F315378

General Info

Members Datasets Scaffolds Average Seq Length
206 124 412 392

Family's Representative Sequence

Representative Sequence 3300037312|Ga0395899_0019569|Ga0395899_0019569_2979_4376
Length 451
Sequence MFPRFDGVNGIEAAGSAINLTAGGEGLLAARPSPRDRRGYKRPPTLSRIRMTAAEPRPARKLIRRQADLAINGATPAFAEPLHVGRPNVADRELYLEKIAGMLDSGWLTNDGPLVREFEARLAEHVGARHVVATCNATIALEIAVRALGLSGEVIVPSYTFIATAHAVAWQGITPVFADIDPETHCLDPASVERLITPRTTGVIGVHLWGRTAPVESLEAIARERGLKLIFDAAHAFGVTRGGKLVGGFGACEVFSFHATKFLNSLEGGAVATDDDDLAQAVRLMRNFGFAGYDNVIHPGTNGKMVEACAAMGLVNLERVQDLVEVNLRNHRAYARALADVPGLRLLGFDEAERNNFQYVVVERQPDCAASRDEIVAALTAEGVLARKYFWPGCHRMLPYREQCPEADAHLPNTNAVAERVVVLPTGVSVSESDAEVIGSVLGVLAHQGVR

Samples

Sample ID Description Type Environment
1 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
2 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
3 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
4 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
5 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
21 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
24 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
25 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
34 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
35 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
36 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
37 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
38 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
41 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
42 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
43 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
44 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
45 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
46 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
48 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
70 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
71 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
72 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
73 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
74 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
75 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
76 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
77 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
78 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
79 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
80 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
81 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
82 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
83 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
84 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
85 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
86 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
87 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
88 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
89 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
90 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
91 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
92 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
93 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
94 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
95 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
97 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
98 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
99 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
100 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
103 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
104 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
107 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
108 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
109 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
110 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
111 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
112 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
113 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
114 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
115 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
117 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
120 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
121 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
122 2643221567 Phycicoccus sp. Root563 Isolate Unclassified
123 2739367700 Dyella sp. YR388 Isolate Unclassified
124 2941471342 Luteibacter sp. 621 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 98.54
Metatranscriptomes 0
Isolates 1.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.31
Nodule 0
Rhizoplane 0.49
Rhizosphere 88.35
Stem 0
Stem Tuber 0
Unclassified 3.4

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0395899_0019569 3300037312 Bacteria 5140
2 JGI24735J21928_10000519 3300002067 Bacteria 13643
3 Ga0055525_1000093 3300003759 Bacteria 138423
4 Ga0055527_1000045 3300003760 Bacteria 111375
5 Ga0055542_1000303 3300003762 Bacteria 54819
6 Ga0070658_10010549 3300005327 Bacteria 7405
7 Ga0070680_100027534 3300005336 Bacteria 4551
8 Ga0070680_100308966 3300005336 Bacteria 1341
9 Ga0070682_100000560 3300005337 Bacteria 22916
10 Ga0070691_10004236 3300005341 Bacteria 6523
11 Ga0070661_100000626 3300005344 Bacteria 26272
12 Ga0070667_100013607 3300005367 Bacteria 6722
13 Ga0070713_100017833 3300005436 Bacteria 5383
14 Ga0070663_100024796 3300005455 Bacteria 4041
15 Ga0070681_10001218 3300005458 Bacteria 22400
16 Ga0070681_10004740 3300005458 Bacteria 13024
17 Ga0070681_10020292 3300005458 Bacteria 6661
18 Ga0070681_10074529 3300005458 Bacteria 3355
19 Ga0070706_100000001 3300005467 Bacteria 342302
20 Ga0070698_100001677 3300005471 Bacteria 24715
21 Ga0070698_100008340 3300005471 Bacteria 11199
22 Ga0070698_100046798 3300005471 Unclassified 4423
23 Ga0070699_100000407 3300005518 Bacteria 41620
24 Ga0070699_100032076 3300005518 Bacteria 4537
25 Ga0070679_100002371 3300005530 Bacteria 17069
26 Ga0070679_100007186 3300005530 Bacteria 10399
27 Ga0070679_100008490 3300005530 Bacteria 9675
28 Ga0068853_100004714 3300005539 Bacteria 10582
29 Ga0070696_100043165 3300005546 Bacteria 3119
30 Ga0070665_100005192 3300005548 Bacteria 13468
31 Ga0070665_100027481 3300005548 Bacteria 5731
32 Ga0068855_100003608 3300005563 Bacteria 18906
33 Ga0068856_100006629 3300005614 Bacteria 11345
34 Ga0068856_100130378 3300005614 Bacteria 2519
35 Ga0068852_100017223 3300005616 Bacteria 5664
36 Ga0068859_100005149 3300005617 Bacteria 13274
37 Ga0068859_100306335 3300005617 Bacteria 1682
38 Ga0097620_100005149 3300006931 Bacteria 13274
39 Ga0097620_100306328 3300006931 Bacteria 1682
40 Ga0105240_10002136 3300009093 Bacteria 32280
41 Ga0105240_10004974 3300009093 Bacteria 19964
42 Ga0105240_10047309 3300009093 Bacteria 5444
43 Ga0114129_10041068 3300009147 Bacteria 6520
44 Ga0105237_10001365 3300009545 Bacteria 32280
45 Ga0105237_10015146 3300009545 Bacteria 8035
46 Ga0105237_10024091 3300009545 Bacteria 6227
47 Ga0105237_10317404 3300009545 Bacteria 1561
48 Ga0105238_10001948 3300009551 Bacteria 20773
49 Ga0105238_10034951 3300009551 Bacteria 5112
50 Ga0105239_10001668 3300010375 Bacteria 29268
51 Ga0105239_10001689 3300010375 Bacteria 29111
52 Ga0105239_10002677 3300010375 Bacteria 22432
53 Ga0105239_10005276 3300010375 Bacteria 15191
54 Ga0157371_10023489 3300013102 Unclassified 4509
55 Ga0157370_10003229 3300013104 Bacteria 19252
56 Ga0157370_10016089 3300013104 Bacteria 7582
57 Ga0157370_10030302 3300013104 Bacteria 5302
58 Ga0157370_10045362 3300013104 Bacteria 4217
59 Ga0157370_10203189 3300013104 Bacteria 1838
60 Ga0157369_10006048 3300013105 Bacteria 14050
61 Ga0157369_10006745 3300013105 Bacteria 13248
62 Ga0157369_10114405 3300013105 Bacteria 2865
63 Ga0157369_10164057 3300013105 Bacteria 2344
64 Ga0163162_10006855 3300013306 Bacteria 11054
65 Ga0163162_10012319 3300013306 Bacteria 8350
66 Ga0157372_10000403 3300013307 Bacteria 47787
67 Ga0157372_10032312 3300013307 Bacteria 5738
68 Ga0182008_10001304 3300014497 Bacteria 17033
69 Ga0182008_10002160 3300014497 Bacteria 12525
70 Ga0182008_10012469 3300014497 Bacteria 4485
71 Ga0157379_10316032 3300014968 Bacteria 1425
72 Ga0157376_10335083 3300014969 Bacteria 1443
73 Ga0182007_10001447 3300015262 Bacteria 12747
74 Ga0182007_10005260 3300015262 Bacteria 5712
75 Ga0183369_1013 3300015685 Bacteria 222738
76 Ga0213872_10011669 3300021361 Bacteria 4153
77 Ga0209672_100005 3300025228 Bacteria 1069303
78 Ga0209563_100045 3300025230 Bacteria 377102
79 Ga0209437_102628 3300025233 Bacteria 3432
80 Ga0209258_100006 3300025242 Bacteria 1069303
81 Ga0209026_1003063 3300025250 Bacteria 5730
82 Ga0209148_1000012 3300025254 Bacteria 1069303
83 Ga0209455_1000008 3300025272 Bacteria 1069303
84 Ga0209051_1028620 3300025303 Bacteria 2197
85 Ga0207647_10005706 3300025904 Bacteria 9085
86 Ga0207647_10118789 3300025904 Bacteria 1560
87 Ga0207684_10000030 3300025910 Bacteria 300037
88 Ga0207707_10000106 3300025912 Bacteria 83040
89 Ga0207707_10000334 3300025912 Bacteria 49704
90 Ga0207707_10002166 3300025912 Bacteria 17775
91 Ga0207707_10003019 3300025912 Bacteria 14962
92 Ga0207707_10008923 3300025912 Bacteria 8708
93 Ga0207707_10058145 3300025912 Bacteria 3365
94 Ga0207695_10001632 3300025913 Bacteria 36257
95 Ga0207695_10007025 3300025913 Bacteria 14446
96 Ga0207695_10097475 3300025913 Unclassified 2941
97 Ga0207671_10000764 3300025914 Bacteria 40877
98 Ga0207671_10038787 3300025914 Bacteria 3530
99 Ga0207660_10272626 3300025917 Bacteria 1341
100 Ga0207649_10000458 3300025920 Bacteria 29337
101 Ga0207652_10000963 3300025921 Bacteria 26889
102 Ga0207652_10005169 3300025921 Bacteria 10593
103 Ga0207694_10000394 3300025924 Bacteria 40768
104 Ga0207694_10117789 3300025924 Unclassified 2118
105 Ga0207700_10047815 3300025928 Bacteria 3173
106 Ga0207690_10004427 3300025932 Bacteria 8286
107 Ga0207667_10002971 3300025949 Bacteria 21069
108 Ga0207667_10006304 3300025949 Bacteria 14387
109 Ga0207667_10010447 3300025949 Bacteria 10850
110 Ga0207667_10174994 3300025949 Bacteria 2205
111 Ga0207658_10206656 3300025986 Bacteria 1643
112 Ga0207639_10000304 3300026041 Bacteria 34871
113 Ga0207678_10027651 3300026067 Bacteria 4950
114 Ga0207702_10008313 3300026078 Bacteria 8764
115 Ga0207702_10031288 3300026078 Bacteria 4435
116 Ga0207702_10065615 3300026078 Bacteria 3110
117 Ga0207698_10075181 3300026142 Bacteria 2698
118 Ga0268266_10001074 3300028379 Bacteria 34257
119 Ga0268266_10137421 3300028379 Bacteria 2190
120 Ga0265338_10013269 3300028800 Bacteria 9319
121 Ga0265332_10001904 3300031238 Bacteria 11058
122 Ga0265332_10013925 3300031238 Bacteria 3560
123 Ga0265328_10063346 3300031239 Bacteria 1358
124 Ga0265339_10006907 3300031249 Bacteria 7395
125 Ga0265316_10001746 3300031344 Bacteria 23067
126 Ga0265314_10000884 3300031711 Bacteria 35728
127 Ga0265342_10000028 3300031712 Bacteria 156813
128 Ga0307416_100046712 3300032002 Bacteria 3420
129 Ga0307414_10140820 3300032004 Bacteria 1888
130 Ga0307510_10032565 3300033180 Bacteria 5871
131 Ga0373937_0106070 3300036401 Bacteria 2612
132 Ga0395899_0008279 3300037312 Bacteria 8007
133 Ga0395900_0000024 3300037418 Bacteria 323480
134 Ga0395900_0000060 3300037418 Bacteria 205509
135 Ga0395900_0024778 3300037418 Bacteria 6142
136 Ga0395900_0039469 3300037418 Bacteria 4864
137 Ga0395900_0046920 3300037418 Bacteria 4448
138 Ga0395898_0000961 3300037466 Bacteria 45890
139 Ga0395898_0001802 3300037466 Bacteria 27727
140 Ga0395898_0001948 3300037466 Bacteria 26115
141 Ga0395898_0019949 3300037466 Bacteria 6816
142 Ga0395898_0075441 3300037466 Bacteria 3257
143 Ga0395905_0000047 3300037471 Bacteria 237582
144 Ga0395905_0029781 3300037471 Bacteria 5144
145 Ga0395905_0045821 3300037471 Bacteria 4102
146 Ga0395901_0000863 3300038443 Bacteria 33387
147 Ga0395901_0001108 3300038443 Bacteria 28639
148 Ga0395901_0006149 3300038443 Bacteria 12163
149 Ga0395901_0037142 3300038443 Bacteria 5038
150 Ga0400490_02093 3300038726 Bacteria 19811
151 Ga0400488_04879 3300038741 Bacteria 1737
152 Ga0436361_0477005 3300039447 Bacteria 40055
153 Ga0495650_0000203 3300046471 Bacteria 129364
154 Ga0495585_0002690 3300046492 Bacteria 12463
155 Ga0495656_0024669 3300046615 Bacteria 2377
156 Ga0495625_0041616 3300046660 Bacteria 3343
157 Ga0495684_0177183 3300047471 Bacteria 1582
158 Ga0496112_0002591 3300048915 Bacteria 14609
159 Ga0496118_0000912 3300048921 Bacteria 46183
160 Ga0496126_0039478 3300048929 Bacteria 4379
161 Ga0501031_0003550 3300049568 Bacteria 10011
162 Ga0501032_0003900 3300049569 Bacteria 11315
163 Ga0501033_0002623 3300049570 Bacteria 15139
164 Ga0501033_0008746 3300049570 Bacteria 7829
165 Ga0501033_0014540 3300049570 Bacteria 5975
166 Ga0501034_0015934 3300049571 Bacteria 7714
167 Ga0501034_0046749 3300049571 Bacteria 4373
168 Ga0501036_0003199 3300049572 Bacteria 13077
169 Ga0501037_0006765 3300049573 Bacteria 8382
170 Ga0501038_0000359 3300049574 Bacteria 39223
171 Ga0501039_0004903 3300049575 Bacteria 10139
172 Ga0501043_0002903 3300049579 Bacteria 14312
173 Ga0501046_0023960 3300049580 Bacteria 5012
174 Ga0501047_0018887 3300049581 Bacteria 6611
175 Ga0501047_0023496 3300049581 Bacteria 5917
176 Ga0501047_0077592 3300049581 Bacteria 3195
177 Ga0501067_0023849 3300049583 Unclassified 3392
178 Ga0501068_0004547 3300049584 Bacteria 7545
179 Ga0501069_0000818 3300049585 Bacteria 14683
180 Ga0501069_0006158 3300049585 Bacteria 6265
181 Ga0501070_0006485 3300049586 Bacteria 9959
182 Ga0501070_0035058 3300049586 Bacteria 4194
183 Ga0501073_0000276 3300049589 Bacteria 33990
184 Ga0501073_0005190 3300049589 Bacteria 9762
185 Ga0501074_0000182 3300049590 Bacteria 33963
186 Ga0501074_0016696 3300049590 Bacteria 5327
187 Ga0501079_0008789 3300049741 Bacteria 7654
188 Ga0501080_0002802 3300049742 Bacteria 15318
189 Ga0501080_0068611 3300049742 Bacteria 3298
190 Ga0501080_0070787 3300049742 Unclassified 3244
191 Ga0501080_0075660 3300049742 Bacteria 3131
192 Ga0501080_0281522 3300049742 Bacteria 1512
193 Ga0501083_0032883 3300049744 Unclassified 3554
194 Ga0501035_0006968 3300049822 Bacteria 10557
195 Ga0501035_0021964 3300049822 Bacteria 5864
196 Ga0501044_0012470 3300049823 Bacteria 9205
197 Ga0501044_0016460 3300049823 Bacteria 7936
198 Ga0501044_0213624 3300049823 Bacteria 1882
199 Ga0501045_0016466 3300049824 Bacteria 5252
200 nmdc:mga05p37_47679_c1 3300050507 Bacteria 5268
201 Ga0500555_000129 3300053103 Bacteria 35970
202 Ga0500616_0001332 3300053153 Bacteria 24254
203 Ga0500645_000701 3300053730 Bacteria 20785
204 2643852951 2643221567 Bacteria 4163945
205 2739730046 2739367700 Bacteria 4747630
206 2941472533 2941471342 Bacteria 5018624
207 Ga0395899_0019569
208 JGI24735J21928_10000519
209 Ga0055525_1000093
210 Ga0055527_1000045
211 Ga0055542_1000303
212 Ga0070658_10010549
213 Ga0070680_100027534
214 Ga0070680_100308966
215 Ga0070682_100000560
216 Ga0070691_10004236
217 Ga0070661_100000626
218 Ga0070667_100013607
219 Ga0070713_100017833
220 Ga0070663_100024796
221 Ga0070681_10001218
222 Ga0070681_10004740
223 Ga0070681_10020292
224 Ga0070681_10074529
225 Ga0070706_100000001
226 Ga0070698_100001677
227 Ga0070698_100008340
228 Ga0070698_100046798
229 Ga0070699_100000407
230 Ga0070699_100032076
231 Ga0070679_100002371
232 Ga0070679_100007186
233 Ga0070679_100008490
234 Ga0068853_100004714
235 Ga0070696_100043165
236 Ga0070665_100005192
237 Ga0070665_100027481
238 Ga0068855_100003608
239 Ga0068856_100006629
240 Ga0068856_100130378
241 Ga0068852_100017223
242 Ga0068859_100005149
243 Ga0068859_100306335
244 Ga0097620_100005149
245 Ga0097620_100306328
246 Ga0105240_10002136
247 Ga0105240_10004974
248 Ga0105240_10047309
249 Ga0114129_10041068
250 Ga0105237_10001365
251 Ga0105237_10015146
252 Ga0105237_10024091
253 Ga0105237_10317404
254 Ga0105238_10001948
255 Ga0105238_10034951
256 Ga0105239_10001668
257 Ga0105239_10001689
258 Ga0105239_10002677
259 Ga0105239_10005276
260 Ga0157371_10023489
261 Ga0157370_10003229
262 Ga0157370_10016089
263 Ga0157370_10030302
264 Ga0157370_10045362
265 Ga0157370_10203189
266 Ga0157369_10006048
267 Ga0157369_10006745
268 Ga0157369_10114405
269 Ga0157369_10164057
270 Ga0163162_10006855
271 Ga0163162_10012319
272 Ga0157372_10000403
273 Ga0157372_10032312
274 Ga0182008_10001304
275 Ga0182008_10002160
276 Ga0182008_10012469
277 Ga0157379_10316032
278 Ga0157376_10335083
279 Ga0182007_10001447
280 Ga0182007_10005260
281 Ga0183369_1013
282 Ga0213872_10011669
283 Ga0209672_100005
284 Ga0209563_100045
285 Ga0209437_102628
286 Ga0209258_100006
287 Ga0209026_1003063
288 Ga0209148_1000012
289 Ga0209455_1000008
290 Ga0209051_1028620
291 Ga0207647_10005706
292 Ga0207647_10118789
293 Ga0207684_10000030
294 Ga0207707_10000106
295 Ga0207707_10000334
296 Ga0207707_10002166
297 Ga0207707_10003019
298 Ga0207707_10008923
299 Ga0207707_10058145
300 Ga0207695_10001632
301 Ga0207695_10007025
302 Ga0207695_10097475
303 Ga0207671_10000764
304 Ga0207671_10038787
305 Ga0207660_10272626
306 Ga0207649_10000458
307 Ga0207652_10000963
308 Ga0207652_10005169
309 Ga0207694_10000394
310 Ga0207694_10117789
311 Ga0207700_10047815
312 Ga0207690_10004427
313 Ga0207667_10002971
314 Ga0207667_10006304
315 Ga0207667_10010447
316 Ga0207667_10174994
317 Ga0207658_10206656
318 Ga0207639_10000304
319 Ga0207678_10027651
320 Ga0207702_10008313
321 Ga0207702_10031288
322 Ga0207702_10065615
323 Ga0207698_10075181
324 Ga0268266_10001074
325 Ga0268266_10137421
326 Ga0265338_10013269
327 Ga0265332_10001904
328 Ga0265332_10013925
329 Ga0265328_10063346
330 Ga0265339_10006907
331 Ga0265316_10001746
332 Ga0265314_10000884
333 Ga0265342_10000028
334 Ga0307416_100046712
335 Ga0307414_10140820
336 Ga0307510_10032565
337 Ga0373937_0106070
338 Ga0395899_0008279
339 Ga0395900_0000024
340 Ga0395900_0000060
341 Ga0395900_0024778
342 Ga0395900_0039469
343 Ga0395900_0046920
344 Ga0395898_0000961
345 Ga0395898_0001802
346 Ga0395898_0001948
347 Ga0395898_0019949
348 Ga0395898_0075441
349 Ga0395905_0000047
350 Ga0395905_0029781
351 Ga0395905_0045821
352 Ga0395901_0000863
353 Ga0395901_0001108
354 Ga0395901_0006149
355 Ga0395901_0037142
356 Ga0400490_02093
357 Ga0400488_04879
358 Ga0436361_0477005
359 Ga0495650_0000203
360 Ga0495585_0002690
361 Ga0495656_0024669
362 Ga0495625_0041616
363 Ga0495684_0177183
364 Ga0496112_0002591
365 Ga0496118_0000912
366 Ga0496126_0039478
367 Ga0501031_0003550
368 Ga0501032_0003900
369 Ga0501033_0002623
370 Ga0501033_0008746
371 Ga0501033_0014540
372 Ga0501034_0015934
373 Ga0501034_0046749
374 Ga0501036_0003199
375 Ga0501037_0006765
376 Ga0501038_0000359
377 Ga0501039_0004903
378 Ga0501043_0002903
379 Ga0501046_0023960
380 Ga0501047_0018887
381 Ga0501047_0023496
382 Ga0501047_0077592
383 Ga0501067_0023849
384 Ga0501068_0004547
385 Ga0501069_0000818
386 Ga0501069_0006158
387 Ga0501070_0006485
388 Ga0501070_0035058
389 Ga0501073_0000276
390 Ga0501073_0005190
391 Ga0501074_0000182
392 Ga0501074_0016696
393 Ga0501079_0008789
394 Ga0501080_0002802
395 Ga0501080_0068611
396 Ga0501080_0070787
397 Ga0501080_0075660
398 Ga0501080_0281522
399 Ga0501083_0032883
400 Ga0501035_0006968
401 Ga0501035_0021964
402 Ga0501044_0012470
403 Ga0501044_0016460
404 Ga0501044_0213624
405 Ga0501045_0016466
406 nmdc:mga05p37_47679_c1
407 Ga0500555_000129
408 Ga0500616_0001332
409 Ga0500645_000701
410 2643852951
411 2739730046
412 2941472533

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01041

DegT_DnrJ_EryC1

DegT/DnrJ/EryC1/StrS aminotransferase family

90

442

0.94

PF00155

Aminotran_1_2

Aminotransferase class I and II

88

427

0.83

Structural Annotation

Top 5 Hits

ID Description Score Start End
2po3-assembly1.cif.gz_B crystal structure analysis of desi in the presence of its tdp-sugar product 0.9304 6 367
3dr4-assembly1.cif.gz_A gdp-perosamine synthase k186a mutant from caulobacter crescentus with bound sugar ligand 0.9265 24 361
3frk-assembly1.cif.gz_B x-ray structure of qdtb from t. thermosaccharolyticum in complex with a plp:tdp-3-aminoquinovose aldimine 0.9231 34 361
6ewj-assembly1.cif.gz_A putative sugar aminotransferase spr1654 from streptococcus pneumoniae, apo-form 0.9227 23 367
6ewr-assembly1.cif.gz_B putative sugar aminotransferase spr1654 from streptococcus pneumoniae, pmp-form 0.9172 22 367
ID Description Score Start End Superfamily
1b9iA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9636 34 256 3.40.640.10
2po3B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9631 32 246 3.40.640.10
5u1zA01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9612 34 259 3.40.640.10
3bn1B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9549 23 259 3.40.640.10
2po3B01 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9543 32 246 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A359B0L3-F1-model_v4 Aminotransferase 0.9823 52 187 GO:0000271
GO:0008483
GO:0030170
AF-A0A5C6BNV9-F1-model_v4 dTDP-4-amino-4,6-dideoxy-D-glucose transaminase (EC 2.6.1.33) 0.9796 17 361 GO:0000271
GO:0019179
GO:0030170
AF-A0A349NWH6-F1-model_v4 deleted 0.9792 93 218
AF-A0A656GGJ3-F1-model_v4 Aminotransferase 0.9785 19 270 GO:0000271
GO:0008483
GO:0030170
AF-A0A3D2URI5-F1-model_v4 Aminotransferase 0.9757 19 211 GO:0000271
GO:0008483
GO:0030170

Map