F298959

General Info

Members Datasets Scaffolds Average Seq Length
194 122 388 499

Family's Representative Sequence

Representative Sequence 3300039062|Ga0400483_276500|Ga0400483_276500_305_1888
Length 527
Sequence MQEVGLTIFISGPGLNRGRHWICRLAVGIDWIMDKTSDILQKRIEKIRGMKEQGVRLFPNDFSVTHTIGEIQERIEKDSSSITETEPVFTTAGRMMAINPFGKSTFIRFKDRSGQLQAYVRKDKIGDDGYAFFKQLDIGDFVGLSGPMFQTRTGEWTLLVEDLTLLCKATRPLPEKFHGLKDPEKRYRQRYVDLIMNPDVRDLFVKRSRIIQTVRNFLLELDFLEVETPMMQPIPGGAEATPFVTHHNALDMDLFLRIAPELYLKRLVVGGFERVFEINRSFRNEGVSTRHNPEFTMIEFYQAYATYHDLMDLTEKLFARVAREVTGSETITYQGETINLGGTWKRIPMLEALTEIGGIDRSLLDDREGLLAFAREKGVKITKQDRLGKIITKLFDALVEPELVQPTFITGYPVEVSPLSRRSDAEPDLTERFELFVAGREIANGFSELNDPEDQLGRFQQQVADREAGDAEAHFMDKDYIEALEYGMPPTAGQGIGIDRLVMLLTDSPSIREVILFPHMKSKDQER

Samples

Sample ID Description Type Environment
1 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
15 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
28 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
32 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
33 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
56 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
57 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
58 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
59 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
60 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
61 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
62 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
66 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
67 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
68 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
69 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
70 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
71 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
72 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
73 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
74 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
75 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
76 3300038735 Seagrass microbial communities from Seahorse Key, FL, USA - SH0319 Metagenome Unclassified
77 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
78 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
79 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
80 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
81 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
82 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
83 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
84 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
86 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
87 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
97 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
98 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
99 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
100 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
101 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
102 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
103 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
104 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
105 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
106 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
107 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
108 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
109 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
112 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
113 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
114 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
115 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
116 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
117 2565956521 Vibrio rhizosphaerae DSM 18581 Isolate Rhizosphere
118 2648501241 Vibrio splendidus UCD-SED7 Isolate Rhizosphere
119 2651869818 Vibrio splendidus UCD-SED10 Isolate Rhizosphere
120 2740891818 Desulfofaba hansenii DSM 12642 Isolate Unclassified
121 2916178963 Pseudoalteromonas rhizosphaerae RA15 Isolate Rhizosphere
122 2919497567 Shewanella putrefaciens 3469 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.39
Metatranscriptomes 0.52
Isolates 3.09

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.52
Rhizosphere 83.51
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0400483_276500 3300039062 Bacteria 3754
2 Ga0065712_10002934 3300005290 Bacteria 9593
3 Ga0065715_10006911 3300005293 Bacteria 6117
4 Ga0065707_10001083 3300005295 Bacteria 18626
5 Ga0070680_100006383 3300005336 Bacteria 8957
6 Ga0070661_100007965 3300005344 Bacteria 7319
7 Ga0070668_100034546 3300005347 Bacteria 3854
8 Ga0070675_100024244 3300005354 Bacteria 4858
9 Ga0070675_100085952 3300005354 Bacteria 2628
10 Ga0070667_100037577 3300005367 Bacteria 4059
11 Ga0070694_100003632 3300005444 Bacteria 9211
12 Ga0070694_100057021 3300005444 Bacteria 2655
13 Ga0070681_10008219 3300005458 Bacteria 10212
14 Ga0070681_10243575 3300005458 Bacteria 1711
15 Ga0068867_100105961 3300005459 Bacteria 2153
16 Ga0070679_100010568 3300005530 Bacteria 8757
17 Ga0070696_100003810 3300005546 Bacteria 10075
18 Ga0070693_100023454 3300005547 Bacteria 3298
19 Ga0068855_100061367 3300005563 Bacteria 4393
20 Ga0070664_100039587 3300005564 Bacteria 3972
21 Ga0068856_100030539 3300005614 Bacteria 5267
22 Ga0068864_100066362 3300005618 Bacteria 3132
23 Ga0068860_100045538 3300005843 Bacteria 4184
24 Ga0075428_100008553 3300006844 Bacteria 11355
25 Ga0075430_100121719 3300006846 Bacteria 2175
26 Ga0075431_100020093 3300006847 Bacteria 6821
27 Ga0075433_10005452 3300006852 Bacteria 9995
28 Ga0075433_10080179 3300006852 Bacteria 2877
29 Ga0075434_100076538 3300006871 Bacteria 3341
30 Ga0068865_100023089 3300006881 Bacteria 4068
31 Ga0075435_100015683 3300007076 Bacteria 5700
32 Ga0111539_10126484 3300009094 Bacteria 2994
33 Ga0114129_10037389 3300009147 Bacteria 6854
34 Ga0114129_10048026 3300009147 Bacteria 5997
35 Ga0114129_10074276 3300009147 Bacteria 4736
36 Ga0114129_10098233 3300009147 Bacteria 4053
37 Ga0114129_10159237 3300009147 Bacteria 3086
38 Ga0105241_10009192 3300009174 Bacteria 7273
39 Ga0157374_10011918 3300013296 Bacteria 7545
40 Ga0157376_10009968 3300014969 Bacteria 6933
41 Ga0207697_10012089 3300025315 Bacteria 3634
42 Ga0207647_10058104 3300025904 Bacteria 2369
43 Ga0207645_10000345 3300025907 Bacteria 38809
44 Ga0207707_10012481 3300025912 Bacteria 7386
45 Ga0207657_10003821 3300025919 Bacteria 15994
46 Ga0207649_10008677 3300025920 Bacteria 5551
47 Ga0207652_10024310 3300025921 Bacteria 5026
48 Ga0207652_10025196 3300025921 Bacteria 4942
49 Ga0207650_10000495 3300025925 Bacteria 32814
50 Ga0207659_10095791 3300025926 Bacteria 2227
51 Ga0207706_10004544 3300025933 Bacteria 13025
52 Ga0207706_10177377 3300025933 Bacteria 1872
53 Ga0207704_10015802 3300025938 Bacteria 3859
54 Ga0207691_10003747 3300025940 Bacteria 14743
55 Ga0207679_10002179 3300025945 Bacteria 12114
56 Ga0207667_10077114 3300025949 Bacteria 3457
57 Ga0207678_10034785 3300026067 Bacteria 4388
58 Ga0207702_10058834 3300026078 Bacteria 3271
59 Ga0207648_10029793 3300026089 Bacteria 4840
60 Ga0207683_10001057 3300026121 Bacteria 25089
61 Ga0210002_1004191 3300027617 Bacteria 2138
62 Ga0209983_1004127 3300027665 Bacteria 3067
63 Ga0209974_10001329 3300027876 Bacteria 8888
64 Ga0268264_10125307 3300028381 Bacteria 2269
65 Ga0307408_100003798 3300031548 Bacteria 10292
66 Ga0316575_10001309 3300031665 Bacteria 7950
67 Ga0316575_10003616 3300031665 Bacteria 5361
68 Ga0316575_10006835 3300031665 Bacteria 4122
69 Ga0316579_10003279 3300031691 Bacteria 6283
70 Ga0316579_10009076 3300031691 Bacteria 4173
71 Ga0316576_10000448 3300031727 Bacteria 19226
72 Ga0316576_10004496 3300031727 Bacteria 8379
73 Ga0316576_10046660 3300031727 Bacteria 3137
74 Ga0316576_10104172 3300031727 Bacteria 2123
75 Ga0316576_10134755 3300031727 Bacteria 1859
76 Ga0316578_10001210 3300031728 Bacteria 10250
77 Ga0316578_10020271 3300031728 Bacteria 3671
78 Ga0316578_10062231 3300031728 Bacteria 2200
79 Ga0316577_10001068 3300031733 Bacteria 12410
80 Ga0316577_10003210 3300031733 Bacteria 8222
81 Ga0316577_10014095 3300031733 Bacteria 4387
82 Ga0316577_10016585 3300031733 Bacteria 4063
83 Ga0316577_10065397 3300031733 Bacteria 2030
84 Ga0316577_10096484 3300031733 Bacteria 1656
85 Ga0307410_10026983 3300031852 Bacteria 3624
86 Ga0307412_10015271 3300031911 Bacteria 4548
87 Ga0307416_100034295 3300032002 Bacteria 3860
88 Ga0307416_100059273 3300032002 Bacteria 3110
89 Ga0307416_100165955 3300032002 Bacteria 2048
90 Ga0307414_10039186 3300032004 Bacteria 3190
91 Ga0316583_10007475 3300032133 Bacteria 3933
92 Ga0316583_10033485 3300032133 Bacteria 1825
93 Ga0316585_10017518 3300032137 Bacteria 2166
94 Ga0316580_10007238 3300032139 Bacteria 3299
95 Ga0316596_1004880 3300033541 Bacteria 3031
96 Ga0316574_0005217 3300035398 Bacteria 6907
97 Ga0316574_0035509 3300035398 Bacteria 3047
98 Ga0316582_0001373 3300036647 Bacteria 10597
99 Ga0316582_0012344 3300036647 Bacteria 4763
100 Ga0316584_0005944 3300036712 Bacteria 8236
101 Ga0316584_0008641 3300036712 Bacteria 7024
102 Ga0316584_0014091 3300036712 Bacteria 5679
103 Ga0316584_0105342 3300036712 Bacteria 2110
104 Ga0316581_0002434 3300037588 Bacteria 4452
105 Ga0400484_16317 3300038725 Bacteria 4322
106 Ga0400484_30374 3300038725 Bacteria 9271
107 Ga0400490_48394 3300038726 Bacteria 125152
108 Ga0400491_25462 3300038727 Bacteria 2339
109 Ga0400485_03897 3300038735 Bacteria 31578
110 Ga0400485_12823 3300038735 Bacteria 26460
111 Ga0400485_16026 3300038735 Bacteria 25797
112 Ga0400488_21618 3300038741 Bacteria 7590
113 Ga0400488_58911 3300038741 Bacteria 12893
114 Ga0400486_16900 3300038742 Bacteria 50943
115 Ga0400486_25213 3300038742 Bacteria 25868
116 Ga0400486_27903 3300038742 Bacteria 26140
117 Ga0400486_28541 3300038742 Bacteria 20055
118 Ga0400486_31935 3300038742 Bacteria 34901
119 Ga0400483_009655 3300039062 Bacteria 210585
120 Ga0400483_024038 3300039062 Bacteria 7343
121 Ga0400483_055135 3300039062 Bacteria 3242
122 Ga0400483_165264 3300039062 Bacteria 38821
123 Ga0400483_232799 3300039062 Bacteria 5449
124 Ga0400483_247331 3300039062 Bacteria 2534
125 Ga0400483_268580 3300039062 Bacteria 1423
126 Ga0400483_269875 3300039062 Bacteria 7938
127 Ga0400489_57759 3300039093 Bacteria 16220
128 Ga0400489_62502 3300039093 Bacteria 16225
129 Ga0400489_80261 3300039093 Bacteria 10535
130 Ga0400489_85973 3300039093 Bacteria 60013
131 Ga0400487_01737 3300039110 Bacteria 3567
132 Ga0400487_20687 3300039110 Bacteria 29301
133 Ga0453684_0000172 3300044712 Bacteria 285975
134 Ga0453684_0003128 3300044712 Bacteria 38115
135 Ga0453684_0120847 3300044712 Bacteria 3163
136 Ga0453684_0147333 3300044712 Bacteria 2802
137 Ga0451576_0062869 3300045051 Bacteria 3869
138 Ga0451576_0128398 3300045051 Bacteria 2642
139 Ga0496106_0029518 3300048909 Bacteria 4087
140 Ga0501031_0007782 3300049568 Bacteria 6973
141 Ga0501033_0038340 3300049570 Bacteria 3584
142 Ga0501033_0047386 3300049570 Bacteria 3195
143 Ga0501034_0014428 3300049571 Bacteria 8135
144 Ga0501036_0049250 3300049572 Bacteria 3567
145 Ga0501037_0014241 3300049573 Bacteria 5858
146 Ga0501038_0000525 3300049574 Bacteria 33639
147 Ga0501038_0014049 3300049574 Bacteria 7296
148 Ga0501039_0000398 3300049575 Bacteria 31217
149 Ga0501040_0000123 3300049576 Bacteria 41449
150 Ga0501041_0003572 3300049577 Bacteria 8952
151 Ga0501041_0017513 3300049577 Bacteria 4262
152 Ga0501042_0001779 3300049578 Bacteria 12898
153 Ga0501043_0006165 3300049579 Bacteria 9631
154 Ga0501046_0003927 3300049580 Bacteria 13598
155 Ga0501046_0008905 3300049580 Bacteria 8711
156 Ga0501069_0006048 3300049585 Bacteria 6319
157 Ga0501071_0000404 3300049587 Bacteria 21355
158 Ga0501072_0000568 3300049588 Bacteria 26584
159 Ga0501073_0005350 3300049589 Bacteria 9624
160 Ga0501074_0001217 3300049590 Bacteria 16960
161 Ga0501075_0000284 3300049591 Bacteria 28081
162 Ga0501075_0017837 3300049591 Bacteria 5127
163 Ga0501076_0001217 3300049592 Bacteria 17117
164 Ga0501076_0021926 3300049592 Bacteria 4904
165 Ga0501077_0000342 3300049593 Bacteria 27536
166 Ga0501077_0070917 3300049593 Bacteria 2208
167 Ga0501080_0034498 3300049742 Bacteria 4725
168 Ga0501081_0000333 3300049743 Bacteria 25367
169 Ga0501035_0007245 3300049822 Bacteria 10379
170 Ga0501045_0023459 3300049824 Bacteria 4423
171 nmdc:mga05p37_16050_c1 3300050507 Bacteria 9013
172 nmdc:mga05p37_17375_c1 3300050507 Bacteria 8680
173 nmdc:mga05p37_26567_c1 3300050507 Bacteria 7040
174 nmdc:mga05p37_4208_c1 3300050507 Bacteria 16813
175 nmdc:mga05p37_54006_c1 3300050507 Bacteria 4943
176 nmdc:mga05p37_66241_c1 3300050507 Bacteria 4442
177 nmdc:mga06r32_18791_c1 3300050510 Bacteria 6333
178 nmdc:mga08y16_48543_c1 3300050511 Bacteria 4443
179 nmdc:mga0n895_38303_c1 3300050512 Bacteria 4644
180 nmdc:mga0n895_84559_c1 3300050512 Bacteria 3166
181 nmdc:mga0rr50_3256_c1 3300050513 Bacteria 9303
182 nmdc:mga0a205_1486_c1 3300050515 Bacteria 19984
183 nmdc:mga0a205_20032_c2 3300050515 Bacteria 2923
184 nmdc:mga0a205_91127_c1 3300050515 Bacteria 2945
185 Ga0501084_0000751 3300054114 Bacteria 24702
186 Ga0501082_0001356 3300060353 Bacteria 21538
187 Ga0530510_0001907 3300061734 Bacteria 14263
188 Ga0530510_0086518 3300061734 Bacteria 2283
189 2566036313 2565956521 Bacteria 4468993
190 2649121930 2648501241 Bacteria 5312320
191 2652976492 2651869818 Bacteria 5864031
192 2740991655 2740891818 Bacteria 6711283
193 2916181327 2916178963 Bacteria 5265078
194 2919498040 2919497567 Bacteria 4408621
195 Ga0400483_276500
196 Ga0065712_10002934
197 Ga0065715_10006911
198 Ga0065707_10001083
199 Ga0070680_100006383
200 Ga0070661_100007965
201 Ga0070668_100034546
202 Ga0070675_100024244
203 Ga0070675_100085952
204 Ga0070667_100037577
205 Ga0070694_100003632
206 Ga0070694_100057021
207 Ga0070681_10008219
208 Ga0070681_10243575
209 Ga0068867_100105961
210 Ga0070679_100010568
211 Ga0070696_100003810
212 Ga0070693_100023454
213 Ga0068855_100061367
214 Ga0070664_100039587
215 Ga0068856_100030539
216 Ga0068864_100066362
217 Ga0068860_100045538
218 Ga0075428_100008553
219 Ga0075430_100121719
220 Ga0075431_100020093
221 Ga0075433_10005452
222 Ga0075433_10080179
223 Ga0075434_100076538
224 Ga0068865_100023089
225 Ga0075435_100015683
226 Ga0111539_10126484
227 Ga0114129_10037389
228 Ga0114129_10048026
229 Ga0114129_10074276
230 Ga0114129_10098233
231 Ga0114129_10159237
232 Ga0105241_10009192
233 Ga0157374_10011918
234 Ga0157376_10009968
235 Ga0207697_10012089
236 Ga0207647_10058104
237 Ga0207645_10000345
238 Ga0207707_10012481
239 Ga0207657_10003821
240 Ga0207649_10008677
241 Ga0207652_10024310
242 Ga0207652_10025196
243 Ga0207650_10000495
244 Ga0207659_10095791
245 Ga0207706_10004544
246 Ga0207706_10177377
247 Ga0207704_10015802
248 Ga0207691_10003747
249 Ga0207679_10002179
250 Ga0207667_10077114
251 Ga0207678_10034785
252 Ga0207702_10058834
253 Ga0207648_10029793
254 Ga0207683_10001057
255 Ga0210002_1004191
256 Ga0209983_1004127
257 Ga0209974_10001329
258 Ga0268264_10125307
259 Ga0307408_100003798
260 Ga0316575_10001309
261 Ga0316575_10003616
262 Ga0316575_10006835
263 Ga0316579_10003279
264 Ga0316579_10009076
265 Ga0316576_10000448
266 Ga0316576_10004496
267 Ga0316576_10046660
268 Ga0316576_10104172
269 Ga0316576_10134755
270 Ga0316578_10001210
271 Ga0316578_10020271
272 Ga0316578_10062231
273 Ga0316577_10001068
274 Ga0316577_10003210
275 Ga0316577_10014095
276 Ga0316577_10016585
277 Ga0316577_10065397
278 Ga0316577_10096484
279 Ga0307410_10026983
280 Ga0307412_10015271
281 Ga0307416_100034295
282 Ga0307416_100059273
283 Ga0307416_100165955
284 Ga0307414_10039186
285 Ga0316583_10007475
286 Ga0316583_10033485
287 Ga0316585_10017518
288 Ga0316580_10007238
289 Ga0316596_1004880
290 Ga0316574_0005217
291 Ga0316574_0035509
292 Ga0316582_0001373
293 Ga0316582_0012344
294 Ga0316584_0005944
295 Ga0316584_0008641
296 Ga0316584_0014091
297 Ga0316584_0105342
298 Ga0316581_0002434
299 Ga0400484_16317
300 Ga0400484_30374
301 Ga0400490_48394
302 Ga0400491_25462
303 Ga0400485_03897
304 Ga0400485_12823
305 Ga0400485_16026
306 Ga0400488_21618
307 Ga0400488_58911
308 Ga0400486_16900
309 Ga0400486_25213
310 Ga0400486_27903
311 Ga0400486_28541
312 Ga0400486_31935
313 Ga0400483_009655
314 Ga0400483_024038
315 Ga0400483_055135
316 Ga0400483_165264
317 Ga0400483_232799
318 Ga0400483_247331
319 Ga0400483_268580
320 Ga0400483_269875
321 Ga0400489_57759
322 Ga0400489_62502
323 Ga0400489_80261
324 Ga0400489_85973
325 Ga0400487_01737
326 Ga0400487_20687
327 Ga0453684_0000172
328 Ga0453684_0003128
329 Ga0453684_0120847
330 Ga0453684_0147333
331 Ga0451576_0062869
332 Ga0451576_0128398
333 Ga0496106_0029518
334 Ga0501031_0007782
335 Ga0501033_0038340
336 Ga0501033_0047386
337 Ga0501034_0014428
338 Ga0501036_0049250
339 Ga0501037_0014241
340 Ga0501038_0000525
341 Ga0501038_0014049
342 Ga0501039_0000398
343 Ga0501040_0000123
344 Ga0501041_0003572
345 Ga0501041_0017513
346 Ga0501042_0001779
347 Ga0501043_0006165
348 Ga0501046_0003927
349 Ga0501046_0008905
350 Ga0501069_0006048
351 Ga0501071_0000404
352 Ga0501072_0000568
353 Ga0501073_0005350
354 Ga0501074_0001217
355 Ga0501075_0000284
356 Ga0501075_0017837
357 Ga0501076_0001217
358 Ga0501076_0021926
359 Ga0501077_0000342
360 Ga0501077_0070917
361 Ga0501080_0034498
362 Ga0501081_0000333
363 Ga0501035_0007245
364 Ga0501045_0023459
365 nmdc:mga05p37_16050_c1
366 nmdc:mga05p37_17375_c1
367 nmdc:mga05p37_26567_c1
368 nmdc:mga05p37_4208_c1
369 nmdc:mga05p37_54006_c1
370 nmdc:mga05p37_66241_c1
371 nmdc:mga06r32_18791_c1
372 nmdc:mga08y16_48543_c1
373 nmdc:mga0n895_38303_c1
374 nmdc:mga0n895_84559_c1
375 nmdc:mga0rr50_3256_c1
376 nmdc:mga0a205_1486_c1
377 nmdc:mga0a205_20032_c2
378 nmdc:mga0a205_91127_c1
379 Ga0501084_0000751
380 Ga0501082_0001356
381 Ga0530510_0001907
382 Ga0530510_0086518
383 2566036313
384 2649121930
385 2652976492
386 2740991655
387 2916181327
388 2919498040

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01336

tRNA_anti-codon

OB-fold nucleic acid binding domain

89

166

0.97

PF00152

tRNA-synt_2

tRNA synthetases class II (D, K and N)

182

521

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
4gop-assembly2.cif.gz_Y structure and conformational change of a replication protein a heterotrimer bound to ssdna 0.891 63 142
3kf6-assembly1.cif.gz_A crystal structure of s. pombe stn1-ten1 complex 0.8786 63 143
3kdf-assembly3.cif.gz_D x-ray crystal structure of the human replication protein a complex from wheat germ cell free expression 0.8765 63 143
5ol2-assembly2.cif.gz_E the electron transferring flavoprotein/butyryl-coa dehydrogenase complex from clostridium difficile 0.8671 71 98
5gro-assembly1.cif.gz_B crystal structure of the n-terminal anticodon-binding domain of non-discriminating aspartyl-trna synthetase from helicobacter pylori 0.8609 64 142
ID Description Score Start End Superfamily
3a74A01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9379 14 152 2.40.50.140
4ex5B01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.927 16 151 2.40.50.140
3a74A01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9189 14 152 2.40.50.140
af_Q2FYH6_1_101_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9069 65 145 2.40.50.140
af_Q8LFJ8_38_167_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9036 64 142 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A7T0BRK5-F1-model_v4 Aminoacyl-tRNA synthetase class II (D/K/N) domain-containing protein 0.964 372 492 GO:0000049
GO:0004824
GO:0005524
GO:0005829
GO:0006430
AF-A0A3S0BMC4-F1-model_v4 Lysine--tRNA ligase 0.9622 361 499 GO:0000049
GO:0004824
GO:0005524
GO:0005829
GO:0006430
AF-A0A7C7UGP5-F1-model_v4 Lysine--tRNA ligase 0.9542 369 499 GO:0000049
GO:0004824
GO:0005524
GO:0005829
GO:0006430
AF-A0A497P9Y3-F1-model_v4 Lysine--tRNA ligase (EC 6.1.1.6) 0.954 10 140 GO:0000049
GO:0000166
GO:0004824
GO:0005829
GO:0006430
AF-A0A348ZJ61-F1-model_v4 Lysine--tRNA ligase 0.9522 340 499 GO:0000049
GO:0004824
GO:0005524
GO:0005829
GO:0006430

Map