F284598

General Info

Members Datasets Scaffolds Average Seq Length
185 127 370 416

Family's Representative Sequence

Representative Sequence 3300031901|Ga0307406_10011954|Ga0307406_100119545
Length 452
Sequence VREPGRALSSCRPRYALLCTDERRATAPIAVRNSSNGPRRSSALVLLSRCTTAVDAFPIYLFIFIVFLNRYVFGFYLTVVRRNKIDETIAGYEPTVTVVVPLYNEGSSIYDTIKSLVALDYPADKLSVTVVDDCSTDDSYEHACRAAREHGNVRVLRNPHNMGKRKGINHAVREATAEIIVSVDSDVIIYPTALRELVARFVSPDIAAVGGRVHVSNPNENWLTRLQTIKYYFGQEHLKNLERGLRSVMCLSGCLTAYRRSVLMELEPILENRNILGVAIKYGEDRFLTHQIVKHGYRTVMTMKAMCFTKAATTMKAYFNQQLRWKRSNIVDFIVGIGHAWTLHPLLCLQYLSMLLLLLVYPFVIVMNIQSGDFLQLTMFHVFIIGGFSMVYYFAPSVRALPPWLRVHPIAFLPMAVLMPVAYLLLTPLGLFTLDSSSWETRGHGGSPALAS

Samples

Sample ID Description Type Environment
1 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
2 3300004798 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
3 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
9 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
12 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
16 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
19 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
23 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
24 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
25 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
26 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
27 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
34 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
35 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
36 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
37 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
38 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
39 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
59 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
62 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
65 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
66 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
67 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
68 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
69 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
70 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
71 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
72 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
80 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
81 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
82 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
83 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
84 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
85 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
86 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
87 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
88 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
89 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
90 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
94 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
95 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
96 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
97 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
98 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
99 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
100 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
101 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
102 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
103 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
104 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
105 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
106 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
107 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
108 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
109 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
112 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
113 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
114 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
115 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
116 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
117 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
118 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
119 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
120 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
121 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
122 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
123 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
124 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
125 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
126 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
127 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.46
Metatranscriptomes 0.54
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.27
Nodule 0
Rhizoplane 0.54
Rhizosphere 82.7
Stem 0
Stem Tuber 0
Unclassified 11.89

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307406_10011954 3300031901 Bacteria 4936
2 Ga0058859_10136476 3300004798 Bacteria 2317
3 Ga0070658_10030600 3300005327 Bacteria 4324
4 Ga0070690_100007775 3300005330 Bacteria 6144
5 Ga0068869_100020135 3300005334 Bacteria 4570
6 Ga0070680_100136956 3300005336 Bacteria 2051
7 Ga0070680_100149613 3300005336 Bacteria 1960
8 Ga0070689_100057527 3300005340 Bacteria 3018
9 Ga0070688_100069603 3300005365 Bacteria 2247
10 Ga0070701_10027708 3300005438 Unclassified 2779
11 Ga0070678_100020752 3300005456 Bacteria 4316
12 Ga0070678_100129562 3300005456 Bacteria 2002
13 Ga0070681_10032118 3300005458 Bacteria 5269
14 Ga0070681_10082950 3300005458 Bacteria 3160
15 Ga0070706_100014194 3300005467 Bacteria 7359
16 Ga0070706_100025909 3300005467 Bacteria 5397
17 Ga0070706_100036376 3300005467 Bacteria 4547
18 Ga0070698_100000896 3300005471 Bacteria 32688
19 Ga0070698_100002184 3300005471 Bacteria 21711
20 Ga0070698_100036339 3300005471 Bacteria 5089
21 Ga0070679_100011971 3300005530 Bacteria 8281
22 Ga0070679_100012486 3300005530 Bacteria 8122
23 Ga0070679_100115415 3300005530 Bacteria 2671
24 Ga0070684_100039445 3300005535 Bacteria 4062
25 Ga0070684_100080781 3300005535 Bacteria 2877
26 Ga0070697_100125478 3300005536 Bacteria 2150
27 Ga0070665_100006894 3300005548 Bacteria 11548
28 Ga0070665_100013942 3300005548 Bacteria 8084
29 Ga0068856_100232356 3300005614 Bacteria 1859
30 Ga0068864_100081616 3300005618 Bacteria 2835
31 Ga0068861_100034600 3300005719 Bacteria 3737
32 Ga0068863_100006143 3300005841 Bacteria 11779
33 Ga0068863_100143168 3300005841 Bacteria 2286
34 Ga0068860_100124101 3300005843 Bacteria 2475
35 Ga0070717_10017190 3300006028 Bacteria 5622
36 Ga0070717_10027252 3300006028 Bacteria 4566
37 Ga0068871_100067363 3300006358 Bacteria 2937
38 Ga0075430_100146369 3300006846 Bacteria 1967
39 Ga0075431_100195323 3300006847 Bacteria 2072
40 Ga0075429_100021113 3300006880 Bacteria 5646
41 Ga0075429_100050577 3300006880 Bacteria 3615
42 Ga0068865_100116364 3300006881 Bacteria 1980
43 Ga0111539_10000947 3300009094 Bacteria 38042
44 Ga0111539_10023815 3300009094 Bacteria 7524
45 Ga0105245_10000011 3300009098 Bacteria 271829
46 Ga0105245_10000059 3300009098 Bacteria 121609
47 Ga0105243_10030439 3300009148 Bacteria 4155
48 Ga0105242_10023666 3300009176 Bacteria 4842
49 Ga0105237_10069754 3300009545 Bacteria 3510
50 Ga0105249_10038379 3300009553 Bacteria 4346
51 Ga0105239_10190704 3300010375 Bacteria 2294
52 Ga0157374_10024454 3300013296 Bacteria 5417
53 Ga0157374_10025466 3300013296 Bacteria 5312
54 Ga0157379_10088750 3300014968 Unclassified 2773
55 Ga0157376_10061384 3300014969 Bacteria 3160
56 Ga0157376_10153982 3300014969 Unclassified 2076
57 Ga0207643_10017738 3300025908 Bacteria 3896
58 Ga0207705_10082968 3300025909 Bacteria 2338
59 Ga0207684_10013586 3300025910 Bacteria 7038
60 Ga0207684_10032981 3300025910 Bacteria 4405
61 Ga0207684_10071178 3300025910 Bacteria 2955
62 Ga0207707_10096564 3300025912 Bacteria 2583
63 Ga0207660_10057831 3300025917 Bacteria 2778
64 Ga0207660_10158478 3300025917 Bacteria 1744
65 Ga0207652_10019302 3300025921 Bacteria 5605
66 Ga0207652_10065159 3300025921 Bacteria 3154
67 Ga0207652_10157405 3300025921 Bacteria 2035
68 Ga0207694_10175607 3300025924 Bacteria 1736
69 Ga0207687_10000064 3300025927 Bacteria 82774
70 Ga0207687_10001499 3300025927 Bacteria 15990
71 Ga0207709_10170922 3300025935 Bacteria 1525
72 Ga0207670_10016522 3300025936 Unclassified 4438
73 Ga0207670_10021880 3300025936 Unclassified 3952
74 Ga0207704_10082696 3300025938 Bacteria 2081
75 Ga0207689_10019729 3300025942 Bacteria 5680
76 Ga0207661_10010946 3300025944 Bacteria 6550
77 Ga0207667_10004225 3300025949 Bacteria 17631
78 Ga0207712_10056450 3300025961 Bacteria 2766
79 Ga0207702_10167095 3300026078 Bacteria 2014
80 Ga0207641_10005162 3300026088 Bacteria 11166
81 Ga0207641_10043096 3300026088 Bacteria 3788
82 Ga0207683_10011565 3300026121 Bacteria 7534
83 Ga0207683_10053439 3300026121 Bacteria 3542
84 Ga0207683_10101513 3300026121 Bacteria 2569
85 Ga0207698_10353074 3300026142 Bacteria 1390
86 Ga0207428_10006736 3300027907 Bacteria 10545
87 Ga0268266_10001420 3300028379 Bacteria 28612
88 Ga0268266_10005161 3300028379 Bacteria 12303
89 Ga0268264_10179089 3300028381 Bacteria 1924
90 Ga0268264_10221521 3300028381 Bacteria 1742
91 Ga0268264_10297491 3300028381 Unclassified 1518
92 Ga0307517_10109466 3300028786 Bacteria 2113
93 Ga0307515_10014058 3300028794 Bacteria 14891
94 Ga0265338_10066042 3300028800 Bacteria 3133
95 Ga0265338_10082229 3300028800 Bacteria 2697
96 Ga0307513_10005355 3300031456 Bacteria 16962
97 Ga0307509_10000398 3300031507 Bacteria 72894
98 Ga0307509_10112311 3300031507 Bacteria 2725
99 Ga0307509_10139256 3300031507 Unclassified 2366
100 Ga0307508_10005191 3300031616 Bacteria 12463
101 Ga0265342_10004215 3300031712 Bacteria 11415
102 Ga0307516_10034424 3300031730 Bacteria 5090
103 Ga0373949_0007334 3300035090 Bacteria 2413
104 Ga0373936_0000024 3300035113 Bacteria 127202
105 Ga0373943_0101673 3300035170 Unclassified 1504
106 Ga0373961_0000183 3300035241 Bacteria 30129
107 Ga0395899_0011201 3300037312 Bacteria 6870
108 Ga0395899_0013022 3300037312 Bacteria 6362
109 Ga0395900_0006309 3300037418 Bacteria 12366
110 Ga0395900_0058426 3300037418 Bacteria 3970
111 Ga0395898_0053808 3300037466 Bacteria 3930
112 Ga0395905_0039303 3300037471 Bacteria 4439
113 Ga0395905_0042776 3300037471 Unclassified 4250
114 Ga0395905_0314837 3300037471 Unclassified 1454
115 Ga0395901_0035039 3300038443 Bacteria 5186
116 Ga0436365_1295634 3300039437 Bacteria 4183
117 Ga0436365_1323521 3300039437 Bacteria 2388
118 Ga0451853_3092496 3300041512 Bacteria 1701
119 Ga0451577_0006068 3300042876 Bacteria 12154
120 Ga0453684_0008636 3300044712 Bacteria 18146
121 Ga0453684_0181696 3300044712 Unclassified 2469
122 Ga0451576_0140812 3300045051 Unclassified 2515
123 Ga0466967_0117101 3300045976 Unclassified 2456
124 Ga0495592_0135406 3300046454 Bacteria 1719
125 Ga0495651_0021549 3300046462 Bacteria 5009
126 Ga0495602_0106304 3300048088 Bacteria 2291
127 Ga0496112_0013751 3300048915 Bacteria 7484
128 Ga0501292_001854 3300049515 Bacteria 2650
129 Ga0501298_007847 3300049521 Bacteria 1781
130 Ga0501299_001464 3300049522 Bacteria 3050
131 Ga0501299_001981 3300049522 Bacteria 2772
132 Ga0501034_0078322 3300049571 Unclassified 3310
133 Ga0501034_0100413 3300049571 Bacteria 2888
134 Ga0501047_0009850 3300049581 Bacteria 9030
135 Ga0501047_0029877 3300049581 Bacteria 5253
136 Ga0501047_0046756 3300049581 Bacteria 4182
137 Ga0501047_0050102 3300049581 Bacteria 4032
138 Ga0501047_0075724 3300049581 Unclassified 3238
139 Ga0501047_0089056 3300049581 Bacteria 2963
140 Ga0501070_0026026 3300049586 Bacteria 4908
141 Ga0501070_0037736 3300049586 Bacteria 4033
142 Ga0501070_0040087 3300049586 Bacteria 3906
143 Ga0501071_0057361 3300049587 Bacteria 2814
144 Ga0501072_0047649 3300049588 Unclassified 3375
145 Ga0501074_0051053 3300049590 Bacteria 2985
146 Ga0501077_0126107 3300049593 Bacteria 1623
147 Ga0501216_003376 3300049660 Unclassified 2321
148 Ga0501217_004974 3300049661 Bacteria 2757
149 Ga0501227_000255 3300049665 Bacteria 10889
150 Ga0501227_000682 3300049665 Bacteria 7458
151 Ga0501227_000932 3300049665 Bacteria 6413
152 Ga0501227_004833 3300049665 Bacteria 2890
153 Ga0501230_007439 3300049667 Unclassified 1623
154 Ga0501233_001064 3300049668 Bacteria 4655
155 Ga0501233_005838 3300049668 Bacteria 2293
156 Ga0501236_002966 3300049670 Bacteria 1969
157 Ga0501225_0001035 3300049705 Bacteria 8727
158 Ga0501229_003874 3300049706 Unclassified 1809
159 Ga0501081_0045384 3300049743 Unclassified 3018
160 Ga0501083_0094670 3300049744 Unclassified 1971
161 Ga0501044_0014814 3300049823 Bacteria 8405
162 nmdc:mga09592_107656_c1 3300050508 Bacteria 2391
163 nmdc:mga09592_108580_c1 3300050508 Bacteria 2380
164 nmdc:mga09592_5980_c1 3300050508 Bacteria 9920
165 nmdc:mga08y16_1067_c1 3300050511 Bacteria 26985
166 Ga0500635_0036449 3300053080 Bacteria 1621
167 Ga0500644_0005407 3300053088 Bacteria 3225
168 Ga0500583_0056128 3300053092 Bacteria 1844
169 Ga0500566_0021791 3300053094 Bacteria 3766
170 Ga0500566_0034258 3300053094 Bacteria 2954
171 Ga0500640_000749 3300053095 Bacteria 8751
172 Ga0500554_000095 3300053102 Bacteria 16470
173 Ga0500572_005441 3300053111 Bacteria 2885
174 Ga0500595_000135 3300053119 Bacteria 48110
175 Ga0500597_007088 3300053120 Bacteria 3774
176 Ga0500607_068543 3300053121 Bacteria 1836
177 Ga0500614_000496 3300053123 Bacteria 10281
178 Ga0500614_001560 3300053123 Bacteria 5422
179 Ga0500642_0023205 3300053130 Unclassified 2487
180 Ga0500559_0008392 3300053136 Bacteria 4530
181 Ga0500559_0049599 3300053136 Bacteria 1850
182 Ga0500568_0015366 3300053139 Bacteria 3429
183 Ga0500585_052382 3300053144 Bacteria 1459
184 Ga0500622_0027491 3300053156 Bacteria 2999
185 Ga0501082_0070758 3300060353 Bacteria 3004
186 Ga0307406_10011954
187 Ga0058859_10136476
188 Ga0070658_10030600
189 Ga0070690_100007775
190 Ga0068869_100020135
191 Ga0070680_100136956
192 Ga0070680_100149613
193 Ga0070689_100057527
194 Ga0070688_100069603
195 Ga0070701_10027708
196 Ga0070678_100020752
197 Ga0070678_100129562
198 Ga0070681_10032118
199 Ga0070681_10082950
200 Ga0070706_100014194
201 Ga0070706_100025909
202 Ga0070706_100036376
203 Ga0070698_100000896
204 Ga0070698_100002184
205 Ga0070698_100036339
206 Ga0070679_100011971
207 Ga0070679_100012486
208 Ga0070679_100115415
209 Ga0070684_100039445
210 Ga0070684_100080781
211 Ga0070697_100125478
212 Ga0070665_100006894
213 Ga0070665_100013942
214 Ga0068856_100232356
215 Ga0068864_100081616
216 Ga0068861_100034600
217 Ga0068863_100006143
218 Ga0068863_100143168
219 Ga0068860_100124101
220 Ga0070717_10017190
221 Ga0070717_10027252
222 Ga0068871_100067363
223 Ga0075430_100146369
224 Ga0075431_100195323
225 Ga0075429_100021113
226 Ga0075429_100050577
227 Ga0068865_100116364
228 Ga0111539_10000947
229 Ga0111539_10023815
230 Ga0105245_10000011
231 Ga0105245_10000059
232 Ga0105243_10030439
233 Ga0105242_10023666
234 Ga0105237_10069754
235 Ga0105249_10038379
236 Ga0105239_10190704
237 Ga0157374_10024454
238 Ga0157374_10025466
239 Ga0157379_10088750
240 Ga0157376_10061384
241 Ga0157376_10153982
242 Ga0207643_10017738
243 Ga0207705_10082968
244 Ga0207684_10013586
245 Ga0207684_10032981
246 Ga0207684_10071178
247 Ga0207707_10096564
248 Ga0207660_10057831
249 Ga0207660_10158478
250 Ga0207652_10019302
251 Ga0207652_10065159
252 Ga0207652_10157405
253 Ga0207694_10175607
254 Ga0207687_10000064
255 Ga0207687_10001499
256 Ga0207709_10170922
257 Ga0207670_10016522
258 Ga0207670_10021880
259 Ga0207704_10082696
260 Ga0207689_10019729
261 Ga0207661_10010946
262 Ga0207667_10004225
263 Ga0207712_10056450
264 Ga0207702_10167095
265 Ga0207641_10005162
266 Ga0207641_10043096
267 Ga0207683_10011565
268 Ga0207683_10053439
269 Ga0207683_10101513
270 Ga0207698_10353074
271 Ga0207428_10006736
272 Ga0268266_10001420
273 Ga0268266_10005161
274 Ga0268264_10179089
275 Ga0268264_10221521
276 Ga0268264_10297491
277 Ga0307517_10109466
278 Ga0307515_10014058
279 Ga0265338_10066042
280 Ga0265338_10082229
281 Ga0307513_10005355
282 Ga0307509_10000398
283 Ga0307509_10112311
284 Ga0307509_10139256
285 Ga0307508_10005191
286 Ga0265342_10004215
287 Ga0307516_10034424
288 Ga0373949_0007334
289 Ga0373936_0000024
290 Ga0373943_0101673
291 Ga0373961_0000183
292 Ga0395899_0011201
293 Ga0395899_0013022
294 Ga0395900_0006309
295 Ga0395900_0058426
296 Ga0395898_0053808
297 Ga0395905_0039303
298 Ga0395905_0042776
299 Ga0395905_0314837
300 Ga0395901_0035039
301 Ga0436365_1295634
302 Ga0436365_1323521
303 Ga0451853_3092496
304 Ga0451577_0006068
305 Ga0453684_0008636
306 Ga0453684_0181696
307 Ga0451576_0140812
308 Ga0466967_0117101
309 Ga0495592_0135406
310 Ga0495651_0021549
311 Ga0495602_0106304
312 Ga0496112_0013751
313 Ga0501292_001854
314 Ga0501298_007847
315 Ga0501299_001464
316 Ga0501299_001981
317 Ga0501034_0078322
318 Ga0501034_0100413
319 Ga0501047_0009850
320 Ga0501047_0029877
321 Ga0501047_0046756
322 Ga0501047_0050102
323 Ga0501047_0075724
324 Ga0501047_0089056
325 Ga0501070_0026026
326 Ga0501070_0037736
327 Ga0501070_0040087
328 Ga0501071_0057361
329 Ga0501072_0047649
330 Ga0501074_0051053
331 Ga0501077_0126107
332 Ga0501216_003376
333 Ga0501217_004974
334 Ga0501227_000255
335 Ga0501227_000682
336 Ga0501227_000932
337 Ga0501227_004833
338 Ga0501230_007439
339 Ga0501233_001064
340 Ga0501233_005838
341 Ga0501236_002966
342 Ga0501225_0001035
343 Ga0501229_003874
344 Ga0501081_0045384
345 Ga0501083_0094670
346 Ga0501044_0014814
347 nmdc:mga09592_107656_c1
348 nmdc:mga09592_108580_c1
349 nmdc:mga09592_5980_c1
350 nmdc:mga08y16_1067_c1
351 Ga0500635_0036449
352 Ga0500644_0005407
353 Ga0500583_0056128
354 Ga0500566_0021791
355 Ga0500566_0034258
356 Ga0500640_000749
357 Ga0500554_000095
358 Ga0500572_005441
359 Ga0500595_000135
360 Ga0500597_007088
361 Ga0500607_068543
362 Ga0500614_000496
363 Ga0500614_001560
364 Ga0500642_0023205
365 Ga0500559_0008392
366 Ga0500559_0049599
367 Ga0500568_0015366
368 Ga0500585_052382
369 Ga0500622_0027491
370 Ga0501082_0070758

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00535

Glycos_transf_2

Glycosyl transferase family 2

97

267

0.9

PF03142

Chitin_synth_2

Chitin synthase

160

385

0.87

PF13641

Glyco_tranf_2_3

Glycosyltransferase like family 2

94

328

0.86

PF13632

Glyco_trans_2_3

Glycosyl transferase family group 2

179

433

0.84

PF13506

Glyco_transf_21

Glycosyl transferase family 21

148

327

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
7ck1-assembly1.cif.gz_A crystal structure of arabidopsis cesa3 catalytic domain 0.8012 43 101
7ck2-assembly1.cif.gz_A crystal structure of arabidopsis cesa3 catalytic domain with udp-glucose 0.7957 43 101
7ck2-assembly2.cif.gz_B crystal structure of arabidopsis cesa3 catalytic domain with udp-glucose 0.794 43 101
7ck3-assembly2.cif.gz_B crystal structure of arabidopsis cesa3 catalytic domain 0.7823 43 101
7spa-assembly1.cif.gz_A chlorella virus hyaluronan synthase in the glcnac-primed, channel-open state 0.7733 18 375
ID Description Score Start End Superfamily
af_Q61647_178_371_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8808 115 255 3.90.550.10
af_X1WCR3_86_406_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8722 46 299 3.90.550.10
af_A9C3Q0_26_206_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8506 44 111 3.90.550.10
af_A0A1D6HKA0_92_329_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8166 40 255 3.90.550.10
af_Q5AMQ4_66_210_3.90.550.10 Alpha Beta;Alpha-Beta Complex;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A;Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.8115 47 132 3.90.550.10
ID Description Score Start End GO Terms
AF-A0A221IV03-F1-model_v4 N-acetylglucosaminyltransferase (Nodulation protein C) 0.9508 144 271 GO:0005886
GO:0030213
GO:0045226
GO:0050501
GO:0085029
AF-Q90489-F1-model_v4 deleted 0.9488 146 261
AF-A0A0G1JSH4-F1-model_v4 Glycosyl transferase 0.944 121 288 GO:0005886
GO:0030213
GO:0045226
GO:0050501
GO:0085029
AF-A0A0H4LRS1-F1-model_v4 N-acetylglucosaminyltransferase 0.9424 123 275 GO:0005886
GO:0030213
GO:0045226
GO:0050501
GO:0085029
AF-A0A7W0Y1G1-F1-model_v4 Glycosyltransferase 0.9423 1 393 GO:0005886
GO:0030213
GO:0045226
GO:0050501
GO:0085029

Map