F307299

General Info

Members Datasets Scaffolds Average Seq Length
200 142 200 148

Family's Representative Sequence

Representative Sequence 3300026075|Ga0207708_10370895|Ga0207708_103708952
Length 163
Sequence MTAPHEPPGPGTPPEAPAGTLIERITAAKASLDYQGMIDLVPYARFLGLTAAMQGEELITTMRFGQHLIGNRSLPALHGGTLGALLESAAIYELLWRSETIVLPKTITLTIDFLRPGAPVDTHARGVVTRQGRRVTNVRMEAWQADRSAPVATAHAIFLVMRG

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
26 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
27 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
31 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
33 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
34 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
35 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
38 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
55 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
56 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
57 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
58 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
59 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
60 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
61 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
62 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
63 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
64 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
65 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
66 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
67 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
68 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
69 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
70 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
71 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
72 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
80 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
81 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
85 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
86 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
87 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
88 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
89 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
90 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
91 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
92 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
93 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
94 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
95 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
96 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
99 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
100 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
101 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
102 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
103 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
104 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
105 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
106 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
107 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
108 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
109 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
110 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
111 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
112 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
113 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
114 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
115 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
116 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
117 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
118 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
121 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
122 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
123 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
124 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
125 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
126 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
127 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
128 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
129 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
130 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
131 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
132 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
133 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
134 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
135 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
136 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
137 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
138 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
139 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
140 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
141 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
142 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12
Nodule 0
Rhizoplane 2.5
Rhizosphere 75
Stem 0
Stem Tuber 0
Unclassified 10.5

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_11784979 3300005327 Bacteria 532
2 Ga0070683_100446871 3300005329 Bacteria 1233
3 Ga0070683_100524598 3300005329 Bacteria 1132
4 Ga0070690_100039184 3300005330 Bacteria 2993
5 Ga0070670_100434206 3300005331 Bacteria 1162
6 Ga0068869_100013954 3300005334 Bacteria 5359
7 Ga0068869_100659633 3300005334 Bacteria 889
8 Ga0070689_100006519 3300005340 Bacteria 8093
9 Ga0070689_100054308 3300005340 Bacteria 3101
10 Ga0070689_101478234 3300005340 Bacteria 615
11 Ga0070687_100464210 3300005343 Bacteria 845
12 Ga0070688_100078014 3300005365 Bacteria 2136
13 Ga0070688_100625070 3300005365 Bacteria 827
14 Ga0070701_10411889 3300005438 Bacteria 859
15 Ga0070705_100612359 3300005440 Bacteria 844
16 Ga0070700_101106531 3300005441 Unclassified 657
17 Ga0070694_100576897 3300005444 Bacteria 903
18 Ga0070708_100218019 3300005445 Bacteria 1789
19 Ga0070678_100022825 3300005456 Bacteria 4157
20 Ga0070678_100266935 3300005456 Bacteria 1442
21 Ga0070706_100029232 3300005467 Bacteria 5078
22 Ga0070698_100002422 3300005471 Bacteria 20552
23 Ga0070698_100253531 3300005471 Bacteria 1692
24 Ga0070698_100962758 3300005471 Bacteria 800
25 Ga0070684_100845958 3300005535 Bacteria 856
26 Ga0070665_100057841 3300005548 Bacteria 3887
27 Ga0070704_100044395 3300005549 Bacteria 3088
28 Ga0070702_100616374 3300005615 Bacteria 816
29 Ga0068859_100678010 3300005617 Bacteria 1122
30 Ga0068859_101778449 3300005617 Unclassified 681
31 Ga0068861_100051700 3300005719 Bacteria 3120
32 Ga0068863_100368702 3300005841 Bacteria 1401
33 Ga0068862_101594386 3300005844 Bacteria 660
34 Ga0081538_10008988 3300005981 Bacteria 8393
35 Ga0081538_10119163 3300005981 Bacteria 1273
36 Ga0070717_10014382 3300006028 Bacteria 6088
37 Ga0070717_10071226 3300006028 Bacteria 2899
38 Ga0097621_101040037 3300006237 Bacteria 767
39 Ga0068871_101134585 3300006358 Bacteria 732
40 Ga0075430_100668871 3300006846 Bacteria 856
41 Ga0068865_100027991 3300006881 Bacteria 3729
42 Ga0097620_100677989 3300006931 Bacteria 1122
43 Ga0097620_101778561 3300006931 Unclassified 681
44 Ga0075435_100762397 3300007076 Bacteria 842
45 Ga0075435_100849736 3300007076 Bacteria 795
46 Ga0105245_12839654 3300009098 Bacteria 537
47 Ga0114129_10944721 3300009147 Unclassified 1089
48 Ga0105242_11592497 3300009176 Bacteria 687
49 Ga0105242_11623991 3300009176 Bacteria 681
50 Ga0105249_10034834 3300009553 Bacteria 4564
51 Ga0157374_10007874 3300013296 Bacteria 9097
52 Ga0157378_10763772 3300013297 Bacteria 990
53 Ga0157378_12587367 3300013297 Unclassified 560
54 Ga0157376_10746249 3300014969 Bacteria 988
55 Ga0207662_10746082 3300025918 Unclassified 688
56 Ga0207650_10572041 3300025925 Bacteria 948
57 Ga0207670_10016766 3300025936 Bacteria 4412
58 Ga0207670_10027440 3300025936 Bacteria 3599
59 Ga0207670_10457493 3300025936 Bacteria 1030
60 Ga0207704_10016348 3300025938 Bacteria 3811
61 Ga0207689_10019339 3300025942 Bacteria 5741
62 Ga0207689_10063883 3300025942 Bacteria 3029
63 Ga0207712_10033353 3300025961 Bacteria 3480
64 Ga0207668_10368782 3300025972 Bacteria 1205
65 Ga0207708_10370895 3300026075 Bacteria 1178
66 Ga0207708_10512236 3300026075 Bacteria 1007
67 Ga0207641_10682223 3300026088 Bacteria 1011
68 Ga0207683_10006501 3300026121 Bacteria 10001
69 Ga0207683_10623420 3300026121 Bacteria 999
70 Ga0207428_10026503 3300027907 Bacteria 4839
71 Ga0268266_10006561 3300028379 Bacteria 10637
72 Ga0268265_10591363 3300028380 Bacteria 1059
73 Ga0268265_12177417 3300028380 Bacteria 561
74 Ga0268264_10665258 3300028381 Archaea 1032
75 Ga0265319_1095942 3300028563 Bacteria 934
76 Ga0307517_10068143 3300028786 Bacteria 3246
77 Ga0307515_10011049 3300028794 Bacteria 17194
78 Ga0265327_10000049 3300031251 Bacteria 268046
79 Ga0307513_10004662 3300031456 Bacteria 18240
80 Ga0307509_10001844 3300031507 Bacteria 35043
81 Ga0307509_10045787 3300031507 Bacteria 4714
82 Ga0307509_10054203 3300031507 Bacteria 4271
83 Ga0307509_10124458 3300031507 Bacteria 2548
84 Ga0307509_10482113 3300031507 Bacteria 928
85 Ga0307509_10491723 3300031507 Bacteria 913
86 Ga0307509_10534791 3300031507 Bacteria 852
87 Ga0265313_10143007 3300031595 Bacteria 1028
88 Ga0307508_10011967 3300031616 Bacteria 7938
89 Ga0307508_10389927 3300031616 Bacteria 984
90 Ga0307516_10008092 3300031730 Bacteria 11944
91 Ga0307516_10141681 3300031730 Bacteria 2173
92 Ga0307405_10061477 3300031731 Bacteria 2374
93 Ga0307410_10864568 3300031852 Bacteria 773
94 Ga0307406_10004577 3300031901 Bacteria 7527
95 Ga0307415_100046929 3300032126 Bacteria 2905
96 Ga0307415_100671819 3300032126 Bacteria 931
97 Ga0373949_0000070 3300035090 Bacteria 37716
98 Ga0373936_0000060 3300035113 Bacteria 52820
99 Ga0373941_0010413 3300035115 Bacteria 2375
100 Ga0373956_0061588 3300035119 Bacteria 1700
101 Ga0373961_0000112 3300035241 Bacteria 42376
102 Ga0373937_0629169 3300036401 Bacteria 1018
103 Ga0395899_0027616 3300037312 Bacteria 4276
104 Ga0395900_0727587 3300037418 Bacteria 924
105 Ga0395900_0755100 3300037418 Bacteria 903
106 Ga0395905_0049834 3300037471 Bacteria 3925
107 Ga0395905_0583714 3300037471 Bacteria 1019
108 Ga0436364_0225611 3300037853 Bacteria 709
109 Ga0395901_0017639 3300038443 Bacteria 7289
110 Ga0395901_0108442 3300038443 Bacteria 2915
111 Ga0436365_0052226 3300039437 Bacteria 6950
112 Ga0436365_1192725 3300039437 Bacteria 763
113 Ga0436365_1913437 3300039437 Bacteria 846
114 Ga0436363_0096547 3300039450 Bacteria 760
115 Ga0436363_1557109 3300039450 Bacteria 697
116 Ga0451797_1163925 3300041453 Bacteria 759
117 Ga0451807_1673685 3300041486 Bacteria 689
118 Ga0451577_0186444 3300042876 Bacteria 1871
119 Ga0453684_0271510 3300044712 Bacteria 1938
120 Ga0451576_0406361 3300045051 Bacteria 1428
121 Ga0495592_0771518 3300046454 Bacteria 573
122 Ga0495621_0103468 3300046539 Bacteria 1086
123 Ga0495621_0391008 3300046539 Bacteria 589
124 Ga0495622_0140530 3300046557 Bacteria 1096
125 Ga0495649_0103353 3300046694 Unclassified 1513
126 Ga0495649_0302410 3300046694 Bacteria 814
127 Ga0495636_0010174 3300047318 Bacteria 3710
128 Ga0495636_0039894 3300047318 Bacteria 1945
129 Ga0495686_0021401 3300047472 Bacteria 4295
130 Ga0495686_0038945 3300047472 Bacteria 3039
131 Ga0495615_0003321 3300048090 Bacteria 2679
132 Ga0495615_0021095 3300048090 Bacteria 1466
133 Ga0496100_0041216 3300048903 Bacteria 2942
134 Ga0496104_0677731 3300048907 Bacteria 939
135 Ga0496109_0597126 3300048912 Bacteria 1040
136 Ga0496124_0585410 3300048927 Bacteria 729
137 Ga0501034_0139997 3300049571 Unclassified 2400
138 Ga0501034_0184077 3300049571 Bacteria 2053
139 Ga0501043_0485405 3300049579 Bacteria 925
140 Ga0501047_0050536 3300049581 Bacteria 4015
141 Ga0501047_0916841 3300049581 Bacteria 689
142 Ga0501070_0013625 3300049586 Bacteria 6852
143 Ga0501070_0031171 3300049586 Bacteria 4466
144 Ga0501070_0076978 3300049586 Bacteria 2761
145 Ga0501202_005907 3300049652 Bacteria 2177
146 Ga0501216_022271 3300049660 Unclassified 1119
147 Ga0501217_007518 3300049661 Bacteria 2338
148 Ga0501223_029825 3300049663 Bacteria 1061
149 Ga0501227_001078 3300049665 Bacteria 6065
150 Ga0501227_001617 3300049665 Bacteria 5012
151 Ga0501230_025803 3300049667 Unclassified 1062
152 Ga0501233_007354 3300049668 Bacteria 2093
153 Ga0501235_015480 3300049669 Bacteria 1681
154 Ga0501225_0016385 3300049705 Bacteria 2060
155 Ga0501079_0552377 3300049741 Bacteria 906
156 Ga0501080_0155690 3300049742 Bacteria 2111
157 Ga0501080_0669931 3300049742 Bacteria 917
158 Ga0501081_0098894 3300049743 Bacteria 2061
159 Ga0501083_0666648 3300049744 Unclassified 676
160 Ga0501035_0000097 3300049822 Bacteria 110207
161 Ga0501035_0192211 3300049822 Bacteria 1755
162 Ga0501044_0005109 3300049823 Bacteria 14635
163 Ga0501044_0843524 3300049823 Unclassified 793
164 nmdc:mga03683_262825_c1 3300050489 Unclassified 803
165 nmdc:mga05p37_1154336_c1 3300050507 Bacteria 805
166 nmdc:mga09592_34297_c1 3300050508 Bacteria 4242
167 nmdc:mga09592_60494_c1 3300050508 Bacteria 3202
168 nmdc:mga0qj67_1127221_c1 3300050509 Bacteria 612
169 nmdc:mga0qj67_351898_c1 3300050509 Bacteria 1191
170 nmdc:mga06r32_790078_c1 3300050510 Bacteria 910
171 nmdc:mga08y16_19029_c1 3300050511 Bacteria 7233
172 nmdc:mga0n895_363530_c1 3300050512 Bacteria 1465
173 nmdc:mga0rr50_1803617_c1 3300050513 Bacteria 515
174 nmdc:mga0rr50_880769_c1 3300050513 Bacteria 763
175 nmdc:mga0rr50_958603_c1 3300050513 Bacteria 729
176 nmdc:mga0a205_872252_c1 3300050515 Bacteria 747
177 Ga0500635_0008009 3300053080 Bacteria 2883
178 Ga0500646_0128212 3300053090 Bacteria 822
179 Ga0500583_0324097 3300053092 Bacteria 750
180 Ga0500566_0001651 3300053094 Bacteria 13090
181 Ga0500566_0005258 3300053094 Bacteria 7705
182 Ga0500566_0037031 3300053094 Bacteria 2828
183 Ga0500640_003119 3300053095 Bacteria 5685
184 Ga0500554_004205 3300053102 Bacteria 3030
185 Ga0500595_000225 3300053119 Bacteria 38629
186 Ga0500597_005028 3300053120 Bacteria 4200
187 Ga0500607_201590 3300053121 Bacteria 854
188 Ga0500614_000303 3300053123 Bacteria 12701
189 Ga0500642_0158932 3300053130 Bacteria 1060
190 Ga0500559_0013889 3300053136 Bacteria 3406
191 Ga0500559_0134107 3300053136 Bacteria 1157
192 Ga0500559_0310672 3300053136 Bacteria 740
193 Ga0500568_0032018 3300053139 Bacteria 2164
194 Ga0500585_123752 3300053144 Bacteria 920
195 Ga0500585_146839 3300053144 Bacteria 826
196 Ga0500603_044403 3300053150 Bacteria 1196
197 Ga0500619_066878 3300053154 Bacteria 1190
198 Ga0500637_0287130 3300053178 Bacteria 903
199 Ga0500601_001287 3300053737 Bacteria 2784
200 Ga0501084_1220000 3300054114 Unclassified 631

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300039437 Ga0436365_0052226 Ga0436365_0052226_6444_6902 136
2 3300039450 Ga0436363_1557109 Ga0436363_1557109_68_526 136
3 3300031616 Ga0307508_10389927 Ga0307508_103899272 139
4 3300048927 Ga0496124_0585410 Ga0496124_0585410_261_704 140
5 3300006846 Ga0075430_100668871 Ga0075430_1006688712 143
6 3300009147 Ga0114129_10944721 Ga0114129_109447212 143
7 3300037853 Ga0436364_0225611 Ga0436364_0225611_55_486 143
8 3300050507 nmdc:mga05p37_1154336_c1 nmdc:mga05p37_1154336_c1_310_744 143
9 3300050508 nmdc:mga09592_60494_c1 nmdc:mga09592_60494_c1_2468_2899 143
10 3300050509 nmdc:mga0qj67_1127221_c1 nmdc:mga0qj67_1127221_c1_79_513 143
11 3300050508 nmdc:mga09592_34297_c1 nmdc:mga09592_34297_c1_2700_3134 144
12 3300005329 Ga0070683_100524598 Ga0070683_1005245982 145
13 3300005330 Ga0070690_100039184 Ga0070690_1000391843 145
14 3300005331 Ga0070670_100434206 Ga0070670_1004342062 145
15 3300005334 Ga0068869_100659633 Ga0068869_1006596332 145
16 3300005340 Ga0070689_100054308 Ga0070689_1000543085 145
17 3300005340 Ga0070689_101478234 Ga0070689_1014782341 145
18 3300005365 Ga0070688_100078014 Ga0070688_1000780143 145
19 3300005365 Ga0070688_100625070 Ga0070688_1006250701 145
20 3300005440 Ga0070705_100612359 Ga0070705_1006123591 145
21 3300005441 Ga0070700_101106531 Ga0070700_1011065311 145
22 3300005444 Ga0070694_100576897 Ga0070694_1005768972 145
23 3300005445 Ga0070708_100218019 Ga0070708_1002180192 145
24 3300005456 Ga0070678_100022825 Ga0070678_1000228254 145
25 3300005456 Ga0070678_100266935 Ga0070678_1002669352 145
26 3300005467 Ga0070706_100029232 Ga0070706_1000292325 145
27 3300005471 Ga0070698_100002422 Ga0070698_10000242217 145
28 3300005471 Ga0070698_100253531 Ga0070698_1002535312 145
29 3300005548 Ga0070665_100057841 Ga0070665_1000578415 145
30 3300005549 Ga0070704_100044395 Ga0070704_1000443952 145
31 3300005615 Ga0070702_100616374 Ga0070702_1006163742 145
32 3300005617 Ga0068859_100678010 Ga0068859_1006780102 145
33 3300005719 Ga0068861_100051700 Ga0068861_1000517004 145
34 3300006237 Ga0097621_101040037 Ga0097621_1010400372 145
35 3300006358 Ga0068871_101134585 Ga0068871_1011345852 145
36 3300006881 Ga0068865_100027991 Ga0068865_1000279913 145
37 3300006931 Ga0097620_100677989 Ga0097620_1006779892 145
38 3300007076 Ga0075435_100762397 Ga0075435_1007623972 145
39 3300007076 Ga0075435_100849736 Ga0075435_1008497362 145
40 3300009098 Ga0105245_12839654 Ga0105245_128396541 145
41 3300009176 Ga0105242_11592497 Ga0105242_115924971 145
42 3300009176 Ga0105242_11623991 Ga0105242_116239912 145
43 3300009553 Ga0105249_10034834 Ga0105249_100348342 145
44 3300013296 Ga0157374_10007874 Ga0157374_100078744 145
45 3300013297 Ga0157378_10763772 Ga0157378_107637721 145
46 3300014969 Ga0157376_10746249 Ga0157376_107462492 145
47 3300025925 Ga0207650_10572041 Ga0207650_105720412 145
48 3300025936 Ga0207670_10027440 Ga0207670_100274403 145
49 3300025936 Ga0207670_10457493 Ga0207670_104574932 145
50 3300025938 Ga0207704_10016348 Ga0207704_100163483 145
51 3300025942 Ga0207689_10063883 Ga0207689_100638833 145
52 3300025961 Ga0207712_10033353 Ga0207712_100333532 145
53 3300026075 Ga0207708_10512236 Ga0207708_105122361 145
54 3300026088 Ga0207641_10682223 Ga0207641_106822232 145
55 3300026121 Ga0207683_10006501 Ga0207683_1000650111 145
56 3300026121 Ga0207683_10623420 Ga0207683_106234202 145
57 3300027907 Ga0207428_10026503 Ga0207428_100265032 145
58 3300028379 Ga0268266_10006561 Ga0268266_1000656110 145
59 3300028380 Ga0268265_10591363 Ga0268265_105913631 145
60 3300028381 Ga0268264_10665258 Ga0268264_106652582 145
61 3300028563 Ga0265319_1095942 Ga0265319_10959422 145
62 3300028794 Ga0307515_10011049 Ga0307515_100110499 145
63 3300031251 Ga0265327_10000049 Ga0265327_10000049176 145
64 3300031507 Ga0307509_10001844 Ga0307509_100018448 145
65 3300031507 Ga0307509_10045787 Ga0307509_100457876 145
66 3300031507 Ga0307509_10054203 Ga0307509_100542035 145
67 3300031595 Ga0265313_10143007 Ga0265313_101430072 145
68 3300031730 Ga0307516_10008092 Ga0307516_100080927 145
69 3300032126 Ga0307415_100046929 Ga0307415_1000469294 145
70 3300035090 Ga0373949_0000070 Ga0373949_0000070_8210_8647 145
71 3300035241 Ga0373961_0000112 Ga0373961_0000112_17902_18339 145
72 3300036401 Ga0373937_0629169 Ga0373937_0629169_229_687 145
73 3300037312 Ga0395899_0027616 Ga0395899_0027616_1910_2350 145
74 3300037418 Ga0395900_0727587 Ga0395900_0727587_226_666 145
75 3300037418 Ga0395900_0755100 Ga0395900_0755100_376_816 145
76 3300037471 Ga0395905_0049834 Ga0395905_0049834_3367_3807 145
77 3300037471 Ga0395905_0583714 Ga0395905_0583714_421_861 145
78 3300038443 Ga0395901_0017639 Ga0395901_0017639_3709_4149 145
79 3300038443 Ga0395901_0108442 Ga0395901_0108442_49_489 145
80 3300039437 Ga0436365_1192725 Ga0436365_1192725_300_737 145
81 3300039437 Ga0436365_1913437 Ga0436365_1913437_86_523 145
82 3300039450 Ga0436363_0096547 Ga0436363_0096547_196_633 145
83 3300041453 Ga0451797_1163925 Ga0451797_1163925_97_540 145
84 3300041486 Ga0451807_1673685 Ga0451807_1673685_114_557 145
85 3300042876 Ga0451577_0186444 Ga0451577_0186444_531_974 145
86 3300044712 Ga0453684_0271510 Ga0453684_0271510_510_953 145
87 3300045051 Ga0451576_0406361 Ga0451576_0406361_315_758 145
88 3300046454 Ga0495592_0771518 Ga0495592_0771518_79_522 145
89 3300046557 Ga0495622_0140530 Ga0495622_0140530_389_826 145
90 3300046694 Ga0495649_0103353 Ga0495649_0103353_403_840 145
91 3300048907 Ga0496104_0677731 Ga0496104_0677731_231_674 145
92 3300049571 Ga0501034_0139997 Ga0501034_0139997_113_553 145
93 3300049571 Ga0501034_0184077 Ga0501034_0184077_1537_1974 145
94 3300049579 Ga0501043_0485405 Ga0501043_0485405_184_624 145
95 3300049581 Ga0501047_0050536 Ga0501047_0050536_1652_2092 145
96 3300049581 Ga0501047_0916841 Ga0501047_0916841_236_676 145
97 3300049586 Ga0501070_0031171 Ga0501070_0031171_1096_1533 145
98 3300049586 Ga0501070_0076978 Ga0501070_0076978_208_648 145
99 3300049652 Ga0501202_005907 Ga0501202_005907_1691_2131 145
100 3300049660 Ga0501216_022271 Ga0501216_022271_349_789 145
101 3300049661 Ga0501217_007518 Ga0501217_007518_1749_2189 145
102 3300049663 Ga0501223_029825 Ga0501223_029825_27_467 145
103 3300049665 Ga0501227_001078 Ga0501227_001078_4550_4990 145
104 3300049667 Ga0501230_025803 Ga0501230_025803_367_807 145
105 3300049668 Ga0501233_007354 Ga0501233_007354_1304_1744 145
106 3300049669 Ga0501235_015480 Ga0501235_015480_1037_1477 145
107 3300049705 Ga0501225_0016385 Ga0501225_0016385_275_715 145
108 3300049741 Ga0501079_0552377 Ga0501079_0552377_24_464 145
109 3300049742 Ga0501080_0669931 Ga0501080_0669931_83_523 145
110 3300049743 Ga0501081_0098894 Ga0501081_0098894_784_1221 145
111 3300049744 Ga0501083_0666648 Ga0501083_0666648_191_628 145
112 3300049822 Ga0501035_0192211 Ga0501035_0192211_482_922 145
113 3300049823 Ga0501044_0005109 Ga0501044_0005109_10585_11025 145
114 3300049823 Ga0501044_0843524 Ga0501044_0843524_153_593 145
115 3300050509 nmdc:mga0qj67_351898_c1 nmdc:mga0qj67_351898_c1_81_539 145
116 3300050510 nmdc:mga06r32_790078_c1 nmdc:mga06r32_790078_c1_148_585 145
117 3300050511 nmdc:mga08y16_19029_c1 nmdc:mga08y16_19029_c1_6226_6678 145
118 3300050512 nmdc:mga0n895_363530_c1 nmdc:mga0n895_363530_c1_862_1311 145
119 3300050513 nmdc:mga0rr50_1803617_c1 nmdc:mga0rr50_1803617_c1_30_467 145
120 3300050513 nmdc:mga0rr50_880769_c1 nmdc:mga0rr50_880769_c1_181_618 145
121 3300050513 nmdc:mga0rr50_958603_c1 nmdc:mga0rr50_958603_c1_156_605 145
122 3300050515 nmdc:mga0a205_872252_c1 nmdc:mga0a205_872252_c1_269_718 145
123 3300053080 Ga0500635_0008009 Ga0500635_0008009_105_542 145
124 3300053092 Ga0500583_0324097 Ga0500583_0324097_97_534 145
125 3300053094 Ga0500566_0001651 Ga0500566_0001651_11270_11707 145
126 3300053094 Ga0500566_0005258 Ga0500566_0005258_4077_4514 145
127 3300053095 Ga0500640_003119 Ga0500640_003119_3694_4131 145
128 3300053102 Ga0500554_004205 Ga0500554_004205_1292_1729 145
129 3300053119 Ga0500595_000225 Ga0500595_000225_18721_19158 145
130 3300053120 Ga0500597_005028 Ga0500597_005028_1063_1500 145
131 3300053121 Ga0500607_201590 Ga0500607_201590_19_456 145
132 3300053123 Ga0500614_000303 Ga0500614_000303_3415_3852 145
133 3300053130 Ga0500642_0158932 Ga0500642_0158932_591_1028 145
134 3300053136 Ga0500559_0013889 Ga0500559_0013889_1806_2243 145
135 3300053136 Ga0500559_0310672 Ga0500559_0310672_31_468 145
136 3300053139 Ga0500568_0032018 Ga0500568_0032018_1187_1630 145
137 3300053144 Ga0500585_123752 Ga0500585_123752_129_566 145
138 3300053144 Ga0500585_146839 Ga0500585_146839_334_771 145
139 3300053150 Ga0500603_044403 Ga0500603_044403_608_1045 145
140 3300053154 Ga0500619_066878 Ga0500619_066878_531_968 145
141 3300053178 Ga0500637_0287130 Ga0500637_0287130_392_829 145
142 3300053737 Ga0500601_001287 Ga0500601_001287_1573_2010 145
143 3300054114 Ga0501084_1220000 Ga0501084_1220000_56_496 145
144 3300005329 Ga0070683_100446871 Ga0070683_1004468712 146
145 3300031507 Ga0307509_10124458 Ga0307509_101244582 146
146 3300031731 Ga0307405_10061477 Ga0307405_100614772 146
147 3300048090 Ga0495615_0021095 Ga0495615_0021095_234_680 146
148 3300005981 Ga0081538_10008988 Ga0081538_100089884 147
149 3300005981 Ga0081538_10119163 Ga0081538_101191632 147
150 3300049822 Ga0501035_0000097 Ga0501035_0000097_84570_85031 147
151 3300035119 Ga0373956_0061588 Ga0373956_0061588_1081_1527 148
152 3300047318 Ga0495636_0010174 Ga0495636_0010174_622_1074 148
153 3300048903 Ga0496100_0041216 Ga0496100_0041216_848_1300 148
154 3300048912 Ga0496109_0597126 Ga0496109_0597126_160_615 148
155 3300049586 Ga0501070_0013625 Ga0501070_0013625_1194_1640 148
156 3300049742 Ga0501080_0155690 Ga0501080_0155690_1360_1806 148
157 3300006028 Ga0070717_10071226 Ga0070717_100712263 149
158 3300028786 Ga0307517_10068143 Ga0307517_100681432 149
159 3300031507 Ga0307509_10482113 Ga0307509_104821132 149
160 3300031507 Ga0307509_10491723 Ga0307509_104917232 149
161 3300031507 Ga0307509_10534791 Ga0307509_105347912 149
162 3300031616 Ga0307508_10011967 Ga0307508_100119676 149
163 3300031730 Ga0307516_10141681 Ga0307516_101416812 149
164 3300046539 Ga0495621_0103468 Ga0495621_0103468_245_703 149
165 3300046694 Ga0495649_0302410 Ga0495649_0302410_196_645 149
166 3300047318 Ga0495636_0039894 Ga0495636_0039894_961_1419 149
167 3300047472 Ga0495686_0038945 Ga0495686_0038945_1397_1888 149
168 3300048090 Ga0495615_0003321 Ga0495615_0003321_863_1321 149
169 3300049665 Ga0501227_001617 Ga0501227_001617_363_818 149
170 3300053090 Ga0500646_0128212 Ga0500646_0128212_306_755 149
171 3300053094 Ga0500566_0037031 Ga0500566_0037031_621_1073 150
172 3300053136 Ga0500559_0134107 Ga0500559_0134107_406_858 150
173 3300031852 Ga0307410_10864568 Ga0307410_108645681 151
174 3300046539 Ga0495621_0391008 Ga0495621_0391008_83_568 151
175 3300005334 Ga0068869_100013954 Ga0068869_1000139544 152
176 3300005340 Ga0070689_100006519 Ga0070689_1000065194 152
177 3300005438 Ga0070701_10411889 Ga0070701_104118892 152
178 3300005471 Ga0070698_100962758 Ga0070698_1009627581 152
179 3300005535 Ga0070684_100845958 Ga0070684_1008459582 152
180 3300005617 Ga0068859_101778449 Ga0068859_1017784491 152
181 3300005841 Ga0068863_100368702 Ga0068863_1003687021 152
182 3300005844 Ga0068862_101594386 Ga0068862_1015943862 152
183 3300006028 Ga0070717_10014382 Ga0070717_100143824 152
184 3300006931 Ga0097620_101778561 Ga0097620_1017785611 152
185 3300013297 Ga0157378_12587367 Ga0157378_125873671 152
186 3300025936 Ga0207670_10016766 Ga0207670_100167664 152
187 3300025942 Ga0207689_10019339 Ga0207689_100193394 152
188 3300025972 Ga0207668_10368782 Ga0207668_103687821 152
189 3300026075 Ga0207708_10370895 Ga0207708_103708952 152
190 3300028380 Ga0268265_12177417 Ga0268265_121774171 152
191 3300031456 Ga0307513_10004662 Ga0307513_100046626 152
192 3300035113 Ga0373936_0000060 Ga0373936_0000060_49430_49891 152
193 3300035115 Ga0373941_0010413 Ga0373941_0010413_47_535 152
194 3300047472 Ga0495686_0021401 Ga0495686_0021401_1898_2359 152
195 3300050489 nmdc:mga03683_262825_c1 nmdc:mga03683_262825_c1_211_678 152
196 3300005327 Ga0070658_11784979 Ga0070658_117849791 153
197 3300005343 Ga0070687_100464210 Ga0070687_1004642101 153
198 3300025918 Ga0207662_10746082 Ga0207662_107460822 153
199 3300031901 Ga0307406_10004577 Ga0307406_100045772 153
200 3300032126 Ga0307415_100671819 Ga0307415_1006718192 153

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13622

4HBT_3

Acyl-CoA thioesterase N-terminal domain

71

159

0.91

PF03061

4HBT

Thioesterase superfamily

74

151

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3e29-assembly1.cif.gz_D x-ray structure of the protein q7we92_borbr from thioesterase superfamily. northeast structural genomics consortium target bor214a. 0.8566 24 150
5dm5-assembly1.cif.gz_E crystal structure of the hexameric thioesterase y2039 from yersinia pestis 0.8403 67 152
4rmm-assembly1.cif.gz_A-2 crystal structure of the q7nvp2_chrvo protein from chromobacterium violaceum. northeast structural genomics consortium target cvr191 0.835 13 150
2pim-assembly1.cif.gz_A crystal structure of a putative thioesterase, phenylacetic acid degradation-related protein (reut_b4779) from ralstonia eutropha jmp134 at 2.20 a resolution 0.8285 31 150
3lz7-assembly1.cif.gz_A crystal structure of thioesterase hi1161 ec3.1.2.- from haemophilus influenzae. orthorombic crystal form. northeast structural genomics consortium target ir63 0.8277 33 150
ID Description Score Start End Superfamily
af_K7KLB0_34_136_3.10.129.10 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8594 67 149 3.10.129.10
af_K7M802_8_100_3.10.129.10 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8452 69 153 3.10.129.10
af_Q9W439_57_173_3.10.129.10 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8301 94 150 3.10.129.10
3e1eD00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8298 21 153 3.10.129.10
af_A0A1D6K9H0_1_80_3.10.129.10 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8284 77 153 3.10.129.10
ID Description Score Start End GO Terms
AF-A0A7W0VX87-F1-model_v4 PaaI family thioesterase 0.9438 10 133
AF-A0A521QHX7-F1-model_v4 PaaI family thioesterase 0.9336 9 152 GO:0016790
AF-A0A2K4MM04-F1-model_v4 Thioesterase 0.9322 76 152 GO:0016790
AF-A0A534ZWJ7-F1-model_v4 PaaI family thioesterase 0.9314 27 150 GO:0016790
AF-A0A3L7DZQ7-F1-model_v4 PaaI family thioesterase 0.9305 58 153 GO:0016790

Feature Viewer

pLDDT pTM Quality
88.92 0.84 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map