F315803

General Info

Members Datasets Scaffolds Average Seq Length
206 153 412 358

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2811994880|2812362261
Length 391
Sequence AAPGEPRARGRRYGVAMPATPAADGALADFHAVVPAGGAGTRLWPLSRAGRPKFLLDLTGTGRTMLQATVDRLAPLTGHERVLVVTGTRHAAAVAEQLPELGAAQVLAEPSPRDSMAAIGLAAAVLLERHGPDVVLGSFAADHVVTGSDLFEQTVREAVAAAREGYVVTVGIAATEPSTAFGYVRAGDDLGVDGAPSARHVLGFTEKPDAQTAAEYLATGAYSWNAGMFVVRAQVLLDHLAARMPALHDGLRTIAAAWDGPDRDARLADTWPGLTKIAIDHAIAEPVAAAGGVAVVPGSFGWDDVGDFASLAGLLAADGRATTLGDDADVLRVDADGALVVTGGRPVSVVGLPDAVVVDTPHGVLVTSRAHAQQVKAAVDGWRARGRDDLL

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
6 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
7 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
8 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
9 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
10 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
11 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
12 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
13 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
14 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
15 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
16 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
17 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
20 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
21 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
22 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
23 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
24 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
25 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
30 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
31 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
32 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
34 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
35 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
36 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
37 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
38 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
39 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
40 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
41 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
42 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
43 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
44 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
45 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
46 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
47 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
48 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
49 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
50 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
51 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
52 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
53 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
54 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
55 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
56 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
57 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
58 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
59 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
60 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
61 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
62 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
63 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
64 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
65 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
66 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
67 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
68 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
69 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
70 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
71 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
72 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
73 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
74 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
75 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
76 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
77 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
78 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
79 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
80 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
81 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
82 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
83 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
84 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
88 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
92 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
95 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
96 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
97 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
98 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
99 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
100 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
101 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
102 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
103 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
104 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
105 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
106 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
107 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
108 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
109 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
110 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
111 2643221576 Nocardioides sp. Root614 Isolate Unclassified
112 2643221590 Nocardioides sp. Root682 Isolate Unclassified
113 2643221604 Nocardioides sp. Root190 Isolate Unclassified
114 2643221613 Oerskovia sp. Root22 Isolate Unclassified
115 2643221615 Nocardioides sp. Root224 Isolate Unclassified
116 2643221617 Nocardioides sp. Root79 Isolate Unclassified
117 2643221620 Nocardioides sp. Root240 Isolate Unclassified
118 2643221624 Phycicoccus sp. Root101 Isolate Unclassified
119 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
120 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
121 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
122 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
123 2643221711 Terrabacter sp. Root85 Isolate Unclassified
124 2643221721 Oerskovia sp. Root918 Isolate Unclassified
125 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
126 2738541272 Promicromonospora sp. AC04 Isolate Unclassified
127 2738541305 Nocardioides sp. CF167 Isolate Unclassified
128 2738543027 Promicromonospora sp. CF082 Isolate Unclassified
129 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
130 2758568522 Promicromonospora thailandica SAI-039 Isolate Unclassified
131 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
132 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
133 2808606394 Promicromonospora sp. C35 Isolate Unclassified
134 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
135 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
136 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
137 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
138 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
139 2818991462 Terrabacter sp. 3264 Isolate Rhizosphere
140 2818991469 Terrabacter lapilli 3265 Isolate Rhizosphere
141 2835188231 Isoptericola variabilis JZ7 Isolate Unclassified
142 2839986021 Cellulosimicrobium cellulans JZ5 Isolate Unclassified
143 2855386786 Nocardioides ferulae EGI 63112 Isolate Unclassified
144 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
145 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
146 2887443736 Ruania rhizosphaerae LNNU 22110 Isolate Rhizosphere
147 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
148 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
149 2932431166 Cellulosimicrobium sp. 4261 Isolate Rhizosphere
150 2935890801 Oerskovia enterophila 3230 Isolate Rhizosphere
151 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root
152 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
153 8056579771 Promicromonospora iranensis UTMC 00792 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 75.24
Metatranscriptomes 2.43
Isolates 22.33

Biome Distribution

Category Percentage (%)
Aerial Root 0.49
Bulb 0
Endosphere 8.25
Nodule 0
Rhizoplane 9.22
Rhizosphere 58.25
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10006926 3300003203 Bacteria 5201
2 rootH1_10125444 3300003316 Bacteria 1596
3 Ga0006562J51391_1024474 3300003578 Bacteria 2833
4 Ga0006562J51391_1090592 3300003578 Bacteria 5220
5 Ga0070658_10097038 3300005327 Bacteria 2434
6 Ga0070668_100030341 3300005347 Bacteria 4110
7 Ga0070707_100090413 3300005468 Bacteria 2963
8 Ga0070698_100206677 3300005471 Bacteria 1898
9 Ga0070679_100044184 3300005530 Bacteria 4439
10 Ga0070665_100001640 3300005548 Bacteria 25777
11 Ga0068857_100088601 3300005577 Bacteria 2769
12 Ga0068857_100249171 3300005577 Bacteria 1628
13 Ga0068861_100010263 3300005719 Bacteria 6501
14 Ga0081455_10003072 3300005937 Bacteria 19458
15 Ga0081540_1006432 3300005983 Bacteria 8551
16 Ga0081539_10000272 3300005985 Bacteria 118649
17 Ga0075365_10094783 3300006038 Bacteria 2038
18 Ga0075368_10061289 3300006042 Bacteria 1506
19 Ga0075363_100016555 3300006048 Bacteria 3643
20 Ga0075363_100067928 3300006048 Bacteria 1932
21 Ga0075364_10077185 3300006051 Bacteria 2199
22 Ga0075364_10080778 3300006051 Bacteria 2149
23 Ga0075364_10173551 3300006051 Bacteria 1457
24 Ga0075362_10031231 3300006177 Bacteria 2304
25 Ga0075370_10005906 3300006353 Bacteria 6123
26 Ga0105243_10208484 3300009148 Bacteria 1719
27 Ga0105249_10082788 3300009553 Bacteria 2986
28 Ga0157375_10012941 3300013308 Bacteria 7412
29 Ga0206353_10573482 3300020082 Bacteria 2530
30 Ga0206353_10612581 3300020082 Bacteria 4510
31 Ga0206353_11078559 3300020082 Bacteria 2145
32 Ga0207705_10256909 3300025909 Bacteria 1333
33 Ga0207652_10057340 3300025921 Bacteria 3354
34 Ga0207709_10068501 3300025935 Bacteria 2243
35 Ga0207668_10059511 3300025972 Bacteria 2677
36 Ga0207674_10105989 3300026116 Bacteria 2789
37 Ga0207674_10141492 3300026116 Bacteria 2365
38 Ga0207675_100025421 3300026118 Bacteria 5512
39 Ga0207698_10026255 3300026142 Bacteria 4118
40 Ga0268264_10264681 3300028381 Bacteria 1603
41 Ga0265334_10027218 3300028573 Bacteria 2304
42 Ga0316181_1222241 3300030744 Bacteria 1644
43 Ga0307408_100141217 3300031548 Bacteria 1891
44 Ga0307409_100012651 3300031995 Bacteria 5388
45 Ga0307409_100017748 3300031995 Bacteria 4756
46 Ga0307409_100069321 3300031995 Bacteria 2793
47 Ga0307409_100282219 3300031995 Bacteria 1536
48 Ga0307416_100029497 3300032002 Bacteria 4100
49 Ga0307414_10264682 3300032004 Bacteria 1437
50 Ga0307415_100216953 3300032126 Bacteria 1531
51 Ga0395899_0294591 3300037312 Bacteria 1100
52 Ga0395900_0121150 3300037418 Bacteria 2684
53 Ga0395898_0085489 3300037466 Bacteria 3040
54 Ga0395898_0113064 3300037466 Bacteria 2602
55 Ga0395905_0128207 3300037471 Bacteria 2386
56 Ga0395905_0183736 3300037471 Bacteria 1963
57 Ga0395901_0002167 3300038443 Bacteria 20056
58 Ga0395901_0110801 3300038443 Bacteria 2882
59 Ga0395901_0483063 3300038443 Bacteria 1263
60 Ga0400488_48439 3300038741 Bacteria 3315
61 Ga0451833_0400322 3300041491 Bacteria 5647
62 Ga0451853_3303128 3300041512 Bacteria 1988
63 Ga0466972_0020251 3300044658 Bacteria 3324
64 Ga0466972_0188443 3300044658 Bacteria 967
65 Ga0466965_0007468 3300044683 Bacteria 5022
66 Ga0466965_0023096 3300044683 Bacteria 3001
67 Ga0466965_0056823 3300044683 Bacteria 1949
68 Ga0466966_0083364 3300044684 Bacteria 1989
69 Ga0466961_0005464 3300044693 Bacteria 8013
70 Ga0466961_0127510 3300044693 Bacteria 1596
71 Ga0466963_0026899 3300044694 Bacteria 3680
72 Ga0466963_0173307 3300044694 Bacteria 1504
73 Ga0466964_0024061 3300044706 Bacteria 2371
74 Ga0466971_0010362 3300044719 Bacteria 4072
75 Ga0466968_0071793 3300044735 Bacteria 1508
76 Ga0466970_0007256 3300044765 Bacteria 5552
77 Ga0466970_0063965 3300044765 Bacteria 1972
78 Ga0466957_0032303 3300044842 Bacteria 3133
79 Ga0466960_0000887 3300044901 Bacteria 10567
80 Ga0466960_0001689 3300044901 Bacteria 8093
81 Ga0466960_0100287 3300044901 Bacteria 1490
82 Ga0466960_0102647 3300044901 Bacteria 1475
83 Ga0466958_0122866 3300045836 Bacteria 1626
84 Ga0466967_0096328 3300045976 Bacteria 2699
85 Ga0466967_0121959 3300045976 Bacteria 2410
86 Ga0466967_0143454 3300045976 Bacteria 2226
87 Ga0466967_0155656 3300045976 Bacteria 2140
88 Ga0466967_0176647 3300045976 Bacteria 2012
89 Ga0495627_012531 3300046453 Bacteria 3005
90 Ga0495658_0260712 3300046683 Bacteria 1091
91 Ga0496100_0011478 3300048903 Bacteria 5044
92 Ga0496100_0098484 3300048903 Bacteria 2010
93 Ga0496101_0017737 3300048904 Bacteria 4829
94 Ga0496102_0002996 3300048905 Bacteria 14305
95 Ga0496102_0024786 3300048905 Bacteria 5336
96 Ga0496102_0057943 3300048905 Bacteria 3539
97 Ga0496103_0053189 3300048906 Bacteria 2509
98 Ga0496104_0170707 3300048907 Bacteria 2086
99 Ga0496105_0020214 3300048908 Bacteria 5378
100 Ga0496105_0066129 3300048908 Bacteria 2984
101 Ga0496105_0198861 3300048908 Bacteria 1636
102 Ga0496108_0264433 3300048911 Bacteria 1497
103 Ga0496109_0309266 3300048912 Bacteria 1491
104 Ga0496114_0005951 3300048917 Bacteria 9589
105 Ga0496114_0009170 3300048917 Bacteria 7844
106 Ga0496114_0033569 3300048917 Bacteria 4229
107 Ga0496114_0035547 3300048917 Bacteria 4114
108 Ga0496114_0037885 3300048917 Bacteria 3989
109 Ga0496114_0166004 3300048917 Bacteria 1922
110 Ga0496117_0020787 3300048920 Bacteria 5340
111 Ga0496118_0067446 3300048921 Bacteria 2605
112 Ga0496119_0023473 3300048922 Bacteria 4371
113 Ga0496120_0143079 3300048923 Bacteria 1212
114 Ga0496122_0001262 3300048925 Bacteria 42353
115 Ga0496125_0000015 3300048928 Bacteria 516648
116 Ga0496125_0014390 3300048928 Bacteria 7708
117 Ga0496126_0004118 3300048929 Bacteria 17594
118 Ga0501031_0001511 3300049568 Bacteria 14498
119 Ga0501032_0003689 3300049569 Bacteria 11629
120 Ga0501033_0009802 3300049570 Bacteria 7355
121 Ga0501034_0001740 3300049571 Bacteria 27957
122 Ga0501034_0121168 3300049571 Bacteria 2602
123 Ga0501036_0001023 3300049572 Bacteria 21122
124 Ga0501036_0002895 3300049572 Bacteria 13618
125 Ga0501037_0000979 3300049573 Bacteria 21235
126 Ga0501038_0002983 3300049574 Bacteria 15776
127 Ga0501038_0007620 3300049574 Bacteria 9982
128 Ga0501039_0140040 3300049575 Bacteria 1900
129 Ga0501043_0006103 3300049579 Bacteria 9680
130 Ga0501046_0001247 3300049580 Bacteria 24612
131 Ga0501046_0017655 3300049580 Bacteria 5951
132 Ga0501047_0023458 3300049581 Bacteria 5922
133 Ga0501047_0161607 3300049581 Bacteria 2111
134 Ga0501048_0003109 3300049582 Bacteria 12670
135 Ga0501067_0038017 3300049583 Bacteria 2673
136 Ga0501069_0020268 3300049585 Bacteria 3602
137 Ga0501070_0036992 3300049586 Bacteria 4075
138 Ga0501074_0027344 3300049590 Bacteria 4136
139 Ga0501075_0112899 3300049591 Bacteria 2066
140 Ga0501076_0168869 3300049592 Bacteria 1783
141 Ga0501079_0044383 3300049741 Bacteria 3431
142 Ga0501079_0157908 3300049741 Bacteria 1768
143 Ga0501079_0295471 3300049741 Bacteria 1267
144 Ga0501080_0061810 3300049742 Bacteria 3486
145 Ga0501080_0202091 3300049742 Bacteria 1824
146 Ga0501035_0003346 3300049822 Bacteria 15366
147 Ga0501035_0009988 3300049822 Bacteria 8810
148 Ga0501044_0002750 3300049823 Bacteria 20015
149 Ga0501044_0005527 3300049823 Bacteria 14025
150 Ga0501044_0018286 3300049823 Bacteria 7511
151 nmdc:mga03683_43803_c1 3300050489 Bacteria 1848
152 nmdc:mga03n38_41809_c1 3300050490 Bacteria 2000
153 nmdc:mga00v17_104013_c1 3300050491 Bacteria 1795
154 nmdc:mga00v17_168150_c1 3300050491 Bacteria 1413
155 nmdc:mga07m45_15596_c1 3300050496 Bacteria 4058
156 Ga0500644_0000177 3300053088 Bacteria 40984
157 Ga0500556_0002039 3300053104 Bacteria 7019
158 Ga0500593_050433 3300053117 Bacteria 1848
159 Ga0466962_0047182 3300061719 Bacteria 2058
160 Ga0466962_0053151 3300061719 Bacteria 1936
161 2812362261 2811994880 Bacteria 4147780
162 2643852785 2643221567 Bacteria 4163945
163 2643892554 2643221576 Bacteria 5214352
164 2643961606 2643221590 Bacteria 5214697
165 2644032474 2643221604 Bacteria 5014917
166 2644082808 2643221613 Bacteria 4622396
167 2644091861 2643221615 Bacteria 5487866
168 2644102637 2643221617 Bacteria 5139111
169 2644118299 2643221620 Bacteria 5134593
170 2644135295 2643221624 Bacteria 4384879
171 2644321664 2643221657 Bacteria 5490246
172 2644505140 2643221690 Bacteria 4654705
173 2644527464 2643221694 Bacteria 4392972
174 2644536523 2643221697 Bacteria 3575694
175 2644610951 2643221711 Bacteria 4865335
176 2644665763 2643221721 Bacteria 4486924
177 2644667468 2643221722 Bacteria 4247614
178 2738693152 2738541272 Bacteria 6848551
179 2738870657 2738541305 Bacteria 4910150
180 2739323273 2738543027 Bacteria 6409078
181 2739607882 2739367654 Bacteria 6049412
182 2739607902 2739367654 Bacteria 6049412
183 2760304109 2758568522 Bacteria 5953541
184 2760621936 2758568621 Bacteria 5967089
185 2774396545 2773857762 Bacteria 5971770
186 2809026778 2808606394 Bacteria 6248540
187 2809198211 2808606439 Bacteria 5952208
188 2812334057 2811994874 Bacteria 5367947
189 2812353118 2811994878 Bacteria 5992952
190 2812375670 2811994882 Bacteria 4688362
191 2819666847 2818991458 Bacteria 4794049
192 2819690271 2818991462 Bacteria 4320267
193 2819728488 2818991469 Bacteria 4644110
194 2835191084 2835188231 Bacteria 3476928
195 2839989385 2839986021 Bacteria 3685650
196 2855389172 2855386786 Bacteria 4752232
197 2857485622 2857481737 Bacteria 4761446
198 2884994453 2884994152 Bacteria 4492978
199 2887447203 2887443736 Bacteria 4426037
200 2891969255 2891968417 Bacteria 5821697
201 2919447741 2919446982 Bacteria 3994487
202 2932433873 2932431166 Bacteria 4215299
203 2935892564 2935890801 Bacteria 4593001
204 2984592419 2984592036 Bacteria 3670284
205 8003832068 8003830390 Bacteria 6541657
206 8056580841 8056579771 Bacteria 5840325
207 JGI25406J46586_10006926
208 rootH1_10125444
209 Ga0006562J51391_1024474
210 Ga0006562J51391_1090592
211 Ga0070658_10097038
212 Ga0070668_100030341
213 Ga0070707_100090413
214 Ga0070698_100206677
215 Ga0070679_100044184
216 Ga0070665_100001640
217 Ga0068857_100088601
218 Ga0068857_100249171
219 Ga0068861_100010263
220 Ga0081455_10003072
221 Ga0081540_1006432
222 Ga0081539_10000272
223 Ga0075365_10094783
224 Ga0075368_10061289
225 Ga0075363_100016555
226 Ga0075363_100067928
227 Ga0075364_10077185
228 Ga0075364_10080778
229 Ga0075364_10173551
230 Ga0075362_10031231
231 Ga0075370_10005906
232 Ga0105243_10208484
233 Ga0105249_10082788
234 Ga0157375_10012941
235 Ga0206353_10573482
236 Ga0206353_10612581
237 Ga0206353_11078559
238 Ga0207705_10256909
239 Ga0207652_10057340
240 Ga0207709_10068501
241 Ga0207668_10059511
242 Ga0207674_10105989
243 Ga0207674_10141492
244 Ga0207675_100025421
245 Ga0207698_10026255
246 Ga0268264_10264681
247 Ga0265334_10027218
248 Ga0316181_1222241
249 Ga0307408_100141217
250 Ga0307409_100012651
251 Ga0307409_100017748
252 Ga0307409_100069321
253 Ga0307409_100282219
254 Ga0307416_100029497
255 Ga0307414_10264682
256 Ga0307415_100216953
257 Ga0395899_0294591
258 Ga0395900_0121150
259 Ga0395898_0085489
260 Ga0395898_0113064
261 Ga0395905_0128207
262 Ga0395905_0183736
263 Ga0395901_0002167
264 Ga0395901_0110801
265 Ga0395901_0483063
266 Ga0400488_48439
267 Ga0451833_0400322
268 Ga0451853_3303128
269 Ga0466972_0020251
270 Ga0466972_0188443
271 Ga0466965_0007468
272 Ga0466965_0023096
273 Ga0466965_0056823
274 Ga0466966_0083364
275 Ga0466961_0005464
276 Ga0466961_0127510
277 Ga0466963_0026899
278 Ga0466963_0173307
279 Ga0466964_0024061
280 Ga0466971_0010362
281 Ga0466968_0071793
282 Ga0466970_0007256
283 Ga0466970_0063965
284 Ga0466957_0032303
285 Ga0466960_0000887
286 Ga0466960_0001689
287 Ga0466960_0100287
288 Ga0466960_0102647
289 Ga0466958_0122866
290 Ga0466967_0096328
291 Ga0466967_0121959
292 Ga0466967_0143454
293 Ga0466967_0155656
294 Ga0466967_0176647
295 Ga0495627_012531
296 Ga0495658_0260712
297 Ga0496100_0011478
298 Ga0496100_0098484
299 Ga0496101_0017737
300 Ga0496102_0002996
301 Ga0496102_0024786
302 Ga0496102_0057943
303 Ga0496103_0053189
304 Ga0496104_0170707
305 Ga0496105_0020214
306 Ga0496105_0066129
307 Ga0496105_0198861
308 Ga0496108_0264433
309 Ga0496109_0309266
310 Ga0496114_0005951
311 Ga0496114_0009170
312 Ga0496114_0033569
313 Ga0496114_0035547
314 Ga0496114_0037885
315 Ga0496114_0166004
316 Ga0496117_0020787
317 Ga0496118_0067446
318 Ga0496119_0023473
319 Ga0496120_0143079
320 Ga0496122_0001262
321 Ga0496125_0000015
322 Ga0496125_0014390
323 Ga0496126_0004118
324 Ga0501031_0001511
325 Ga0501032_0003689
326 Ga0501033_0009802
327 Ga0501034_0001740
328 Ga0501034_0121168
329 Ga0501036_0001023
330 Ga0501036_0002895
331 Ga0501037_0000979
332 Ga0501038_0002983
333 Ga0501038_0007620
334 Ga0501039_0140040
335 Ga0501043_0006103
336 Ga0501046_0001247
337 Ga0501046_0017655
338 Ga0501047_0023458
339 Ga0501047_0161607
340 Ga0501048_0003109
341 Ga0501067_0038017
342 Ga0501069_0020268
343 Ga0501070_0036992
344 Ga0501074_0027344
345 Ga0501075_0112899
346 Ga0501076_0168869
347 Ga0501079_0044383
348 Ga0501079_0157908
349 Ga0501079_0295471
350 Ga0501080_0061810
351 Ga0501080_0202091
352 Ga0501035_0003346
353 Ga0501035_0009988
354 Ga0501044_0002750
355 Ga0501044_0005527
356 Ga0501044_0018286
357 nmdc:mga03683_43803_c1
358 nmdc:mga03n38_41809_c1
359 nmdc:mga00v17_104013_c1
360 nmdc:mga00v17_168150_c1
361 nmdc:mga07m45_15596_c1
362 Ga0500644_0000177
363 Ga0500556_0002039
364 Ga0500593_050433
365 Ga0466962_0047182
366 Ga0466962_0053151
367 2812362261
368 2643852785
369 2643892554
370 2643961606
371 2644032474
372 2644082808
373 2644091861
374 2644102637
375 2644118299
376 2644135295
377 2644321664
378 2644505140
379 2644527464
380 2644536523
381 2644610951
382 2644665763
383 2644667468
384 2738693152
385 2738870657
386 2739323273
387 2739607882
388 2739607902
389 2760304109
390 2760621936
391 2774396545
392 2809026778
393 2809198211
394 2812334057
395 2812353118
396 2812375670
397 2819666847
398 2819690271
399 2819728488
400 2835191084
401 2839989385
402 2855389172
403 2857485622
404 2884994453
405 2887447203
406 2891969255
407 2919447741
408 2932433873
409 2935892564
410 2984592419
411 8003832068
412 8056580841

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22640

ManC_GMP_beta-helix

MannoseP isomerase/GMP-like beta-helix domain

328

381

0.95

PF00483

NTP_transferase

Nucleotidyl transferase

31

319

0.89

PF12804

NTP_transf_3

MobA-like NTP transferase domain

32

210

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
2cu2-assembly1.cif.gz_A-2 crystal structure of mannose-1-phosphate geranyltransferase from thermus thermophilus hb8 0.8321 20 340
2x5s-assembly1.cif.gz_B crystal structure of t. maritima gdp-mannose pyrophosphorylase in apo state. 0.8017 20 339
2cu2-assembly1.cif.gz_A-2 crystal structure of mannose-1-phosphate geranyltransferase from thermus thermophilus hb8 0.797 20 340
2x5s-assembly1.cif.gz_B crystal structure of t. maritima gdp-mannose pyrophosphorylase in apo state. 0.7704 20 339
2qh5-assembly1.cif.gz_A crystal structure of mannose-6-phosphate isomerase from helicobacter pylori 0.753 20 261
ID Description Score Start End Superfamily
af_P24174_4_358_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8343 20 341 3.90.550.10
2cu2A00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8321 20 340 3.90.550.10
2x5sB00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8017 20 339 3.90.550.10
2cu2A00 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.797 20 340 3.90.550.10
af_P24174_4_358_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.7739 20 341 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A7G3D925-F1-model_v4 deleted 0.9628 141 266
AF-A0A6L6DEK5-F1-model_v4 NTP transferase domain-containing protein 0.9566 20 121 GO:0004475
GO:0009298
AF-A0A2N6P2B1-F1-model_v4 Mannose-1-phosphate guanylyltransferase 0.9556 12 348 GO:0004475
GO:0009298
AF-A0A0L6W754-F1-model_v4 Mannose-1-phosphate guanylyltransferase 0.9554 43 343 GO:0004475
GO:0009298
AF-A0A5J4Q9W6-F1-model_v4 Mannose-1-phosphate guanylyltransferase RfbM (EC 2.7.7.13) 0.9549 21 116 GO:0004475
GO:0009298

Map