F312779

General Info

Members Datasets Scaffolds Average Seq Length
204 171 196 234

Family's Representative Sequence

Representative Sequence 3300037418|Ga0395900_0041996|Ga0395900_0041996_1367_2209
Length 280
Sequence VNQSGWQRRRATSEEELMRTIGLLGGMSWESSIEYYRIINQRVRERLGGYHSARSVMFSFDFHEIEELQQTGDWDQAGRRLADAACRVEAAGADLLVLCTNTMHRLADQVQAAIGIPLLHIADATAQAVRGLAIDRVGLLGTRYTMEQDFYRGRLARHGFQVLVPDPPALQAVHRIIYDELVHGIVRPASRTLYLEVINALTGRGAQAVILGCTEIELLIKDGDADIPLLETARIHAVTAADVAVDHTDPPAPPASAESQAEPQLWVAHGPRPTRGVQGS

Samples

Sample ID Description Type Environment
1 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
2 2526164713 Paraburkholderia phenoliruptrix JPY366 Isolate Nodule
3 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
4 2643221615 Nocardioides sp. Root224 Isolate Unclassified
5 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
6 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
7 3001892409 Neobacillus rhizophilus FJAT-49825 Isolate Rhizosphere
8 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
9 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
10 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
11 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
14 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
15 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
22 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
23 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
24 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
25 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
26 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
29 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
32 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
33 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
40 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
41 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
45 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
46 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
47 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
65 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
66 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
67 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
68 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
69 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
70 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
71 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
72 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
73 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
74 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
75 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
76 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
77 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
78 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
79 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
80 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
81 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
82 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
83 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
84 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
85 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
86 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
87 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
88 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
89 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
90 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
91 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
92 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
93 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
94 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
95 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
96 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
97 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
98 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
99 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
102 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
103 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
104 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
105 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
106 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
107 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
108 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
109 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
110 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
111 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
112 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
113 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
114 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
115 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
116 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
117 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
118 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
119 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
120 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
121 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
124 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
125 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
126 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
129 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
130 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
131 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
132 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
133 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
134 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
135 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
136 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
137 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
138 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
139 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
140 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
141 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
142 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
143 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
144 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
145 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
146 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
147 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
148 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
153 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
154 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
155 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
160 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
161 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
164 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
165 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
166 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
167 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
168 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
169 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
170 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
171 8045864390 Aurantimonas endophytica KCTC 52296 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.08
Metatranscriptomes 0
Isolates 3.92

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.86
Nodule 0.98
Rhizoplane 1.96
Rhizosphere 84.31
Stem 0
Stem Tuber 0
Unclassified 5.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25156J39149_1002861 3300002705 Bacteria 5919
2 rootL2_10125951 3300003322 Bacteria 1852
3 Ga0055532_1001507 3300003758 Bacteria 6381
4 Ga0055524_1003158 3300003775 Bacteria 8114
5 Ga0055530_10002683 3300003791 Bacteria 11086
6 Ga0065707_10246064 3300005295 Bacteria 1140
7 Ga0070670_100486241 3300005331 Bacteria 1097
8 Ga0070680_100137555 3300005336 Bacteria 2047
9 Ga0068868_100198057 3300005338 Bacteria 1673
10 Ga0070689_100857851 3300005340 Bacteria 801
11 Ga0070668_100106085 3300005347 Bacteria 2232
12 Ga0070675_100382784 3300005354 Bacteria 1253
13 Ga0070659_100119928 3300005366 Bacteria 2129
14 Ga0070709_10196470 3300005434 Bacteria 1426
15 Ga0070705_100083282 3300005440 Bacteria 1971
16 Ga0070700_100074298 3300005441 Unclassified 2178
17 Ga0070694_100147915 3300005444 Bacteria 1713
18 Ga0070694_100292290 3300005444 Bacteria 1246
19 Ga0070662_100163141 3300005457 Bacteria 1744
20 Ga0070662_100205928 3300005457 Bacteria 1563
21 Ga0068867_100811255 3300005459 Bacteria 835
22 Ga0070698_100224985 3300005471 Bacteria 1809
23 Ga0070698_100334944 3300005471 Unclassified 1444
24 Ga0070699_100127824 3300005518 Bacteria 2239
25 Ga0070679_100473674 3300005530 Bacteria 1196
26 Ga0070672_100732171 3300005543 Bacteria 867
27 Ga0070695_100094021 3300005545 Bacteria 2007
28 Ga0070665_100053150 3300005548 Bacteria 4062
29 Ga0070665_100246061 3300005548 Bacteria 1789
30 Ga0070704_100057669 3300005549 Bacteria 2762
31 Ga0068862_100209561 3300005844 Archaea 1761
32 Ga0075365_10329988 3300006038 Bacteria 1074
33 Ga0075364_10002955 3300006051 Bacteria 9591
34 Ga0075362_10180821 3300006177 Bacteria 1022
35 Ga0068865_100130689 3300006881 Bacteria 1881
36 Ga0105245_10371153 3300009098 Bacteria 1422
37 Ga0105243_10347872 3300009148 Bacteria 1360
38 Ga0105242_10804823 3300009176 Bacteria 931
39 Ga0105248_10569404 3300009177 Bacteria 1278
40 Ga0105249_10263824 3300009553 Bacteria 1713
41 Ga0105249_10596384 3300009553 Archaea 1159
42 Ga0105249_10661658 3300009553 Bacteria 1103
43 Ga0105249_10981510 3300009553 Bacteria 913
44 Ga0157380_10029982 3300014326 Bacteria 4162
45 Ga0182008_10037352 3300014497 Bacteria 2429
46 Ga0157376_10238095 3300014969 Bacteria 1694
47 Ga0209147_100045 3300025229 Bacteria 299264
48 Ga0209676_1006624 3300025292 Bacteria 5661
49 Ga0209050_1000339 3300025298 Bacteria 92915
50 Ga0207682_10010985 3300025893 Bacteria 3546
51 Ga0207699_10203256 3300025906 Bacteria 1344
52 Ga0207660_10146737 3300025917 Bacteria 1809
53 Ga0207650_10422507 3300025925 Bacteria 1106
54 Ga0207650_10508136 3300025925 Bacteria 1008
55 Ga0207706_10001606 3300025933 Bacteria 22424
56 Ga0207706_10018288 3300025933 Bacteria 6306
57 Ga0207706_10177412 3300025933 Bacteria 1872
58 Ga0207709_10757534 3300025935 Bacteria 781
59 Ga0207670_10760098 3300025936 Bacteria 805
60 Ga0207691_10216255 3300025940 Bacteria 1663
61 Ga0207691_10683086 3300025940 Bacteria 866
62 Ga0207651_10104641 3300025960 Bacteria 2109
63 Ga0207708_10131218 3300026075 Bacteria 1959
64 Ga0207708_10137882 3300026075 Unclassified 1912
65 Ga0207648_10169931 3300026089 Bacteria 1927
66 Ga0207698_10304009 3300026142 Bacteria 1486
67 Ga0268266_10042392 3300028379 Bacteria 3887
68 Ga0268265_10332529 3300028380 Unclassified 1380
69 Ga0265338_10005881 3300028800 Bacteria 15822
70 Ga0316177_1035831 3300030731 Bacteria 3101
71 Ga0314311_1257269 3300030733 Bacteria 5424
72 Ga0265325_10001226 3300031241 Bacteria 18278
73 Ga0265340_10000570 3300031247 Bacteria 20515
74 Ga0265339_10020145 3300031249 Bacteria 3901
75 Ga0316579_10016897 3300031691 Bacteria 3195
76 Ga0316579_10029970 3300031691 Bacteria 2484
77 Ga0316576_10012417 3300031727 Bacteria 5625
78 Ga0316577_10004383 3300031733 Bacteria 7281
79 Ga0316577_10042332 3300031733 Unclassified 2548
80 Ga0307410_10133797 3300031852 Bacteria 1825
81 Ga0307410_10501396 3300031852 Bacteria 999
82 Ga0326468_10005266 3300031889 Bacteria 1157
83 Ga0307406_10016814 3300031901 Bacteria 4255
84 Ga0307406_10537870 3300031901 Bacteria 954
85 Ga0307409_100798253 3300031995 Bacteria 951
86 Ga0307416_100396562 3300032002 Bacteria 1416
87 Ga0307416_100832649 3300032002 Bacteria 1020
88 Ga0307414_10688875 3300032004 Bacteria 924
89 Ga0307415_100438097 3300032126 Bacteria 1126
90 Ga0316574_0032610 3300035398 Unclassified 3166
91 Ga0316574_0149966 3300035398 Bacteria 1502
92 Ga0373933_0600515 3300035724 Bacteria 723
93 Ga0316582_0002236 3300036647 Bacteria 8999
94 Ga0316582_0005866 3300036647 Bacteria 6386
95 Ga0316582_0009230 3300036647 Bacteria 5342
96 Ga0316582_0117361 3300036647 Bacteria 1778
97 Ga0316582_0444368 3300036647 Bacteria 894
98 Ga0316584_0043553 3300036712 Bacteria 3347
99 Ga0316584_0067039 3300036712 Bacteria 2690
100 Ga0395900_0041996 3300037418 Bacteria 4712
101 Ga0395898_0037657 3300037466 Bacteria 4797
102 Ga0316581_0077105 3300037588 Bacteria 1024
103 Ga0436364_0118814 3300037853 Bacteria 2027
104 Ga0395901_0023643 3300038443 Bacteria 6300
105 Ga0395901_0538095 3300038443 Bacteria 1185
106 Ga0400484_03504 3300038725 Bacteria 1977
107 Ga0400486_23511 3300038742 Bacteria 15451
108 Ga0400483_029863 3300039062 Bacteria 6895
109 Ga0436363_1196525 3300039450 Bacteria 705
110 Ga0439444_0009611 3300042437 Bacteria 1528
111 Ga0439464_0001922 3300042439 Bacteria 5025
112 Ga0451577_0193468 3300042876 Bacteria 1835
113 Ga0451577_0216428 3300042876 Bacteria 1731
114 Ga0451577_0229410 3300042876 Bacteria 1679
115 Ga0466972_0000656 3300044658 Bacteria 16703
116 Ga0466972_0164162 3300044658 Bacteria 1043
117 Ga0466961_0057622 3300044693 Bacteria 2473
118 Ga0466963_0028910 3300044694 Bacteria 3563
119 Ga0466964_0001059 3300044706 Bacteria 9192
120 Ga0466964_0053299 3300044706 Bacteria 1665
121 Ga0453684_0002098 3300044712 Bacteria 50342
122 Ga0453684_0018740 3300044712 Bacteria 10599
123 Ga0453684_0053405 3300044712 Bacteria 5275
124 Ga0453684_0060695 3300044712 Bacteria 4859
125 Ga0466971_0081124 3300044719 Bacteria 1479
126 Ga0466970_0016382 3300044765 Bacteria 3820
127 Ga0466957_0000861 3300044842 Bacteria 15602
128 Ga0466958_0015204 3300045836 Bacteria 4406
129 Ga0466967_0008546 3300045976 Bacteria 7517
130 Ga0495653_0025861 3300046463 Bacteria 4710
131 Ga0495650_0000488 3300046471 Bacteria 60332
132 Ga0495582_0344334 3300046473 Bacteria 858
133 Ga0495605_0000194 3300046474 Bacteria 76134
134 Ga0495662_0024423 3300046476 Bacteria 2916
135 Ga0495664_0042204 3300046477 Bacteria 2700
136 Ga0495584_0000020 3300046491 Bacteria 132682
137 Ga0495607_0011038 3300046501 Bacteria 6033
138 Ga0495583_0008393 3300046506 Bacteria 6321
139 Ga0495606_0000300 3300046507 Bacteria 85461
140 Ga0495606_0026547 3300046507 Bacteria 4127
141 Ga0495628_0044279 3300046516 Bacteria 3541
142 Ga0495631_0027008 3300046518 Bacteria 2630
143 Ga0495632_0033183 3300046519 Bacteria 2652
144 Ga0495637_0000118 3300046520 Bacteria 58203
145 Ga0495643_0004223 3300046522 Bacteria 10170
146 Ga0495644_0000256 3300046523 Bacteria 24532
147 Ga0495652_0300027 3300046529 Bacteria 1168
148 Ga0495654_0098625 3300046530 Bacteria 1347
149 Ga0495665_0024174 3300046531 Bacteria 3264
150 Ga0495640_0214263 3300046533 Bacteria 1216
151 Ga0495645_0012174 3300046543 Bacteria 6058
152 Ga0495668_0034122 3300046616 Bacteria 2856
153 Ga0495634_0053789 3300046642 Bacteria 2695
154 Ga0495611_0019387 3300046648 Bacteria 2921
155 Ga0495635_0053656 3300046663 Bacteria 2777
156 Ga0495661_0000001 3300046665 Bacteria 898372
157 Ga0495646_0042026 3300046680 Bacteria 2807
158 Ga0495613_0063864 3300046689 Bacteria 2693
159 Ga0495670_0027761 3300046691 Bacteria 2806
160 Ga0495671_0019294 3300046692 Bacteria 3607
161 Ga0495649_0006695 3300046694 Bacteria 7147
162 Ga0495600_0042687 3300046809 Bacteria 2956
163 Ga0495660_0006356 3300046810 Bacteria 7000
164 Ga0495674_0116028 3300047319 Bacteria 2265
165 Ga0495672_0024818 3300047320 Bacteria 3854
166 Ga0495680_0068097 3300047322 Bacteria 2720
167 Ga0495683_0062385 3300047323 Bacteria 1844
168 Ga0495675_0049917 3300047444 Bacteria 2659
169 Ga0495679_000174 3300047446 Bacteria 58164
170 Ga0495673_0028792 3300047469 Bacteria 2627
171 Ga0495681_0000217 3300047470 Bacteria 47740
172 Ga0495684_0009180 3300047471 Bacteria 7637
173 Ga0495686_0064915 3300047472 Bacteria 2258
174 Ga0496104_0919644 3300048907 Bacteria 780
175 Ga0496109_0565753 3300048912 Unclassified 1072
176 Ga0496114_0004770 3300048917 Bacteria 10553
177 Ga0496114_0176323 3300048917 Bacteria 1865
178 Ga0496122_0044747 3300048925 Bacteria 3450
179 Ga0495678_088410 3300049459 Bacteria 1096
180 Ga0501032_0119719 3300049569 Bacteria 1741
181 Ga0501039_0085409 3300049575 Bacteria 2458
182 Ga0501041_0025098 3300049577 Bacteria 3582
183 Ga0501046_0178016 3300049580 Bacteria 1592
184 Ga0501048_0113139 3300049582 Bacteria 1917
185 Ga0501072_0010634 3300049588 Bacteria 7009
186 Ga0501075_0155215 3300049591 Bacteria 1745
187 Ga0501076_0152628 3300049592 Bacteria 1879
188 Ga0501044_0262565 3300049823 Bacteria 1665
189 Ga0501045_0032748 3300049824 Bacteria 3767
190 nmdc:mga00v17_176254_c1 3300050491 Bacteria 1379
191 nmdc:mga0yw44_235186_c1 3300050492 Bacteria 1217
192 Ga0500643_003765 3300053087 Bacteria 7113
193 Ga0500608_014017 3300053122 Bacteria 3568
194 Ga0500627_0049373 3300053158 Bacteria 1830
195 Ga0466962_0024469 3300061719 Bacteria 2900
196 Ga0530510_0462846 3300061734 Bacteria 960

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300031852 Ga0307410_10133797 Ga0307410_101337973 187
2 3300031901 Ga0307406_10537870 Ga0307406_105378702 187
3 3300032004 Ga0307414_10688875 Ga0307414_106888752 187
4 3300053122 Ga0500608_014017 Ga0500608_014017_2432_3013 190
5 3300039450 Ga0436363_1196525 Ga0436363_1196525_46_651 193
6 3300046689 Ga0495613_0063864 Ga0495613_0063864_1880_2572 219
7 3300005336 Ga0070680_100137555 Ga0070680_1001375552 221
8 3300005434 Ga0070709_10196470 Ga0070709_101964702 221
9 3300005530 Ga0070679_100473674 Ga0070679_1004736742 221
10 3300009148 Ga0105243_10347872 Ga0105243_103478721 221
11 3300009176 Ga0105242_10804823 Ga0105242_108048231 221
12 3300009553 Ga0105249_10661658 Ga0105249_106616581 221
13 3300025906 Ga0207699_10203256 Ga0207699_102032561 221
14 3300025917 Ga0207660_10146737 Ga0207660_101467372 221
15 3300031852 Ga0307410_10501396 Ga0307410_105013962 221
16 3300032002 Ga0307416_100832649 Ga0307416_1008326491 221
17 3300031249 Ga0265339_10020145 Ga0265339_100201452 222
18 3300049580 Ga0501046_0178016 Ga0501046_0178016_798_1472 224
19 iso_pu_bacteria 3001892409 3001897217 224
20 iso_pu_bacteria 2643221615 2644092803 225
21 iso_pu_bacteria 2643221657 2644322416 225
22 iso_pu_bacteria 2919130084 2919131635 225
23 iso_pu_bacteria 2643221581 2643916254 227
24 iso_pu_bacteria 2513237087 2513592088 228
25 iso_pu_bacteria 2526164713 2527075512 228
26 3300005457 Ga0070662_100205928 Ga0070662_1002059282 229
27 3300006881 Ga0068865_100130689 Ga0068865_1001306892 229
28 3300014497 Ga0182008_10037352 Ga0182008_100373523 229
29 3300025933 Ga0207706_10177412 Ga0207706_101774122 229
30 3300026142 Ga0207698_10304009 Ga0207698_103040092 229
31 3300037853 Ga0436364_0118814 Ga0436364_0118814_158_847 229
32 3300038725 Ga0400484_03504 Ga0400484_03504_1133_1822 229
33 3300044658 Ga0466972_0164162 Ga0466972_0164162_256_954 229
34 3300044693 Ga0466961_0057622 Ga0466961_0057622_1091_1789 229
35 3300044694 Ga0466963_0028910 Ga0466963_0028910_1514_2212 229
36 3300044706 Ga0466964_0001059 Ga0466964_0001059_7113_7811 229
37 3300044719 Ga0466971_0081124 Ga0466971_0081124_165_863 229
38 3300044765 Ga0466970_0016382 Ga0466970_0016382_176_874 229
39 3300044842 Ga0466957_0000861 Ga0466957_0000861_3314_4012 229
40 3300045836 Ga0466958_0015204 Ga0466958_0015204_1343_2041 229
41 3300045976 Ga0466967_0008546 Ga0466967_0008546_1475_2173 229
42 3300048917 Ga0496114_0176323 Ga0496114_0176323_393_1082 229
43 3300053087 Ga0500643_003765 Ga0500643_003765_3222_3911 229
44 3300061719 Ga0466962_0024469 Ga0466962_0024469_1765_2463 229
45 3300003322 rootL2_10125951 rootL2_101259511 230
46 3300003775 Ga0055524_1003158 Ga0055524_10031585 230
47 3300003791 Ga0055530_10002683 Ga0055530_100026832 230
48 3300005440 Ga0070705_100083282 Ga0070705_1000832823 230
49 3300005444 Ga0070694_100147915 Ga0070694_1001479153 230
50 3300005457 Ga0070662_100163141 Ga0070662_1001631412 230
51 3300005459 Ga0068867_100811255 Ga0068867_1008112551 230
52 3300005471 Ga0070698_100224985 Ga0070698_1002249853 230
53 3300005518 Ga0070699_100127824 Ga0070699_1001278242 230
54 3300005543 Ga0070672_100732171 Ga0070672_1007321711 230
55 3300005545 Ga0070695_100094021 Ga0070695_1000940212 230
56 3300005548 Ga0070665_100053150 Ga0070665_1000531501 230
57 3300005549 Ga0070704_100057669 Ga0070704_1000576692 230
58 3300014326 Ga0157380_10029982 Ga0157380_100299822 230
59 3300025298 Ga0209050_1000339 Ga0209050_100033919 230
60 3300025933 Ga0207706_10001606 Ga0207706_100016069 230
61 3300025935 Ga0207709_10757534 Ga0207709_107575341 230
62 3300025940 Ga0207691_10216255 Ga0207691_102162552 230
63 3300026089 Ga0207648_10169931 Ga0207648_101699313 230
64 3300028379 Ga0268266_10042392 Ga0268266_100423924 230
65 3300031733 Ga0316577_10004383 Ga0316577_100043835 230
66 3300031889 Ga0326468_10005266 Ga0326468_100052662 230
67 3300032002 Ga0307416_100396562 Ga0307416_1003965622 230
68 3300032126 Ga0307415_100438097 Ga0307415_1004380971 230
69 3300035724 Ga0373933_0600515 Ga0373933_0600515_12_704 230
70 3300036647 Ga0316582_0002236 Ga0316582_0002236_2215_2925 230
71 3300036712 Ga0316584_0067039 Ga0316584_0067039_1611_2303 230
72 3300038742 Ga0400486_23511 Ga0400486_23511_205_924 230
73 3300042876 Ga0451577_0193468 Ga0451577_0193468_928_1620 230
74 3300042876 Ga0451577_0216428 Ga0451577_0216428_353_1045 230
75 3300044712 Ga0453684_0002098 Ga0453684_0002098_38953_39645 230
76 3300044712 Ga0453684_0053405 Ga0453684_0053405_1245_1937 230
77 3300044712 Ga0453684_0060695 Ga0453684_0060695_2200_2892 230
78 3300046463 Ga0495653_0025861 Ga0495653_0025861_1794_2486 230
79 3300046471 Ga0495650_0000488 Ga0495650_0000488_13606_14298 230
80 3300046473 Ga0495582_0344334 Ga0495582_0344334_72_764 230
81 3300046474 Ga0495605_0000194 Ga0495605_0000194_38750_39442 230
82 3300046476 Ga0495662_0024423 Ga0495662_0024423_368_1060 230
83 3300046477 Ga0495664_0042204 Ga0495664_0042204_1852_2544 230
84 3300046491 Ga0495584_0000020 Ga0495584_0000020_45960_46652 230
85 3300046501 Ga0495607_0011038 Ga0495607_0011038_378_1070 230
86 3300046506 Ga0495583_0008393 Ga0495583_0008393_3066_3758 230
87 3300046507 Ga0495606_0000300 Ga0495606_0000300_67445_68137 230
88 3300046516 Ga0495628_0044279 Ga0495628_0044279_243_935 230
89 3300046518 Ga0495631_0027008 Ga0495631_0027008_1430_2122 230
90 3300046519 Ga0495632_0033183 Ga0495632_0033183_823_1515 230
91 3300046520 Ga0495637_0000118 Ga0495637_0000118_11339_12031 230
92 3300046522 Ga0495643_0004223 Ga0495643_0004223_2519_3211 230
93 3300046523 Ga0495644_0000256 Ga0495644_0000256_12443_13135 230
94 3300046529 Ga0495652_0300027 Ga0495652_0300027_352_1044 230
95 3300046530 Ga0495654_0098625 Ga0495654_0098625_275_967 230
96 3300046531 Ga0495665_0024174 Ga0495665_0024174_767_1459 230
97 3300046533 Ga0495640_0214263 Ga0495640_0214263_233_925 230
98 3300046543 Ga0495645_0012174 Ga0495645_0012174_243_935 230
99 3300046616 Ga0495668_0034122 Ga0495668_0034122_509_1201 230
100 3300046642 Ga0495634_0053789 Ga0495634_0053789_123_815 230
101 3300046648 Ga0495611_0019387 Ga0495611_0019387_1183_1875 230
102 3300046663 Ga0495635_0053656 Ga0495635_0053656_1843_2535 230
103 3300046665 Ga0495661_0000001 Ga0495661_0000001_565453_566145 230
104 3300046680 Ga0495646_0042026 Ga0495646_0042026_250_942 230
105 3300046691 Ga0495670_0027761 Ga0495670_0027761_1881_2573 230
106 3300046692 Ga0495671_0019294 Ga0495671_0019294_2735_3427 230
107 3300046694 Ga0495649_0006695 Ga0495649_0006695_151_843 230
108 3300046809 Ga0495600_0042687 Ga0495600_0042687_1687_2379 230
109 3300046810 Ga0495660_0006356 Ga0495660_0006356_4654_5346 230
110 3300047319 Ga0495674_0116028 Ga0495674_0116028_1331_2023 230
111 3300047320 Ga0495672_0024818 Ga0495672_0024818_3037_3729 230
112 3300047322 Ga0495680_0068097 Ga0495680_0068097_147_839 230
113 3300047444 Ga0495675_0049917 Ga0495675_0049917_136_828 230
114 3300047446 Ga0495679_000174 Ga0495679_000174_45987_46679 230
115 3300047469 Ga0495673_0028792 Ga0495673_0028792_181_873 230
116 3300047470 Ga0495681_0000217 Ga0495681_0000217_35960_36652 230
117 3300047471 Ga0495684_0009180 Ga0495684_0009180_243_935 230
118 3300047472 Ga0495686_0064915 Ga0495686_0064915_402_1094 230
119 3300049459 Ga0495678_088410 Ga0495678_088410_19_711 230
120 3300049569 Ga0501032_0119719 Ga0501032_0119719_729_1421 230
121 3300049823 Ga0501044_0262565 Ga0501044_0262565_612_1304 230
122 iso_pu_bacteria 8045864390 8045868122 230
123 3300005295 Ga0065707_10246064 Ga0065707_102460641 231
124 3300005331 Ga0070670_100486241 Ga0070670_1004862411 231
125 3300005338 Ga0068868_100198057 Ga0068868_1001980572 231
126 3300005340 Ga0070689_100857851 Ga0070689_1008578511 231
127 3300005354 Ga0070675_100382784 Ga0070675_1003827842 231
128 3300005366 Ga0070659_100119928 Ga0070659_1001199282 231
129 3300005441 Ga0070700_100074298 Ga0070700_1000742984 231
130 3300005444 Ga0070694_100292290 Ga0070694_1002922901 231
131 3300005471 Ga0070698_100334944 Ga0070698_1003349442 231
132 3300005844 Ga0068862_100209561 Ga0068862_1002095612 231
133 3300006051 Ga0075364_10002955 Ga0075364_100029552 231
134 3300009098 Ga0105245_10371153 Ga0105245_103711531 231
135 3300009177 Ga0105248_10569404 Ga0105248_105694041 231
136 3300009553 Ga0105249_10263824 Ga0105249_102638242 231
137 3300009553 Ga0105249_10596384 Ga0105249_105963842 231
138 3300009553 Ga0105249_10981510 Ga0105249_109815101 231
139 3300025292 Ga0209676_1006624 Ga0209676_10066241 231
140 3300025893 Ga0207682_10010985 Ga0207682_100109852 231
141 3300025925 Ga0207650_10422507 Ga0207650_104225072 231
142 3300025925 Ga0207650_10508136 Ga0207650_105081362 231
143 3300025933 Ga0207706_10018288 Ga0207706_100182882 231
144 3300025936 Ga0207670_10760098 Ga0207670_107600981 231
145 3300025940 Ga0207691_10683086 Ga0207691_106830861 231
146 3300025960 Ga0207651_10104641 Ga0207651_101046412 231
147 3300026075 Ga0207708_10131218 Ga0207708_101312182 231
148 3300026075 Ga0207708_10137882 Ga0207708_101378822 231
149 3300028380 Ga0268265_10332529 Ga0268265_103325292 231
150 3300028800 Ga0265338_10005881 Ga0265338_1000588115 231
151 3300031241 Ga0265325_10001226 Ga0265325_100012268 231
152 3300031247 Ga0265340_10000570 Ga0265340_1000057023 231
153 3300031901 Ga0307406_10016814 Ga0307406_100168142 231
154 3300037418 Ga0395900_0041996 Ga0395900_0041996_1367_2209 231
155 3300037466 Ga0395898_0037657 Ga0395898_0037657_1394_2236 231
156 3300038443 Ga0395901_0023643 Ga0395901_0023643_4371_5213 231
157 3300038443 Ga0395901_0538095 Ga0395901_0538095_14_730 231
158 3300042437 Ga0439444_0009611 Ga0439444_0009611_309_1109 231
159 3300042439 Ga0439464_0001922 Ga0439464_0001922_1855_2655 231
160 3300044658 Ga0466972_0000656 Ga0466972_0000656_11072_11770 231
161 3300044706 Ga0466964_0053299 Ga0466964_0053299_249_947 231
162 3300044712 Ga0453684_0018740 Ga0453684_0018740_8360_9055 231
163 3300048907 Ga0496104_0919644 Ga0496104_0919644_68_763 231
164 3300048912 Ga0496109_0565753 Ga0496109_0565753_293_1006 231
165 3300048917 Ga0496114_0004770 Ga0496114_0004770_6907_7602 231
166 3300049575 Ga0501039_0085409 Ga0501039_0085409_969_1664 231
167 3300049577 Ga0501041_0025098 Ga0501041_0025098_769_1464 231
168 3300049582 Ga0501048_0113139 Ga0501048_0113139_99_794 231
169 3300049588 Ga0501072_0010634 Ga0501072_0010634_1684_2379 231
170 3300049591 Ga0501075_0155215 Ga0501075_0155215_282_977 231
171 3300049592 Ga0501076_0152628 Ga0501076_0152628_1070_1765 231
172 3300049824 Ga0501045_0032748 Ga0501045_0032748_2831_3526 231
173 3300050491 nmdc:mga00v17_176254_c1 nmdc:mga00v17_176254_c1_88_792 231
174 3300002705 JGI25156J39149_1002861 JGI25156J39149_10028614 232
175 3300003758 Ga0055532_1001507 Ga0055532_10015072 232
176 3300005347 Ga0070668_100106085 Ga0070668_1001060852 232
177 3300005548 Ga0070665_100246061 Ga0070665_1002460612 232
178 3300006038 Ga0075365_10329988 Ga0075365_103299881 232
179 3300006177 Ga0075362_10180821 Ga0075362_101808211 232
180 3300014969 Ga0157376_10238095 Ga0157376_102380953 232
181 3300025229 Ga0209147_100045 Ga0209147_10004543 232
182 3300030731 Ga0316177_1035831 Ga0316177_10358311 232
183 3300030733 Ga0314311_1257269 Ga0314311_12572693 232
184 3300031691 Ga0316579_10016897 Ga0316579_100168972 232
185 3300031691 Ga0316579_10029970 Ga0316579_100299702 232
186 3300031727 Ga0316576_10012417 Ga0316576_100124173 232
187 3300031733 Ga0316577_10042332 Ga0316577_100423322 232
188 3300031995 Ga0307409_100798253 Ga0307409_1007982531 232
189 3300035398 Ga0316574_0032610 Ga0316574_0032610_722_1495 232
190 3300035398 Ga0316574_0149966 Ga0316574_0149966_108_935 232
191 3300036647 Ga0316582_0005866 Ga0316582_0005866_4435_5142 232
192 3300036647 Ga0316582_0009230 Ga0316582_0009230_2169_2942 232
193 3300036647 Ga0316582_0117361 Ga0316582_0117361_783_1610 232
194 3300036647 Ga0316582_0444368 Ga0316582_0444368_35_736 232
195 3300036712 Ga0316584_0043553 Ga0316584_0043553_2199_3026 232
196 3300037588 Ga0316581_0077105 Ga0316581_0077105_96_803 232
197 3300039062 Ga0400483_029863 Ga0400483_029863_1154_1861 232
198 3300042876 Ga0451577_0229410 Ga0451577_0229410_222_920 232
199 3300046507 Ga0495606_0026547 Ga0495606_0026547_2614_3315 232
200 3300047323 Ga0495683_0062385 Ga0495683_0062385_285_983 232
201 3300048925 Ga0496122_0044747 Ga0496122_0044747_2155_2940 232
202 3300050492 nmdc:mga0yw44_235186_c1 nmdc:mga0yw44_235186_c1_106_828 232
203 3300053158 Ga0500627_0049373 Ga0500627_0049373_91_813 232
204 3300061734 Ga0530510_0462846 Ga0530510_0462846_29_733 232

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01177

Asp_Glu_race

Asp/Glu/Hydantoin racemase

24

240

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5hqt-assembly1.cif.gz_A crystal structure of an aspartate/glutamate racemase from escherichia coli o157 0.9665 1 232
5elm-assembly2.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9644 1 232
5hqt-assembly1.cif.gz_A crystal structure of an aspartate/glutamate racemase from escherichia coli o157 0.9625 1 232
5elm-assembly2.cif.gz_D error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) 0.9604 1 232
3ojc-assembly1.cif.gz_A crystal structure of a putative asp/glu racemase from yersinia pestis 0.9585 1 229
ID Description Score Start End Superfamily
af_P03813_105_213_3.40.50.1860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9962 106 213 3.40.50.1860
af_P03813_2_104_3.40.50.1860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9858 2 103 3.40.50.1860
5ellB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9832 1 103 3.40.50.1860
af_P03813_2_229_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.982 2 227 3.40.50.720
af_P03813_105_213_3.40.50.1860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9781 106 213 3.40.50.1860
ID Description Score Start End GO Terms
AF-K0DNG1-F1-model_v4 Aspartate racemase 0.9982 1 232 GO:0047661
AF-A0A6S7CLE7-F1-model_v4 L-aspartate/glutamate-specific racemase (EC 5.1.1.13) 0.9976 1 232 GO:0047689
AF-A0A4P8IMZ1-F1-model_v4 Aspartate/glutamate racemase family protein 0.9974 1 228 GO:0047661
AF-A0A107ASH0-F1-model_v4 Aspartate racemase 0.996 1 229 GO:0047661
AF-A0A088UQJ8-F1-model_v4 deleted 0.9957 1 229

Feature Viewer

pLDDT pTM Quality
94.91 0.91 High
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Predicted Structure (AlphaFold2)

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