F308326
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 201 | 149 | 402 | 427 |
Family's Representative Sequence
| Representative Sequence | 3300006028|Ga0070717_10092521|Ga0070717_100925212 |
| Length | 490 |
| Sequence | VASDGFVVIVEIWRAVHIVSTAIKATLFFGNDACYAALACATVAPEWAQPDGMRRTLMAPAPTARQVALDLLGAVLRRKRPLDDAIEDNPDMSSLSVRDRAFARLLVATVLRRLGQIDALVTDCLNTPLAPRAAIVQDILRLGISQLLFLRTPPHAAVATSVDLAHHRGLLSHKGLVNAVLRRLSVEGAGRVERQDAARLNTPEWLWHSWSRAYGDDLARAIATAHLKEAPLDLTVRTDEEAWQEKLQATKLPTGSLRRPAGGSVMSLPGYAEGAWWIQDAAASLPVRLFNGIAGREVVDLCAAPGGKTAQLANAGAQVTAVDRSTRRLDRLVTNLNRLQLRVEAIAADALTWRPDHPVDAVLLDAPCTATGAIRRHPDVPHLKQPEDVARLAVVQENLLNAAVDMLRPGGTLVYCTCSLEPQEGPERVAALLRSGAPVERRPLKPGEIDAPPEWVTAEGDLRTLPCHLAEFDGVDGFYSARLVKTGAAP |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 2 | 3300005331 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG | Metagenome | Rhizosphere |
| 3 | 3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Metagenome | Rhizosphere |
| 4 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 5 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 6 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 7 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 8 | 3300005435 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 10 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005440 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005444 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG | Metagenome | Rhizosphere |
| 13 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 14 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Metagenome | Rhizosphere |
| 16 | 3300005518 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005530 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005536 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG | Metagenome | Rhizosphere |
| 19 | 3300005545 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG | Metagenome | Rhizosphere |
| 20 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 22 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 23 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 24 | 3300005983 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 | Metagenome | Rhizosphere |
| 25 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 26 | 3300006163 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 28 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 29 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 30 | 3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Metagenome | Rhizosphere |
| 31 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 34 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Metagenome | Rhizosphere |
| 36 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 37 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300020075 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 41 | 3300020076 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) | Metatranscriptome | Rhizosphere |
| 42 | 3300020081 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 43 | 3300021358 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 | Metagenome | Rhizosphere |
| 44 | 3300021377 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 | Metagenome | Unclassified |
| 45 | 3300021384 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 | Metagenome | Unclassified |
| 46 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 47 | 3300022467 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) | Metatranscriptome | Rhizosphere |
| 48 | 3300024227 | Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 | Metagenome | Rhizosphere |
| 49 | 3300025284 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025294 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025898 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025912 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025916 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025921 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025939 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 73 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 77 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 78 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 79 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 80 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 81 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 82 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 83 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 84 | 3300035117 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 | Metagenome | Rhizosphere |
| 85 | 3300035118 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 | Metagenome | Rhizosphere |
| 86 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 87 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 88 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 89 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 90 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 91 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 92 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 93 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 94 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 95 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 96 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 97 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 98 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 99 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 100 | 3300046454 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046512 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 104 | 3300046535 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere | Metagenome | Rhizosphere |
| 105 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 106 | 3300046663 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere | Metagenome | Rhizosphere |
| 107 | 3300046678 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere | Metagenome | Rhizosphere |
| 108 | 3300046809 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere | Metagenome | Rhizosphere |
| 109 | 3300047322 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere | Metagenome | Rhizosphere |
| 110 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 111 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 112 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 113 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 116 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 121 | 3300050509 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 126 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300053091 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere | Metagenome | Endosphere |
| 129 | 3300053109 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere | Metagenome | Endosphere |
| 130 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 131 | 3300053122 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere | Metagenome | Endosphere |
| 132 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 133 | 3300053148 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere | Metagenome | Endosphere |
| 134 | 3300053177 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere | Metagenome | Endosphere |
| 135 | 3300053729 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere | Metagenome | Endosphere |
| 136 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 137 | 2522572158 | Azospirillum halopraeferens DSM 3675 | Isolate | Unclassified |
| 138 | 2524023250 | Niveispirillum irakense DSM 11586 | Isolate | Unclassified |
| 139 | 2643221598 | Phenylobacterium sp. Root700 | Isolate | Unclassified |
| 140 | 2643221614 | Phenylobacterium sp. Root77 | Isolate | Unclassified |
| 141 | 2643221661 | Phenylobacterium sp. Root1277 | Isolate | Unclassified |
| 142 | 2643221666 | Phenylobacterium sp. Root1290 | Isolate | Unclassified |
| 143 | 2821443989 | Inquilinus ginsengisoli 584 | Isolate | Unclassified |
| 144 | 2842333319 | Skermanella aerolata SEMIA 4010 | Isolate | Nodule |
| 145 | 2844533157 | Inquilinus sp. R-72501 v. 2 | Isolate | Unclassified |
| 146 | 2899275550 | Paracoccus hibiscisoli CCTCC AB2016182 | Isolate | Rhizosphere |
| 147 | 2929199973 | Roseomonas sp. R-73070 Hybrid assembly | Isolate | Unclassified |
| 148 | 8055909800 | Plastoroseomonas hellenica LMG 31523 | Isolate | Unclassified |
| 149 | 8057132660 | Paracoccus rhizosphaerae LMG 21293 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 91.54 |
| Metatranscriptomes | 1.99 |
| Isolates | 6.47 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8.46 |
| Nodule | 0.5 |
| Rhizoplane | 1 |
| Rhizosphere | 76.12 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 0 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0070717_10092521 | 3300006028 | Bacteria | 2555 |
| 2 | Ga0070670_100000004 | 3300005331 | Bacteria | 392110 |
| 3 | Ga0070680_100006198 | 3300005336 | Bacteria | 9071 |
| 4 | Ga0070668_100001643 | 3300005347 | Bacteria | 16208 |
| 5 | Ga0070671_100015083 | 3300005355 | Bacteria | 6241 |
| 6 | Ga0070671_100015904 | 3300005355 | Bacteria | 6079 |
| 7 | Ga0070667_100000105 | 3300005367 | Bacteria | 106633 |
| 8 | Ga0070709_10018745 | 3300005434 | Bacteria | 3992 |
| 9 | Ga0070714_100004679 | 3300005435 | Bacteria | 10342 |
| 10 | Ga0070714_100121226 | 3300005435 | Bacteria | 2327 |
| 11 | Ga0070714_100136166 | 3300005435 | Bacteria | 2200 |
| 12 | Ga0070714_100191348 | 3300005435 | Bacteria | 1867 |
| 13 | Ga0070713_100011724 | 3300005436 | Bacteria | 6398 |
| 14 | Ga0070711_100003640 | 3300005439 | Bacteria | 9007 |
| 15 | Ga0070705_100022635 | 3300005440 | Bacteria | 3361 |
| 16 | Ga0070694_100002699 | 3300005444 | Bacteria | 10521 |
| 17 | Ga0070681_10005513 | 3300005458 | Bacteria | 12226 |
| 18 | Ga0070681_10084372 | 3300005458 | Bacteria | 3129 |
| 19 | Ga0070681_10176363 | 3300005458 | Bacteria | 2059 |
| 20 | Ga0070707_100201296 | 3300005468 | Bacteria | 1941 |
| 21 | Ga0070698_100001308 | 3300005471 | Bacteria | 27724 |
| 22 | Ga0070698_100196683 | 3300005471 | Bacteria | 1953 |
| 23 | Ga0070698_100336746 | 3300005471 | Bacteria | 1440 |
| 24 | Ga0070699_100086213 | 3300005518 | Bacteria | 2740 |
| 25 | Ga0070679_100144005 | 3300005530 | Bacteria | 2361 |
| 26 | Ga0070697_100063787 | 3300005536 | Bacteria | 3009 |
| 27 | Ga0070695_100032086 | 3300005545 | Bacteria | 3282 |
| 28 | Ga0070665_100001194 | 3300005548 | Bacteria | 31673 |
| 29 | Ga0070665_100007729 | 3300005548 | Bacteria | 10914 |
| 30 | Ga0068855_100063516 | 3300005563 | Bacteria | 4309 |
| 31 | Ga0068863_100000560 | 3300005841 | Bacteria | 37696 |
| 32 | Ga0068860_100000077 | 3300005843 | Bacteria | 171297 |
| 33 | Ga0081540_1001876 | 3300005983 | Bacteria | 17587 |
| 34 | Ga0070717_10001590 | 3300006028 | Bacteria | 15704 |
| 35 | Ga0070717_10002039 | 3300006028 | Bacteria | 14143 |
| 36 | Ga0070717_10112746 | 3300006028 | Bacteria | 2321 |
| 37 | Ga0075368_10004990 | 3300006042 | Bacteria | 4535 |
| 38 | Ga0070715_10046221 | 3300006163 | Bacteria | 1850 |
| 39 | Ga0070712_100008924 | 3300006175 | Bacteria | 6314 |
| 40 | Ga0070712_100010834 | 3300006175 | Bacteria | 5765 |
| 41 | Ga0075430_100121492 | 3300006846 | Bacteria | 2177 |
| 42 | Ga0075435_100070328 | 3300007076 | Bacteria | 2856 |
| 43 | Ga0099795_10006614 | 3300007788 | Bacteria | 3175 |
| 44 | Ga0099795_10032647 | 3300007788 | Bacteria | 1802 |
| 45 | Ga0099795_10035811 | 3300007788 | Bacteria | 1738 |
| 46 | Ga0105240_10089085 | 3300009093 | Bacteria | 3774 |
| 47 | Ga0105240_10093917 | 3300009093 | Bacteria | 3660 |
| 48 | Ga0105240_10118236 | 3300009093 | Bacteria | 3194 |
| 49 | Ga0105240_10159003 | 3300009093 | Bacteria | 2685 |
| 50 | Ga0105245_10002744 | 3300009098 | Bacteria | 15829 |
| 51 | Ga0105248_10061284 | 3300009177 | Bacteria | 4224 |
| 52 | Ga0105249_10021533 | 3300009553 | Bacteria | 5772 |
| 53 | Ga0099796_10023450 | 3300010159 | Bacteria | 1927 |
| 54 | Ga0157370_10004314 | 3300013104 | Bacteria | 16344 |
| 55 | Ga0157370_10103736 | 3300013104 | Bacteria | 2661 |
| 56 | Ga0157369_10006736 | 3300013105 | Bacteria | 13258 |
| 57 | Ga0157369_10092375 | 3300013105 | Bacteria | 3230 |
| 58 | Ga0163162_10364769 | 3300013306 | Bacteria | 1577 |
| 59 | Ga0163163_10193670 | 3300014325 | Bacteria | 2081 |
| 60 | Ga0206349_1426686 | 3300020075 | Bacteria | 1822 |
| 61 | Ga0206355_1651589 | 3300020076 | Bacteria | 1746 |
| 62 | Ga0206354_10229447 | 3300020081 | Bacteria | 2214 |
| 63 | Ga0213873_10002371 | 3300021358 | Bacteria | 3254 |
| 64 | Ga0213874_10015916 | 3300021377 | Bacteria | 1992 |
| 65 | Ga0213876_10008178 | 3300021384 | Bacteria | 5664 |
| 66 | Ga0213876_10016634 | 3300021384 | Bacteria | 3887 |
| 67 | Ga0213875_10000259 | 3300021388 | Bacteria | 53341 |
| 68 | Ga0213875_10004025 | 3300021388 | Bacteria | 8182 |
| 69 | Ga0213875_10029164 | 3300021388 | Bacteria | 2617 |
| 70 | Ga0213875_10036099 | 3300021388 | Bacteria | 2330 |
| 71 | Ga0224712_10006296 | 3300022467 | Bacteria | 3374 |
| 72 | Ga0228598_1016565 | 3300024227 | Bacteria | 1455 |
| 73 | Ga0209130_1001376 | 3300025284 | Bacteria | 16385 |
| 74 | Ga0209025_1000152 | 3300025294 | Bacteria | 171558 |
| 75 | Ga0209758_1005646 | 3300025297 | Bacteria | 9479 |
| 76 | Ga0207426_1000333 | 3300025302 | Bacteria | 88786 |
| 77 | Ga0207692_10012139 | 3300025898 | Bacteria | 3691 |
| 78 | Ga0207680_10087829 | 3300025903 | Bacteria | 1970 |
| 79 | Ga0207684_10032154 | 3300025910 | Bacteria | 4462 |
| 80 | Ga0207707_10004935 | 3300025912 | Bacteria | 11731 |
| 81 | Ga0207707_10017586 | 3300025912 | Bacteria | 6235 |
| 82 | Ga0207695_10019809 | 3300025913 | Bacteria | 7733 |
| 83 | Ga0207695_10028474 | 3300025913 | Bacteria | 6195 |
| 84 | Ga0207695_10113567 | 3300025913 | Bacteria | 2685 |
| 85 | Ga0207695_10160716 | 3300025913 | Bacteria | 2178 |
| 86 | Ga0207695_10161957 | 3300025913 | Bacteria | 2168 |
| 87 | Ga0207693_10000447 | 3300025915 | Bacteria | 37791 |
| 88 | Ga0207693_10013002 | 3300025915 | Bacteria | 6716 |
| 89 | Ga0207663_10021954 | 3300025916 | Bacteria | 3641 |
| 90 | Ga0207663_10062021 | 3300025916 | Bacteria | 2375 |
| 91 | Ga0207652_10107420 | 3300025921 | Bacteria | 2472 |
| 92 | Ga0207652_10116790 | 3300025921 | Bacteria | 2371 |
| 93 | Ga0207646_10003818 | 3300025922 | Bacteria | 16740 |
| 94 | Ga0207694_10042248 | 3300025924 | Bacteria | 3516 |
| 95 | Ga0207650_10000033 | 3300025925 | Bacteria | 226809 |
| 96 | Ga0207664_10103606 | 3300025929 | Bacteria | 2355 |
| 97 | Ga0207644_10072262 | 3300025931 | Bacteria | 2526 |
| 98 | Ga0207665_10028561 | 3300025939 | Bacteria | 3685 |
| 99 | Ga0207667_10053359 | 3300025949 | Bacteria | 4254 |
| 100 | Ga0207667_10072747 | 3300025949 | Bacteria | 3573 |
| 101 | Ga0207667_10176882 | 3300025949 | Bacteria | 2192 |
| 102 | Ga0207712_10011622 | 3300025961 | Bacteria | 5612 |
| 103 | Ga0207668_10000426 | 3300025972 | Bacteria | 26589 |
| 104 | Ga0207641_10001887 | 3300026088 | Bacteria | 20119 |
| 105 | Ga0207676_10000068 | 3300026095 | Bacteria | 104705 |
| 106 | Ga0209813_10012422 | 3300027866 | Bacteria | 2251 |
| 107 | Ga0268266_10001644 | 3300028379 | Bacteria | 25899 |
| 108 | Ga0268266_10004139 | 3300028379 | Bacteria | 14009 |
| 109 | Ga0268265_10004547 | 3300028380 | Bacteria | 9593 |
| 110 | Ga0268264_10000032 | 3300028381 | Bacteria | 408337 |
| 111 | Ga0265328_10010856 | 3300031239 | Bacteria | 3658 |
| 112 | Ga0265331_10000288 | 3300031250 | Bacteria | 55408 |
| 113 | Ga0265327_10000297 | 3300031251 | Bacteria | 96213 |
| 114 | Ga0265327_10002218 | 3300031251 | Bacteria | 21185 |
| 115 | Ga0265327_10003819 | 3300031251 | Bacteria | 13924 |
| 116 | Ga0265327_10012871 | 3300031251 | Bacteria | 5604 |
| 117 | Ga0265314_10035209 | 3300031711 | Bacteria | 3651 |
| 118 | Ga0307410_10001386 | 3300031852 | Bacteria | 10897 |
| 119 | Ga0307409_100052673 | 3300031995 | Bacteria | 3122 |
| 120 | Ga0307411_10051518 | 3300032005 | Bacteria | 2686 |
| 121 | Ga0373934_0005186 | 3300035086 | Bacteria | 4823 |
| 122 | Ga0373953_0027980 | 3300035117 | Bacteria | 2170 |
| 123 | Ga0373954_0042303 | 3300035118 | Bacteria | 2124 |
| 124 | Ga0373931_0025691 | 3300035691 | Bacteria | 2992 |
| 125 | Ga0373937_0001845 | 3300036401 | Bacteria | 17802 |
| 126 | Ga0373937_0025077 | 3300036401 | Bacteria | 5383 |
| 127 | Ga0373937_0099997 | 3300036401 | Bacteria | 2690 |
| 128 | Ga0373925_0123996 | 3300037068 | Bacteria | 2008 |
| 129 | Ga0395905_0180622 | 3300037471 | Bacteria | 1981 |
| 130 | Ga0436364_0167149 | 3300037853 | Bacteria | 26449 |
| 131 | Ga0436364_1005511 | 3300037853 | Bacteria | 3112 |
| 132 | Ga0436364_1023374 | 3300037853 | Bacteria | 13152 |
| 133 | Ga0436364_1305152 | 3300037853 | Bacteria | 2753 |
| 134 | Ga0436364_1373616 | 3300037853 | Bacteria | 99108 |
| 135 | Ga0395901_0304377 | 3300038443 | Bacteria | 1652 |
| 136 | Ga0436365_0233405 | 3300039437 | Bacteria | 3737 |
| 137 | Ga0436365_0706376 | 3300039437 | Bacteria | 2357 |
| 138 | Ga0436365_0844223 | 3300039437 | Bacteria | 8678 |
| 139 | Ga0436365_1046226 | 3300039437 | Bacteria | 5978 |
| 140 | Ga0436360_0592131 | 3300039438 | Bacteria | 4192 |
| 141 | Ga0436361_0093163 | 3300039447 | Bacteria | 6204 |
| 142 | Ga0436363_1125952 | 3300039450 | Bacteria | 4281 |
| 143 | Ga0436362_0305055 | 3300039453 | Bacteria | 3894 |
| 144 | Ga0436362_1166567 | 3300039453 | Bacteria | 1688 |
| 145 | Ga0453684_0005256 | 3300044712 | Bacteria | 25882 |
| 146 | Ga0453684_0143625 | 3300044712 | Bacteria | 2846 |
| 147 | Ga0451576_0027329 | 3300045051 | Bacteria | 6130 |
| 148 | Ga0451576_0105390 | 3300045051 | Bacteria | 2933 |
| 149 | Ga0466967_0059556 | 3300045976 | Bacteria | 3381 |
| 150 | Ga0495592_0108361 | 3300046454 | Bacteria | 1969 |
| 151 | Ga0495610_0016780 | 3300046512 | Bacteria | 4201 |
| 152 | Ga0495643_0025009 | 3300046522 | Bacteria | 3382 |
| 153 | Ga0495640_0099273 | 3300046533 | Bacteria | 1913 |
| 154 | Ga0495586_0070791 | 3300046535 | Bacteria | 1905 |
| 155 | Ga0495667_0067113 | 3300046559 | Bacteria | 2344 |
| 156 | Ga0495635_0049653 | 3300046663 | Bacteria | 2892 |
| 157 | Ga0495599_0065507 | 3300046678 | Bacteria | 2270 |
| 158 | Ga0495600_0089269 | 3300046809 | Bacteria | 2011 |
| 159 | Ga0495680_0077139 | 3300047322 | Bacteria | 2525 |
| 160 | Ga0496110_0071932 | 3300048913 | Bacteria | 3068 |
| 161 | Ga0496112_0001171 | 3300048915 | Bacteria | 19647 |
| 162 | Ga0496125_0063099 | 3300048928 | Bacteria | 2957 |
| 163 | Ga0501034_0041723 | 3300049571 | Bacteria | 4643 |
| 164 | Ga0501034_0240017 | 3300049571 | Bacteria | 1759 |
| 165 | Ga0501038_0000042 | 3300049574 | Bacteria | 115753 |
| 166 | Ga0501039_0137913 | 3300049575 | Bacteria | 1916 |
| 167 | Ga0501072_0122689 | 3300049588 | Bacteria | 2070 |
| 168 | Ga0501076_0047072 | 3300049592 | Bacteria | 3409 |
| 169 | Ga0501079_0107576 | 3300049741 | Bacteria | 2165 |
| 170 | Ga0501083_0026346 | 3300049744 | Bacteria | 4018 |
| 171 | nmdc:mga04h51_54763_c1 | 3300050495 | Bacteria | 1349 |
| 172 | nmdc:mga0qj67_111543_c1 | 3300050509 | Bacteria | 2208 |
| 173 | nmdc:mga0rr50_49162_c1 | 3300050513 | Bacteria | 3121 |
| 174 | nmdc:mga08x19_8695_c1 | 3300050514 | Bacteria | 6055 |
| 175 | Ga0495601_0007709 | 3300053077 | Bacteria | 6326 |
| 176 | Ga0500635_0000051 | 3300053080 | Bacteria | 76510 |
| 177 | Ga0495595_0019260 | 3300053084 | Bacteria | 2960 |
| 178 | Ga0495619_0056301 | 3300053085 | Bacteria | 2606 |
| 179 | Ga0500647_0054928 | 3300053091 | Bacteria | 1916 |
| 180 | Ga0500569_036069 | 3300053109 | Bacteria | 1421 |
| 181 | Ga0500595_002338 | 3300053119 | Bacteria | 9480 |
| 182 | Ga0500595_005339 | 3300053119 | Bacteria | 5623 |
| 183 | Ga0500608_000739 | 3300053122 | Bacteria | 11934 |
| 184 | Ga0500559_0080087 | 3300053136 | Bacteria | 1483 |
| 185 | Ga0500590_004837 | 3300053148 | Bacteria | 6422 |
| 186 | Ga0500636_0034018 | 3300053177 | Bacteria | 3016 |
| 187 | Ga0500625_042381 | 3300053729 | Bacteria | 2136 |
| 188 | Ga0501082_0109663 | 3300060353 | Bacteria | 2389 |
| 189 | 2523103042 | 2522572158 | Bacteria | 6514390 |
| 190 | 2524611042 | 2524023250 | Bacteria | 5457705 |
| 191 | 2644001137 | 2643221598 | Bacteria | 4578346 |
| 192 | 2644087547 | 2643221614 | Bacteria | 4260023 |
| 193 | 2644344409 | 2643221661 | Bacteria | 4267604 |
| 194 | 2644366906 | 2643221666 | Bacteria | 4265935 |
| 195 | 2821448312 | 2821443989 | Bacteria | 7658172 |
| 196 | 2842335502 | 2842333319 | Bacteria | 8899485 |
| 197 | 2844534981 | 2844533157 | Bacteria | 7517899 |
| 198 | 2899279228 | 2899275550 | Bacteria | 3958688 |
| 199 | 2929201036 | 2929199973 | Bacteria | 7260745 |
| 200 | 8055911630 | 8055909800 | Bacteria | 7278581 |
| 201 | 8057133538 | 8057132660 | Bacteria | 4061191 |
| 202 | Ga0070717_10092521 | |||
| 203 | Ga0070670_100000004 | |||
| 204 | Ga0070680_100006198 | |||
| 205 | Ga0070668_100001643 | |||
| 206 | Ga0070671_100015083 | |||
| 207 | Ga0070671_100015904 | |||
| 208 | Ga0070667_100000105 | |||
| 209 | Ga0070709_10018745 | |||
| 210 | Ga0070714_100004679 | |||
| 211 | Ga0070714_100121226 | |||
| 212 | Ga0070714_100136166 | |||
| 213 | Ga0070714_100191348 | |||
| 214 | Ga0070713_100011724 | |||
| 215 | Ga0070711_100003640 | |||
| 216 | Ga0070705_100022635 | |||
| 217 | Ga0070694_100002699 | |||
| 218 | Ga0070681_10005513 | |||
| 219 | Ga0070681_10084372 | |||
| 220 | Ga0070681_10176363 | |||
| 221 | Ga0070707_100201296 | |||
| 222 | Ga0070698_100001308 | |||
| 223 | Ga0070698_100196683 | |||
| 224 | Ga0070698_100336746 | |||
| 225 | Ga0070699_100086213 | |||
| 226 | Ga0070679_100144005 | |||
| 227 | Ga0070697_100063787 | |||
| 228 | Ga0070695_100032086 | |||
| 229 | Ga0070665_100001194 | |||
| 230 | Ga0070665_100007729 | |||
| 231 | Ga0068855_100063516 | |||
| 232 | Ga0068863_100000560 | |||
| 233 | Ga0068860_100000077 | |||
| 234 | Ga0081540_1001876 | |||
| 235 | Ga0070717_10001590 | |||
| 236 | Ga0070717_10002039 | |||
| 237 | Ga0070717_10112746 | |||
| 238 | Ga0075368_10004990 | |||
| 239 | Ga0070715_10046221 | |||
| 240 | Ga0070712_100008924 | |||
| 241 | Ga0070712_100010834 | |||
| 242 | Ga0075430_100121492 | |||
| 243 | Ga0075435_100070328 | |||
| 244 | Ga0099795_10006614 | |||
| 245 | Ga0099795_10032647 | |||
| 246 | Ga0099795_10035811 | |||
| 247 | Ga0105240_10089085 | |||
| 248 | Ga0105240_10093917 | |||
| 249 | Ga0105240_10118236 | |||
| 250 | Ga0105240_10159003 | |||
| 251 | Ga0105245_10002744 | |||
| 252 | Ga0105248_10061284 | |||
| 253 | Ga0105249_10021533 | |||
| 254 | Ga0099796_10023450 | |||
| 255 | Ga0157370_10004314 | |||
| 256 | Ga0157370_10103736 | |||
| 257 | Ga0157369_10006736 | |||
| 258 | Ga0157369_10092375 | |||
| 259 | Ga0163162_10364769 | |||
| 260 | Ga0163163_10193670 | |||
| 261 | Ga0206349_1426686 | |||
| 262 | Ga0206355_1651589 | |||
| 263 | Ga0206354_10229447 | |||
| 264 | Ga0213873_10002371 | |||
| 265 | Ga0213874_10015916 | |||
| 266 | Ga0213876_10008178 | |||
| 267 | Ga0213876_10016634 | |||
| 268 | Ga0213875_10000259 | |||
| 269 | Ga0213875_10004025 | |||
| 270 | Ga0213875_10029164 | |||
| 271 | Ga0213875_10036099 | |||
| 272 | Ga0224712_10006296 | |||
| 273 | Ga0228598_1016565 | |||
| 274 | Ga0209130_1001376 | |||
| 275 | Ga0209025_1000152 | |||
| 276 | Ga0209758_1005646 | |||
| 277 | Ga0207426_1000333 | |||
| 278 | Ga0207692_10012139 | |||
| 279 | Ga0207680_10087829 | |||
| 280 | Ga0207684_10032154 | |||
| 281 | Ga0207707_10004935 | |||
| 282 | Ga0207707_10017586 | |||
| 283 | Ga0207695_10019809 | |||
| 284 | Ga0207695_10028474 | |||
| 285 | Ga0207695_10113567 | |||
| 286 | Ga0207695_10160716 | |||
| 287 | Ga0207695_10161957 | |||
| 288 | Ga0207693_10000447 | |||
| 289 | Ga0207693_10013002 | |||
| 290 | Ga0207663_10021954 | |||
| 291 | Ga0207663_10062021 | |||
| 292 | Ga0207652_10107420 | |||
| 293 | Ga0207652_10116790 | |||
| 294 | Ga0207646_10003818 | |||
| 295 | Ga0207694_10042248 | |||
| 296 | Ga0207650_10000033 | |||
| 297 | Ga0207664_10103606 | |||
| 298 | Ga0207644_10072262 | |||
| 299 | Ga0207665_10028561 | |||
| 300 | Ga0207667_10053359 | |||
| 301 | Ga0207667_10072747 | |||
| 302 | Ga0207667_10176882 | |||
| 303 | Ga0207712_10011622 | |||
| 304 | Ga0207668_10000426 | |||
| 305 | Ga0207641_10001887 | |||
| 306 | Ga0207676_10000068 | |||
| 307 | Ga0209813_10012422 | |||
| 308 | Ga0268266_10001644 | |||
| 309 | Ga0268266_10004139 | |||
| 310 | Ga0268265_10004547 | |||
| 311 | Ga0268264_10000032 | |||
| 312 | Ga0265328_10010856 | |||
| 313 | Ga0265331_10000288 | |||
| 314 | Ga0265327_10000297 | |||
| 315 | Ga0265327_10002218 | |||
| 316 | Ga0265327_10003819 | |||
| 317 | Ga0265327_10012871 | |||
| 318 | Ga0265314_10035209 | |||
| 319 | Ga0307410_10001386 | |||
| 320 | Ga0307409_100052673 | |||
| 321 | Ga0307411_10051518 | |||
| 322 | Ga0373934_0005186 | |||
| 323 | Ga0373953_0027980 | |||
| 324 | Ga0373954_0042303 | |||
| 325 | Ga0373931_0025691 | |||
| 326 | Ga0373937_0001845 | |||
| 327 | Ga0373937_0025077 | |||
| 328 | Ga0373937_0099997 | |||
| 329 | Ga0373925_0123996 | |||
| 330 | Ga0395905_0180622 | |||
| 331 | Ga0436364_0167149 | |||
| 332 | Ga0436364_1005511 | |||
| 333 | Ga0436364_1023374 | |||
| 334 | Ga0436364_1305152 | |||
| 335 | Ga0436364_1373616 | |||
| 336 | Ga0395901_0304377 | |||
| 337 | Ga0436365_0233405 | |||
| 338 | Ga0436365_0706376 | |||
| 339 | Ga0436365_0844223 | |||
| 340 | Ga0436365_1046226 | |||
| 341 | Ga0436360_0592131 | |||
| 342 | Ga0436361_0093163 | |||
| 343 | Ga0436363_1125952 | |||
| 344 | Ga0436362_0305055 | |||
| 345 | Ga0436362_1166567 | |||
| 346 | Ga0453684_0005256 | |||
| 347 | Ga0453684_0143625 | |||
| 348 | Ga0451576_0027329 | |||
| 349 | Ga0451576_0105390 | |||
| 350 | Ga0466967_0059556 | |||
| 351 | Ga0495592_0108361 | |||
| 352 | Ga0495610_0016780 | |||
| 353 | Ga0495643_0025009 | |||
| 354 | Ga0495640_0099273 | |||
| 355 | Ga0495586_0070791 | |||
| 356 | Ga0495667_0067113 | |||
| 357 | Ga0495635_0049653 | |||
| 358 | Ga0495599_0065507 | |||
| 359 | Ga0495600_0089269 | |||
| 360 | Ga0495680_0077139 | |||
| 361 | Ga0496110_0071932 | |||
| 362 | Ga0496112_0001171 | |||
| 363 | Ga0496125_0063099 | |||
| 364 | Ga0501034_0041723 | |||
| 365 | Ga0501034_0240017 | |||
| 366 | Ga0501038_0000042 | |||
| 367 | Ga0501039_0137913 | |||
| 368 | Ga0501072_0122689 | |||
| 369 | Ga0501076_0047072 | |||
| 370 | Ga0501079_0107576 | |||
| 371 | Ga0501083_0026346 | |||
| 372 | nmdc:mga04h51_54763_c1 | |||
| 373 | nmdc:mga0qj67_111543_c1 | |||
| 374 | nmdc:mga0rr50_49162_c1 | |||
| 375 | nmdc:mga08x19_8695_c1 | |||
| 376 | Ga0495601_0007709 | |||
| 377 | Ga0500635_0000051 | |||
| 378 | Ga0495595_0019260 | |||
| 379 | Ga0495619_0056301 | |||
| 380 | Ga0500647_0054928 | |||
| 381 | Ga0500569_036069 | |||
| 382 | Ga0500595_002338 | |||
| 383 | Ga0500595_005339 | |||
| 384 | Ga0500608_000739 | |||
| 385 | Ga0500559_0080087 | |||
| 386 | Ga0500590_004837 | |||
| 387 | Ga0500636_0034018 | |||
| 388 | Ga0500625_042381 | |||
| 389 | Ga0501082_0109663 | |||
| 390 | 2523103042 | |||
| 391 | 2524611042 | |||
| 392 | 2644001137 | |||
| 393 | 2644087547 | |||
| 394 | 2644344409 | |||
| 395 | 2644366906 | |||
| 396 | 2821448312 | |||
| 397 | 2842335502 | |||
| 398 | 2844534981 | |||
| 399 | 2899279228 | |||
| 400 | 2929201036 | |||
| 401 | 8055911630 | |||
| 402 | 8057133538 |
Family Sequences
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1sqg-assembly1.cif.gz_A | the crystal structure of the e. coli fmu apoenzyme at 1.65 a resolution | 0.893 | 26 | 438 |
| 2frx-assembly2.cif.gz_B | crystal structure of yebu, a m5c rna methyltransferase from e.coli | 0.8718 | 158 | 441 |
| 1sqg-assembly1.cif.gz_A | the crystal structure of the e. coli fmu apoenzyme at 1.65 a resolution | 0.8688 | 26 | 438 |
| 3m6w-assembly1.cif.gz_A | multi-site-specific 16s rrna methyltransferase rsmf from thermus thermophilus in space group p21212 in complex with s-adenosyl-l-methionine | 0.8641 | 158 | 440 |
| 4m36-assembly1.cif.gz_A | crystal structure of trypanosoma brucei protein arginine methyltransferase 7 | 0.8634 | 242 | 326 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_Q8VYC4_72_208_1.10.940.10 | Mainly Alpha;Orthogonal Bundle;N-utilizing Substance Protein B Homolog; Chain A;NusB-like | 0.9292 | 56 | 145 | 1.10.940.10 |
| 1sqfA04 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.924 | 236 | 441 | 3.40.50.150 |
| af_A0A1D6EFY7_537_616_3.40.50.150 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9196 | 249 | 307 | 3.40.50.150 |
| 1sqfA04 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9195 | 236 | 441 | 3.40.50.150 |
| 2yxlA04 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 | 0.9135 | 236 | 440 | 3.40.50.150 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A258BIT4-F1-model_v4 | rRNA methyltransferase | 0.9803 | 160 | 441 |
GO:0001510
GO:0003723 GO:0008173 |
| AF-A0A2W4SPW8-F1-model_v4 | rRNA methyltransferase | 0.9733 | 278 | 440 |
GO:0001510
GO:0003723 GO:0008173 |
| AF-A0A5C8T3U1-F1-model_v4 | RsmB/NOP family class I SAM-dependent RNA methyltransferase | 0.9685 | 169 | 441 |
GO:0001510
GO:0003723 GO:0008173 |
| AF-A0A523FQI8-F1-model_v4 | Methyltransferase domain-containing protein | 0.9673 | 56 | 441 |
GO:0001510
GO:0003723 GO:0006355 GO:0008173 |
| AF-A0A258BIT4-F1-model_v4 | rRNA methyltransferase | 0.9635 | 160 | 441 |
GO:0001510
GO:0003723 GO:0008173 |