F301231

General Info

Members Datasets Scaffolds Average Seq Length
196 126 392 282

Family's Representative Sequence

Representative Sequence 3300005518|Ga0070699_100255668|Ga0070699_1002556682
Length 314
Sequence MSAADGVAEGSGRAAGGPARRGARAFVGRPTTSPQDAATWSRRDVILNNLRSVRGRAYPRVRGLAREKSWLIFEILLPFLTTAAFVFVYRALQAPQEYVGFVVLGGAMTAFWLNVIWMMAAQLYWEKDQGNLELYFAAPMNLMAVLFGMALGGMVMSSTRALIVLLIATLVFGVRFSVDQWFLLLAVFALTLAALYGLGMVLASLFLAWGREAWHLTQALTEPVYFVSGLNFPVGRLGFIGALAIAFLPLAVGLDAMRQLAFAGSGIIHGTPPPEIEALILVVMTIVFLLLARWSLAALELRARRDGRLTVRWR

Samples

Sample ID Description Type Environment
1 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
6 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
7 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
8 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
9 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
10 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
11 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
12 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
15 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
16 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
17 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
18 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
19 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
20 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
21 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
24 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
25 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
28 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
29 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
32 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
33 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
34 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
37 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
49 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
50 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
51 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
52 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
53 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
54 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
55 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
56 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
57 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
58 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
59 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
60 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
61 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
62 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
63 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
64 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
65 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
68 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
69 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
70 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
71 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
72 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
73 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
74 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
75 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
76 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
77 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
78 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
79 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
82 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
83 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
84 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
85 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
86 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
87 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
88 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
89 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
90 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
91 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
92 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
93 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
94 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
95 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
96 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
97 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
98 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
99 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
100 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
101 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
107 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
108 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
109 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
110 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
111 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
112 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
113 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
114 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
115 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
117 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
118 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
119 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
120 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
121 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
122 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
123 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
124 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
125 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
126 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.04
Rhizosphere 96.43
Stem 0
Stem Tuber 0
Unclassified 16.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070699_100255668 3300005518 Bacteria 1566
2 JGI25406J46586_10007763 3300003203 Bacteria 4881
3 Ga0065707_10084681 3300005295 Bacteria 6894
4 Ga0070683_100188319 3300005329 Bacteria 1959
5 Ga0070713_100093844 3300005436 Bacteria 2586
6 Ga0070694_100078299 3300005444 Bacteria 2293
7 Ga0070694_100332507 3300005444 Bacteria 1172
8 Ga0070706_100227741 3300005467 Bacteria 1740
9 Ga0070698_100044626 3300005471 Bacteria 4538
10 Ga0070698_100406009 3300005471 Bacteria 1296
11 Ga0070699_100002030 3300005518 Bacteria 18283
12 Ga0070697_100318785 3300005536 Bacteria 1338
13 Ga0070696_100021179 3300005546 Bacteria 4408
14 Ga0070704_100019740 3300005549 Bacteria 4336
15 Ga0070704_100448439 3300005549 Bacteria 1110
16 Ga0068857_100525121 3300005577 Unclassified 1113
17 Ga0068864_100117587 3300005618 Bacteria 2373
18 Ga0068863_100101773 3300005841 Unclassified 2731
19 Ga0068863_100139194 3300005841 Unclassified 2319
20 Ga0068858_100063865 3300005842 Bacteria 3406
21 Ga0068862_100064269 3300005844 Bacteria 3159
22 Ga0068862_100308619 3300005844 Bacteria 1457
23 Ga0081539_10002067 3300005985 Bacteria 30073
24 Ga0081539_10011517 3300005985 Bacteria 6981
25 Ga0097621_100166442 3300006237 Bacteria 1898
26 Ga0068871_100075326 3300006358 Bacteria 2786
27 Ga0068871_100412866 3300006358 Unclassified 1204
28 Ga0075428_100032091 3300006844 Bacteria 5803
29 Ga0075428_100107007 3300006844 Bacteria 3048
30 Ga0075430_100021612 3300006846 Bacteria 5468
31 Ga0075430_100427469 3300006846 Bacteria 1093
32 Ga0075431_100057249 3300006847 Bacteria 4020
33 Ga0075431_100200860 3300006847 Unclassified 2040
34 Ga0075431_100498569 3300006847 Bacteria 1209
35 Ga0075434_100075913 3300006871 Bacteria 3355
36 Ga0075429_100053931 3300006880 Bacteria 3498
37 Ga0075429_100054962 3300006880 Bacteria 3464
38 Ga0075435_100067381 3300007076 Bacteria 2915
39 Ga0114129_10004481 3300009147 Bacteria 19691
40 Ga0114129_10056898 3300009147 Bacteria 5475
41 Ga0114129_10414270 3300009147 Bacteria 1774
42 Ga0105243_10327020 3300009148 Bacteria 1399
43 Ga0105242_10267366 3300009176 Unclassified 1547
44 Ga0105249_10030652 3300009553 Bacteria 4863
45 Ga0105249_10046628 3300009553 Bacteria 3945
46 Ga0157374_10340945 3300013296 Bacteria 1488
47 Ga0157372_10228309 3300013307 Bacteria 2158
48 Ga0157375_10173678 3300013308 Bacteria 2304
49 Ga0163163_10062899 3300014325 Bacteria 3679
50 Ga0163163_10156872 3300014325 Bacteria 2320
51 Ga0157380_10051161 3300014326 Bacteria 3266
52 Ga0157380_10541893 3300014326 Bacteria 1140
53 Ga0157376_10220149 3300014969 Bacteria 1758
54 Ga0163161_10054325 3300017792 Unclassified 2907
55 Ga0207643_10103444 3300025908 Bacteria 1672
56 Ga0207684_10528572 3300025910 Bacteria 1010
57 Ga0207646_10433167 3300025922 Bacteria 1187
58 Ga0207669_10229871 3300025937 Bacteria 1368
59 Ga0207712_10005995 3300025961 Bacteria 7670
60 Ga0207703_10133670 3300026035 Bacteria 2145
61 Ga0207641_10359124 3300026088 Unclassified 1390
62 Ga0207676_10460186 3300026095 Unclassified 1201
63 Ga0209968_1004607 3300027526 Bacteria 2068
64 Ga0209999_1019995 3300027543 Bacteria 1228
65 Ga0268265_10055009 3300028380 Bacteria 3022
66 Ga0265326_10025242 3300028558 Bacteria 1695
67 Ga0265326_10070880 3300028558 Unclassified 985
68 Ga0265319_1000771 3300028563 Bacteria 20809
69 Ga0265319_1006537 3300028563 Bacteria 5384
70 Ga0265334_10001884 3300028573 Bacteria 9948
71 Ga0265318_10001482 3300028577 Bacteria 13732
72 Ga0265318_10022853 3300028577 Bacteria 2497
73 Ga0265318_10031029 3300028577 Unclassified 2076
74 Ga0265318_10046246 3300028577 Bacteria 1643
75 Ga0265322_10012332 3300028654 Bacteria 2473
76 Ga0265336_10006147 3300028666 Bacteria 4349
77 Ga0265338_10081954 3300028800 Bacteria 2703
78 Ga0265338_10290325 3300028800 Unclassified 1192
79 Ga0265324_10099855 3300029957 Bacteria 986
80 Ga0265332_10027277 3300031238 Bacteria 2502
81 Ga0265332_10115866 3300031238 Bacteria 1127
82 Ga0265320_10002034 3300031240 Bacteria 14256
83 Ga0265320_10020506 3300031240 Bacteria 3582
84 Ga0265325_10017602 3300031241 Bacteria 3972
85 Ga0265340_10007025 3300031247 Bacteria 6141
86 Ga0265339_10030830 3300031249 Bacteria 3034
87 Ga0265339_10051361 3300031249 Bacteria 2250
88 Ga0265339_10076967 3300031249 Bacteria 1768
89 Ga0265331_10021489 3300031250 Bacteria 3303
90 Ga0265331_10028773 3300031250 Bacteria 2777
91 Ga0265316_10020375 3300031344 Bacteria 5646
92 Ga0265313_10024517 3300031595 Bacteria 3221
93 Ga0316575_10067219 3300031665 Unclassified 1436
94 Ga0316579_10000181 3300031691 Bacteria 18345
95 Ga0265314_10004230 3300031711 Bacteria 13456
96 Ga0265314_10020359 3300031711 Bacteria 5122
97 Ga0316576_10022354 3300031727 Bacteria 4390
98 Ga0316578_10028562 3300031728 Bacteria 3160
99 Ga0316578_10037399 3300031728 Bacteria 2796
100 Ga0316577_10001297 3300031733 Bacteria 11680
101 Ga0316577_10021075 3300031733 Bacteria 3614
102 Ga0316577_10032207 3300031733 Bacteria 2928
103 Ga0307407_10251742 3300031903 Bacteria 1211
104 Ga0316585_10013117 3300032137 Bacteria 2465
105 Ga0316574_0000328 3300035398 Bacteria 18221
106 Ga0316574_0000626 3300035398 Bacteria 14785
107 Ga0373933_0103967 3300035724 Bacteria 1765
108 Ga0373937_0013182 3300036401 Bacteria 7279
109 Ga0373937_0027254 3300036401 Bacteria 5167
110 Ga0316582_0002861 3300036647 Bacteria 8271
111 Ga0316582_0004095 3300036647 Bacteria 7293
112 Ga0316582_0014394 3300036647 Unclassified 4488
113 Ga0316582_0093686 3300036647 Unclassified 1981
114 Ga0316582_0105801 3300036647 Unclassified 1868
115 Ga0316584_0042641 3300036712 Bacteria 3382
116 Ga0316584_0132118 3300036712 Unclassified 1864
117 Ga0316581_0002192 3300037588 Bacteria 4615
118 Ga0400488_04730 3300038741 Bacteria 4408
119 Ga0400487_35020 3300039110 Unclassified 1832
120 Ga0436365_1569629 3300039437 Bacteria 1114
121 Ga0439457_037880 3300042014 Bacteria 1074
122 Ga0451577_0015997 3300042876 Bacteria 6960
123 Ga0451577_0127168 3300042876 Bacteria 2284
124 Ga0451577_0128963 3300042876 Bacteria 2268
125 Ga0453683_0031273 3300044673 Unclassified 3363
126 Ga0453684_0000012 3300044712 Bacteria 1062512
127 Ga0453684_0000718 3300044712 Bacteria 117108
128 Ga0453684_0002198 3300044712 Bacteria 48526
129 Ga0453684_0005144 3300044712 Bacteria 26311
130 Ga0453684_0035525 3300044712 Bacteria 6885
131 Ga0453684_0043392 3300044712 Bacteria 6044
132 Ga0453684_0386367 3300044712 Unclassified 1571
133 Ga0495592_0009623 3300046454 Bacteria 7274
134 Ga0495603_0103042 3300046455 Unclassified 1666
135 Ga0495629_0013900 3300046459 Bacteria 5805
136 Ga0495580_0131129 3300046472 Bacteria 1739
137 Ga0495608_0014105 3300046511 Bacteria 5546
138 Ga0495608_0023872 3300046511 Bacteria 4184
139 Ga0495618_0038498 3300046514 Bacteria 3006
140 Ga0495667_0125238 3300046559 Bacteria 1658
141 Ga0495599_0238638 3300046678 Bacteria 1109
142 Ga0495613_0024916 3300046689 Bacteria 4457
143 Ga0495674_0009277 3300047319 Bacteria 9350
144 Ga0495684_0141426 3300047471 Unclassified 1804
145 Ga0496104_0292985 3300048907 Bacteria 1540
146 Ga0496108_0409705 3300048911 Bacteria 1184
147 Ga0496109_0516180 3300048912 Unclassified 1128
148 Ga0496111_0349119 3300048914 Bacteria 1095
149 Ga0501031_0080328 3300049568 Unclassified 2126
150 Ga0501039_0114400 3300049575 Unclassified 2111
151 Ga0501039_0450942 3300049575 Unclassified 1010
152 Ga0501040_0208784 3300049576 Bacteria 1388
153 Ga0501041_0041560 3300049577 Bacteria 2793
154 Ga0501041_0041618 3300049577 Unclassified 2791
155 Ga0501041_0105326 3300049577 Bacteria 1748
156 Ga0501042_0029663 3300049578 Unclassified 3859
157 Ga0501042_0229584 3300049578 Bacteria 1339
158 Ga0501046_0134753 3300049580 Bacteria 1871
159 Ga0501046_0185090 3300049580 Bacteria 1556
160 Ga0501067_0023168 3300049583 Bacteria 3440
161 Ga0501068_0013945 3300049584 Bacteria 4584
162 Ga0501068_0241098 3300049584 Bacteria 1151
163 Ga0501071_0292950 3300049587 Bacteria 1233
164 Ga0501072_0017449 3300049588 Bacteria 5515
165 Ga0501072_0112388 3300049588 Bacteria 2169
166 Ga0501072_0161107 3300049588 Bacteria 1790
167 Ga0501075_0047927 3300049591 Unclassified 3211
168 Ga0501075_0109322 3300049591 Bacteria 2102
169 Ga0501075_0241006 3300049591 Bacteria 1378
170 Ga0501076_0055733 3300049592 Bacteria 3135
171 Ga0501079_0253336 3300049741 Bacteria 1376
172 Ga0501081_0078937 3300049743 Bacteria 2302
173 Ga0501081_0163999 3300049743 Bacteria 1602
174 Ga0501081_0270136 3300049743 Bacteria 1244
175 Ga0501083_0272294 3300049744 Unclassified 1102
176 Ga0501035_0392413 3300049822 Bacteria 1156
177 Ga0501045_0222788 3300049824 Bacteria 1404
178 Ga0501045_0232759 3300049824 Bacteria 1371
179 nmdc:mga09592_17134_c1 3300050508 Bacteria 5932
180 nmdc:mga09592_39464_c1 3300050508 Bacteria 3966
181 nmdc:mga09592_64346_c1 3300050508 Bacteria 3104
182 nmdc:mga09592_8475_c1 3300050508 Bacteria 8361
183 nmdc:mga0qj67_4138_c1 3300050509 Bacteria 10516
184 nmdc:mga0qj67_443692_c1 3300050509 Bacteria 1046
185 nmdc:mga06r32_19671_c1 3300050510 Bacteria 6202
186 nmdc:mga06r32_462174_c1 3300050510 Bacteria 1248
187 nmdc:mga0n895_88694_c1 3300050512 Bacteria 3093
188 nmdc:mga0a205_106915_c1 3300050515 Unclassified 2695
189 Ga0495595_0324645 3300053084 Bacteria 775
190 Ga0590074_001066 3300059423 Bacteria 4311
191 Ga0590077_011599 3300059426 Bacteria 1820
192 Ga0501082_0101215 3300060353 Bacteria 2492
193 Ga0501082_0239731 3300060353 Unclassified 1578
194 Ga0501082_0740425 3300060353 Bacteria 860
195 Ga0530510_0009404 3300061734 Bacteria 6854
196 Ga0530510_0062229 3300061734 Bacteria 2702
197 Ga0070699_100255668
198 JGI25406J46586_10007763
199 Ga0065707_10084681
200 Ga0070683_100188319
201 Ga0070713_100093844
202 Ga0070694_100078299
203 Ga0070694_100332507
204 Ga0070706_100227741
205 Ga0070698_100044626
206 Ga0070698_100406009
207 Ga0070699_100002030
208 Ga0070697_100318785
209 Ga0070696_100021179
210 Ga0070704_100019740
211 Ga0070704_100448439
212 Ga0068857_100525121
213 Ga0068864_100117587
214 Ga0068863_100101773
215 Ga0068863_100139194
216 Ga0068858_100063865
217 Ga0068862_100064269
218 Ga0068862_100308619
219 Ga0081539_10002067
220 Ga0081539_10011517
221 Ga0097621_100166442
222 Ga0068871_100075326
223 Ga0068871_100412866
224 Ga0075428_100032091
225 Ga0075428_100107007
226 Ga0075430_100021612
227 Ga0075430_100427469
228 Ga0075431_100057249
229 Ga0075431_100200860
230 Ga0075431_100498569
231 Ga0075434_100075913
232 Ga0075429_100053931
233 Ga0075429_100054962
234 Ga0075435_100067381
235 Ga0114129_10004481
236 Ga0114129_10056898
237 Ga0114129_10414270
238 Ga0105243_10327020
239 Ga0105242_10267366
240 Ga0105249_10030652
241 Ga0105249_10046628
242 Ga0157374_10340945
243 Ga0157372_10228309
244 Ga0157375_10173678
245 Ga0163163_10062899
246 Ga0163163_10156872
247 Ga0157380_10051161
248 Ga0157380_10541893
249 Ga0157376_10220149
250 Ga0163161_10054325
251 Ga0207643_10103444
252 Ga0207684_10528572
253 Ga0207646_10433167
254 Ga0207669_10229871
255 Ga0207712_10005995
256 Ga0207703_10133670
257 Ga0207641_10359124
258 Ga0207676_10460186
259 Ga0209968_1004607
260 Ga0209999_1019995
261 Ga0268265_10055009
262 Ga0265326_10025242
263 Ga0265326_10070880
264 Ga0265319_1000771
265 Ga0265319_1006537
266 Ga0265334_10001884
267 Ga0265318_10001482
268 Ga0265318_10022853
269 Ga0265318_10031029
270 Ga0265318_10046246
271 Ga0265322_10012332
272 Ga0265336_10006147
273 Ga0265338_10081954
274 Ga0265338_10290325
275 Ga0265324_10099855
276 Ga0265332_10027277
277 Ga0265332_10115866
278 Ga0265320_10002034
279 Ga0265320_10020506
280 Ga0265325_10017602
281 Ga0265340_10007025
282 Ga0265339_10030830
283 Ga0265339_10051361
284 Ga0265339_10076967
285 Ga0265331_10021489
286 Ga0265331_10028773
287 Ga0265316_10020375
288 Ga0265313_10024517
289 Ga0316575_10067219
290 Ga0316579_10000181
291 Ga0265314_10004230
292 Ga0265314_10020359
293 Ga0316576_10022354
294 Ga0316578_10028562
295 Ga0316578_10037399
296 Ga0316577_10001297
297 Ga0316577_10021075
298 Ga0316577_10032207
299 Ga0307407_10251742
300 Ga0316585_10013117
301 Ga0316574_0000328
302 Ga0316574_0000626
303 Ga0373933_0103967
304 Ga0373937_0013182
305 Ga0373937_0027254
306 Ga0316582_0002861
307 Ga0316582_0004095
308 Ga0316582_0014394
309 Ga0316582_0093686
310 Ga0316582_0105801
311 Ga0316584_0042641
312 Ga0316584_0132118
313 Ga0316581_0002192
314 Ga0400488_04730
315 Ga0400487_35020
316 Ga0436365_1569629
317 Ga0439457_037880
318 Ga0451577_0015997
319 Ga0451577_0127168
320 Ga0451577_0128963
321 Ga0453683_0031273
322 Ga0453684_0000012
323 Ga0453684_0000718
324 Ga0453684_0002198
325 Ga0453684_0005144
326 Ga0453684_0035525
327 Ga0453684_0043392
328 Ga0453684_0386367
329 Ga0495592_0009623
330 Ga0495603_0103042
331 Ga0495629_0013900
332 Ga0495580_0131129
333 Ga0495608_0014105
334 Ga0495608_0023872
335 Ga0495618_0038498
336 Ga0495667_0125238
337 Ga0495599_0238638
338 Ga0495613_0024916
339 Ga0495674_0009277
340 Ga0495684_0141426
341 Ga0496104_0292985
342 Ga0496108_0409705
343 Ga0496109_0516180
344 Ga0496111_0349119
345 Ga0501031_0080328
346 Ga0501039_0114400
347 Ga0501039_0450942
348 Ga0501040_0208784
349 Ga0501041_0041560
350 Ga0501041_0041618
351 Ga0501041_0105326
352 Ga0501042_0029663
353 Ga0501042_0229584
354 Ga0501046_0134753
355 Ga0501046_0185090
356 Ga0501067_0023168
357 Ga0501068_0013945
358 Ga0501068_0241098
359 Ga0501071_0292950
360 Ga0501072_0017449
361 Ga0501072_0112388
362 Ga0501072_0161107
363 Ga0501075_0047927
364 Ga0501075_0109322
365 Ga0501075_0241006
366 Ga0501076_0055733
367 Ga0501079_0253336
368 Ga0501081_0078937
369 Ga0501081_0163999
370 Ga0501081_0270136
371 Ga0501083_0272294
372 Ga0501035_0392413
373 Ga0501045_0222788
374 Ga0501045_0232759
375 nmdc:mga09592_17134_c1
376 nmdc:mga09592_39464_c1
377 nmdc:mga09592_64346_c1
378 nmdc:mga09592_8475_c1
379 nmdc:mga0qj67_4138_c1
380 nmdc:mga0qj67_443692_c1
381 nmdc:mga06r32_19671_c1
382 nmdc:mga06r32_462174_c1
383 nmdc:mga0n895_88694_c1
384 nmdc:mga0a205_106915_c1
385 Ga0495595_0324645
386 Ga0590074_001066
387 Ga0590077_011599
388 Ga0501082_0101215
389 Ga0501082_0239731
390 Ga0501082_0740425
391 Ga0530510_0009404
392 Ga0530510_0062229

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01061

ABC2_membrane

ABC-2 type transporter

60

262

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
6m96-assembly1.cif.gz_B-2 atp-bound conformation of the wzmwzt o antigen abc transporter 0.7524 21 280
6oih-assembly1.cif.gz_D crystal structure of o-antigen polysaccharide abc-transporter 0.7464 16 280
7k2t-assembly1.cif.gz_B mg2+/atp-bound structure of the full-length wzmwzt o antigen abc transporter in lipid nanodiscs 0.7429 18 280
6oih-assembly1.cif.gz_D crystal structure of o-antigen polysaccharide abc-transporter 0.7388 16 280
6m96-assembly1.cif.gz_B-2 atp-bound conformation of the wzmwzt o antigen abc transporter 0.7373 21 280
ID Description Score Start End Superfamily
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.7602 69 265 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.7582 69 266 3.40.1710.10
af_Q86P18_394_773_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5476 69 266 3.40.1710.10
af_A0A2R8QMX4_332_689_3.40.1710.10 Alpha Beta;3-Layer(aba) Sandwich;abc type-2 transporter like fold;abc type-2 transporter like domain 0.5446 69 265 3.40.1710.10
af_I1KZ04_198_383_1.20.120.1770 Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); 0.3527 68 280 1.20.120.1770
ID Description Score Start End GO Terms
AF-A0A0P6X174-F1-model_v4 Transport permease protein 0.9628 23 284 GO:0043190
GO:0140359
AF-A0A1F8SCH7-F1-model_v4 Transport permease protein 0.9619 20 277 GO:0043190
GO:0140359
AF-A0A533S2H2-F1-model_v4 ABC transporter permease 0.9586 104 284 GO:0016020
GO:0140359
AF-E8N2C3-F1-model_v4 Transport permease protein 0.9567 9 284 GO:0043190
GO:0140359
AF-A0A0P6X174-F1-model_v4 Transport permease protein 0.9556 23 284 GO:0043190
GO:0140359

Map