F281347
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 183 | 149 | 182 | 651 |
Family's Representative Sequence
| Representative Sequence | 3300046506|Ga0495583_0000018|Ga0495583_0000018_165527_167572 |
| Length | 681 |
| Sequence | MIPELGQVALLLALAVALILGTLPLVGAARGRSDWMALARPAARAHGLLVGVAFACLVSSFVRNDFSVQYVANNSNSLLPLFYRVAGVWGGHEGSLLLWLAMLGGWMLAVAQFSHKLPAPFVARVLGVMGLVAVGFLLFMLTTSNPFDRLVPVPMDGNDLNPLLQDPGMVSHPPMLYMGYVGFSVAFAFAVAALIEGKLDATWARWTRPWTTAAWSCLTIGIMLGSAWAYYELGWGGWWFWDPVENASFMPWLAGTALIHSLAVTEKRGAFKSWTVLLAVLAFSLSLLGTFIVRSGVLSSVHAFATDPARGRFILGFLVFVIGGALSLYAWRAPKVGLGARFSLVSRESMLLGNNMLFVVVCASVLLGTMYPLLLDAMGMGKISVGAPYFEAVFLPLMVPVVVLLGIGPLARWKEASLPSLLHRLRWAALAAVLGMLATGWLYGHISAVASLGLLMAYWIVASIVVDIVERLRSPGGAQLDVVARIRQWPRSLVGMWLAHLGVAAFALGVSMVRTYEVEEDLTMTLGASATVGGYEFRFADLHELHGPNYEAIEADMPVTRNGSEVAVLHPQKRVYRVQRTPTTEAAIQPGVTRDLYVSLGEAVQPNTWTLRVHVKPFVDWIWGGCLLMALGGLVAVSDRRYRLKQRQAIVEDAAIAAPPTAFAPPPVPQAMAAPNLGRSE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221660 | Methylibium sp. Root1272 | Isolate | Unclassified |
| 2 | 3300002705 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS | Metagenome | Unclassified |
| 3 | 3300002738 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA | Metagenome | Unclassified |
| 4 | 3300002741 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL | Metagenome | Unclassified |
| 5 | 3300002773 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS | Metagenome | Endosphere |
| 6 | 3300002774 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA | Metagenome | Endosphere |
| 7 | 3300003215 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF | Metagenome | Endosphere |
| 8 | 3300003752 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 | Metagenome | Endosphere |
| 9 | 3300003756 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 | Metagenome | Endosphere |
| 10 | 3300003759 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 | Metagenome | Endosphere |
| 11 | 3300003761 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 | Metagenome | Endosphere |
| 12 | 3300003763 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 | Metagenome | Endosphere |
| 13 | 3300003771 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 | Metagenome | Endosphere |
| 14 | 3300003773 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 | Metagenome | Endosphere |
| 15 | 3300003775 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 | Metagenome | Endosphere |
| 16 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 17 | 3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005339 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 25 | 3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Metagenome | Rhizosphere |
| 26 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 27 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 28 | 3300005539 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 | Metagenome | Rhizosphere |
| 29 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 31 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 33 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 34 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 35 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 36 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 37 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 38 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 39 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Metagenome | Rhizosphere |
| 41 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 42 | 3300013100 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Metagenome | Rhizosphere |
| 44 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 45 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 46 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 47 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 48 | 3300021388 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 | Metagenome | Unclassified |
| 49 | 3300025226 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 50 | 3300025230 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 51 | 3300025231 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 52 | 3300025242 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 53 | 3300025245 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) | Metagenome | Endosphere |
| 54 | 3300025246 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) | Metagenome | Unclassified |
| 55 | 3300025250 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) | Metagenome | Unclassified |
| 56 | 3300025253 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025256 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) | Metagenome | Unclassified |
| 58 | 3300025258 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) | Metagenome | Endosphere |
| 59 | 3300025263 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 60 | 3300025272 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 61 | 3300025295 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 62 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 63 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 64 | 3300025299 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) | Metagenome | Endosphere |
| 65 | 3300025303 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 66 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025915 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025920 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 84 | 3300026078 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 85 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 86 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 87 | 3300027876 | Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 88 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 89 | 3300028666 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG | Metagenome | Rhizosphere |
| 90 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 91 | 3300028794 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM | Metagenome | Unclassified |
| 92 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 93 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 94 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 95 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 96 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 97 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 98 | 3300031665 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 | Metagenome | Rhizosphere |
| 99 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 100 | 3300031728 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC | Metagenome | Rhizosphere |
| 101 | 3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Metagenome | Unclassified |
| 102 | 3300032133 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA | Metagenome | Rhizosphere |
| 103 | 3300033180 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM | Metagenome | Unclassified |
| 104 | 3300035086 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 | Metagenome | Rhizosphere |
| 105 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 106 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 107 | 3300036647 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA | Metagenome | Rhizosphere |
| 108 | 3300036712 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA | Metagenome | Rhizosphere |
| 109 | 3300037466 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 | Metagenome | Rhizosphere |
| 110 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 111 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 112 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 113 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 114 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 115 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 116 | 3300044706 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R | Metagenome | Rhizosphere |
| 117 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 118 | 3300044719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R | Metagenome | Rhizosphere |
| 119 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 120 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 121 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 122 | 3300046506 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere | Metagenome | Rhizosphere |
| 123 | 3300046507 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere | Metagenome | Rhizosphere |
| 124 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 125 | 3300046543 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere | Metagenome | Rhizosphere |
| 126 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300046690 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 130 | 3300046794 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere | Metagenome | Rhizosphere |
| 131 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 132 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 133 | 3300047472 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere | Metagenome | Rhizosphere |
| 134 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 135 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 136 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 137 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 138 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 139 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 140 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 141 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 142 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 143 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 144 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 145 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 146 | 3300053080 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere | Metagenome | Endosphere |
| 147 | 3300053136 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere | Metagenome | Endosphere |
| 148 | 3300053154 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere | Metagenome | Endosphere |
| 149 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 99.45 |
| Metatranscriptomes | 0 |
| Isolates | 0.55 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 19.67 |
| Nodule | 0 |
| Rhizoplane | 1.64 |
| Rhizosphere | 67.21 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 11.48 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25156J39149_1000596 | 3300002705 | Bacteria | 20043 |
| 2 | JGI25154J39366_1001305 | 3300002738 | Bacteria | 9256 |
| 3 | JGI25157J39369_1000045 | 3300002741 | Bacteria | 122406 |
| 4 | JGI25152J39213_1000121 | 3300002773 | Bacteria | 54400 |
| 5 | JGI25150J39212_1000112 | 3300002774 | Bacteria | 45963 |
| 6 | JGI25153J46596_10009606 | 3300003215 | Bacteria | 4466 |
| 7 | Ga0055539_1000261 | 3300003752 | Bacteria | 33348 |
| 8 | Ga0055533_1000026 | 3300003756 | Bacteria | 323407 |
| 9 | Ga0055525_1001497 | 3300003759 | Bacteria | 4030 |
| 10 | Ga0055535_1000056 | 3300003761 | Bacteria | 128204 |
| 11 | Ga0055529_1000840 | 3300003763 | Bacteria | 18043 |
| 12 | Ga0055526_1001604 | 3300003771 | Bacteria | 15880 |
| 13 | Ga0055537_1003024 | 3300003773 | Bacteria | 5310 |
| 14 | Ga0055524_1001177 | 3300003775 | Bacteria | 15608 |
| 15 | Ga0055524_1001482 | 3300003775 | Bacteria | 13406 |
| 16 | Ga0055530_10000186 | 3300003791 | Bacteria | 55634 |
| 17 | Ga0070658_10030417 | 3300005327 | Bacteria | 4337 |
| 18 | Ga0070683_100042940 | 3300005329 | Bacteria | 4165 |
| 19 | Ga0070660_100000932 | 3300005339 | Bacteria | 19511 |
| 20 | Ga0070661_100014641 | 3300005344 | Bacteria | 5529 |
| 21 | Ga0070671_100021917 | 3300005355 | Bacteria | 5219 |
| 22 | Ga0070667_100000219 | 3300005367 | Bacteria | 66264 |
| 23 | Ga0070708_100066318 | 3300005445 | Bacteria | 3240 |
| 24 | Ga0070663_100001163 | 3300005455 | Bacteria | 14509 |
| 25 | Ga0070662_100001459 | 3300005457 | Bacteria | 14573 |
| 26 | Ga0070662_100004307 | 3300005457 | Bacteria | 8989 |
| 27 | Ga0068867_100078317 | 3300005459 | Bacteria | 2486 |
| 28 | Ga0070684_100022898 | 3300005535 | Bacteria | 5217 |
| 29 | Ga0068853_100021638 | 3300005539 | Bacteria | 5364 |
| 30 | Ga0070665_100012159 | 3300005548 | Bacteria | 8678 |
| 31 | Ga0068855_100004813 | 3300005563 | Bacteria | 16483 |
| 32 | Ga0068855_100086376 | 3300005563 | Bacteria | 3627 |
| 33 | Ga0070664_100003781 | 3300005564 | Bacteria | 12209 |
| 34 | Ga0068854_100029194 | 3300005578 | Bacteria | 3816 |
| 35 | Ga0068856_100000289 | 3300005614 | Bacteria | 55087 |
| 36 | Ga0068856_100017101 | 3300005614 | Bacteria | 7030 |
| 37 | Ga0068852_100065344 | 3300005616 | Bacteria | 3174 |
| 38 | Ga0068861_100000289 | 3300005719 | Bacteria | 28236 |
| 39 | Ga0070717_10049635 | 3300006028 | Bacteria | 3445 |
| 40 | Ga0075429_100006162 | 3300006880 | Bacteria | 10369 |
| 41 | Ga0105245_10011447 | 3300009098 | Bacteria | 7726 |
| 42 | Ga0114129_10181635 | 3300009147 | Bacteria | 2862 |
| 43 | Ga0105243_10104485 | 3300009148 | Bacteria | 2358 |
| 44 | Ga0105239_10016776 | 3300010375 | Bacteria | 8095 |
| 45 | Ga0105239_10062751 | 3300010375 | Bacteria | 4078 |
| 46 | Ga0157373_10001146 | 3300013100 | Bacteria | 20311 |
| 47 | Ga0157371_10001270 | 3300013102 | Bacteria | 26598 |
| 48 | Ga0157370_10020147 | 3300013104 | Bacteria | 6666 |
| 49 | Ga0157370_10031257 | 3300013104 | Bacteria | 5210 |
| 50 | Ga0157369_10034865 | 3300013105 | Bacteria | 5520 |
| 51 | Ga0157378_10030875 | 3300013297 | Bacteria | 4731 |
| 52 | Ga0157372_10002798 | 3300013307 | Bacteria | 18848 |
| 53 | Ga0157372_10082345 | 3300013307 | Bacteria | 3643 |
| 54 | Ga0213875_10000254 | 3300021388 | Bacteria | 53556 |
| 55 | Ga0209674_100024 | 3300025226 | Bacteria | 535481 |
| 56 | Ga0209563_100069 | 3300025230 | Bacteria | 253154 |
| 57 | Ga0207427_100214 | 3300025231 | Bacteria | 51319 |
| 58 | Ga0209258_100071 | 3300025242 | Bacteria | 278319 |
| 59 | Ga0207425_1000021 | 3300025245 | Bacteria | 367537 |
| 60 | Ga0209646_1000012 | 3300025246 | Bacteria | 573300 |
| 61 | Ga0209026_1000004 | 3300025250 | Bacteria | 949012 |
| 62 | Ga0209677_100092 | 3300025253 | Bacteria | 102482 |
| 63 | Ga0209677_100595 | 3300025253 | Bacteria | 19611 |
| 64 | Ga0209677_102059 | 3300025253 | Bacteria | 7945 |
| 65 | Ga0209759_1000003 | 3300025256 | Bacteria | 792130 |
| 66 | Ga0209759_1000756 | 3300025256 | Bacteria | 27855 |
| 67 | Ga0209759_1001151 | 3300025256 | Bacteria | 16810 |
| 68 | Ga0209759_1010553 | 3300025256 | Bacteria | 2700 |
| 69 | Ga0209129_1000020 | 3300025258 | Bacteria | 457053 |
| 70 | Ga0209565_1002481 | 3300025263 | Bacteria | 6601 |
| 71 | Ga0209455_1000030 | 3300025272 | Bacteria | 533479 |
| 72 | Ga0209564_1000063 | 3300025295 | Bacteria | 318515 |
| 73 | Ga0209564_1004009 | 3300025295 | Bacteria | 9329 |
| 74 | Ga0209758_1000077 | 3300025297 | Bacteria | 268195 |
| 75 | Ga0209050_1000302 | 3300025298 | Bacteria | 103095 |
| 76 | Ga0209256_1000079 | 3300025299 | Bacteria | 225382 |
| 77 | Ga0209256_1000598 | 3300025299 | Bacteria | 50177 |
| 78 | Ga0209051_1002911 | 3300025303 | Bacteria | 11739 |
| 79 | Ga0207705_10048034 | 3300025909 | Bacteria | 3070 |
| 80 | Ga0207695_10065200 | 3300025913 | Bacteria | 3745 |
| 81 | Ga0207671_10016519 | 3300025914 | Bacteria | 5732 |
| 82 | Ga0207693_10020414 | 3300025915 | Bacteria | 5270 |
| 83 | Ga0207657_10010916 | 3300025919 | Bacteria | 9040 |
| 84 | Ga0207649_10025326 | 3300025920 | Bacteria | 3457 |
| 85 | Ga0207681_10054516 | 3300025923 | Bacteria | 2719 |
| 86 | Ga0207687_10019700 | 3300025927 | Unclassified | 4472 |
| 87 | Ga0207700_10009964 | 3300025928 | Bacteria | 5969 |
| 88 | Ga0207644_10011896 | 3300025931 | Bacteria | 5768 |
| 89 | Ga0207644_10067420 | 3300025931 | Bacteria | 2608 |
| 90 | Ga0207706_10002095 | 3300025933 | Bacteria | 19518 |
| 91 | Ga0207706_10044681 | 3300025933 | Bacteria | 3926 |
| 92 | Ga0207691_10031686 | 3300025940 | Bacteria | 4933 |
| 93 | Ga0207679_10015032 | 3300025945 | Bacteria | 5103 |
| 94 | Ga0207679_10023735 | 3300025945 | Bacteria | 4197 |
| 95 | Ga0207667_10007488 | 3300025949 | Bacteria | 13107 |
| 96 | Ga0207667_10017769 | 3300025949 | Bacteria | 7999 |
| 97 | Ga0207667_10018940 | 3300025949 | Bacteria | 7698 |
| 98 | Ga0207667_10026293 | 3300025949 | Bacteria | 6361 |
| 99 | Ga0207667_10059322 | 3300025949 | Bacteria | 4008 |
| 100 | Ga0207640_10011774 | 3300025981 | Bacteria | 4962 |
| 101 | Ga0207639_10093217 | 3300026041 | Bacteria | 2415 |
| 102 | Ga0207678_10002428 | 3300026067 | Bacteria | 16950 |
| 103 | Ga0207708_10001562 | 3300026075 | Bacteria | 17103 |
| 104 | Ga0207702_10000189 | 3300026078 | Bacteria | 74204 |
| 105 | Ga0207702_10020077 | 3300026078 | Bacteria | 5536 |
| 106 | Ga0207648_10061692 | 3300026089 | Bacteria | 3269 |
| 107 | Ga0207674_10004461 | 3300026116 | Bacteria | 16824 |
| 108 | Ga0209974_10008399 | 3300027876 | Bacteria | 3531 |
| 109 | Ga0268266_10016842 | 3300028379 | Bacteria | 6246 |
| 110 | Ga0265336_10000014 | 3300028666 | Bacteria | 241247 |
| 111 | Ga0265336_10000032 | 3300028666 | Bacteria | 167925 |
| 112 | Ga0307517_10044883 | 3300028786 | Bacteria | 4660 |
| 113 | Ga0307515_10032662 | 3300028794 | Bacteria | 8609 |
| 114 | Ga0265324_10000685 | 3300029957 | Bacteria | 22762 |
| 115 | Ga0265324_10004275 | 3300029957 | Bacteria | 6523 |
| 116 | Ga0265327_10005515 | 3300031251 | Bacteria | 10524 |
| 117 | Ga0265327_10007833 | 3300031251 | Bacteria | 8132 |
| 118 | Ga0265316_10011490 | 3300031344 | Bacteria | 7980 |
| 119 | Ga0307509_10004767 | 3300031507 | Bacteria | 19334 |
| 120 | Ga0307509_10105033 | 3300031507 | Bacteria | 2847 |
| 121 | Ga0307408_100000272 | 3300031548 | Bacteria | 51943 |
| 122 | Ga0307508_10000280 | 3300031616 | Bacteria | 62637 |
| 123 | Ga0316575_10013486 | 3300031665 | Bacteria | 3053 |
| 124 | Ga0265314_10009713 | 3300031711 | Bacteria | 8092 |
| 125 | Ga0316578_10003640 | 3300031728 | Bacteria | 7107 |
| 126 | Ga0307516_10001232 | 3300031730 | Bacteria | 35633 |
| 127 | Ga0307516_10002056 | 3300031730 | Bacteria | 27419 |
| 128 | Ga0307516_10118140 | 3300031730 | Bacteria | 2446 |
| 129 | Ga0316583_10000595 | 3300032133 | Bacteria | 10985 |
| 130 | Ga0307510_10101933 | 3300033180 | Bacteria | 2655 |
| 131 | Ga0373934_0002954 | 3300035086 | Bacteria | 6216 |
| 132 | Ga0373931_0001828 | 3300035691 | Bacteria | 9246 |
| 133 | Ga0373927_0022298 | 3300035695 | Bacteria | 4149 |
| 134 | Ga0316582_0001711 | 3300036647 | Bacteria | 9862 |
| 135 | Ga0316584_0025946 | 3300036712 | Bacteria | 4302 |
| 136 | Ga0395898_0011467 | 3300037466 | Bacteria | 9205 |
| 137 | Ga0436364_0951399 | 3300037853 | Bacteria | 78546 |
| 138 | Ga0395901_0001122 | 3300038443 | Bacteria | 28429 |
| 139 | Ga0395901_0067858 | 3300038443 | Bacteria | 3715 |
| 140 | Ga0451577_0004182 | 3300042876 | Bacteria | 15419 |
| 141 | Ga0451577_0121703 | 3300042876 | Bacteria | 2338 |
| 142 | Ga0466972_0000519 | 3300044658 | Bacteria | 19047 |
| 143 | Ga0466965_0003511 | 3300044683 | Bacteria | 6884 |
| 144 | Ga0466966_0003660 | 3300044684 | Bacteria | 10147 |
| 145 | Ga0466964_0003109 | 3300044706 | Bacteria | 6037 |
| 146 | Ga0453684_0033687 | 3300044712 | Bacteria | 7133 |
| 147 | Ga0466971_0000836 | 3300044719 | Bacteria | 12503 |
| 148 | Ga0451576_0000029 | 3300045051 | Bacteria | 404449 |
| 149 | Ga0466958_0002614 | 3300045836 | Bacteria | 9101 |
| 150 | Ga0466967_0021006 | 3300045976 | Bacteria | 5289 |
| 151 | Ga0495583_0000018 | 3300046506 | Bacteria | 306541 |
| 152 | Ga0495606_0000615 | 3300046507 | Bacteria | 56055 |
| 153 | Ga0495630_0001977 | 3300046517 | Bacteria | 14272 |
| 154 | Ga0495645_0003811 | 3300046543 | Bacteria | 10253 |
| 155 | Ga0495668_0005458 | 3300046616 | Bacteria | 8612 |
| 156 | Ga0495625_0019902 | 3300046660 | Bacteria | 5194 |
| 157 | Ga0495624_0005244 | 3300046690 | Bacteria | 9361 |
| 158 | Ga0495649_0000051 | 3300046694 | Bacteria | 109180 |
| 159 | Ga0495589_0013740 | 3300046794 | Bacteria | 4176 |
| 160 | Ga0495589_0025772 | 3300046794 | Bacteria | 2982 |
| 161 | Ga0495674_0014473 | 3300047319 | Bacteria | 7384 |
| 162 | Ga0495687_000364 | 3300047443 | Bacteria | 56454 |
| 163 | Ga0495686_0000076 | 3300047472 | Bacteria | 206039 |
| 164 | Ga0495686_0027508 | 3300047472 | Bacteria | 3711 |
| 165 | Ga0496102_0004620 | 3300048905 | Bacteria | 11651 |
| 166 | Ga0496103_0039856 | 3300048906 | Bacteria | 2887 |
| 167 | Ga0496112_0014433 | 3300048915 | Bacteria | 7328 |
| 168 | Ga0501047_0006119 | 3300049581 | Bacteria | 11307 |
| 169 | Ga0501069_0004773 | 3300049585 | Bacteria | 7015 |
| 170 | Ga0501070_0070069 | 3300049586 | Bacteria | 2903 |
| 171 | Ga0501073_0006933 | 3300049589 | Bacteria | 8435 |
| 172 | Ga0501074_0000154 | 3300049590 | Bacteria | 35857 |
| 173 | Ga0501080_0005032 | 3300049742 | Bacteria | 11775 |
| 174 | Ga0501080_0085379 | 3300049742 | Bacteria | 2933 |
| 175 | Ga0501083_0000323 | 3300049744 | Bacteria | 30331 |
| 176 | Ga0501044_0028237 | 3300049823 | Bacteria | 5923 |
| 177 | nmdc:mga06z11_10217_c1 | 3300050494 | Bacteria | 3987 |
| 178 | Ga0500635_0000021 | 3300053080 | Bacteria | 110194 |
| 179 | Ga0500559_0000138 | 3300053136 | Bacteria | 56620 |
| 180 | Ga0500559_0003522 | 3300053136 | Bacteria | 7665 |
| 181 | Ga0500619_000063 | 3300053154 | Bacteria | 32493 |
| 182 | Ga0466962_0002583 | 3300061719 | Bacteria | 8601 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300046794 | Ga0495589_0025772 | Ga0495589_0025772_1162_2967 | 548 |
| 2 | 3300010375 | Ga0105239_10062751 | Ga0105239_100627512 | 583 |
| 3 | 3300031665 | Ga0316575_10013486 | Ga0316575_100134861 | 591 |
| 4 | 3300002773 | JGI25152J39213_1000121 | JGI25152J39213_100012141 | 594 |
| 5 | 3300002774 | JGI25150J39212_1000112 | JGI25150J39212_100011214 | 594 |
| 6 | 3300003215 | JGI25153J46596_10009606 | JGI25153J46596_100096066 | 594 |
| 7 | 3300003775 | Ga0055524_1001177 | Ga0055524_100117713 | 594 |
| 8 | 3300025245 | Ga0207425_1000021 | Ga0207425_1000021155 | 594 |
| 9 | 3300025258 | Ga0209129_1000020 | Ga0209129_1000020226 | 594 |
| 10 | 3300025297 | Ga0209758_1000077 | Ga0209758_1000077109 | 594 |
| 11 | 3300025299 | Ga0209256_1000079 | Ga0209256_100007914 | 594 |
| 12 | 3300047319 | Ga0495674_0014473 | Ga0495674_0014473_4054_6075 | 597 |
| 13 | 3300035695 | Ga0373927_0022298 | Ga0373927_0022298_964_2835 | 598 |
| 14 | 3300025295 | Ga0209564_1004009 | Ga0209564_10040098 | 600 |
| 15 | 3300009098 | Ga0105245_10011447 | Ga0105245_100114474 | 601 |
| 16 | 3300025927 | Ga0207687_10019700 | Ga0207687_100197004 | 601 |
| 17 | 3300031251 | Ga0265327_10005515 | Ga0265327_100055153 | 601 |
| 18 | 3300003771 | Ga0055526_1001604 | Ga0055526_10016045 | 604 |
| 19 | 3300003775 | Ga0055524_1001482 | Ga0055524_100148216 | 604 |
| 20 | 3300025263 | Ga0209565_1002481 | Ga0209565_10024817 | 604 |
| 21 | 3300025295 | Ga0209564_1000063 | Ga0209564_1000063216 | 604 |
| 22 | 3300025299 | Ga0209256_1000598 | Ga0209256_100059816 | 604 |
| 23 | 3300003773 | Ga0055537_1003024 | Ga0055537_10030243 | 605 |
| 24 | 3300003791 | Ga0055530_10000186 | Ga0055530_1000018639 | 605 |
| 25 | 3300025298 | Ga0209050_1000302 | Ga0209050_100030220 | 605 |
| 26 | 3300031548 | Ga0307408_100000272 | Ga0307408_10000027238 | 605 |
| 27 | 3300046517 | Ga0495630_0001977 | Ga0495630_0001977_6482_8503 | 613 |
| 28 | 3300006028 | Ga0070717_10049635 | Ga0070717_100496352 | 614 |
| 29 | 3300025928 | Ga0207700_10009964 | Ga0207700_100099644 | 614 |
| 30 | 3300044658 | Ga0466972_0000519 | Ga0466972_0000519_10545_12494 | 614 |
| 31 | 3300028794 | Ga0307515_10032662 | Ga0307515_100326628 | 616 |
| 32 | 3300049581 | Ga0501047_0006119 | Ga0501047_0006119_2047_4032 | 616 |
| 33 | 3300049585 | Ga0501069_0004773 | Ga0501069_0004773_696_2681 | 616 |
| 34 | 3300049586 | Ga0501070_0070069 | Ga0501070_0070069_809_2794 | 616 |
| 35 | 3300049589 | Ga0501073_0006933 | Ga0501073_0006933_1615_3600 | 616 |
| 36 | 3300049590 | Ga0501074_0000154 | Ga0501074_0000154_7101_9086 | 616 |
| 37 | 3300049742 | Ga0501080_0005032 | Ga0501080_0005032_5836_7821 | 616 |
| 38 | 3300049744 | Ga0501083_0000323 | Ga0501083_0000323_25046_27031 | 616 |
| 39 | 3300049823 | Ga0501044_0028237 | Ga0501044_0028237_775_2760 | 616 |
| 40 | 3300025949 | Ga0207667_10026293 | Ga0207667_100262933 | 617 |
| 41 | 3300005367 | Ga0070667_100000219 | Ga0070667_10000021917 | 618 |
| 42 | 3300005719 | Ga0068861_100000289 | Ga0068861_1000002892 | 622 |
| 43 | 3300026075 | Ga0207708_10001562 | Ga0207708_100015622 | 622 |
| 44 | 3300048915 | Ga0496112_0014433 | Ga0496112_0014433_197_2185 | 623 |
| 45 | 3300005455 | Ga0070663_100001163 | Ga0070663_1000011634 | 625 |
| 46 | 3300026067 | Ga0207678_10002428 | Ga0207678_100024284 | 625 |
| 47 | 3300038443 | Ga0395901_0067858 | Ga0395901_0067858_877_2865 | 625 |
| 48 | 3300044712 | Ga0453684_0033687 | Ga0453684_0033687_2345_4318 | 625 |
| 49 | 3300046543 | Ga0495645_0003811 | Ga0495645_0003811_4991_7039 | 625 |
| 50 | 3300047472 | Ga0495686_0000076 | Ga0495686_0000076_161006_163042 | 625 |
| 51 | 3300025945 | Ga0207679_10015032 | Ga0207679_100150322 | 626 |
| 52 | 3300036712 | Ga0316584_0025946 | Ga0316584_0025946_551_2551 | 626 |
| 53 | 3300003752 | Ga0055539_1000261 | Ga0055539_100026116 | 627 |
| 54 | 3300003756 | Ga0055533_1000026 | Ga0055533_1000026286 | 627 |
| 55 | 3300003759 | Ga0055525_1001497 | Ga0055525_10014973 | 627 |
| 56 | 3300005457 | Ga0070662_100001459 | Ga0070662_1000014594 | 627 |
| 57 | 3300025226 | Ga0209674_100024 | Ga0209674_10002417 | 627 |
| 58 | 3300025230 | Ga0209563_100069 | Ga0209563_10006917 | 627 |
| 59 | 3300025253 | Ga0209677_100092 | Ga0209677_10009285 | 627 |
| 60 | 3300025933 | Ga0207706_10044681 | Ga0207706_100446814 | 627 |
| 61 | 3300031728 | Ga0316578_10003640 | Ga0316578_100036402 | 627 |
| 62 | 3300036647 | Ga0316582_0001711 | Ga0316582_0001711_4951_6984 | 627 |
| 63 | 3300005548 | Ga0070665_100012159 | Ga0070665_1000121595 | 628 |
| 64 | 3300013307 | Ga0157372_10082345 | Ga0157372_100823452 | 628 |
| 65 | 3300028379 | Ga0268266_10016842 | Ga0268266_100168425 | 628 |
| 66 | 3300031730 | Ga0307516_10118140 | Ga0307516_101181402 | 631 |
| 67 | 3300042876 | Ga0451577_0121703 | Ga0451577_0121703_230_2209 | 634 |
| 68 | 3300029957 | Ga0265324_10004275 | Ga0265324_100042756 | 635 |
| 69 | 3300031711 | Ga0265314_10009713 | Ga0265314_100097137 | 635 |
| 70 | 3300044683 | Ga0466965_0003511 | Ga0466965_0003511_874_2880 | 635 |
| 71 | 3300044684 | Ga0466966_0003660 | Ga0466966_0003660_7303_9309 | 635 |
| 72 | 3300044706 | Ga0466964_0003109 | Ga0466964_0003109_3388_5394 | 635 |
| 73 | 3300044719 | Ga0466971_0000836 | Ga0466971_0000836_7042_9048 | 635 |
| 74 | 3300045836 | Ga0466958_0002614 | Ga0466958_0002614_334_2340 | 635 |
| 75 | 3300061719 | Ga0466962_0002583 | Ga0466962_0002583_2201_4207 | 635 |
| 76 | 3300005339 | Ga0070660_100000932 | Ga0070660_1000009328 | 636 |
| 77 | 3300005344 | Ga0070661_100014641 | Ga0070661_1000146413 | 636 |
| 78 | 3300005355 | Ga0070671_100021917 | Ga0070671_1000219175 | 636 |
| 79 | 3300005457 | Ga0070662_100004307 | Ga0070662_1000043077 | 636 |
| 80 | 3300005539 | Ga0068853_100021638 | Ga0068853_1000216382 | 636 |
| 81 | 3300005563 | Ga0068855_100004813 | Ga0068855_10000481314 | 636 |
| 82 | 3300005564 | Ga0070664_100003781 | Ga0070664_1000037818 | 636 |
| 83 | 3300005614 | Ga0068856_100017101 | Ga0068856_1000171017 | 636 |
| 84 | 3300006880 | Ga0075429_100006162 | Ga0075429_10000616210 | 636 |
| 85 | 3300013100 | Ga0157373_10001146 | Ga0157373_1000114619 | 636 |
| 86 | 3300013102 | Ga0157371_10001270 | Ga0157371_1000127012 | 636 |
| 87 | 3300013297 | Ga0157378_10030875 | Ga0157378_100308752 | 636 |
| 88 | 3300013307 | Ga0157372_10002798 | Ga0157372_100027987 | 636 |
| 89 | 3300025915 | Ga0207693_10020414 | Ga0207693_100204146 | 636 |
| 90 | 3300025919 | Ga0207657_10010916 | Ga0207657_100109167 | 636 |
| 91 | 3300025920 | Ga0207649_10025326 | Ga0207649_100253262 | 636 |
| 92 | 3300025923 | Ga0207681_10054516 | Ga0207681_100545162 | 636 |
| 93 | 3300025931 | Ga0207644_10011896 | Ga0207644_100118966 | 636 |
| 94 | 3300025933 | Ga0207706_10002095 | Ga0207706_1000209518 | 636 |
| 95 | 3300025945 | Ga0207679_10023735 | Ga0207679_100237354 | 636 |
| 96 | 3300025949 | Ga0207667_10007488 | Ga0207667_100074886 | 636 |
| 97 | 3300025949 | Ga0207667_10059322 | Ga0207667_100593224 | 636 |
| 98 | 3300026041 | Ga0207639_10093217 | Ga0207639_100932172 | 636 |
| 99 | 3300026078 | Ga0207702_10020077 | Ga0207702_100200776 | 636 |
| 100 | 3300042876 | Ga0451577_0004182 | Ga0451577_0004182_6528_8531 | 636 |
| 101 | 3300045051 | Ga0451576_0000029 | Ga0451576_0000029_62149_64140 | 636 |
| 102 | 3300048905 | Ga0496102_0004620 | Ga0496102_0004620_6975_8960 | 636 |
| 103 | 3300048906 | Ga0496103_0039856 | Ga0496103_0039856_698_2683 | 636 |
| 104 | 3300005445 | Ga0070708_100066318 | Ga0070708_1000663181 | 637 |
| 105 | 3300013104 | Ga0157370_10031257 | Ga0157370_100312574 | 637 |
| 106 | 3300021388 | Ga0213875_10000254 | Ga0213875_1000025418 | 637 |
| 107 | 3300025931 | Ga0207644_10067420 | Ga0207644_100674202 | 637 |
| 108 | 3300025940 | Ga0207691_10031686 | Ga0207691_100316861 | 637 |
| 109 | 3300027876 | Ga0209974_10008399 | Ga0209974_100083994 | 637 |
| 110 | 3300028786 | Ga0307517_10044883 | Ga0307517_100448832 | 637 |
| 111 | 3300031251 | Ga0265327_10007833 | Ga0265327_100078339 | 637 |
| 112 | 3300031507 | Ga0307509_10004767 | Ga0307509_1000476718 | 637 |
| 113 | 3300031507 | Ga0307509_10105033 | Ga0307509_101050332 | 637 |
| 114 | 3300031616 | Ga0307508_10000280 | Ga0307508_1000028059 | 637 |
| 115 | 3300032133 | Ga0316583_10000595 | Ga0316583_100005958 | 637 |
| 116 | 3300033180 | Ga0307510_10101933 | Ga0307510_101019332 | 637 |
| 117 | 3300037853 | Ga0436364_0951399 | Ga0436364_0951399_45348_47339 | 637 |
| 118 | 3300053136 | Ga0500559_0000138 | Ga0500559_0000138_6524_8503 | 637 |
| 119 | iso_pu_bacteria | 2643221660 | 2644340342 | 637 |
| 120 | 3300005563 | Ga0068855_100086376 | Ga0068855_1000863762 | 638 |
| 121 | 3300013104 | Ga0157370_10020147 | Ga0157370_100201475 | 638 |
| 122 | 3300025949 | Ga0207667_10017769 | Ga0207667_100177697 | 638 |
| 123 | 3300031344 | Ga0265316_10011490 | Ga0265316_100114904 | 638 |
| 124 | 3300031730 | Ga0307516_10002056 | Ga0307516_100020566 | 638 |
| 125 | 3300046690 | Ga0495624_0005244 | Ga0495624_0005244_3371_5350 | 638 |
| 126 | 3300047443 | Ga0495687_000364 | Ga0495687_000364_10000_12024 | 638 |
| 127 | 3300049742 | Ga0501080_0085379 | Ga0501080_0085379_216_2201 | 638 |
| 128 | 3300025256 | Ga0209759_1010553 | Ga0209759_10105532 | 639 |
| 129 | 3300028666 | Ga0265336_10000014 | Ga0265336_1000001433 | 639 |
| 130 | 3300009147 | Ga0114129_10181635 | Ga0114129_101816352 | 640 |
| 131 | 3300045976 | Ga0466967_0021006 | Ga0466967_0021006_3211_5223 | 640 |
| 132 | 3300053154 | Ga0500619_000063 | Ga0500619_000063_5492_7474 | 640 |
| 133 | 3300005459 | Ga0068867_100078317 | Ga0068867_1000783172 | 641 |
| 134 | 3300026089 | Ga0207648_10061692 | Ga0207648_100616924 | 641 |
| 135 | 3300037466 | Ga0395898_0011467 | Ga0395898_0011467_6730_8775 | 643 |
| 136 | 3300005578 | Ga0068854_100029194 | Ga0068854_1000291944 | 644 |
| 137 | 3300025256 | Ga0209759_1001151 | Ga0209759_10011518 | 644 |
| 138 | 3300025914 | Ga0207671_10016519 | Ga0207671_100165195 | 644 |
| 139 | 3300025981 | Ga0207640_10011774 | Ga0207640_100117744 | 644 |
| 140 | 3300026116 | Ga0207674_10004461 | Ga0207674_1000446119 | 644 |
| 141 | 3300050494 | nmdc:mga06z11_10217_c1 | nmdc:mga06z11_10217_c1_793_2808 | 644 |
| 142 | 3300053080 | Ga0500635_0000021 | Ga0500635_0000021_101076_103103 | 644 |
| 143 | 3300009148 | Ga0105243_10104485 | Ga0105243_101044852 | 647 |
| 144 | 3300053136 | Ga0500559_0003522 | Ga0500559_0003522_4451_6469 | 648 |
| 145 | 3300005616 | Ga0068852_100065344 | Ga0068852_1000653444 | 649 |
| 146 | 3300025909 | Ga0207705_10048034 | Ga0207705_100480342 | 649 |
| 147 | 3300031730 | Ga0307516_10001232 | Ga0307516_1000123233 | 649 |
| 148 | 3300047472 | Ga0495686_0027508 | Ga0495686_0027508_484_2505 | 649 |
| 149 | 3300025303 | Ga0209051_1002911 | Ga0209051_100291112 | 650 |
| 150 | 3300025913 | Ga0207695_10065200 | Ga0207695_100652002 | 650 |
| 151 | 3300035691 | Ga0373931_0001828 | Ga0373931_0001828_319_2355 | 650 |
| 152 | 3300002705 | JGI25156J39149_1000596 | JGI25156J39149_100059615 | 651 |
| 153 | 3300002738 | JGI25154J39366_1001305 | JGI25154J39366_10013057 | 651 |
| 154 | 3300002741 | JGI25157J39369_1000045 | JGI25157J39369_100004549 | 651 |
| 155 | 3300003761 | Ga0055535_1000056 | Ga0055535_100005617 | 651 |
| 156 | 3300003763 | Ga0055529_1000840 | Ga0055529_100084015 | 651 |
| 157 | 3300005327 | Ga0070658_10030417 | Ga0070658_100304174 | 651 |
| 158 | 3300005329 | Ga0070683_100042940 | Ga0070683_1000429403 | 651 |
| 159 | 3300005535 | Ga0070684_100022898 | Ga0070684_1000228984 | 651 |
| 160 | 3300005614 | Ga0068856_100000289 | Ga0068856_10000028949 | 651 |
| 161 | 3300010375 | Ga0105239_10016776 | Ga0105239_100167766 | 651 |
| 162 | 3300013105 | Ga0157369_10034865 | Ga0157369_100348653 | 651 |
| 163 | 3300025231 | Ga0207427_100214 | Ga0207427_10021427 | 651 |
| 164 | 3300025242 | Ga0209258_100071 | Ga0209258_100071106 | 651 |
| 165 | 3300025246 | Ga0209646_1000012 | Ga0209646_1000012489 | 651 |
| 166 | 3300025250 | Ga0209026_1000004 | Ga0209026_1000004131 | 651 |
| 167 | 3300025253 | Ga0209677_100595 | Ga0209677_1005956 | 651 |
| 168 | 3300025253 | Ga0209677_102059 | Ga0209677_1020595 | 651 |
| 169 | 3300025256 | Ga0209759_1000003 | Ga0209759_1000003597 | 651 |
| 170 | 3300025256 | Ga0209759_1000756 | Ga0209759_100075613 | 651 |
| 171 | 3300025272 | Ga0209455_1000030 | Ga0209455_1000030165 | 651 |
| 172 | 3300025949 | Ga0207667_10018940 | Ga0207667_100189406 | 651 |
| 173 | 3300026078 | Ga0207702_10000189 | Ga0207702_1000018943 | 651 |
| 174 | 3300028666 | Ga0265336_10000032 | Ga0265336_1000003219 | 651 |
| 175 | 3300029957 | Ga0265324_10000685 | Ga0265324_100006858 | 651 |
| 176 | 3300035086 | Ga0373934_0002954 | Ga0373934_0002954_3761_5809 | 651 |
| 177 | 3300038443 | Ga0395901_0001122 | Ga0395901_0001122_3176_5224 | 651 |
| 178 | 3300046506 | Ga0495583_0000018 | Ga0495583_0000018_165527_167572 | 651 |
| 179 | 3300046507 | Ga0495606_0000615 | Ga0495606_0000615_32284_34329 | 651 |
| 180 | 3300046616 | Ga0495668_0005458 | Ga0495668_0005458_2029_4074 | 651 |
| 181 | 3300046660 | Ga0495625_0019902 | Ga0495625_0019902_1741_3786 | 651 |
| 182 | 3300046694 | Ga0495649_0000051 | Ga0495649_0000051_36190_38235 | 651 |
| 183 | 3300046794 | Ga0495589_0013740 | Ga0495589_0013740_190_2235 | 651 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6zmq-assembly1.cif.gz_A | cytochrome c heme lyase ccmf | 0.8524 | 1 | 618 |
| 6zmq-assembly1.cif.gz_A | cytochrome c heme lyase ccmf | 0.8344 | 1 | 618 |
| 7s9y-assembly1.cif.gz_A | helicobacter hepaticus ccsba open conformation | 0.7193 | 4 | 339 |
| 3vd3-assembly1.cif.gz_D | error: ('connection aborted.', connectionreseterror(104, 'connection reset by peer')) | 0.5634 | 515 | 580 |
| 3cax-assembly1.cif.gz_A-2 | crystal structure of uncharacterized protein pf0695 | 0.5278 | 3 | 177 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| af_A0A0R0H600_74_264_1.20.120.80 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle | 0.6049 | 2 | 144 | 1.20.120.80 |
| af_P14575_77_269_1.20.120.80 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A);Cytochrome c oxidase, subunit III, four-helix bundle | 0.6047 | 2 | 145 | 1.20.120.80 |
| af_Q95XJ2_996_1266_3.90.190.10 | Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily | 0.59 | 506 | 556 | 3.90.190.10 |
| af_Q95Y26_80_379_3.90.190.10 | Alpha Beta;Alpha-Beta Complex;Protein-Tyrosine Phosphatase; Chain A;Protein tyrosine phosphatase superfamily | 0.579 | 506 | 550 | 3.90.190.10 |
| af_Q9VIU0_15_211_1.20.120.1770 | Mainly Alpha;Up-down Bundle;Four Helix Bundle (Hemerythrin (Met), subunit A); | 0.575 | 95 | 331 | 1.20.120.1770 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A351GKM9-F1-model_v4 | Heme lyase NrfEFG subunit NrfE | 0.997 | 1 | 159 |
GO:0015232
GO:0016020 GO:0016829 GO:0017004 |
| AF-A0A356HL51-F1-model_v4 | deleted | 0.9961 | 41 | 231 |
|
| AF-A0A849E686-F1-model_v4 | C-type cytochrome biogenesis protein CcmF | 0.9953 | 1 | 148 |
GO:0015232
GO:0016020 GO:0017004 |
| AF-A0A3D3B290-F1-model_v4 | Heme lyase NrfEFG subunit NrfE | 0.9947 | 1 | 200 |
GO:0005886
GO:0015232 GO:0016829 GO:0017004 GO:0020037 |
| AF-A0A2W6U6N5-F1-model_v4 | C-type cytochrome biogenesis protein CcmF | 0.9935 | 1 | 157 |
GO:0015232
GO:0016020 GO:0017004 |
Predicted Structure (AlphaFold2)
Powered by PDBe Molstar