F280849

General Info

Members Datasets Scaffolds Average Seq Length
183 140 366 360

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10022397|Ga0157370_100223975
Length 400
Sequence VKANFLAGTAVEFTQSRSLKACGPSAPDLQEEMNMFSMTRRNFLLSSAAGATVGFGPELKAFAQDAVLKVGVVHQGPIAENGWEAFHARAWRALEAKSGGKVKVTVLDNVQQAQDAERVFRQLASQGHQLVIGTTFSQYATLRKLAPTLPKTRFECCAGIATLANLGVYEARSYEGTYLTGIAAGKMTKSNVLGWVGAFPVPQVIYGLNAFMLGARSVNPKVACKLIWANAWSDPAKEKDAINALVAQGADVLSGSPNTPVQGLAAEEKGVWSIGSSGDFSGFVKNKQLASFELDWTSAYAEAAQGVIDGKWKAESKWRGLGPNGFVRMTTQNAALPAEVRALMAEKEKAIVEGKFHPFAGEIKDQSGKVRIAAGAKMPDAELRGIDWLVEGVQGQLPRT

Samples

Sample ID Description Type Environment
1 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
2 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
3 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
4 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
5 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
6 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
11 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
12 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
13 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
14 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
15 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
16 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
17 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
18 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
19 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
20 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
21 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
22 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
27 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
28 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
33 3300025208 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
34 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
35 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
36 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
37 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
38 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
39 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
40 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
41 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
42 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
43 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
51 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
52 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
53 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
54 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
55 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
56 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
57 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
58 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
59 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
60 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
61 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
62 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
63 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
66 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
67 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
68 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
69 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
70 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
71 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
72 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
73 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
74 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
75 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
76 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
77 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
78 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
79 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
80 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
81 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
82 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
83 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
84 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
85 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
86 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
87 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
88 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
89 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
90 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
91 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
92 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
93 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
94 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
95 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
96 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
97 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
98 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
99 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
100 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
101 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
102 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
103 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
104 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
105 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
106 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
107 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
108 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
109 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
110 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
111 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
112 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
113 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
114 2512564039 Paenibacillus mucilaginosus 3016 Isolate Rhizosphere
115 2548877040 Paenibacillus sonchi X19-5 Isolate Rhizosphere
116 2571042143 Paenibacillus graminis RSA19 Isolate Unclassified
117 2571042588 Paenibacillus zanthoxyli JH29 Isolate Unclassified
118 2576861424 Paenibacillus sabinae T27 Isolate Rhizosphere
119 2579778775 Paenibacillus durus P3L-5 Isolate Unclassified
120 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
121 2585427594 Rhizobium sp. YR528 Isolate Rhizosphere
122 2600255286 Paenibacillus sp. NFR01 Isolate Rhizoplane
123 2619619294 Paenibacillus durus ATCC 35681 Isolate Unclassified
124 2728368933 Paenibacillus jilunlii DSM 23019 Isolate Rhizosphere
125 2738541293 Rhizobium sp. GV031 Isolate Unclassified
126 2864997549 Paenibacillus sp. R-72005 Isolate Unclassified
127 2881636855 Paenibacillus sp. 7197 Isolate Rhizosphere
128 2904113452 Paenibacillus paridis py1325 Isolate Unclassified
129 2919100787 Rhizobium sp. 1399 Isolate Rhizosphere
130 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
131 2938649242 Paenibacillus helianthi P26E Isolate Rhizosphere
132 2968558590 Paenibacillus sp. P3E Isolate Rhizosphere
133 2971403814 Paenibacillus tritici LMG 29502 Isolate Unclassified
134 2971511577 Paenibacillus apii 7124 Isolate Rhizosphere
135 2980125574 Paenibacillus sp. tmac-D7 Isolate Unclassified
136 2980176882 Paenibacillus apii 7028 Isolate Rhizosphere
137 2988225383 Paenibacillus sp. P46E Isolate Rhizosphere
138 2996632988 Paenibacillus sp. P32E Isolate Rhizosphere
139 3003930520 Sinorhizobium sp. BG8 Isolate Unclassified
140 8054465665 Paenibacillus sonchi IIRRBNF1 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 84.15
Metatranscriptomes 1.09
Isolates 14.75

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.67
Nodule 0
Rhizoplane 1.09
Rhizosphere 57.92
Stem 0
Stem Tuber 0
Unclassified 1.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157370_10022397 3300013104 Bacteria 6287
2 JGI25158J39367_1000355 3300002739 Bacteria 9924
3 JGI25152J39213_1000592 3300002773 Bacteria 19536
4 JGI25152J39213_1003502 3300002773 Bacteria 5325
5 JGI25150J39212_1000237 3300002774 Bacteria 29842
6 JGI25159J45721_1000861 3300002987 Bacteria 13222
7 JGI25151J46595_10000144 3300003187 Bacteria 94653
8 JGI25153J46596_10004492 3300003215 Bacteria 7513
9 JGI25153J46596_10033022 3300003215 Bacteria 1715
10 rootL2_10167452 3300003322 Bacteria 1883
11 JGI25160J50197_1009845 3300003354 Bacteria 3507
12 JGI25161J50226_1000010 3300003374 Bacteria 214823
13 Ga0055526_1016959 3300003771 Bacteria 2813
14 Ga0055524_1002107 3300003775 Bacteria 10514
15 Ga0055536_1000923 3300003781 Bacteria 18974
16 Ga0055528_1001599 3300003790 Bacteria 13383
17 Ga0055540_1020441 3300003792 Bacteria 1750
18 Ga0055543_1000253 3300004625 Bacteria 40518
19 Ga0065165_1017001 3300005262 Bacteria 2698
20 Ga0065707_10202710 3300005295 Bacteria 1303
21 Ga0070670_100063836 3300005331 Bacteria 3160
22 Ga0070668_100005240 3300005347 Bacteria 9620
23 Ga0070669_100013334 3300005353 Bacteria 5842
24 Ga0070674_100078955 3300005356 Bacteria 2346
25 Ga0070659_100042424 3300005366 Bacteria 3556
26 Ga0068861_100390161 3300005719 Bacteria 1233
27 Ga0075365_10051669 3300006038 Bacteria 2716
28 Ga0075369_10075725 3300006186 Bacteria 1487
29 Ga0105249_10504429 3300009553 Bacteria 1255
30 Ga0157371_10051393 3300013102 Bacteria 2929
31 Ga0157369_10023280 3300013105 Bacteria 6901
32 Ga0157372_10072405 3300013307 Bacteria 3884
33 Ga0157372_10193125 3300013307 Bacteria 2358
34 Ga0157380_10123637 3300014326 Bacteria 2196
35 Ga0183362_10001 3300015683 Bacteria 2046624
36 Ga0209436_100025 3300025208 Bacteria 93575
37 Ga0207425_1000086 3300025245 Bacteria 94681
38 Ga0209129_1000174 3300025258 Bacteria 94671
39 Ga0209129_1006308 3300025258 Bacteria 3883
40 Ga0209673_1002640 3300025273 Bacteria 12022
41 Ga0209673_1004863 3300025273 Bacteria 7016
42 Ga0209673_1006220 3300025273 Bacteria 5826
43 Ga0209130_1000001 3300025284 Bacteria 831557
44 Ga0209025_1000367 3300025294 Bacteria 95238
45 Ga0209564_1001131 3300025295 Bacteria 31317
46 Ga0209758_1000305 3300025297 Bacteria 95644
47 Ga0209758_1034641 3300025297 Bacteria 2004
48 Ga0207426_1000045 3300025302 Bacteria 422847
49 Ga0209051_1022687 3300025303 Bacteria 2635
50 Ga0207645_10179917 3300025907 Bacteria 1387
51 Ga0207705_10044345 3300025909 Bacteria 3196
52 Ga0207681_10106611 3300025923 Bacteria 2031
53 Ga0207690_10201798 3300025932 Bacteria 1511
54 Ga0207712_10237045 3300025961 Bacteria 1468
55 Ga0207674_10399551 3300026116 Bacteria 1328
56 Ga0207675_100249915 3300026118 Bacteria 1716
57 Ga0265320_10017990 3300031240 Unclassified 3905
58 Ga0307408_100001601 3300031548 Bacteria 16738
59 Ga0307408_100130532 3300031548 Bacteria 1959
60 Ga0316575_10007710 3300031665 Bacteria 3905
61 Ga0316579_10030088 3300031691 Bacteria 2479
62 Ga0316579_10040111 3300031691 Bacteria 2171
63 Ga0316576_10002005 3300031727 Bacteria 11400
64 Ga0316576_10005618 3300031727 Bacteria 7698
65 Ga0316576_10010390 3300031727 Bacteria 6046
66 Ga0316576_10021334 3300031727 Bacteria 4478
67 Ga0316578_10001361 3300031728 Bacteria 9848
68 Ga0316578_10028424 3300031728 Bacteria 3166
69 Ga0307405_10001413 3300031731 Bacteria 10109
70 Ga0307405_10004466 3300031731 Bacteria 6613
71 Ga0307405_10005066 3300031731 Bacteria 6306
72 Ga0316577_10052621 3300031733 Bacteria 2272
73 Ga0307413_10137915 3300031824 Bacteria 1680
74 Ga0307413_10143920 3300031824 Bacteria 1651
75 Ga0307410_10015402 3300031852 Bacteria 4534
76 Ga0307410_10018897 3300031852 Bacteria 4177
77 Ga0307406_10021266 3300031901 Bacteria 3836
78 Ga0307406_10079366 3300031901 Bacteria 2176
79 Ga0307406_10083571 3300031901 Bacteria 2129
80 Ga0307407_10012198 3300031903 Bacteria 4123
81 Ga0307412_10004832 3300031911 Bacteria 7519
82 Ga0307412_10057843 3300031911 Bacteria 2590
83 Ga0307409_100002501 3300031995 Bacteria 9630
84 Ga0307409_100006269 3300031995 Bacteria 6966
85 Ga0307416_100004752 3300032002 Bacteria 8243
86 Ga0307416_100065103 3300032002 Bacteria 2993
87 Ga0307414_10008688 3300032004 Bacteria 5784
88 Ga0307414_10025314 3300032004 Bacteria 3799
89 Ga0307411_10050825 3300032005 Bacteria 2701
90 Ga0307415_100001138 3300032126 Bacteria 12420
91 Ga0316583_10002654 3300032133 Bacteria 6250
92 Ga0316580_10010880 3300032139 Bacteria 2756
93 Ga0316580_10011068 3300032139 Bacteria 2733
94 Ga0316586_1009221 3300033527 Bacteria 1475
95 Ga0316588_1008424 3300033528 Bacteria 2122
96 Ga0316574_0003675 3300035398 Bacteria 7944
97 Ga0316574_0040743 3300035398 Bacteria 2860
98 Ga0316574_0096137 3300035398 Bacteria 1892
99 Ga0316582_0013088 3300036647 Bacteria 4657
100 Ga0316582_0013808 3300036647 Bacteria 4560
101 Ga0316582_0066052 3300036647 Bacteria 2331
102 Ga0316584_0002114 3300036712 Bacteria 12430
103 Ga0316584_0294061 3300036712 Bacteria 1177
104 Ga0395899_0025970 3300037312 Bacteria 4420
105 Ga0395898_0074998 3300037466 Bacteria 3267
106 Ga0395905_0170191 3300037471 Bacteria 2046
107 Ga0316581_0040463 3300037588 Bacteria 1419
108 Ga0395901_0524135 3300038443 Bacteria 1203
109 Ga0400484_02734 3300038725 Bacteria 2374
110 Ga0400490_30744 3300038726 Bacteria 133210
111 Ga0400488_51496 3300038741 Bacteria 9365
112 Ga0400483_240334 3300039062 Bacteria 2499
113 Ga0400489_64441 3300039093 Unclassified 2919
114 Ga0400487_35124 3300039110 Bacteria 10872
115 Ga0439465_0048609 3300041413 Bacteria 1384
116 Ga0439449_0029613 3300042007 Bacteria 2040
117 Ga0450890_007067 3300042127 Bacteria 1431
118 Ga0439458_0015490 3300042157 Bacteria 1728
119 Ga0453683_0002969 3300044673 Bacteria 12730
120 Ga0453684_0002952 3300044712 Bacteria 39890
121 Ga0453684_0017014 3300044712 Bacteria 11296
122 Ga0453684_0056053 3300044712 Bacteria 5117
123 Ga0451576_0024943 3300045051 Bacteria 6451
124 Ga0495590_0013208 3300046457 Bacteria 3043
125 Ga0495606_0095032 3300046507 Bacteria 1826
126 Ga0495610_0042919 3300046512 Bacteria 2257
127 Ga0495625_0036917 3300046660 Bacteria 3587
128 Ga0495660_0103632 3300046810 Bacteria 1461
129 Ga0495672_0026192 3300047320 Bacteria 3722
130 Ga0495626_0077743 3300048091 Bacteria 1479
131 Ga0496100_0220109 3300048903 Bacteria 1393
132 Ga0496116_0000216 3300048919 Bacteria 108542
133 Ga0496116_0023266 3300048919 Bacteria 4618
134 Ga0496116_0053562 3300048919 Bacteria 2664
135 Ga0496116_0060412 3300048919 Bacteria 2459
136 Ga0496116_0074095 3300048919 Bacteria 2142
137 Ga0496117_0008171 3300048920 Bacteria 9988
138 Ga0496117_0011297 3300048920 Bacteria 8008
139 Ga0496117_0024392 3300048920 Bacteria 4785
140 Ga0496118_0003552 3300048921 Bacteria 19462
141 Ga0496118_0013680 3300048921 Bacteria 7656
142 Ga0496118_0017979 3300048921 Bacteria 6405
143 Ga0496119_0031803 3300048922 Bacteria 3529
144 Ga0496120_0137832 3300048923 Bacteria 1242
145 Ga0496121_0066011 3300048924 Bacteria 2940
146 Ga0496122_0000861 3300048925 Bacteria 57060
147 Ga0496122_0009151 3300048925 Bacteria 10494
148 Ga0496122_0009299 3300048925 Bacteria 10388
149 Ga0496122_0060457 3300048925 Bacteria 2790
150 Ga0496123_0016956 3300048926 Bacteria 5883
151 Ga0496124_0000023 3300048927 Bacteria 415226
152 Ga0496124_0025645 3300048927 Bacteria 5335
153 Ga0496125_0045736 3300048928 Bacteria 3679
154 nmdc:mga0k408_99665_c1 3300050493 Bacteria 1712
155 Ga0500622_0000215 3300053156 Bacteria 61272
156 Ga0500634_0000001 3300053161 Bacteria 258285
157 2512731281 2512564039 Bacteria 8739048
158 2550905492 2548877040 Bacteria 7507281
159 2571530334 2571042143 Bacteria 6986194
160 2573040816 2571042588 Bacteria 5045676
161 2578335903 2576861424 Bacteria 5270569
162 2580930389 2579778775 Bacteria 5360914
163 2585203943 2582581294 Bacteria 6626667
164 2585847649 2585427594 Bacteria 6180594
165 2601639557 2600255286 Bacteria 5390125
166 2621274094 2619619294 Bacteria 5575484
167 2728533453 2728368933 Bacteria 7044283
168 2738803096 2738541293 Bacteria 7065685
169 2864999221 2864997549 Bacteria 5139696
170 2881638396 2881636855 Bacteria 5205297
171 2904115205 2904113452 Bacteria 7796941
172 2919107468 2919100787 Bacteria 7710546
173 2928120371 2928115317 Bacteria 6477646
174 2938654197 2938649242 Bacteria 7118381
175 2968562073 2968558590 Bacteria 6956864
176 2971408439 2971403814 Bacteria 7370929
177 2971514715 2971511577 Bacteria 5404012
178 2980126667 2980125574 Bacteria 5567337
179 2980180823 2980176882 Bacteria 5397533
180 2988228679 2988225383 Bacteria 7221625
181 2996636144 2996632988 Bacteria 6921523
182 3003935705 3003930520 Bacteria 5667563
183 8054466784 8054465665 Bacteria 7323556
184 Ga0157370_10022397
185 JGI25158J39367_1000355
186 JGI25152J39213_1000592
187 JGI25152J39213_1003502
188 JGI25150J39212_1000237
189 JGI25159J45721_1000861
190 JGI25151J46595_10000144
191 JGI25153J46596_10004492
192 JGI25153J46596_10033022
193 rootL2_10167452
194 JGI25160J50197_1009845
195 JGI25161J50226_1000010
196 Ga0055526_1016959
197 Ga0055524_1002107
198 Ga0055536_1000923
199 Ga0055528_1001599
200 Ga0055540_1020441
201 Ga0055543_1000253
202 Ga0065165_1017001
203 Ga0065707_10202710
204 Ga0070670_100063836
205 Ga0070668_100005240
206 Ga0070669_100013334
207 Ga0070674_100078955
208 Ga0070659_100042424
209 Ga0068861_100390161
210 Ga0075365_10051669
211 Ga0075369_10075725
212 Ga0105249_10504429
213 Ga0157371_10051393
214 Ga0157369_10023280
215 Ga0157372_10072405
216 Ga0157372_10193125
217 Ga0157380_10123637
218 Ga0183362_10001
219 Ga0209436_100025
220 Ga0207425_1000086
221 Ga0209129_1000174
222 Ga0209129_1006308
223 Ga0209673_1002640
224 Ga0209673_1004863
225 Ga0209673_1006220
226 Ga0209130_1000001
227 Ga0209025_1000367
228 Ga0209564_1001131
229 Ga0209758_1000305
230 Ga0209758_1034641
231 Ga0207426_1000045
232 Ga0209051_1022687
233 Ga0207645_10179917
234 Ga0207705_10044345
235 Ga0207681_10106611
236 Ga0207690_10201798
237 Ga0207712_10237045
238 Ga0207674_10399551
239 Ga0207675_100249915
240 Ga0265320_10017990
241 Ga0307408_100001601
242 Ga0307408_100130532
243 Ga0316575_10007710
244 Ga0316579_10030088
245 Ga0316579_10040111
246 Ga0316576_10002005
247 Ga0316576_10005618
248 Ga0316576_10010390
249 Ga0316576_10021334
250 Ga0316578_10001361
251 Ga0316578_10028424
252 Ga0307405_10001413
253 Ga0307405_10004466
254 Ga0307405_10005066
255 Ga0316577_10052621
256 Ga0307413_10137915
257 Ga0307413_10143920
258 Ga0307410_10015402
259 Ga0307410_10018897
260 Ga0307406_10021266
261 Ga0307406_10079366
262 Ga0307406_10083571
263 Ga0307407_10012198
264 Ga0307412_10004832
265 Ga0307412_10057843
266 Ga0307409_100002501
267 Ga0307409_100006269
268 Ga0307416_100004752
269 Ga0307416_100065103
270 Ga0307414_10008688
271 Ga0307414_10025314
272 Ga0307411_10050825
273 Ga0307415_100001138
274 Ga0316583_10002654
275 Ga0316580_10010880
276 Ga0316580_10011068
277 Ga0316586_1009221
278 Ga0316588_1008424
279 Ga0316574_0003675
280 Ga0316574_0040743
281 Ga0316574_0096137
282 Ga0316582_0013088
283 Ga0316582_0013808
284 Ga0316582_0066052
285 Ga0316584_0002114
286 Ga0316584_0294061
287 Ga0395899_0025970
288 Ga0395898_0074998
289 Ga0395905_0170191
290 Ga0316581_0040463
291 Ga0395901_0524135
292 Ga0400484_02734
293 Ga0400490_30744
294 Ga0400488_51496
295 Ga0400483_240334
296 Ga0400489_64441
297 Ga0400487_35124
298 Ga0439465_0048609
299 Ga0439449_0029613
300 Ga0450890_007067
301 Ga0439458_0015490
302 Ga0453683_0002969
303 Ga0453684_0002952
304 Ga0453684_0017014
305 Ga0453684_0056053
306 Ga0451576_0024943
307 Ga0495590_0013208
308 Ga0495606_0095032
309 Ga0495610_0042919
310 Ga0495625_0036917
311 Ga0495660_0103632
312 Ga0495672_0026192
313 Ga0495626_0077743
314 Ga0496100_0220109
315 Ga0496116_0000216
316 Ga0496116_0023266
317 Ga0496116_0053562
318 Ga0496116_0060412
319 Ga0496116_0074095
320 Ga0496117_0008171
321 Ga0496117_0011297
322 Ga0496117_0024392
323 Ga0496118_0003552
324 Ga0496118_0013680
325 Ga0496118_0017979
326 Ga0496119_0031803
327 Ga0496120_0137832
328 Ga0496121_0066011
329 Ga0496122_0000861
330 Ga0496122_0009151
331 Ga0496122_0009299
332 Ga0496122_0060457
333 Ga0496123_0016956
334 Ga0496124_0000023
335 Ga0496124_0025645
336 Ga0496125_0045736
337 nmdc:mga0k408_99665_c1
338 Ga0500622_0000215
339 Ga0500634_0000001
340 2512731281
341 2550905492
342 2571530334
343 2573040816
344 2578335903
345 2580930389
346 2585203943
347 2585847649
348 2601639557
349 2621274094
350 2728533453
351 2738803096
352 2864999221
353 2881638396
354 2904115205
355 2919107468
356 2928120371
357 2938654197
358 2968562073
359 2971408439
360 2971514715
361 2980126667
362 2980180823
363 2988228679
364 2996636144
365 3003935705
366 8054466784

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02608

Bmp

ABC transporter substrate-binding protein PnrA-like

67

357

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6pi5-assembly4.cif.gz_D the evolving story of atzt, a periplasmic binding protein 0.966 44 354
3s99-assembly1.cif.gz_A crystal structure of a basic membrane lipoprotein from brucella melitensis, iodide soak 0.9331 46 357
6pi5-assembly4.cif.gz_D the evolving story of atzt, a periplasmic binding protein 0.9036 44 354
3s99-assembly1.cif.gz_A crystal structure of a basic membrane lipoprotein from brucella melitensis, iodide soak 0.8815 46 357
2fqy-assembly1.cif.gz_A pnra from treponema pallidum complexed with adenosine. 0.8716 45 335
ID Description Score Start End Superfamily
3s99A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9277 46 149 3.40.50.2300
3s99A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8517 150 357 3.40.50.2300
4p98A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8487 48 149 3.40.50.2300
3s99A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8475 150 357 3.40.50.2300
2hqbA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8372 155 337 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A3A1VR26-F1-model_v4 deleted 0.9628 54 294
AF-A0A645HGQ5-F1-model_v4 Purine-binding protein 0.9615 165 358 GO:0005886
AF-A0A656K460-F1-model_v4 Bmp family protein 0.9581 132 292 GO:0005886
AF-A0A356AUD0-F1-model_v4 BMP family ABC transporter substrate-binding protein 0.9578 164 357 GO:0005886
AF-A0A662RMI0-F1-model_v4 ABC transporter substrate-binding protein PnrA-like domain-containing protein 0.9571 152 357 GO:0005886

Map