F296386

General Info

Members Datasets Scaffolds Average Seq Length
192 147 384 299

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2599185292|2599904645
Length 318
Sequence VDQMEEKIMRELVLQCSEAQAEALSDALLEAGVLSVSVEDADFGTDVERPLFGEPGTEPDVQAWDRNRVVALLPDGADPAQIMEEAAQVGELDPAVFDGWTLRDVPDADWVRLTQSQFGPIHIAERLWIVPSWHRDNPDVPGLDAAAVPDQAGAIHIELDPGLAFGTGSHPTTHLCLAWLEAELPAGATLLDYGCGSGILAIAARKLGAGPTQAVDIDAQAVQSTAFNAEVNKVELQAMLPDALADGTFEVVVANILSNPLKVLAPMLAGRVAAGGHLVLSGVLERQAEEVAAAYAPWLAMSVWRARDGWVCLHGRKP

Samples

Sample ID Description Type Environment
1 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
2 3300003574 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
4 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
5 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
6 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
7 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
8 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
9 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
16 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
17 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
18 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
19 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
20 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
21 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
22 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
25 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
26 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
27 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
28 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
29 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
30 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
31 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
32 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
33 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
34 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
35 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
36 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
38 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
49 3300027526 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 AM (SPAdes) (version 2) Metagenome Rhizosphere
50 3300027695 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
53 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
54 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
55 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
56 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
57 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
58 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
59 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
60 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
61 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
62 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
63 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
64 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
65 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
66 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
67 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
68 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
69 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
70 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
71 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
72 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
73 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
76 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
77 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
78 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
79 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
80 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
81 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
82 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
83 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
84 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
85 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
86 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
87 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
88 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
89 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
90 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
91 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
92 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
93 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
94 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
95 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
96 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
97 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
98 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
99 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
100 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
101 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
102 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
103 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
104 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
116 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
117 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
118 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
119 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
120 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
121 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
122 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
123 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
124 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
125 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
126 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
127 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
128 2599185292 Achromobacter sp. NFACC18-2 Isolate Rhizoplane
129 2643221569 Achromobacter sp. Root565 Isolate Unclassified
130 2643221594 Achromobacter sp. Root170 Isolate Unclassified
131 2643221621 Achromobacter sp. Root83 Isolate Unclassified
132 2643221660 Methylibium sp. Root1272 Isolate Unclassified
133 2739367655 Pusillimonas sp. YR330 Isolate Unclassified
134 2808606395 Achromobacter sp. SLBN-14 Isolate Unclassified
135 2831864461 Roseateles noduli HZ7 Isolate Nodule
136 2855730933 Achromobacter sp. HZ28 Isolate Nodule
137 2855767633 Achromobacter sp. HZ34 Isolate Nodule
138 2857537821 Achromobacter sp. R-71975 Isolate Unclassified
139 2857576091 Pigmentiphaga sp. R-72090 Isolate Unclassified
140 2858950400 Achromobacter sp. K91 Isolate Unclassified
141 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
142 2881927736 Candidimonas sp. SYP-B2681 Isolate Rhizosphere
143 2887375801 Parapusillimonas sp. SGNA-6 Isolate Rhizosphere
144 2895511927 Pseudoxanthomonas sp. SGD-5-1 Isolate Rhizosphere
145 2941479691
146 8048746797 Alcaligenes endophyticus DSM 100498 Isolate Unclassified
147 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.5
Metatranscriptomes 2.08
Isolates 10.42

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.5
Nodule 2.6
Rhizoplane 6.25
Rhizosphere 59.9
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25151J46595_10000137 3300003187 Bacteria 96370
2 Ga0007410J51695_1047553 3300003574 Bacteria 1913
3 Ga0007409J51694_1023236 3300003575 Bacteria 4958
4 Ga0007416J51690_1023564 3300003577 Bacteria 5120
5 Ga0032354_1043026 3300003693 Bacteria 5023
6 Ga0055529_1001284 3300003763 Bacteria 8814
7 Ga0055524_1000109 3300003775 Bacteria 100308
8 Ga0070676_10002353 3300005328 Bacteria 9679
9 Ga0070661_100010308 3300005344 Bacteria 6496
10 Ga0070673_100523556 3300005364 Bacteria 1075
11 Ga0070659_100319720 3300005366 Bacteria 1297
12 Ga0070667_100010447 3300005367 Bacteria 7665
13 Ga0070663_100000198 3300005455 Bacteria 29990
14 Ga0070663_100197277 3300005455 Bacteria 1569
15 Ga0068857_100284526 3300005577 Bacteria 1521
16 Ga0075368_10071575 3300006042 Bacteria 1401
17 Ga0075364_10011166 3300006051 Bacteria 5451
18 Ga0075366_10001740 3300006195 Bacteria 10952
19 Ga0075366_10016355 3300006195 Bacteria 4264
20 Ga0075370_10008610 3300006353 Bacteria 5259
21 Ga0075433_10109640 3300006852 Bacteria 2449
22 Ga0075429_100001780 3300006880 Bacteria 17837
23 Ga0079104_1000001 3300006946 Bacteria 521847
24 Ga0105245_10295192 3300009098 Bacteria 1588
25 Ga0105243_10407556 3300009148 Bacteria 1265
26 Ga0105248_10017366 3300009177 Bacteria 7932
27 Ga0157375_10538675 3300013308 Bacteria 1330
28 Ga0163161_10196208 3300017792 Bacteria 1554
29 Ga0213872_10000081 3300021361 Bacteria 88397
30 Ga0213872_10000104 3300021361 Bacteria 78306
31 Ga0213872_10001145 3300021361 Bacteria 18070
32 Ga0209258_105038 3300025242 Bacteria 2340
33 Ga0209565_1015226 3300025263 Bacteria 1740
34 Ga0209455_1000350 3300025272 Bacteria 43198
35 Ga0209673_1023729 3300025273 Bacteria 2080
36 Ga0209675_1008682 3300025291 Bacteria 3693
37 Ga0209676_1003523 3300025292 Bacteria 9547
38 Ga0209025_1000071 3300025294 Bacteria 287297
39 Ga0209564_1000008 3300025295 Bacteria 953227
40 Ga0209050_1003404 3300025298 Bacteria 11791
41 Ga0209050_1021867 3300025298 Bacteria 2313
42 Ga0209256_1000015 3300025299 Bacteria 622953
43 Ga0207657_10000350 3300025919 Bacteria 48975
44 Ga0207649_10009525 3300025920 Bacteria 5317
45 Ga0207690_10001117 3300025932 Bacteria 17115
46 Ga0207706_10261457 3300025933 Bacteria 1511
47 Ga0207709_10075092 3300025935 Bacteria 2159
48 Ga0207711_10013604 3300025941 Bacteria 6760
49 Ga0207679_10000678 3300025945 Bacteria 22830
50 Ga0207658_10009698 3300025986 Bacteria 6536
51 Ga0207639_10043419 3300026041 Bacteria 3375
52 Ga0207678_10200361 3300026067 Bacteria 1707
53 Ga0209281_1000057 3300027111 Bacteria 307145
54 Ga0209968_1000857 3300027526 Bacteria 4719
55 Ga0209966_1000138 3300027695 Bacteria 30805
56 Ga0268266_10132799 3300028379 Bacteria 2228
57 Ga0307515_10005665 3300028794 Bacteria 25226
58 Ga0265327_10072796 3300031251 Bacteria 1716
59 Ga0307513_10228296 3300031456 Bacteria 1676
60 Ga0307509_10044554 3300031507 Bacteria 4792
61 Ga0307509_10317385 3300031507 Bacteria 1297
62 Ga0307508_10231965 3300031616 Bacteria 1444
63 Ga0307516_10000419 3300031730 Bacteria 55599
64 Ga0307412_10000137 3300031911 Bacteria 53231
65 Ga0307412_10085091 3300031911 Bacteria 2197
66 Ga0307507_10053220 3300033179 Bacteria 3870
67 Ga0395899_0001209 3300037312 Bacteria 22646
68 Ga0395900_0000058 3300037418 Bacteria 206785
69 Ga0395900_0003080 3300037418 Bacteria 18130
70 Ga0395900_0003827 3300037418 Bacteria 16092
71 Ga0395898_0005866 3300037466 Bacteria 13211
72 Ga0395898_0184610 3300037466 Bacteria 1993
73 Ga0395905_0051424 3300037471 Bacteria 3859
74 Ga0395901_0005490 3300038443 Bacteria 12847
75 Ga0395901_0019567 3300038443 Bacteria 6919
76 Ga0436361_0107660 3300039447 Bacteria 63286
77 Ga0436361_0811061 3300039447 Bacteria 135576
78 Ga0439431_0000761 3300041997 Bacteria 6971
79 Ga0450896_009355 3300042133 Bacteria 1364
80 Ga0439434_0064653 3300042435 Bacteria 1147
81 Ga0466972_0061187 3300044658 Bacteria 1806
82 Ga0466965_0022511 3300044683 Bacteria 3037
83 Ga0466966_0061276 3300044684 Bacteria 2373
84 Ga0466963_0004173 3300044694 Bacteria 8365
85 Ga0466964_0004584 3300044706 Bacteria 5110
86 Ga0453684_0050548 3300044712 Bacteria 5466
87 Ga0466970_0023384 3300044765 Bacteria 3227
88 Ga0466970_0140985 3300044765 Bacteria 1328
89 Ga0466957_0023435 3300044842 Bacteria 3649
90 Ga0466957_0048752 3300044842 Bacteria 2574
91 Ga0466957_0067399 3300044842 Bacteria 2208
92 Ga0466960_0027445 3300044901 Bacteria 2597
93 Ga0466959_0000496 3300045049 Bacteria 22885
94 Ga0451576_0178246 3300045051 Bacteria 2219
95 Ga0451576_0189376 3300045051 Bacteria 2148
96 Ga0495607_0000077 3300046501 Bacteria 99190
97 Ga0495633_0004494 3300046558 Bacteria 8840
98 Ga0495658_0058314 3300046683 Bacteria 2208
99 Ga0495626_0100908 3300048091 Bacteria 1258
100 Ga0496100_0130698 3300048903 Bacteria 1768
101 Ga0496101_0101787 3300048904 Bacteria 2151
102 Ga0496104_0158096 3300048907 Bacteria 2175
103 Ga0496105_0241612 3300048908 Bacteria 1465
104 Ga0496108_0552811 3300048911 Bacteria 1004
105 Ga0496109_0178785 3300048912 Bacteria 1992
106 Ga0496110_0309101 3300048913 Bacteria 1440
107 Ga0496112_0004682 3300048915 Bacteria 11639
108 Ga0496113_0042761 3300048916 Bacteria 3349
109 Ga0496114_0013903 3300048917 Bacteria 6453
110 Ga0496114_0020908 3300048917 Bacteria 5316
111 Ga0496116_0018089 3300048919 Bacteria 5445
112 Ga0496116_0136946 3300048919 Bacteria 1384
113 Ga0496117_0011084 3300048920 Bacteria 8111
114 Ga0496117_0185625 3300048920 Bacteria 1190
115 Ga0496118_0011498 3300048921 Bacteria 8629
116 Ga0496118_0164506 3300048921 Bacteria 1365
117 Ga0496120_0001170 3300048923 Bacteria 33548
118 Ga0496121_0002222 3300048924 Bacteria 30310
119 Ga0496121_0019846 3300048924 Bacteria 6694
120 Ga0496122_0001897 3300048925 Bacteria 31637
121 Ga0496123_0048231 3300048926 Bacteria 2867
122 Ga0496123_0082028 3300048926 Bacteria 1957
123 Ga0496124_0178312 3300048927 Bacteria 1638
124 Ga0496125_0000096 3300048928 Bacteria 205618
125 Ga0496125_0005116 3300048928 Bacteria 14761
126 Ga0496125_0015623 3300048928 Bacteria 7327
127 Ga0496126_0458740 3300048929 Bacteria 1024
128 Ga0501031_0001760 3300049568 Bacteria 13585
129 Ga0501031_0128915 3300049568 Bacteria 1652
130 Ga0501031_0172053 3300049568 Bacteria 1415
131 Ga0501032_0001745 3300049569 Bacteria 17187
132 Ga0501033_0003409 3300049570 Bacteria 13089
133 Ga0501033_0024508 3300049570 Bacteria 4551
134 Ga0501033_0031411 3300049570 Bacteria 3991
135 Ga0501034_0007877 3300049571 Bacteria 11323
136 Ga0501034_0038646 3300049571 Bacteria 4833
137 Ga0501034_0243360 3300049571 Bacteria 1744
138 Ga0501036_0000045 3300049572 Bacteria 78277
139 Ga0501037_0009362 3300049573 Bacteria 7190
140 Ga0501037_0025671 3300049573 Bacteria 4352
141 Ga0501037_0070179 3300049573 Bacteria 2550
142 Ga0501037_0309508 3300049573 Bacteria 1095
143 Ga0501038_0022309 3300049574 Bacteria 5675
144 Ga0501038_0034042 3300049574 Bacteria 4482
145 Ga0501038_0334745 3300049574 Bacteria 1182
146 Ga0501039_0300249 3300049575 Bacteria 1263
147 Ga0501043_0005247 3300049579 Bacteria 10471
148 Ga0501043_0083573 3300049579 Bacteria 2510
149 Ga0501046_0001765 3300049580 Bacteria 20669
150 Ga0501046_0087439 3300049580 Bacteria 2402
151 Ga0501047_0008921 3300049581 Bacteria 9467
152 Ga0501047_0066131 3300049581 Bacteria 3485
153 Ga0501047_0164267 3300049581 Bacteria 2091
154 Ga0501198_000012 3300049649 Bacteria 113529
155 Ga0501206_019938 3300049653 Bacteria 951
156 Ga0501222_000010 3300049662 Bacteria 113536
157 Ga0501035_0001267 3300049822 Bacteria 26211
158 Ga0501035_0002689 3300049822 Bacteria 17298
159 Ga0501035_0011535 3300049822 Bacteria 8189
160 Ga0501035_0023108 3300049822 Bacteria 5706
161 Ga0501044_0001108 3300049823 Bacteria 32043
162 Ga0501044_0001149 3300049823 Bacteria 31351
163 Ga0501044_0002780 3300049823 Bacteria 19930
164 Ga0501044_0089032 3300049823 Bacteria 3116
165 nmdc:mga00v17_6899_c1 3300050491 Bacteria 6037
166 nmdc:mga0k408_16522_c1 3300050493 Bacteria 3361
167 nmdc:mga07m45_7493_c1 3300050496 Bacteria 5578
168 nmdc:mga09592_11912_c1 3300050508 Bacteria 7074
169 nmdc:mga0qj67_20345_c1 3300050509 Bacteria 5078
170 nmdc:mga0a205_125685_c1 3300050515 Bacteria 2464
171 Ga0500568_0007818 3300053139 Bacteria 5208
172 Ga0500645_006573 3300053730 Bacteria 4129
173 2599904645 2599185292 Bacteria 6290804
174 2643861191 2643221569 Bacteria 6064337
175 2643983343 2643221594 Bacteria 5811388
176 2644124543 2643221621 Bacteria 6212786
177 2644338587 2643221660 Bacteria 4208257
178 2739610558 2739367655 Bacteria 4051151
179 2809032739 2808606395 Bacteria 6020352
180 2831869454 2831864461 Bacteria 6502356
181 2855735085 2855730933 Bacteria 7047938
182 2855770869 2855767633 Bacteria 7049357
183 2857540556 2857537821 Bacteria 5248181
184 2857581201 2857576091 Bacteria 5465855
185 2858951345 2858950400 Bacteria 6783797
186 2881418258 2881412998 Bacteria 6492157
187 2881931204 2881927736 Bacteria 3993927
188 2887375834 2887375801 Bacteria 5334027
189 2895515343 2895511927 Bacteria 6802080
190 2941485325
191 8048748628 8048746797 Bacteria 3557226
192 8055227515 8055225921 Bacteria 3341787
193 JGI25151J46595_10000137
194 Ga0007410J51695_1047553
195 Ga0007409J51694_1023236
196 Ga0007416J51690_1023564
197 Ga0032354_1043026
198 Ga0055529_1001284
199 Ga0055524_1000109
200 Ga0070676_10002353
201 Ga0070661_100010308
202 Ga0070673_100523556
203 Ga0070659_100319720
204 Ga0070667_100010447
205 Ga0070663_100000198
206 Ga0070663_100197277
207 Ga0068857_100284526
208 Ga0075368_10071575
209 Ga0075364_10011166
210 Ga0075366_10001740
211 Ga0075366_10016355
212 Ga0075370_10008610
213 Ga0075433_10109640
214 Ga0075429_100001780
215 Ga0079104_1000001
216 Ga0105245_10295192
217 Ga0105243_10407556
218 Ga0105248_10017366
219 Ga0157375_10538675
220 Ga0163161_10196208
221 Ga0213872_10000081
222 Ga0213872_10000104
223 Ga0213872_10001145
224 Ga0209258_105038
225 Ga0209565_1015226
226 Ga0209455_1000350
227 Ga0209673_1023729
228 Ga0209675_1008682
229 Ga0209676_1003523
230 Ga0209025_1000071
231 Ga0209564_1000008
232 Ga0209050_1003404
233 Ga0209050_1021867
234 Ga0209256_1000015
235 Ga0207657_10000350
236 Ga0207649_10009525
237 Ga0207690_10001117
238 Ga0207706_10261457
239 Ga0207709_10075092
240 Ga0207711_10013604
241 Ga0207679_10000678
242 Ga0207658_10009698
243 Ga0207639_10043419
244 Ga0207678_10200361
245 Ga0209281_1000057
246 Ga0209968_1000857
247 Ga0209966_1000138
248 Ga0268266_10132799
249 Ga0307515_10005665
250 Ga0265327_10072796
251 Ga0307513_10228296
252 Ga0307509_10044554
253 Ga0307509_10317385
254 Ga0307508_10231965
255 Ga0307516_10000419
256 Ga0307412_10000137
257 Ga0307412_10085091
258 Ga0307507_10053220
259 Ga0395899_0001209
260 Ga0395900_0000058
261 Ga0395900_0003080
262 Ga0395900_0003827
263 Ga0395898_0005866
264 Ga0395898_0184610
265 Ga0395905_0051424
266 Ga0395901_0005490
267 Ga0395901_0019567
268 Ga0436361_0107660
269 Ga0436361_0811061
270 Ga0439431_0000761
271 Ga0450896_009355
272 Ga0439434_0064653
273 Ga0466972_0061187
274 Ga0466965_0022511
275 Ga0466966_0061276
276 Ga0466963_0004173
277 Ga0466964_0004584
278 Ga0453684_0050548
279 Ga0466970_0023384
280 Ga0466970_0140985
281 Ga0466957_0023435
282 Ga0466957_0048752
283 Ga0466957_0067399
284 Ga0466960_0027445
285 Ga0466959_0000496
286 Ga0451576_0178246
287 Ga0451576_0189376
288 Ga0495607_0000077
289 Ga0495633_0004494
290 Ga0495658_0058314
291 Ga0495626_0100908
292 Ga0496100_0130698
293 Ga0496101_0101787
294 Ga0496104_0158096
295 Ga0496105_0241612
296 Ga0496108_0552811
297 Ga0496109_0178785
298 Ga0496110_0309101
299 Ga0496112_0004682
300 Ga0496113_0042761
301 Ga0496114_0013903
302 Ga0496114_0020908
303 Ga0496116_0018089
304 Ga0496116_0136946
305 Ga0496117_0011084
306 Ga0496117_0185625
307 Ga0496118_0011498
308 Ga0496118_0164506
309 Ga0496120_0001170
310 Ga0496121_0002222
311 Ga0496121_0019846
312 Ga0496122_0001897
313 Ga0496123_0048231
314 Ga0496123_0082028
315 Ga0496124_0178312
316 Ga0496125_0000096
317 Ga0496125_0005116
318 Ga0496125_0015623
319 Ga0496126_0458740
320 Ga0501031_0001760
321 Ga0501031_0128915
322 Ga0501031_0172053
323 Ga0501032_0001745
324 Ga0501033_0003409
325 Ga0501033_0024508
326 Ga0501033_0031411
327 Ga0501034_0007877
328 Ga0501034_0038646
329 Ga0501034_0243360
330 Ga0501036_0000045
331 Ga0501037_0009362
332 Ga0501037_0025671
333 Ga0501037_0070179
334 Ga0501037_0309508
335 Ga0501038_0022309
336 Ga0501038_0034042
337 Ga0501038_0334745
338 Ga0501039_0300249
339 Ga0501043_0005247
340 Ga0501043_0083573
341 Ga0501046_0001765
342 Ga0501046_0087439
343 Ga0501047_0008921
344 Ga0501047_0066131
345 Ga0501047_0164267
346 Ga0501198_000012
347 Ga0501206_019938
348 Ga0501222_000010
349 Ga0501035_0001267
350 Ga0501035_0002689
351 Ga0501035_0011535
352 Ga0501035_0023108
353 Ga0501044_0001108
354 Ga0501044_0001149
355 Ga0501044_0002780
356 Ga0501044_0089032
357 nmdc:mga00v17_6899_c1
358 nmdc:mga0k408_16522_c1
359 nmdc:mga07m45_7493_c1
360 nmdc:mga09592_11912_c1
361 nmdc:mga0qj67_20345_c1
362 nmdc:mga0a205_125685_c1
363 Ga0500568_0007818
364 Ga0500645_006573
365 2599904645
366 2643861191
367 2643983343
368 2644124543
369 2644338587
370 2739610558
371 2809032739
372 2831869454
373 2855735085
374 2855770869
375 2857540556
376 2857581201
377 2858951345
378 2881418258
379 2881931204
380 2887375834
381 2895515343
382 2941485325
383 8048748628
384 8055227515

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06325

PrmA

Ribosomal protein L11 methyltransferase (PrmA)

9

318

0.91

PF05175

MTS

Methyltransferase small domain

157

266

0.83

PF13489

Methyltransf_23

Methyltransferase domain

170

317

0.67

Structural Annotation

Top 5 Hits

ID Description Score Start End
1dus-assembly1.cif.gz_A mj0882-a hypothetical protein from m. jannaschii 0.8873 175 309
3grz-assembly1.cif.gz_A crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8844 111 309
3grz-assembly1.cif.gz_A crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8714 111 309
3grz-assembly1.cif.gz_B crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8683 111 309
3grz-assembly1.cif.gz_B crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8641 111 309
ID Description Score Start End Superfamily
af_P0A8T1_101_293_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9394 110 309 3.40.50.150
af_P0A8T1_101_293_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.93 110 309 3.40.50.150
2nxjB03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9286 160 308 3.40.50.150
3grzA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9147 159 309 3.40.50.150
af_Q2FXZ4_114_311_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9083 110 309 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A3D3SIM2-F1-model_v4 deleted 0.9913 192 309
AF-A0A3C0KJ32-F1-model_v4 50S ribosomal protein L11 methyltransferase 0.9672 216 304 GO:0005840
GO:0008168
GO:0032259
AF-A0A837WWS1-F1-model_v4 deleted 0.9585 243 309
AF-A0A520C8W6-F1-model_v4 50S ribosomal protein L11 methyltransferase 0.9571 148 308 GO:0005840
GO:0008276
GO:0032259
AF-A0A4Q3Q004-F1-model_v4 deleted 0.9552 162 308

Map