F306276

General Info

Members Datasets Scaffolds Average Seq Length
199 146 199 412

Family's Representative Sequence

Representative Sequence 3300048907|Ga0496104_0039080|Ga0496104_0039080_1017_2336
Length 439
Sequence MSWKRWSESELPCDDWPIMSSGTLVYPIPPDTAPAFDVELARKDFPILSRRMGGKPLVYLDSAATAQKPQAVIDAVSRFYAFNYASVHRGVYRLSEEATVAYEGVREKVAGFLNASSAQEVIFTRGTTDSINLVAQSYGRRFLRPGDEILLTWMEHHSNIVPWQLVAEQTGAVIRAVPITDIGELDLEQFEAMLSHRTRLVSLVHVSNALGTVNPVKQITGMAHSRGIPVVVDGAQSAPHLKVDVRDLDCDFYAFSGHKLYGPTGVGVLYGRASLLNTMPPYQGGGGMIQSVTFEGSSWAPPPARFEAGTPMISEVIGLGAALDYVSSVGRSAVVEWEHQLVNYATETLHEVPGLKLIGTAKDRAGVISFILQGVHPHDIATILDDEGIAIRGGHHCAQPVMDRFHVPGTARLSIALYNTYSEIDVAGLALHRVAKMFG

Samples

Sample ID Description Type Environment
1 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
14 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
15 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
16 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
21 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
22 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
23 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
24 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
30 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
31 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
32 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
35 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
40 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
41 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
42 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
43 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
44 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
68 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
69 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
70 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
72 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
73 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
74 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
75 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
76 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
77 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
78 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
79 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
82 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
87 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
88 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
91 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
92 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
93 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
94 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
95 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
96 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
97 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
100 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
101 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
102 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
103 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
104 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
105 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
106 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
107 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
108 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
109 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
110 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
111 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
112 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
113 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
114 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
115 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
120 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
122 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
124 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
125 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
126 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
127 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
128 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
129 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
130 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
131 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
132 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
133 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
134 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
135 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
136 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
137 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
138 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
139 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
140 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
141 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
142 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
143 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
144 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
145 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
146 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.01
Nodule 0
Rhizoplane 4.02
Rhizosphere 92.96
Stem 0
Stem Tuber 0
Unclassified 2.01

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065707_10088310 3300005295 Bacteria 4693
2 Ga0070683_100000027 3300005329 Bacteria 172200
3 Ga0070670_100000463 3300005331 Bacteria 32853
4 Ga0070670_100069151 3300005331 Bacteria 3031
5 Ga0068869_100060652 3300005334 Bacteria 2773
6 Ga0068868_100052957 3300005338 Bacteria 3196
7 Ga0070668_100069588 3300005347 Bacteria 2738
8 Ga0070669_100159958 3300005353 Bacteria 1749
9 Ga0070675_100014570 3300005354 Bacteria 6201
10 Ga0070675_100087397 3300005354 Bacteria 2607
11 Ga0070711_100052168 3300005439 Bacteria 2813
12 Ga0070694_100159491 3300005444 Bacteria 1654
13 Ga0068867_100027946 3300005459 Bacteria 4058
14 Ga0070684_100026270 3300005535 Bacteria 4904
15 Ga0070704_100019367 3300005549 Bacteria 4372
16 Ga0070664_100003779 3300005564 Bacteria 12215
17 Ga0068857_100010417 3300005577 Bacteria 8080
18 Ga0068854_100090245 3300005578 Bacteria 2278
19 Ga0068856_100103267 3300005614 Bacteria 2844
20 Ga0068859_100057069 3300005617 Bacteria 3933
21 Ga0068863_100025369 3300005841 Bacteria 5652
22 Ga0068862_100060763 3300005844 Bacteria 3247
23 Ga0070717_10003192 3300006028 Bacteria 11711
24 Ga0075365_10064788 3300006038 Bacteria 2449
25 Ga0070716_100012539 3300006173 Bacteria 4299
26 Ga0075428_100002434 3300006844 Bacteria 20219
27 Ga0075431_100073352 3300006847 Bacteria 3531
28 Ga0075433_10022264 3300006852 Bacteria 5319
29 Ga0075433_10107023 3300006852 Bacteria 2479
30 Ga0075433_10181942 3300006852 Bacteria 1871
31 Ga0075434_100143667 3300006871 Bacteria 2406
32 Ga0075429_100000616 3300006880 Bacteria 27440
33 Ga0075436_100006192 3300006914 Bacteria 8205
34 Ga0075436_100012530 3300006914 Bacteria 5811
35 Ga0097620_100057068 3300006931 Bacteria 3933
36 Ga0075435_100012620 3300007076 Bacteria 6259
37 Ga0111539_10000003 3300009094 Bacteria 880006
38 Ga0111539_10004018 3300009094 Bacteria 19307
39 Ga0111539_10247353 3300009094 Bacteria 2076
40 Ga0114129_10012514 3300009147 Bacteria 12082
41 Ga0114129_10023124 3300009147 Bacteria 8816
42 Ga0114129_10055286 3300009147 Bacteria 5564
43 Ga0114129_10072210 3300009147 Bacteria 4811
44 Ga0105241_10056519 3300009174 Bacteria 3009
45 Ga0105238_10000002 3300009551 Bacteria 772711
46 Ga0105249_10001013 3300009553 Bacteria 24888
47 Ga0157369_10000589 3300013105 Bacteria 47375
48 Ga0157369_10130824 3300013105 Bacteria 2660
49 Ga0157369_10156696 3300013105 Bacteria 2405
50 Ga0157374_10147550 3300013296 Bacteria 2285
51 Ga0157375_10000604 3300013308 Bacteria 31871
52 Ga0157375_10055797 3300013308 Bacteria 3897
53 Ga0163163_10016733 3300014325 Bacteria 6822
54 Ga0163163_10156845 3300014325 Bacteria 2320
55 Ga0157380_10026703 3300014326 Bacteria 4386
56 Ga0157380_10117025 3300014326 Bacteria 2251
57 Ga0157376_10000003 3300014969 Bacteria 568634
58 Ga0157376_10054182 3300014969 Bacteria 3343
59 Ga0213876_10000203 3300021384 Bacteria 60770
60 Ga0209675_1004076 3300025291 Bacteria 6654
61 Ga0207688_10022767 3300025901 Bacteria 3430
62 Ga0207645_10003607 3300025907 Bacteria 11712
63 Ga0207643_10009055 3300025908 Bacteria 5346
64 Ga0207694_10000001 3300025924 Bacteria 4078485
65 Ga0207650_10000453 3300025925 Bacteria 34778
66 Ga0207659_10051300 3300025926 Bacteria 2933
67 Ga0207664_10051303 3300025929 Bacteria 3257
68 Ga0207706_10097416 3300025933 Bacteria 2587
69 Ga0207670_10007971 3300025936 Bacteria 5951
70 Ga0207665_10002075 3300025939 Bacteria 13523
71 Ga0207691_10013231 3300025940 Bacteria 7903
72 Ga0207689_10042389 3300025942 Bacteria 3765
73 Ga0207661_10000015 3300025944 Bacteria 318960
74 Ga0207679_10037791 3300025945 Bacteria 3435
75 Ga0207679_10126668 3300025945 Bacteria 2042
76 Ga0207651_10001549 3300025960 Bacteria 10498
77 Ga0207668_10047859 3300025972 Bacteria 2930
78 Ga0207640_10018914 3300025981 Bacteria 4058
79 Ga0207640_10067872 3300025981 Bacteria 2388
80 Ga0207677_10000048 3300026023 Bacteria 101555
81 Ga0207641_10138691 3300026088 Bacteria 2191
82 Ga0207648_10007819 3300026089 Bacteria 10442
83 Ga0207674_10028619 3300026116 Bacteria 5877
84 Ga0207683_10008975 3300026121 Bacteria 8516
85 Ga0209966_1000158 3300027695 Bacteria 28579
86 Ga0209974_10004231 3300027876 Bacteria 5127
87 Ga0207428_10000001 3300027907 Bacteria 1034622
88 Ga0268266_10185962 3300028379 Bacteria 1894
89 Ga0265334_10000017 3300028573 Bacteria 147461
90 Ga0265323_10015081 3300028653 Bacteria 3044
91 Ga0265324_10000034 3300029957 Bacteria 124255
92 Ga0265325_10000663 3300031241 Bacteria 25141
93 Ga0265325_10001352 3300031241 Bacteria 17364
94 Ga0265316_10085635 3300031344 Bacteria 2411
95 Ga0307408_100168795 3300031548 Bacteria 1745
96 Ga0265313_10000022 3300031595 Bacteria 144838
97 Ga0265314_10046954 3300031711 Bacteria 3043
98 Ga0307413_10057578 3300031824 Bacteria 2377
99 Ga0307410_10051125 3300031852 Bacteria 2783
100 Ga0307407_10025422 3300031903 Bacteria 3120
101 Ga0307409_100024650 3300031995 Bacteria 4200
102 Ga0307416_100109249 3300032002 Bacteria 2432
103 Ga0307414_10005549 3300032004 Bacteria 6959
104 Ga0307411_10035649 3300032005 Bacteria 3109
105 Ga0373936_0001853 3300035113 Bacteria 7795
106 Ga0373935_0010120 3300035692 Bacteria 5648
107 Ga0373927_0006641 3300035695 Bacteria 7874
108 Ga0373937_0055700 3300036401 Bacteria 3631
109 Ga0373937_0135453 3300036401 Bacteria 2303
110 Ga0316582_0045632 3300036647 Bacteria 2760
111 Ga0316584_0126294 3300036712 Bacteria 1910
112 Ga0373925_0021012 3300037068 Bacteria 4757
113 Ga0373925_0098621 3300037068 Bacteria 2243
114 Ga0373925_0116900 3300037068 Bacteria 2066
115 Ga0436365_0968862 3300039437 Bacteria 3322
116 Ga0436365_1524178 3300039437 Bacteria 77408
117 Ga0436362_0948018 3300039453 Bacteria 6477
118 Ga0439446_0002182 3300042156 Bacteria 4662
119 Ga0439434_0002910 3300042435 Bacteria 4998
120 Ga0453684_0054778 3300044712 Bacteria 5191
121 Ga0453684_0131428 3300044712 Bacteria 3003
122 Ga0453684_0180961 3300044712 Bacteria 2475
123 Ga0466960_0093084 3300044901 Bacteria 1540
124 Ga0495580_0000634 3300046472 Bacteria 29763
125 Ga0495580_0001417 3300046472 Bacteria 21074
126 Ga0495582_0012769 3300046473 Bacteria 4627
127 Ga0495628_0091515 3300046516 Bacteria 2354
128 Ga0495630_0088949 3300046517 Bacteria 2332
129 Ga0495648_0064448 3300046524 Bacteria 2158
130 Ga0495666_0000338 3300046526 Bacteria 20451
131 Ga0495666_0047763 3300046526 Bacteria 2062
132 Ga0495665_0015678 3300046531 Bacteria 4079
133 Ga0495665_0080002 3300046531 Bacteria 1719
134 Ga0495587_0017182 3300046536 Bacteria 4499
135 Ga0495613_0034836 3300046689 Bacteria 3738
136 Ga0495581_0049600 3300047315 Bacteria 2424
137 Ga0495581_0070096 3300047315 Bacteria 2027
138 Ga0495674_0020866 3300047319 Bacteria 6065
139 Ga0495675_0081947 3300047444 Bacteria 2032
140 Ga0495602_0036420 3300048088 Bacteria 4580
141 Ga0496100_0320962 3300048903 Bacteria 1163
142 Ga0496104_0039080 3300048907 Bacteria 4442
143 Ga0496108_0045023 3300048911 Bacteria 3684
144 Ga0496110_0011807 3300048913 Bacteria 7170
145 Ga0496112_0018055 3300048915 Bacteria 6639
146 Ga0496112_0162348 3300048915 Bacteria 2201
147 Ga0496112_0190151 3300048915 Bacteria 2015
148 Ga0496113_0026799 3300048916 Bacteria 4125
149 Ga0496124_0185896 3300048927 Bacteria 1595
150 Ga0501037_0074881 3300049573 Bacteria 2459
151 Ga0501037_0249637 3300049573 Bacteria 1242
152 Ga0501040_0039413 3300049576 Bacteria 3213
153 Ga0501042_0136905 3300049578 Bacteria 1766
154 Ga0501048_0020693 3300049582 Bacteria 4823
155 Ga0501070_0037039 3300049586 Bacteria 4072
156 Ga0501072_0084667 3300049588 Bacteria 2514
157 Ga0501072_0150118 3300049588 Bacteria 1858
158 Ga0501074_0064392 3300049590 Bacteria 2639
159 Ga0501075_0098943 3300049591 Bacteria 2214
160 Ga0501077_0000355 3300049593 Bacteria 27126
161 Ga0501077_0007824 3300049593 Bacteria 6599
162 Ga0501080_0134983 3300049742 Bacteria 2284
163 Ga0501081_0012284 3300049743 Bacteria 5622
164 Ga0501081_0053115 3300049743 Bacteria 2797
165 Ga0501081_0084214 3300049743 Bacteria 2230
166 Ga0501081_0264660 3300049743 Bacteria 1257
167 Ga0501045_0051540 3300049824 Bacteria 3003
168 Ga0501045_0056187 3300049824 Bacteria 2879
169 Ga0501045_0095207 3300049824 Bacteria 2203
170 nmdc:mga05p37_10409_c1 3300050507 Bacteria 11040
171 nmdc:mga05p37_17402_c1 3300050507 Bacteria 8674
172 nmdc:mga05p37_35800_c1 3300050507 Bacteria 6089
173 nmdc:mga09592_30355_c1 3300050508 Bacteria 4497
174 nmdc:mga09592_4423_c1 3300050508 Bacteria 11379
175 nmdc:mga0qj67_5249_c1 3300050509 Bacteria 9447
176 nmdc:mga06r32_130476_c1 3300050510 Bacteria 2485
177 nmdc:mga06r32_137724_c1 3300050510 Bacteria 2416
178 nmdc:mga08y16_12331_c1 3300050511 Bacteria 8988
179 nmdc:mga08y16_1_c1 3300050511 Bacteria 1034622
180 nmdc:mga08y16_66943_c1 3300050511 Bacteria 3748
181 nmdc:mga0n895_13518_c1 3300050512 Bacteria 7370
182 nmdc:mga0n895_193817_c1 3300050512 Bacteria 2063
183 nmdc:mga0n895_223360_c1 3300050512 Bacteria 1912
184 nmdc:mga0rr50_7195_c1 3300050513 Bacteria 6839
185 nmdc:mga08x19_7_c1 3300050514 Bacteria 437351
186 nmdc:mga0a205_151068_c1 3300050515 Bacteria 2222
187 nmdc:mga0a205_27465_c1 3300050515 Bacteria 5434
188 nmdc:mga0a205_33990_c1 3300050515 Bacteria 4891
189 Ga0501084_0006400 3300054114 Bacteria 9678
190 Ga0590071_007727 3300059421 Bacteria 2541
191 Ga0590074_006464 3300059423 Bacteria 1945
192 Ga0590075_023432 3300059424 Bacteria 1547
193 Ga0590077_003907 3300059426 Bacteria 3075
194 Ga0501082_0065811 3300060353 Bacteria 3121
195 Ga0501082_0132722 3300060353 Bacteria 2160
196 Ga0530510_0000078 3300061734 Bacteria 50426
197 Ga0530510_0012033 3300061734 Bacteria 6070
198 Ga0530510_0020543 3300061734 Bacteria 4696
199 Ga0530510_0026830 3300061734 Bacteria 4126

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046517 Ga0495630_0088949 Ga0495630_0088949_1247_2311 335
2 3300046524 Ga0495648_0064448 Ga0495648_0064448_1073_2137 335
3 3300046526 Ga0495666_0000338 Ga0495666_0000338_19366_20430 335
4 3300046531 Ga0495665_0080002 Ga0495665_0080002_21_1085 335
5 3300047315 Ga0495581_0070096 Ga0495581_0070096_937_2001 335
6 3300048903 Ga0496100_0320962 Ga0496100_0320962_67_1131 335
7 3300049573 Ga0501037_0249637 Ga0501037_0249637_100_1194 346
8 3300049590 Ga0501074_0064392 Ga0501074_0064392_468_1562 346
9 3300049593 Ga0501077_0007824 Ga0501077_0007824_2386_3480 346
10 3300049742 Ga0501080_0134983 Ga0501080_0134983_998_2092 346
11 3300049743 Ga0501081_0053115 Ga0501081_0053115_904_1998 346
12 3300049743 Ga0501081_0264660 Ga0501081_0264660_44_1138 346
13 3300060353 Ga0501082_0065811 Ga0501082_0065811_1592_2686 346
14 3300061734 Ga0530510_0026830 Ga0530510_0026830_2192_3286 346
15 3300044712 Ga0453684_0054778 Ga0453684_0054778_2041_3288 357
16 3300009147 Ga0114129_10012514 Ga0114129_100125142 364
17 3300046536 Ga0495587_0017182 Ga0495587_0017182_2700_3848 364
18 3300048915 Ga0496112_0190151 Ga0496112_0190151_163_1326 369
19 3300049743 Ga0501081_0012284 Ga0501081_0012284_1986_3185 374
20 3300006871 Ga0075434_100143667 Ga0075434_1001436672 380
21 3300027695 Ga0209966_1000158 Ga0209966_100015820 380
22 3300049824 Ga0501045_0051540 Ga0501045_0051540_836_2035 381
23 3300005841 Ga0068863_100025369 Ga0068863_1000253691 384
24 3300009094 Ga0111539_10000003 Ga0111539_10000003391 384
25 3300026088 Ga0207641_10138691 Ga0207641_101386911 384
26 3300050511 nmdc:mga08y16_1_c1 nmdc:mga08y16_1_c1_440807_442015 384
27 3300049573 Ga0501037_0074881 Ga0501037_0074881_1147_2367 385
28 3300049586 Ga0501070_0037039 Ga0501070_0037039_2807_4027 385
29 3300054114 Ga0501084_0006400 Ga0501084_0006400_4558_5793 387
30 3300044712 Ga0453684_0131428 Ga0453684_0131428_680_1906 388
31 3300044712 Ga0453684_0180961 Ga0453684_0180961_1077_2303 388
32 3300049576 Ga0501040_0039413 Ga0501040_0039413_1526_2746 388
33 3300049578 Ga0501042_0136905 Ga0501042_0136905_76_1296 388
34 3300049588 Ga0501072_0150118 Ga0501072_0150118_310_1530 388
35 3300049591 Ga0501075_0098943 Ga0501075_0098943_322_1542 388
36 3300049743 Ga0501081_0084214 Ga0501081_0084214_578_1798 388
37 3300049824 Ga0501045_0095207 Ga0501045_0095207_125_1345 388
38 3300061734 Ga0530510_0000078 Ga0530510_0000078_16517_17737 388
39 3300061734 Ga0530510_0012033 Ga0530510_0012033_3731_4951 388
40 3300013105 Ga0157369_10130824 Ga0157369_101308244 389
41 3300036401 Ga0373937_0055700 Ga0373937_0055700_1230_2477 389
42 3300050512 nmdc:mga0n895_193817_c1 nmdc:mga0n895_193817_c1_225_1448 389
43 3300050515 nmdc:mga0a205_151068_c1 nmdc:mga0a205_151068_c1_268_1491 389
44 3300050509 nmdc:mga0qj67_5249_c1 nmdc:mga0qj67_5249_c1_7054_8298 390
45 3300050510 nmdc:mga06r32_137724_c1 nmdc:mga06r32_137724_c1_492_1736 390
46 3300029957 Ga0265324_10000034 Ga0265324_1000003490 391
47 3300031241 Ga0265325_10000663 Ga0265325_1000066322 391
48 3300031711 Ga0265314_10046954 Ga0265314_100469542 391
49 3300036401 Ga0373937_0135453 Ga0373937_0135453_1042_2274 391
50 3300005331 Ga0070670_100069151 Ga0070670_1000691513 392
51 3300005334 Ga0068869_100060652 Ga0068869_1000606521 392
52 3300005459 Ga0068867_100027946 Ga0068867_1000279465 392
53 3300014325 Ga0163163_10016733 Ga0163163_100167332 392
54 3300014326 Ga0157380_10026703 Ga0157380_100267034 392
55 3300025907 Ga0207645_10003607 Ga0207645_100036078 392
56 3300025908 Ga0207643_10009055 Ga0207643_100090553 392
57 3300025926 Ga0207659_10051300 Ga0207659_100513004 392
58 3300025940 Ga0207691_10013231 Ga0207691_100132315 392
59 3300025942 Ga0207689_10042389 Ga0207689_100423896 392
60 3300025972 Ga0207668_10047859 Ga0207668_100478592 392
61 3300026089 Ga0207648_10007819 Ga0207648_100078199 392
62 3300005347 Ga0070668_100069588 Ga0070668_1000695882 393
63 3300005353 Ga0070669_100159958 Ga0070669_1001599582 393
64 3300005354 Ga0070675_100014570 Ga0070675_1000145708 393
65 3300006038 Ga0075365_10064788 Ga0075365_100647882 393
66 3300014326 Ga0157380_10117025 Ga0157380_101170252 393
67 3300028379 Ga0268266_10185962 Ga0268266_101859622 393
68 3300005354 Ga0070675_100087397 Ga0070675_1000873972 394
69 3300005444 Ga0070694_100159491 Ga0070694_1001594912 394
70 3300006847 Ga0075431_100073352 Ga0075431_1000733522 394
71 3300006852 Ga0075433_10022264 Ga0075433_100222645 394
72 3300009147 Ga0114129_10023124 Ga0114129_100231244 394
73 3300009147 Ga0114129_10072210 Ga0114129_100722106 394
74 3300013105 Ga0157369_10156696 Ga0157369_101566963 394
75 3300014969 Ga0157376_10054182 Ga0157376_100541823 394
76 3300026121 Ga0207683_10008975 Ga0207683_100089752 394
77 3300046472 Ga0495580_0001417 Ga0495580_0001417_8236_9495 394
78 3300046516 Ga0495628_0091515 Ga0495628_0091515_389_1636 394
79 3300047444 Ga0495675_0081947 Ga0495675_0081947_209_1462 394
80 3300048088 Ga0495602_0036420 Ga0495602_0036420_334_1581 394
81 3300048915 Ga0496112_0162348 Ga0496112_0162348_257_1495 394
82 3300050507 nmdc:mga05p37_17402_c1 nmdc:mga05p37_17402_c1_5689_6936 394
83 3300050507 nmdc:mga05p37_35800_c1 nmdc:mga05p37_35800_c1_4144_5394 394
84 3300050508 nmdc:mga09592_30355_c1 nmdc:mga09592_30355_c1_2109_3359 394
85 3300050510 nmdc:mga06r32_130476_c1 nmdc:mga06r32_130476_c1_489_1739 394
86 3300050512 nmdc:mga0n895_223360_c1 nmdc:mga0n895_223360_c1_296_1546 394
87 3300050515 nmdc:mga0a205_27465_c1 nmdc:mga0a205_27465_c1_3130_4380 394
88 3300050515 nmdc:mga0a205_33990_c1 nmdc:mga0a205_33990_c1_2378_3625 394
89 3300059421 Ga0590071_007727 Ga0590071_007727_344_1666 394
90 3300059423 Ga0590074_006464 Ga0590074_006464_528_1772 394
91 3300025933 Ga0207706_10097416 Ga0207706_100974163 395
92 3300027876 Ga0209974_10004231 Ga0209974_100042313 395
93 3300044901 Ga0466960_0093084 Ga0466960_0093084_60_1331 395
94 3300005295 Ga0065707_10088310 Ga0065707_100883104 396
95 3300005329 Ga0070683_100000027 Ga0070683_100000027132 396
96 3300005331 Ga0070670_100000463 Ga0070670_10000046322 396
97 3300005338 Ga0068868_100052957 Ga0068868_1000529572 396
98 3300005439 Ga0070711_100052168 Ga0070711_1000521682 396
99 3300005535 Ga0070684_100026270 Ga0070684_1000262704 396
100 3300005549 Ga0070704_100019367 Ga0070704_1000193674 396
101 3300005564 Ga0070664_100003779 Ga0070664_1000037794 396
102 3300005577 Ga0068857_100010417 Ga0068857_1000104179 396
103 3300005578 Ga0068854_100090245 Ga0068854_1000902452 396
104 3300005614 Ga0068856_100103267 Ga0068856_1001032674 396
105 3300005617 Ga0068859_100057069 Ga0068859_1000570694 396
106 3300005844 Ga0068862_100060763 Ga0068862_1000607633 396
107 3300006028 Ga0070717_10003192 Ga0070717_100031922 396
108 3300006173 Ga0070716_100012539 Ga0070716_1000125394 396
109 3300006844 Ga0075428_100002434 Ga0075428_10000243418 396
110 3300006852 Ga0075433_10107023 Ga0075433_101070232 396
111 3300006852 Ga0075433_10181942 Ga0075433_101819422 396
112 3300006880 Ga0075429_100000616 Ga0075429_10000061617 396
113 3300006914 Ga0075436_100006192 Ga0075436_1000061927 396
114 3300006914 Ga0075436_100012530 Ga0075436_1000125306 396
115 3300006931 Ga0097620_100057068 Ga0097620_1000570684 396
116 3300007076 Ga0075435_100012620 Ga0075435_1000126202 396
117 3300009094 Ga0111539_10004018 Ga0111539_1000401822 396
118 3300009094 Ga0111539_10247353 Ga0111539_102473532 396
119 3300009147 Ga0114129_10055286 Ga0114129_100552865 396
120 3300009174 Ga0105241_10056519 Ga0105241_100565193 396
121 3300009551 Ga0105238_10000002 Ga0105238_10000002173 396
122 3300009553 Ga0105249_10001013 Ga0105249_1000101321 396
123 3300013105 Ga0157369_10000589 Ga0157369_1000058933 396
124 3300013296 Ga0157374_10147550 Ga0157374_101475502 396
125 3300013308 Ga0157375_10000604 Ga0157375_1000060425 396
126 3300013308 Ga0157375_10055797 Ga0157375_100557972 396
127 3300014325 Ga0163163_10156845 Ga0163163_101568452 396
128 3300014969 Ga0157376_10000003 Ga0157376_1000000328 396
129 3300021384 Ga0213876_10000203 Ga0213876_1000020343 396
130 3300025291 Ga0209675_1004076 Ga0209675_10040766 396
131 3300025901 Ga0207688_10022767 Ga0207688_100227672 396
132 3300025924 Ga0207694_10000001 Ga0207694_10000001174 396
133 3300025925 Ga0207650_10000453 Ga0207650_100004537 396
134 3300025929 Ga0207664_10051303 Ga0207664_100513032 396
135 3300025936 Ga0207670_10007971 Ga0207670_100079712 396
136 3300025939 Ga0207665_10002075 Ga0207665_100020757 396
137 3300025944 Ga0207661_10000015 Ga0207661_1000001552 396
138 3300025945 Ga0207679_10037791 Ga0207679_100377913 396
139 3300025945 Ga0207679_10126668 Ga0207679_101266682 396
140 3300025960 Ga0207651_10001549 Ga0207651_100015494 396
141 3300025981 Ga0207640_10018914 Ga0207640_100189142 396
142 3300025981 Ga0207640_10067872 Ga0207640_100678723 396
143 3300026023 Ga0207677_10000048 Ga0207677_100000486 396
144 3300026116 Ga0207674_10028619 Ga0207674_100286192 396
145 3300027907 Ga0207428_10000001 Ga0207428_10000001540 396
146 3300028573 Ga0265334_10000017 Ga0265334_1000001718 396
147 3300028653 Ga0265323_10015081 Ga0265323_100150812 396
148 3300031241 Ga0265325_10001352 Ga0265325_100013528 396
149 3300031344 Ga0265316_10085635 Ga0265316_100856352 396
150 3300031548 Ga0307408_100168795 Ga0307408_1001687952 396
151 3300031595 Ga0265313_10000022 Ga0265313_1000002244 396
152 3300031824 Ga0307413_10057578 Ga0307413_100575782 396
153 3300031852 Ga0307410_10051125 Ga0307410_100511252 396
154 3300031903 Ga0307407_10025422 Ga0307407_100254223 396
155 3300031995 Ga0307409_100024650 Ga0307409_1000246504 396
156 3300032002 Ga0307416_100109249 Ga0307416_1001092493 396
157 3300032004 Ga0307414_10005549 Ga0307414_100055495 396
158 3300032005 Ga0307411_10035649 Ga0307411_100356494 396
159 3300035113 Ga0373936_0001853 Ga0373936_0001853_2357_3637 396
160 3300035692 Ga0373935_0010120 Ga0373935_0010120_3462_4742 396
161 3300035695 Ga0373927_0006641 Ga0373927_0006641_826_2106 396
162 3300036647 Ga0316582_0045632 Ga0316582_0045632_371_1636 396
163 3300036712 Ga0316584_0126294 Ga0316584_0126294_403_1668 396
164 3300037068 Ga0373925_0021012 Ga0373925_0021012_2350_3630 396
165 3300037068 Ga0373925_0098621 Ga0373925_0098621_249_1529 396
166 3300037068 Ga0373925_0116900 Ga0373925_0116900_607_1860 396
167 3300039437 Ga0436365_0968862 Ga0436365_0968862_764_2062 396
168 3300039437 Ga0436365_1524178 Ga0436365_1524178_74187_75437 396
169 3300039453 Ga0436362_0948018 Ga0436362_0948018_4591_5841 396
170 3300042156 Ga0439446_0002182 Ga0439446_0002182_800_2053 396
171 3300042435 Ga0439434_0002910 Ga0439434_0002910_403_1656 396
172 3300046472 Ga0495580_0000634 Ga0495580_0000634_23342_24622 396
173 3300046473 Ga0495582_0012769 Ga0495582_0012769_2254_3534 396
174 3300046526 Ga0495666_0047763 Ga0495666_0047763_139_1419 396
175 3300046531 Ga0495665_0015678 Ga0495665_0015678_1078_2358 396
176 3300046689 Ga0495613_0034836 Ga0495613_0034836_819_2087 396
177 3300047315 Ga0495581_0049600 Ga0495581_0049600_460_1740 396
178 3300047319 Ga0495674_0020866 Ga0495674_0020866_1843_3102 396
179 3300048907 Ga0496104_0039080 Ga0496104_0039080_1017_2336 396
180 3300048911 Ga0496108_0045023 Ga0496108_0045023_926_2245 396
181 3300048913 Ga0496110_0011807 Ga0496110_0011807_2016_3335 396
182 3300048915 Ga0496112_0018055 Ga0496112_0018055_815_2089 396
183 3300048916 Ga0496113_0026799 Ga0496113_0026799_1976_3295 396
184 3300048927 Ga0496124_0185896 Ga0496124_0185896_45_1328 396
185 3300049582 Ga0501048_0020693 Ga0501048_0020693_971_2254 396
186 3300049588 Ga0501072_0084667 Ga0501072_0084667_431_1714 396
187 3300049593 Ga0501077_0000355 Ga0501077_0000355_7586_8869 396
188 3300049824 Ga0501045_0056187 Ga0501045_0056187_654_1913 396
189 3300050507 nmdc:mga05p37_10409_c1 nmdc:mga05p37_10409_c1_7962_9224 396
190 3300050508 nmdc:mga09592_4423_c1 nmdc:mga09592_4423_c1_8884_10146 396
191 3300050511 nmdc:mga08y16_12331_c1 nmdc:mga08y16_12331_c1_370_1629 396
192 3300050511 nmdc:mga08y16_66943_c1 nmdc:mga08y16_66943_c1_427_1689 396
193 3300050512 nmdc:mga0n895_13518_c1 nmdc:mga0n895_13518_c1_76_1374 396
194 3300050513 nmdc:mga0rr50_7195_c1 nmdc:mga0rr50_7195_c1_3496_4776 396
195 3300050514 nmdc:mga08x19_7_c1 nmdc:mga08x19_7_c1_242732_243997 396
196 3300059424 Ga0590075_023432 Ga0590075_023432_182_1435 396
197 3300059426 Ga0590077_003907 Ga0590077_003907_970_2292 396
198 3300060353 Ga0501082_0132722 Ga0501082_0132722_579_1862 396
199 3300061734 Ga0530510_0020543 Ga0530510_0020543_1197_2480 396

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00266

Aminotran_5

Aminotransferase class-V

58

426

1

PF01212

Beta_elim_lyase

Beta-eliminating lyase

107

368

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
6c9e-assembly1.cif.gz_A crystal structure of cysteine desulfurase from legionella pneumophila philadelphia 1 0.9636 11 396
4w91-assembly3.cif.gz_E crystal structure of a cysteine desulfurase sufs from brucella suis bound to plp 0.9615 11 396
7e6c-assembly1.cif.gz_A crystal structure of l-cycloserine-bound form of cysteine desulfurase sufs c361a from bacillus subtilis 0.9605 12 395
7e6e-assembly1.cif.gz_A crystal structure of pmp-bound form of cysteine desulfurase sufs r376a from bacillus subtilis in d-cycloserine-inhibition 0.9604 12 395
7ceq-assembly1.cif.gz_A crystal structure of cysteine desulfurase sufs h121a from bacillus subtilis 0.9603 12 395
ID Description Score Start End Superfamily
4w91I01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9781 290 396 3.90.1150.10
5j8qA01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9626 287 395 3.90.1150.10
1i29A01 Alpha Beta;Alpha-Beta Complex;Aspartate Aminotransferase, domain 1;Aspartate Aminotransferase, domain 1 0.9555 287 390 3.90.1150.10
af_A0A368UH16_90_350_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9548 44 285 3.40.640.10
af_Q0INV6_1_200_3.40.640.10 Alpha Beta;3-Layer(aba) Sandwich;Aspartate Aminotransferase; domain 2;Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.9539 97 276 3.40.640.10
ID Description Score Start End GO Terms
AF-A0A2T4XGS0-F1-model_v4 Cysteine desulfurase CsdA 0.9845 188 394
AF-A0A438CYE2-F1-model_v4 Cysteine desulfurase 1, chloroplastic 0.9829 188 308
AF-A0A3D1RVD1-F1-model_v4 Cysteine desulfurase CsdA 0.9828 265 395
AF-A0A2H6EQB4-F1-model_v4 Putative cysteine desulfurase (EC 2.8.1.7) 0.9821 219 396 GO:0031071
AF-A0A2G6KHX9-F1-model_v4 Cysteine desulfurase CsdA 0.9817 276 395

Feature Viewer

pLDDT pTM Quality
90.46 0.89 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map