541_c1 | 3300050490 | Bacteria | 2596 |
| 165 | nmdc:mga03n38_62084_c1 | 3300050490 | Bacteria | 1703 |
| 166 | nmdc:mga00v17_17443_c1 | 3300050491 | Bacteria | 4065 |
| 167 | nmdc:mga00v17_7405_c1 | 3300050491 | Bacteria | 5855 |
| 168 | nmdc:mga0yw44_198914_c1 | 3300050492 | Bacteria | 1323 |
| 169 | nmdc:mga0yw44_4731_c1 | 3300050492 | Bacteria | 6301 |
| 170 | nmdc:mga0yw44_81230_c1 | 3300050492 | Bacteria | 2032 |
| 171 | nmdc:mga0k408_11725_c1 | 3300050493 | Bacteria | 4780 |
| 172 | nmdc:mga0k408_25020_c1 | 3300050493 | Bacteria | 3378 |
| 173 | nmdc:mga0k408_357_c1 | 3300050493 | Bacteria | 25142 |
| 174 | nmdc:mga0k408_35_c1 | 3300050493 | Bacteria | 25383 |
| 175 | nmdc:mga0k408_4903_c2 | 3300050493 | Bacteria | 6764 |
| 176 | nmdc:mga06z11_1160_c1 | 3300050494 | Bacteria | 9638 |
| 177 | nmdc:mga06z11_61033_c1 | 3300050494 | Bacteria | 1965 |
| 178 | nmdc:mga07m45_746_c1 | 3300050496 | Bacteria | 13911 |
| 179 | nmdc:mga07m45_7753_c1 | 3300050496 | Bacteria | 5494 |
| 180 | nmdc:mga05p37_66568_c1 | 3300050507 | Bacteria | 4431 |
| 181 | nmdc:mga09592_2105_c1 | 3300050508 | Bacteria | 16074 |
| 182 | nmdc:mga0qj67_12108_c1 | 3300050509 | Bacteria | 6487 |
| 183 | nmdc:mga0sz30_1596_c1 | 3300050516 | Bacteria | 8076 |
| 184 | Ga0500644_0027464 | 3300053088 | Bacteria | 1771 |
| 185 | Ga0500651_0046666 | 3300053093 | Bacteria | 2725 |
| 186 | Ga0500562_001059 | 3300053108 | Bacteria | 6754 |
| 187 | Ga0500559_0001867 | 3300053136 | Bacteria | 11465 |
| 188 | Ga0500559_0047442 | 3300053136 | Bacteria | 1886 |
| 189 | Ga0500559_0131982 | 3300053136 | Bacteria | 1167 |
| 190 | Ga0500616_0023859 | 3300053153 | Bacteria | 3404 |
| 191 | Ga0466962_0002578 | 3300061719 | Bacteria | 8606 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300049568 | Ga0501031_0001100 | Ga0501031_0001100_15787_16470 | 205 |
| 2 | 3300044901 | Ga0466960_0293633 | Ga0466960_0293633_27_719 | 219 |
| 3 | 3300027876 | Ga0209974_10012949 | Ga0209974_100129494 | 229 |
| 4 | 3300003322 | rootL2_10037287 | rootL2_100372872 | 240 |
| 5 | 3300006038 | Ga0075365_10002728 | Ga0075365_100027281 | 240 |
| 6 | 3300006042 | Ga0075368_10007237 | Ga0075368_100072373 | 240 |
| 7 | 3300006048 | Ga0075363_100011905 | Ga0075363_1000119053 | 240 |
| 8 | 3300006177 | Ga0075362_10005370 | Ga0075362_100053703 | 240 |
| 9 | 3300006178 | Ga0075367_10004775 | Ga0075367_100047756 | 240 |
| 10 | 3300006186 | Ga0075369_10002021 | Ga0075369_100020213 | 240 |
| 11 | 3300006353 | Ga0075370_10029011 | Ga0075370_100290112 | 240 |
| 12 | 3300044656 | Ga0466969_0025609 | Ga0466969_0025609_376_1152 | 240 |
| 13 | 3300044683 | Ga0466965_0000398 | Ga0466965_0000398_10866_11642 | 240 |
| 14 | 3300044684 | Ga0466966_0002338 | Ga0466966_0002338_10665_11441 | 240 |
| 15 | 3300044693 | Ga0466961_0029706 | Ga0466961_0029706_1303_2079 | 240 |
| 16 | 3300044706 | Ga0466964_0012386 | Ga0466964_0012386_121_897 | 240 |
| 17 | 3300044719 | Ga0466971_0014890 | Ga0466971_0014890_1297_2073 | 240 |
| 18 | 3300044735 | Ga0466968_0008431 | Ga0466968_0008431_1817_2593 | 240 |
| 19 | 3300044842 | Ga0466957_0005705 | Ga0466957_0005705_3503_4279 | 240 |
| 20 | 3300045049 | Ga0466959_0012788 | Ga0466959_0012788_2491_3267 | 240 |
| 21 | 3300045836 | Ga0466958_0005377 | Ga0466958_0005377_5211_5987 | 240 |
| 22 | 3300050490 | nmdc:mga03n38_21541_c1 | nmdc:mga03n38_21541_c1_1612_2415 | 240 |
| 23 | 3300050491 | nmdc:mga00v17_17443_c1 | nmdc:mga00v17_17443_c1_1860_2663 | 240 |
| 24 | 3300050492 | nmdc:mga0yw44_4731_c1 | nmdc:mga0yw44_4731_c1_858_1661 | 240 |
| 25 | 3300050493 | nmdc:mga0k408_357_c1 | nmdc:mga0k408_357_c1_14442_15245 | 240 |
| 26 | 3300050494 | nmdc:mga06z11_1160_c1 | nmdc:mga06z11_1160_c1_1432_2235 | 240 |
| 27 | 3300050496 | nmdc:mga07m45_746_c1 | nmdc:mga07m45_746_c1_3204_4007 | 240 |
| 28 | 3300050516 | nmdc:mga0sz30_1596_c1 | nmdc:mga0sz30_1596_c1_6180_6983 | 240 |
| 29 | 3300061719 | Ga0466962_0002578 | Ga0466962_0002578_6534_7310 | 240 |
| 30 | 3300005471 | Ga0070698_100096624 | Ga0070698_1000966243 | 241 |
| 31 | 3300006178 | Ga0075367_10033082 | Ga0075367_100330823 | 241 |
| 32 | 3300006353 | Ga0075370_10015669 | Ga0075370_100156694 | 241 |
| 33 | 3300025922 | Ga0207646_10187328 | Ga0207646_101873283 | 241 |
| 34 | 3300050494 | nmdc:mga06z11_61033_c1 | nmdc:mga06z11_61033_c1_204_1004 | 241 |
| 35 | 3300048927 | Ga0496124_0048642 | Ga0496124_0048642_2206_2994 | 246 |
| 36 | 3300048928 | Ga0496125_0068871 | Ga0496125_0068871_978_1766 | 246 |
| 37 | 3300009553 | Ga0105249_10478090 | Ga0105249_104780902 | 247 |
| 38 | 3300009176 | Ga0105242_10009482 | Ga0105242_100094823 | 248 |
| 39 | 3300032002 | Ga0307416_100488897 | Ga0307416_1004888971 | 248 |
| 40 | 3300044712 | Ga0453684_1040000 | Ga0453684_1040000_32_823 | 248 |
| 41 | iso_pu_bacteria | 2939631187 | 2939632580 | 248 |
| 42 | 3300006195 | Ga0075366_10000198 | Ga0075366_100001983 | 249 |
| 43 | 3300048925 | Ga0496122_0009317 | Ga0496122_0009317_9179_9946 | 249 |
| 44 | 3300048926 | Ga0496123_0011365 | Ga0496123_0011365_5341_6108 | 249 |
| 45 | 3300048928 | Ga0496125_0000621 | Ga0496125_0000621_8234_9001 | 249 |
| 46 | 3300050493 | nmdc:mga0k408_35_c1 | nmdc:mga0k408_35_c1_23025_23819 | 249 |
| 47 | iso_pu_bacteria | 2885192300 | 2885192920 | 249 |
| 48 | 3300005445 | Ga0070708_100271319 | Ga0070708_1002713192 | 250 |
| 49 | 3300009147 | Ga0114129_10064573 | Ga0114129_100645735 | 250 |
| 50 | 3300050507 | nmdc:mga05p37_66568_c1 | nmdc:mga05p37_66568_c1_2154_2921 | 250 |
| 51 | iso_pu_bacteria | 2842733646 | 2842736845 | 251 |
| 52 | 3300013308 | Ga0157375_10208640 | Ga0157375_102086402 | 252 |
| 53 | 3300014326 | Ga0157380_10685335 | Ga0157380_106853352 | 252 |
| 54 | 3300017792 | Ga0163161_10058849 | Ga0163161_100588492 | 252 |
| 55 | 3300025935 | Ga0207709_10000105 | Ga0207709_1000010511 | 252 |
| 56 | 3300046539 | Ga0495621_0004989 | Ga0495621_0004989_734_1492 | 252 |
| 57 | 3300046615 | Ga0495656_0000514 | Ga0495656_0000514_7111_7869 | 252 |
| 58 | 3300046691 | Ga0495670_0327206 | Ga0495670_0327206_54_812 | 252 |
| 59 | iso_pu_bacteria | 2643221609 | 2644057016 | 252 |
| 60 | iso_pu_bacteria | 2643221611 | 2644070853 | 252 |
| 61 | iso_pu_bacteria | 2738543012 | 2739244049 | 252 |
| 62 | iso_pu_bacteria | 2816332133 | 2816472375 | 252 |
| 63 | iso_pu_bacteria | 2919704043 | 2919704479 | 252 |
| 64 | iso_pu_bacteria | 2928115317 | 2928115888 | 252 |
| 65 | iso_pu_bacteria | 2954767861 | 2954771914 | 252 |
| 66 | 3300005577 | Ga0068857_100409949 | Ga0068857_1004099492 | 253 |
| 67 | 3300006048 | Ga0075363_100033903 | Ga0075363_1000339034 | 253 |
| 68 | 3300006177 | Ga0075362_10005299 | Ga0075362_100052995 | 253 |
| 69 | 3300006195 | Ga0075366_10155028 | Ga0075366_101550282 | 253 |
| 70 | 3300006195 | Ga0075366_10186723 | Ga0075366_101867232 | 253 |
| 71 | 3300015683 | Ga0183362_10001 | Ga0183362_100011624 | 253 |
| 72 | 3300028794 | Ga0307515_10000028 | Ga0307515_10000028226 | 253 |
| 73 | 3300031251 | Ga0265327_10000731 | Ga0265327_1000073154 | 253 |
| 74 | 3300031548 | Ga0307408_100038821 | Ga0307408_1000388212 | 253 |
| 75 | 3300031731 | Ga0307405_10066504 | Ga0307405_100665043 | 253 |
| 76 | 3300031911 | Ga0307412_10052697 | Ga0307412_100526973 | 253 |
| 77 | 3300032002 | Ga0307416_100047323 | Ga0307416_1000473234 | 253 |
| 78 | 3300041404 | Ga0439436_0001255 | Ga0439436_0001255_2846_3607 | 253 |
| 79 | 3300041404 | Ga0439436_0020084 | Ga0439436_0020084_1009_1770 | 253 |
| 80 | 3300041405 | Ga0439438_060258 | Ga0439438_060258_121_882 | 253 |
| 81 | 3300041406 | Ga0439439_0006916 | Ga0439439_0006916_1855_2616 | 253 |
| 82 | 3300041406 | Ga0439439_0020945 | Ga0439439_0020945_110_871 | 253 |
| 83 | 3300041410 | Ga0439461_0023697 | Ga0439461_0023697_343_1104 | 253 |
| 84 | 3300041411 | Ga0439466_0008910 | Ga0439466_0008910_300_1061 | 253 |
| 85 | 3300041411 | Ga0439466_0050664 | Ga0439466_0050664_462_1223 | 253 |
| 86 | 3300041413 | Ga0439465_0000994 | Ga0439465_0000994_4070_4831 | 253 |
| 87 | 3300041512 | Ga0451853_0739771 | Ga0451853_0739771_225_1010 | 253 |
| 88 | 3300041997 | Ga0439431_0005340 | Ga0439431_0005340_799_1560 | 253 |
| 89 | 3300042002 | Ga0439442_007533 | Ga0439442_007533_31_792 | 253 |
| 90 | 3300042004 | Ga0439445_0004381 | Ga0439445_0004381_1261_2022 | 253 |
| 91 | 3300042004 | Ga0439445_0007804 | Ga0439445_0007804_1004_1765 | 253 |
| 92 | 3300042006 | Ga0439432_004930 | Ga0439432_004930_871_1632 | 253 |
| 93 | 3300042006 | Ga0439432_006321 | Ga0439432_006321_405_1166 | 253 |
| 94 | 3300042007 | Ga0439449_0000471 | Ga0439449_0000471_12305_13066 | 253 |
| 95 | 3300042007 | Ga0439449_0001807 | Ga0439449_0001807_6809_7570 | 253 |
| 96 | 3300042010 | Ga0439452_009416 | Ga0439452_009416_1377_2138 | 253 |
| 97 | 3300042010 | Ga0439452_009459 | Ga0439452_009459_937_1698 | 253 |
| 98 | 3300042014 | Ga0439457_002812 | Ga0439457_002812_2591_3352 | 253 |
| 99 | 3300042014 | Ga0439457_011450 | Ga0439457_011450_1227_1988 | 253 |
| 100 | 3300042125 | Ga0450923_001922 | Ga0450923_001922_341_1102 | 253 |
| 101 | 3300042128 | Ga0450897_001619 | Ga0450897_001619_164_925 | 253 |
| 102 | 3300042133 | Ga0450896_006954 | Ga0450896_006954_739_1500 | 253 |
| 103 | 3300042134 | Ga0450898_015891 | Ga0450898_015891_159_920 | 253 |
| 104 | 3300042135 | Ga0450899_001650 | Ga0450899_001650_1034_1795 | 253 |
| 105 | 3300042145 | Ga0450906_010933 | Ga0450906_010933_481_1242 | 253 |
| 106 | 3300042185 | Ga0450909_003452 | Ga0450909_003452_1335_2096 | 253 |
| 107 | 3300042435 | Ga0439434_0004129 | Ga0439434_0004129_1282_2043 | 253 |
| 108 | 3300044683 | Ga0466965_0009678 | Ga0466965_0009678_2469_3230 | 253 |
| 109 | 3300044901 | Ga0466960_0140516 | Ga0466960_0140516_361_1122 | 253 |
| 110 | 3300050490 | nmdc:mga03n38_62084_c1 | nmdc:mga03n38_62084_c1_540_1301 | 253 |
| 111 | 3300050493 | nmdc:mga0k408_11725_c1 | nmdc:mga0k408_11725_c1_3897_4658 | 253 |
| 112 | iso_pu_bacteria | 2738543013 | 2739249314 | 253 |
| 113 | 3300031731 | Ga0307405_10150461 | Ga0307405_101504611 | 254 |
| 114 | 3300031911 | Ga0307412_10561764 | Ga0307412_105617642 | 254 |
| 115 | 3300046615 | Ga0495656_0061869 | Ga0495656_0061869_769_1533 | 254 |
| 116 | iso_pu_bacteria | 2904479285 | 2904481835 | 254 |
| 117 | 3300031730 | Ga0307516_10086952 | Ga0307516_100869522 | 255 |
| 118 | 3300042005 | Ga0439448_0069484 | Ga0439448_0069484_304_1080 | 255 |
| 119 | 3300053136 | Ga0500559_0001867 | Ga0500559_0001867_8161_8928 | 255 |
| 120 | 3300053136 | Ga0500559_0047442 | Ga0500559_0047442_804_1571 | 255 |
| 121 | 3300006058 | Ga0075432_10011235 | Ga0075432_100112352 | 256 |
| 122 | 3300006177 | Ga0075362_10091364 | Ga0075362_100913642 | 256 |
| 123 | 3300027907 | Ga0207428_10377980 | Ga0207428_103779802 | 256 |
| 124 | 3300028794 | Ga0307515_10019963 | Ga0307515_100199635 | 256 |
| 125 | 3300030744 | Ga0316181_1022476 | Ga0316181_10224762 | 256 |
| 126 | 3300030745 | Ga0316182_1345447 | Ga0316182_13454475 | 256 |
| 127 | 3300031235 | Ga0265330_10000062 | Ga0265330_1000006254 | 256 |
| 128 | 3300031238 | Ga0265332_10000001 | Ga0265332_10000001392 | 256 |
| 129 | 3300031241 | Ga0265325_10006905 | Ga0265325_100069052 | 256 |
| 130 | 3300031247 | Ga0265340_10023038 | Ga0265340_100230384 | 256 |
| 131 | 3300031711 | Ga0265314_10000145 | Ga0265314_1000014548 | 256 |
| 132 | 3300031901 | Ga0307406_10255679 | Ga0307406_102556792 | 256 |
| 133 | 3300049580 | Ga0501046_0219288 | Ga0501046_0219288_75_884 | 256 |
| 134 | 3300053088 | Ga0500644_0027464 | Ga0500644_0027464_215_1021 | 256 |
| 135 | 3300053093 | Ga0500651_0046666 | Ga0500651_0046666_692_1480 | 256 |
| 136 | 3300053108 | Ga0500562_001059 | Ga0500562_001059_2622_3428 | 256 |
| 137 | 3300053153 | Ga0500616_0023859 | Ga0500616_0023859_2155_2961 | 256 |
| 138 | iso_pu_bacteria | 2643221596 | 2643991287 | 256 |
| 139 | iso_pu_bacteria | 2842747753 | 2842747917 | 256 |
| 140 | iso_pu_bacteria | 2990710928 | 2990713278 | 256 |
| 141 | 3300006038 | Ga0075365_10040430 | Ga0075365_100404304 | 257 |
| 142 | 3300006038 | Ga0075365_10044103 | Ga0075365_100441033 | 257 |
| 143 | 3300006195 | Ga0075366_10007481 | Ga0075366_100074817 | 257 |
| 144 | 3300044712 | Ga0453684_0005726 | Ga0453684_0005726_22685_23488 | 257 |
| 145 | 3300050492 | nmdc:mga0yw44_198914_c1 | nmdc:mga0yw44_198914_c1_311_1084 | 257 |
| 146 | 3300050492 | nmdc:mga0yw44_81230_c1 | nmdc:mga0yw44_81230_c1_20_796 | 257 |
| 147 | 3300050493 | nmdc:mga0k408_4903_c2 | nmdc:mga0k408_4903_c2_1902_2708 | 257 |
| 148 | 3300003316 | rootH1_10029778 | rootH1_100297782 | 258 |
| 149 | 3300005338 | Ga0068868_100140856 | Ga0068868_1001408562 | 258 |
| 150 | 3300005364 | Ga0070673_100279043 | Ga0070673_1002790432 | 258 |
| 151 | 3300005843 | Ga0068860_100229730 | Ga0068860_1002297303 | 258 |
| 152 | 3300006195 | Ga0075366_10035270 | Ga0075366_100352702 | 258 |
| 153 | 3300006195 | Ga0075366_10047878 | Ga0075366_100478782 | 258 |
| 154 | 3300006195 | Ga0075366_10069136 | Ga0075366_100691362 | 258 |
| 155 | 3300006353 | Ga0075370_10008751 | Ga0075370_100087513 | 258 |
| 156 | 3300014968 | Ga0157379_10037009 | Ga0157379_100370093 | 258 |
| 157 | 3300025961 | Ga0207712_10203162 | Ga0207712_102031623 | 258 |
| 158 | 3300026023 | Ga0207677_10136028 | Ga0207677_101360282 | 258 |
| 159 | 3300031456 | Ga0307513_10244309 | Ga0307513_102443091 | 258 |
| 160 | 3300031507 | Ga0307509_10204033 | Ga0307509_102040332 | 258 |
| 161 | 3300031711 | Ga0265314_10031885 | Ga0265314_100318855 | 258 |
| 162 | 3300031712 | Ga0265342_10044085 | Ga0265342_100440853 | 258 |
| 163 | 3300031730 | Ga0307516_10117139 | Ga0307516_101171393 | 258 |
| 164 | 3300037471 | Ga0395905_0009497 | Ga0395905_0009497_4966_5745 | 258 |
| 165 | 3300037471 | Ga0395905_0121238 | Ga0395905_0121238_692_1471 | 258 |
| 166 | 3300042115 | Ga0450911_000104 | Ga0450911_000104_10412_11224 | 258 |
| 167 | 3300042876 | Ga0451577_0074755 | Ga0451577_0074755_645_1433 | 258 |
| 168 | 3300044683 | Ga0466965_0026335 | Ga0466965_0026335_750_1529 | 258 |
| 169 | 3300044684 | Ga0466966_0002618 | Ga0466966_0002618_6555_7334 | 258 |
| 170 | 3300044693 | Ga0466961_0014636 | Ga0466961_0014636_216_995 | 258 |
| 171 | 3300045051 | Ga0451576_0031974 | Ga0451576_0031974_2407_3195 | 258 |
| 172 | 3300046522 | Ga0495643_0077281 | Ga0495643_0077281_424_1227 | 258 |
| 173 | 3300048924 | Ga0496121_0006612 | Ga0496121_0006612_4697_5509 | 258 |
| 174 | 3300048925 | Ga0496122_0001764 | Ga0496122_0001764_6877_7653 | 258 |
| 175 | 3300048927 | Ga0496124_0151224 | Ga0496124_0151224_17_793 | 258 |
| 176 | 3300048927 | Ga0496124_0249921 | Ga0496124_0249921_267_1079 | 258 |
| 177 | 3300048928 | Ga0496125_0006734 | Ga0496125_0006734_6494_7306 | 258 |
| 178 | 3300048928 | Ga0496125_0009493 | Ga0496125_0009493_3357_4169 | 258 |
| 179 | 3300048928 | Ga0496125_0017797 | Ga0496125_0017797_5824_6636 | 258 |
| 180 | 3300049762 | Ga0501265_003211 | Ga0501265_003211_12_815 | 258 |
| 181 | 3300050493 | nmdc:mga0k408_25020_c1 | nmdc:mga0k408_25020_c1_881_1675 | 258 |
| 182 | 3300050496 | nmdc:mga07m45_7753_c1 | nmdc:mga07m45_7753_c1_3811_4605 | 258 |
| 183 | iso_pu_bacteria | 2547132374 | 2548498198 | 258 |
| 184 | iso_pu_bacteria | 2643221717 | 2644648730 | 258 |
| 185 | 3300006195 | Ga0075366_10267117 | Ga0075366_102671172 | 259 |
| 186 | 3300006846 | Ga0075430_100010464 | Ga0075430_1000104645 | 259 |
| 187 | 3300006880 | Ga0075429_100002818 | Ga0075429_1000028182 | 259 |
| 188 | 3300031548 | Ga0307408_100000095 | Ga0307408_1000000958 | 259 |
| 189 | 3300031901 | Ga0307406_10027653 | Ga0307406_100276533 | 259 |
| 190 | 3300044712 | Ga0453684_0049789 | Ga0453684_0049789_3740_4531 | 259 |
| 191 | 3300045051 | Ga0451576_0005477 | Ga0451576_0005477_1514_2305 | 259 |
| 192 | 3300046542 | Ga0495597_0000324 | Ga0495597_0000324_23334_24155 | 259 |
| 193 | 3300048917 | Ga0496114_0336665 | Ga0496114_0336665_160_939 | 259 |
| 194 | 3300049569 | Ga0501032_0032390 | Ga0501032_0032390_951_1748 | 259 |
| 195 | 3300049579 | Ga0501043_0000010 | Ga0501043_0000010_15205_16002 | 259 |
| 196 | 3300049580 | Ga0501046_0000097 | Ga0501046_0000097_16520_17317 | 259 |
| 197 | 3300049581 | Ga0501047_0000026 | Ga0501047_0000026_209354_210151 | 259 |
| 198 | 3300049582 | Ga0501048_0014474 | Ga0501048_0014474_685_1482 | 259 |
| 199 | 3300049824 | Ga0501045_0019046 | Ga0501045_0019046_650_1447 | 259 |
| 200 | 3300050508 | nmdc:mga09592_2105_c1 | nmdc:mga09592_2105_c1_10874_11692 | 259 |
| 201 | 3300050509 | nmdc:mga0qj67_12108_c1 | nmdc:mga0qj67_12108_c1_1331_2149 | 259 |
| 202 | 3300053136 | Ga0500559_0131982 | Ga0500559_0131982_229_1014 | 259 |
| 203 | iso_pu_bacteria | 2643221570 | 2643867478 | 259 |
| 204 | iso_pu_bacteria | 2643221652 | 2644295091 | 259 |
| 205 | 3300003187 | JGI25151J46595_10005405 | JGI25151J46595_100054054 | 260 |
| 206 | 3300006946 | Ga0079104_1000098 | Ga0079104_1000098111 | 260 |
| 207 | 3300009092 | Ga0105250_10022861 | Ga0105250_100228614 | 260 |
| 208 | 3300025711 | Ga0207696_1031131 | Ga0207696_10311312 | 260 |
| 209 | 3300027111 | Ga0209281_1000002 | Ga0209281_10000021754 | 260 |
| 210 | 3300050491 | nmdc:mga00v17_7405_c1 | nmdc:mga00v17_7405_c1_371_1153 | 260 |
| 211 | iso_pu_bacteria | 2721755523 | 2722884811 | 260 |
| 212 | iso_pu_bacteria | 2839138175 | 2839144412 | 260 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5k8k-assembly1.cif.gz_A | structure of the haemophilus influenzae lpxh-lipid x complex | 0.9211 | 21 | 260 |
| 6ph9-assembly1.cif.gz_A | crystal structure of the klebsiella pneumoniae lpxh-lipid x complex | 0.9168 | 22 | 258 |
| 7ss7-assembly1.cif.gz_A | crystal structure of klebsiella lpxh in complex with jh-lph-50 | 0.9153 | 23 | 258 |
| 6pib-assembly1.cif.gz_A | structure of the klebsiella pneumoniae lpxh-az1 complex | 0.915 | 22 | 258 |
| 5b49-assembly1.cif.gz_A | crystal structure of lpxh with manganese from pseudomonas aeruginosa | 0.9138 | 23 | 258 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_P43341_2_237_2.40.10.10 | Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases | 0.9174 | 23 | 257 | 2.40.10.10 |
| af_P43341_2_237_2.40.10.10 | Mainly Beta;Beta Barrel;Thrombin, subunit H;Trypsin-like serine proteases | 0.9062 | 23 | 257 | 2.40.10.10 |
| af_Q4DWH1_2_191_3.60.21.10 | Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases | 0.6823 | 22 | 250 | 3.60.21.10 |
| af_A4I7S2_2_176_3.60.21.10 | Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases | 0.6757 | 22 | 257 | 3.60.21.10 |
| af_Q5AB94_1_173_3.60.21.10 | Alpha Beta;4-Layer Sandwich;Purple Acid Phosphatase; chain A, domain 2;Metallo-dependent phosphatases | 0.6756 | 23 | 234 | 3.60.21.10 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A0U3F7V1-F1-model_v4 | UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.54) (UDP-2,3-diacylglucosamine diphosphatase) | 0.9853 | 11 | 260 |
GO:0005737
GO:0008758 GO:0009245 GO:0019897 GO:0030145 |
| AF-A0A398CAD3-F1-model_v4 | UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.54) (UDP-2,3-diacylglucosamine diphosphatase) | 0.9848 | 11 | 259 |
GO:0005737
GO:0008758 GO:0009245 GO:0019897 GO:0030145 |
| AF-A0A7T1GQ95-F1-model_v4 | UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.54) (UDP-2,3-diacylglucosamine diphosphatase) | 0.9822 | 11 | 260 |
GO:0005737
GO:0008758 GO:0009245 GO:0019897 GO:0030145 |
| AF-A0A519H0L0-F1-model_v4 | UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) | 0.9802 | 50 | 260 |
GO:0005737
GO:0005886 GO:0008758 GO:0009245 GO:0046872 |
| AF-A0A519H0L0-F1-model_v4 | UDP-2,3-diacylglucosamine diphosphatase (EC 3.6.1.54) | 0.9756 | 50 | 260 |
GO:0005737
GO:0005886 GO:0008758 GO:0009245 GO:0046872 |
Predicted Structure (AlphaFold2)
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