F279315
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 182 | 144 | 166 | 98 |
Family's Representative Sequence
| Representative Sequence | 3300028558|Ga0265326_10029220|Ga0265326_100292203 |
| Length | 109 |
| Sequence | MASRRNTKSERPSPKESFSRWDPADHLKSPSDIAAYLEACMEEAGDDPAFIAAALGDVARARGMAQLARKTGIAREGLYKALAPDGNPSLGTVLKVMKALGLKLTPKAA |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2574179768 | Azoarcus communis DSM 12120 | Isolate | Unclassified |
| 2 | 2593339239 | Luteibacter sp. UNCMF331Sha3.1 | Isolate | Unclassified |
| 3 | 2599185306 | Pseudomonas sp. NFACC16-2 | Isolate | Rhizoplane |
| 4 | 2599185313 | Pseudomonas sp. NFACC05-1 | Isolate | Rhizoplane |
| 5 | 2599185324 | Pseudomonas sp. NFACC46-3 | Isolate | Rhizoplane |
| 6 | 2808606384 | Burkholderia sp. SJZ089 | Isolate | Rhizosphere |
| 7 | 2808606390 | Burkholderia sp. SJZ115 | Isolate | Rhizosphere |
| 8 | 2808606391 | Burkholderia sp. SJZ091 | Isolate | Rhizosphere |
| 9 | 2842324504 | Paraburkholderia fungorum SEMIA 4007 | Isolate | Nodule |
| 10 | 2842348783 | Paraburkholderia fungorum SEMIA 4013 | Isolate | Nodule |
| 11 | 2842454564 | Paraburkholderia fungorum SEMIA 4056 | Isolate | Nodule |
| 12 | 2852657418 | Pseudomonas sp. JAI115 | Isolate | Rhizosphere |
| 13 | 2895395659 | Rhodanobacter sp. T12-5 | Isolate | Unclassified |
| 14 | 2919404418 | Luteibacter sp. 3190 | Isolate | Unclassified |
| 15 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 16 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 17 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 18 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 19 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 20 | 3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 22 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 23 | 3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Metagenome | Rhizosphere |
| 24 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 25 | 3300006846 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 | Metagenome | Rhizosphere |
| 26 | 3300006847 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Metagenome | Rhizosphere |
| 27 | 3300009092 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG | Metagenome | Rhizosphere |
| 28 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 29 | 3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Metagenome | Rhizosphere |
| 30 | 3300013104 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG | Metagenome | Rhizosphere |
| 31 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 32 | 3300014497 | Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG | Metagenome | Rhizosphere |
| 33 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 34 | 3300025302 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) | Metagenome | Endosphere |
| 35 | 3300025711 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 36 | 3300025728 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 37 | 3300025735 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 38 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 39 | 3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 40 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 41 | 3300025981 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 42 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 43 | 3300026089 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300028558 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG | Metagenome | Rhizosphere |
| 46 | 3300028563 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG | Metagenome | Rhizosphere |
| 47 | 3300028573 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG | Metagenome | Rhizosphere |
| 48 | 3300028786 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM | Metagenome | Unclassified |
| 49 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 50 | 3300029957 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG | Metagenome | Rhizosphere |
| 51 | 3300031235 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG | Metagenome | Rhizosphere |
| 52 | 3300031239 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG | Metagenome | Rhizosphere |
| 53 | 3300031240 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG | Metagenome | Rhizosphere |
| 54 | 3300031241 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG | Metagenome | Rhizosphere |
| 55 | 3300031250 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG | Metagenome | Rhizosphere |
| 56 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 57 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 58 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 59 | 3300031507 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM | Metagenome | Unclassified |
| 60 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 61 | 3300031595 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG | Metagenome | Rhizosphere |
| 62 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 63 | 3300031712 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG | Metagenome | Rhizosphere |
| 64 | 3300031731 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 | Metagenome | Rhizosphere |
| 65 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 66 | 3300031911 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 | Metagenome | Rhizosphere |
| 67 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 68 | 3300035083 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 | Metagenome | Rhizosphere |
| 69 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 70 | 3300035171 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 | Metagenome | Rhizosphere |
| 71 | 3300035410 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 | Metagenome | Rhizosphere |
| 72 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 73 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 74 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 75 | 3300035724 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 | Metagenome | Rhizosphere |
| 76 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 77 | 3300036401 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 78 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 79 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 80 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 81 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 82 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 83 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 84 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 85 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 86 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 87 | 3300044656 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R | Metagenome | Rhizosphere |
| 88 | 3300044673 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED | Metagenome | Rhizosphere |
| 89 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 90 | 3300044684 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R | Metagenome | Rhizosphere |
| 91 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 92 | 3300044694 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R | Metagenome | Rhizosphere |
| 93 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 94 | 3300045049 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R | Metagenome | Rhizosphere |
| 95 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 96 | 3300045836 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R | Metagenome | Rhizosphere |
| 97 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 98 | 3300046491 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300046522 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046524 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046683 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300047323 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 104 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 105 | 3300048917 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 | Metagenome | Rhizoplane |
| 106 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 107 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 108 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 109 | 3300048928 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 | Metagenome | Unclassified |
| 110 | 3300048929 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 | Metagenome | Unclassified |
| 111 | 3300049460 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere | Metagenome | Rhizosphere |
| 112 | 3300049568 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 115 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049572 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 117 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 118 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 119 | 3300049575 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 120 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 121 | 3300049580 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 122 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 123 | 3300049583 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 | Metagenome | Rhizosphere |
| 124 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 125 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 126 | 3300049588 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 | Metagenome | Rhizosphere |
| 127 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 128 | 3300049686 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control | Metagenome | Rhizosphere |
| 129 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 130 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 131 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 132 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 133 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 134 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 135 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 136 | 3300050510 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation | Metagenome | Rhizosphere |
| 137 | 3300053091 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere | Metagenome | Endosphere |
| 138 | 3300053096 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere | Metagenome | Endosphere |
| 139 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 140 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 141 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
| 142 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 143 | 8020953355 | Burkholderia sp. BE24 | Isolate | Rhizosphere |
| 144 | 8039098773 | Burkholderia multivorans MSMB612WGS | Isolate | Unclassified |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 91.21 |
| Metatranscriptomes | 0 |
| Isolates | 8.79 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 3.85 |
| Nodule | 1.65 |
| Rhizoplane | 3.85 |
| Rhizosphere | 81.87 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 8.79 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0065704_10080820 | 3300005289 | Bacteria | 3874 |
| 2 | Ga0070682_100222790 | 3300005337 | Bacteria | 1343 |
| 3 | Ga0070669_101348760 | 3300005353 | Unclassified | 618 |
| 4 | Ga0070674_101149246 | 3300005356 | Unclassified | 687 |
| 5 | Ga0070663_100540275 | 3300005455 | Bacteria | 973 |
| 6 | Ga0070678_100453524 | 3300005456 | Bacteria | 1123 |
| 7 | Ga0068867_100170256 | 3300005459 | Bacteria | 1724 |
| 8 | Ga0068867_102262021 | 3300005459 | Bacteria | 516 |
| 9 | Ga0068855_102554639 | 3300005563 | Unclassified | 507 |
| 10 | Ga0068854_100044627 | 3300005578 | Bacteria | 3148 |
| 11 | Ga0075364_10440012 | 3300006051 | Bacteria | 891 |
| 12 | Ga0075430_100053003 | 3300006846 | Bacteria | 3416 |
| 13 | Ga0075431_100163005 | 3300006847 | Bacteria | 2292 |
| 14 | Ga0105250_10016006 | 3300009092 | Bacteria | 3062 |
| 15 | Ga0105240_10198482 | 3300009093 | Bacteria | 2353 |
| 16 | Ga0105240_11473896 | 3300009093 | Unclassified | 714 |
| 17 | Ga0105246_10959891 | 3300011119 | Bacteria | 771 |
| 18 | Ga0157370_10043415 | 3300013104 | Bacteria | 4327 |
| 19 | Ga0157372_11078695 | 3300013307 | Bacteria | 929 |
| 20 | Ga0182008_10088367 | 3300014497 | Bacteria | 1527 |
| 21 | Ga0213872_10051676 | 3300021361 | Bacteria | 1865 |
| 22 | Ga0207426_1040025 | 3300025302 | Bacteria | 1463 |
| 23 | Ga0207696_1008213 | 3300025711 | Bacteria | 4017 |
| 24 | Ga0207655_1000175 | 3300025728 | Bacteria | 115631 |
| 25 | Ga0207713_1008877 | 3300025735 | Bacteria | 5724 |
| 26 | Ga0207681_11267958 | 3300025923 | Unclassified | 619 |
| 27 | Ga0207694_10198836 | 3300025924 | Bacteria | 1630 |
| 28 | Ga0207667_10473518 | 3300025949 | Unclassified | 1272 |
| 29 | Ga0207640_10016368 | 3300025981 | Bacteria | 4313 |
| 30 | Ga0207678_10658623 | 3300026067 | Bacteria | 920 |
| 31 | Ga0207648_10204430 | 3300026089 | Bacteria | 1752 |
| 32 | Ga0268265_10289904 | 3300028380 | Unclassified | 1469 |
| 33 | Ga0265326_10029220 | 3300028558 | Bacteria | 1570 |
| 34 | Ga0265319_1036908 | 3300028563 | Bacteria | 1668 |
| 35 | Ga0265334_10000739 | 3300028573 | Bacteria | 16363 |
| 36 | Ga0307517_10001029 | 3300028786 | Bacteria | 47353 |
| 37 | Ga0265338_10038228 | 3300028800 | Bacteria | 4551 |
| 38 | Ga0265338_10535318 | 3300028800 | Unclassified | 821 |
| 39 | Ga0265324_10089034 | 3300029957 | Bacteria | 1050 |
| 40 | Ga0265330_10023154 | 3300031235 | Bacteria | 2822 |
| 41 | Ga0265328_10192695 | 3300031239 | Bacteria | 773 |
| 42 | Ga0265320_10007147 | 3300031240 | Bacteria | 6960 |
| 43 | Ga0265325_10013214 | 3300031241 | Unclassified | 4705 |
| 44 | Ga0265331_10009289 | 3300031250 | Bacteria | 5532 |
| 45 | Ga0265331_10018041 | 3300031250 | Unclassified | 3668 |
| 46 | Ga0265331_10163860 | 3300031250 | Unclassified | 1007 |
| 47 | Ga0265327_10008867 | 3300031251 | Bacteria | 7394 |
| 48 | Ga0265316_10020322 | 3300031344 | Bacteria | 5656 |
| 49 | Ga0307513_10750061 | 3300031456 | Bacteria | 682 |
| 50 | Ga0307509_10001212 | 3300031507 | Bacteria | 43898 |
| 51 | Ga0307408_100005150 | 3300031548 | Bacteria | 8765 |
| 52 | Ga0307408_100223033 | 3300031548 | Bacteria | 1539 |
| 53 | Ga0265313_10049895 | 3300031595 | Bacteria | 2011 |
| 54 | Ga0265314_10110523 | 3300031711 | Bacteria | 1747 |
| 55 | Ga0265342_10024805 | 3300031712 | Plasmid | 3781 |
| 56 | Ga0307405_10168880 | 3300031731 | Bacteria | 1558 |
| 57 | Ga0307413_11658089 | 3300031824 | Unclassified | 569 |
| 58 | Ga0307412_10060851 | 3300031911 | Bacteria | 2536 |
| 59 | Ga0307416_100123274 | 3300032002 | Bacteria | 2316 |
| 60 | Ga0373926_0287271 | 3300035083 | Bacteria | 641 |
| 61 | Ga0373943_0381020 | 3300035170 | Unclassified | 812 |
| 62 | Ga0373946_0724341 | 3300035171 | Bacteria | 521 |
| 63 | Ga0373924_0179826 | 3300035410 | Bacteria | 931 |
| 64 | Ga0373931_0504710 | 3300035691 | Bacteria | 781 |
| 65 | Ga0373935_0041833 | 3300035692 | Bacteria | 2880 |
| 66 | Ga0373927_0048054 | 3300035695 | Bacteria | 2760 |
| 67 | Ga0373927_0468154 | 3300035695 | Bacteria | 833 |
| 68 | Ga0373933_0045997 | 3300035724 | Bacteria | 2590 |
| 69 | Ga0373947_0084626 | 3300035725 | Bacteria | 1968 |
| 70 | Ga0373937_0021301 | 3300036401 | Bacteria | 5818 |
| 71 | Ga0373925_0053846 | 3300037068 | Bacteria | 3009 |
| 72 | Ga0395900_0039957 | 3300037418 | Bacteria | 4835 |
| 73 | Ga0395905_0232277 | 3300037471 | Bacteria | 1725 |
| 74 | Ga0395905_0923053 | 3300037471 | Bacteria | 776 |
| 75 | Ga0395901_1360068 | 3300038443 | Bacteria | 670 |
| 76 | Ga0436365_0074482 | 3300039437 | Unclassified | 532 |
| 77 | Ga0436361_0887500 | 3300039447 | Bacteria | 2003 |
| 78 | Ga0436361_1152366 | 3300039447 | Bacteria | 848 |
| 79 | Ga0436363_1471468 | 3300039450 | Bacteria | 1796 |
| 80 | Ga0439436_0116422 | 3300041404 | Bacteria | 747 |
| 81 | Ga0451577_0000099 | 3300042876 | Bacteria | 191842 |
| 82 | Ga0451577_0000104 | 3300042876 | Bacteria | 186417 |
| 83 | Ga0451577_1425050 | 3300042876 | Bacteria | 614 |
| 84 | Ga0466969_0029226 | 3300044656 | Bacteria | 2815 |
| 85 | Ga0453683_0068497 | 3300044673 | Bacteria | 2219 |
| 86 | Ga0453683_0176989 | 3300044673 | Bacteria | 1352 |
| 87 | Ga0453683_0543198 | 3300044673 | Bacteria | 756 |
| 88 | Ga0466965_0088466 | 3300044683 | Unclassified | 1573 |
| 89 | Ga0466966_0231947 | 3300044684 | Unclassified | 1113 |
| 90 | Ga0466961_0001134 | 3300044693 | Bacteria | 16341 |
| 91 | Ga0466961_0124965 | 3300044693 | Unclassified | 1614 |
| 92 | Ga0466961_0228361 | 3300044693 | Bacteria | 1146 |
| 93 | Ga0466963_0769356 | 3300044694 | Unclassified | 679 |
| 94 | Ga0453684_0000063 | 3300044712 | Bacteria | 486079 |
| 95 | Ga0453684_0000350 | 3300044712 | Bacteria | 191841 |
| 96 | Ga0453684_0000364 | 3300044712 | Bacteria | 186418 |
| 97 | Ga0453684_0596538 | 3300044712 | Bacteria | 1211 |
| 98 | Ga0466959_0103574 | 3300045049 | Bacteria | 2036 |
| 99 | Ga0451576_0250743 | 3300045051 | Bacteria | 1850 |
| 100 | Ga0466958_0044350 | 3300045836 | Bacteria | 2680 |
| 101 | Ga0466967_0073498 | 3300045976 | Bacteria | 3068 |
| 102 | Ga0466967_0464446 | 3300045976 | Bacteria | 1238 |
| 103 | Ga0495584_0409264 | 3300046491 | Bacteria | 689 |
| 104 | Ga0495643_0001142 | 3300046522 | Bacteria | 26045 |
| 105 | Ga0495648_0121559 | 3300046524 | Bacteria | 1403 |
| 106 | Ga0495658_0043133 | 3300046683 | Bacteria | 2521 |
| 107 | Ga0495683_0000043 | 3300047323 | Bacteria | 136876 |
| 108 | Ga0496102_0859546 | 3300048905 | Bacteria | 829 |
| 109 | Ga0496110_0080542 | 3300048913 | Bacteria | 2902 |
| 110 | Ga0496114_0062755 | 3300048917 | Bacteria | 3110 |
| 111 | Ga0496114_0199327 | 3300048917 | Bacteria | 1753 |
| 112 | Ga0496122_0069953 | 3300048925 | Bacteria | 2510 |
| 113 | Ga0496122_0541412 | 3300048925 | Bacteria | 557 |
| 114 | Ga0496123_0005312 | 3300048926 | Bacteria | 13037 |
| 115 | Ga0496124_0002630 | 3300048927 | Bacteria | 23089 |
| 116 | Ga0496125_0081519 | 3300048928 | Bacteria | 2471 |
| 117 | Ga0496126_0004377 | 3300048929 | Bacteria | 16933 |
| 118 | Ga0495682_0001211 | 3300049460 | Bacteria | 14675 |
| 119 | Ga0501031_0431787 | 3300049568 | Unclassified | 851 |
| 120 | Ga0501032_0045581 | 3300049569 | Bacteria | 2965 |
| 121 | Ga0501032_0047475 | 3300049569 | Bacteria | 2899 |
| 122 | Ga0501032_0518628 | 3300049569 | Unclassified | 761 |
| 123 | Ga0501033_0896902 | 3300049570 | Unclassified | 596 |
| 124 | Ga0501034_0003714 | 3300049571 | Bacteria | 17237 |
| 125 | Ga0501034_0135544 | 3300049571 | Bacteria | 2443 |
| 126 | Ga0501036_1543167 | 3300049572 | Bacteria | 537 |
| 127 | Ga0501037_0070755 | 3300049573 | Bacteria | 2538 |
| 128 | Ga0501037_0304295 | 3300049573 | Bacteria | 1106 |
| 129 | Ga0501037_0539831 | 3300049573 | Unclassified | 788 |
| 130 | Ga0501038_0250023 | 3300049574 | Bacteria | 1405 |
| 131 | Ga0501039_0083465 | 3300049575 | Bacteria | 2488 |
| 132 | Ga0501043_0328333 | 3300049579 | Bacteria | 1165 |
| 133 | Ga0501043_0413654 | 3300049579 | Bacteria | 1017 |
| 134 | Ga0501046_0072429 | 3300049580 | Bacteria | 2675 |
| 135 | Ga0501046_0209337 | 3300049580 | Bacteria | 1448 |
| 136 | Ga0501047_0001415 | 3300049581 | Bacteria | 23547 |
| 137 | Ga0501047_0856962 | 3300049581 | Unclassified | 722 |
| 138 | Ga0501047_1284184 | 3300049581 | Bacteria | 546 |
| 139 | Ga0501067_0000574 | 3300049583 | Bacteria | 19877 |
| 140 | Ga0501069_0152534 | 3300049585 | Bacteria | 1328 |
| 141 | Ga0501070_0001764 | 3300049586 | Bacteria | 19132 |
| 142 | Ga0501070_0326108 | 3300049586 | Unclassified | 1248 |
| 143 | Ga0501072_0014830 | 3300049588 | Bacteria | 5975 |
| 144 | Ga0501073_0004972 | 3300049589 | Bacteria | 9978 |
| 145 | Ga0501073_0144957 | 3300049589 | Bacteria | 1646 |
| 146 | Ga0501073_0366668 | 3300049589 | Unclassified | 995 |
| 147 | Ga0501257_217753 | 3300049686 | Unclassified | 555 |
| 148 | Ga0501079_0060350 | 3300049741 | Bacteria | 2925 |
| 149 | Ga0501079_0509555 | 3300049741 | Unclassified | 946 |
| 150 | Ga0501080_0059482 | 3300049742 | Bacteria | 3555 |
| 151 | Ga0501080_0278523 | 3300049742 | Bacteria | 1521 |
| 152 | Ga0501083_0003275 | 3300049744 | Bacteria | 11310 |
| 153 | Ga0501035_0943509 | 3300049822 | Unclassified | 681 |
| 154 | Ga0501035_1481002 | 3300049822 | Bacteria | 518 |
| 155 | Ga0501044_0499134 | 3300049823 | Bacteria | 1118 |
| 156 | nmdc:mga00v17_42754_c1 | 3300050491 | Bacteria | 2726 |
| 157 | nmdc:mga0yw44_469722_c1 | 3300050492 | Bacteria | 853 |
| 158 | nmdc:mga06r32_1730044_c1 | 3300050510 | Bacteria | 562 |
| 159 | nmdc:mga06r32_2079187_c1 | 3300050510 | Unclassified | 501 |
| 160 | Ga0500647_0357879 | 3300053091 | Bacteria | 605 |
| 161 | Ga0500641_0149588 | 3300053096 | Bacteria | 1008 |
| 162 | Ga0500618_072404 | 3300053125 | Bacteria | 773 |
| 163 | Ga0501084_0751680 | 3300054114 | Unclassified | 822 |
| 164 | Ga0501082_0043792 | 3300060353 | Bacteria | 3861 |
| 165 | Ga0466962_0266180 | 3300061719 | Bacteria | 844 |
| 166 | Ga0466962_0292385 | 3300061719 | Unclassified | 805 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300044694 | Ga0466963_0769356 | Ga0466963_0769356_423_665 | 78 |
| 2 | 3300009093 | Ga0105240_10198482 | Ga0105240_101984823 | 86 |
| 3 | 3300048929 | Ga0496126_0004377 | Ga0496126_0004377_3961_4269 | 86 |
| 4 | iso_pu_bacteria | 2919404418 | 2919407722 | 88 |
| 5 | 3300045976 | Ga0466967_0464446 | Ga0466967_0464446_299_622 | 89 |
| 6 | iso_pu_bacteria | 2593339239 | 2595452920 | 89 |
| 7 | iso_pu_bacteria | 2808606384 | 2808974233 | 90 |
| 8 | iso_pu_bacteria | 2808606390 | 2809009019 | 90 |
| 9 | iso_pu_bacteria | 2808606391 | 2809016170 | 90 |
| 10 | iso_pu_bacteria | 8020953355 | 8020958983 | 90 |
| 11 | iso_pu_bacteria | 8039098773 | 8039103992 | 90 |
| 12 | iso_pu_bacteria | 2574179768 | 2574429675 | 91 |
| 13 | 3300039437 | Ga0436365_0074482 | Ga0436365_0074482_143_421 | 92 |
| 14 | 3300044712 | Ga0453684_0596538 | Ga0453684_0596538_569_847 | 92 |
| 15 | 3300049568 | Ga0501031_0431787 | Ga0501031_0431787_418_696 | 92 |
| 16 | 3300049569 | Ga0501032_0047475 | Ga0501032_0047475_2411_2689 | 92 |
| 17 | 3300049573 | Ga0501037_0070755 | Ga0501037_0070755_2105_2383 | 92 |
| 18 | 3300049575 | Ga0501039_0083465 | Ga0501039_0083465_938_1216 | 92 |
| 19 | 3300049585 | Ga0501069_0152534 | Ga0501069_0152534_595_873 | 92 |
| 20 | 3300049586 | Ga0501070_0326108 | Ga0501070_0326108_658_936 | 92 |
| 21 | 3300049589 | Ga0501073_0366668 | Ga0501073_0366668_421_699 | 92 |
| 22 | 3300049741 | Ga0501079_0060350 | Ga0501079_0060350_2494_2772 | 92 |
| 23 | 3300049742 | Ga0501080_0278523 | Ga0501080_0278523_1091_1369 | 92 |
| 24 | 3300049460 | Ga0495682_0001211 | Ga0495682_0001211_580_861 | 93 |
| 25 | iso_pu_bacteria | 2599185306 | 2599965269 | 93 |
| 26 | iso_pu_bacteria | 2599185313 | 2600006916 | 93 |
| 27 | iso_pu_bacteria | 2599185324 | 2600070364 | 93 |
| 28 | iso_pu_bacteria | 2842324504 | 2842332527 | 93 |
| 29 | iso_pu_bacteria | 2842348783 | 2842356930 | 93 |
| 30 | iso_pu_bacteria | 2842454564 | 2842461394 | 93 |
| 31 | 3300005337 | Ga0070682_100222790 | Ga0070682_1002227901 | 94 |
| 32 | 3300005353 | Ga0070669_101348760 | Ga0070669_1013487602 | 94 |
| 33 | 3300005356 | Ga0070674_101149246 | Ga0070674_1011492462 | 94 |
| 34 | 3300005455 | Ga0070663_100540275 | Ga0070663_1005402752 | 94 |
| 35 | 3300005459 | Ga0068867_100170256 | Ga0068867_1001702564 | 94 |
| 36 | 3300005563 | Ga0068855_102554639 | Ga0068855_1025546392 | 94 |
| 37 | 3300005578 | Ga0068854_100044627 | Ga0068854_1000446272 | 94 |
| 38 | 3300006051 | Ga0075364_10440012 | Ga0075364_104400122 | 94 |
| 39 | 3300006846 | Ga0075430_100053003 | Ga0075430_1000530035 | 94 |
| 40 | 3300013104 | Ga0157370_10043415 | Ga0157370_100434155 | 94 |
| 41 | 3300013307 | Ga0157372_11078695 | Ga0157372_110786952 | 94 |
| 42 | 3300014497 | Ga0182008_10088367 | Ga0182008_100883672 | 94 |
| 43 | 3300025302 | Ga0207426_1040025 | Ga0207426_10400252 | 94 |
| 44 | 3300025923 | Ga0207681_11267958 | Ga0207681_112679581 | 94 |
| 45 | 3300025924 | Ga0207694_10198836 | Ga0207694_101988362 | 94 |
| 46 | 3300025949 | Ga0207667_10473518 | Ga0207667_104735183 | 94 |
| 47 | 3300025981 | Ga0207640_10016368 | Ga0207640_100163683 | 94 |
| 48 | 3300026067 | Ga0207678_10658623 | Ga0207678_106586232 | 94 |
| 49 | 3300026089 | Ga0207648_10204430 | Ga0207648_102044304 | 94 |
| 50 | 3300028380 | Ga0268265_10289904 | Ga0268265_102899043 | 94 |
| 51 | 3300028558 | Ga0265326_10029220 | Ga0265326_100292203 | 94 |
| 52 | 3300028563 | Ga0265319_1036908 | Ga0265319_10369083 | 94 |
| 53 | 3300028573 | Ga0265334_10000739 | Ga0265334_1000073915 | 94 |
| 54 | 3300031235 | Ga0265330_10023154 | Ga0265330_100231544 | 94 |
| 55 | 3300031239 | Ga0265328_10192695 | Ga0265328_101926952 | 94 |
| 56 | 3300031240 | Ga0265320_10007147 | Ga0265320_100071475 | 94 |
| 57 | 3300031241 | Ga0265325_10013214 | Ga0265325_100132145 | 94 |
| 58 | 3300031250 | Ga0265331_10009289 | Ga0265331_100092893 | 94 |
| 59 | 3300031344 | Ga0265316_10020322 | Ga0265316_100203226 | 94 |
| 60 | 3300031595 | Ga0265313_10049895 | Ga0265313_100498955 | 94 |
| 61 | 3300031712 | Ga0265342_10024805 | Ga0265342_100248055 | 94 |
| 62 | 3300031824 | Ga0307413_11658089 | Ga0307413_116580892 | 94 |
| 63 | 3300035083 | Ga0373926_0287271 | Ga0373926_0287271_281_568 | 94 |
| 64 | 3300035170 | Ga0373943_0381020 | Ga0373943_0381020_123_410 | 94 |
| 65 | 3300035171 | Ga0373946_0724341 | Ga0373946_0724341_59_346 | 94 |
| 66 | 3300035410 | Ga0373924_0179826 | Ga0373924_0179826_442_729 | 94 |
| 67 | 3300035692 | Ga0373935_0041833 | Ga0373935_0041833_2443_2730 | 94 |
| 68 | 3300035695 | Ga0373927_0048054 | Ga0373927_0048054_1021_1308 | 94 |
| 69 | 3300035724 | Ga0373933_0045997 | Ga0373933_0045997_2000_2287 | 94 |
| 70 | 3300035725 | Ga0373947_0084626 | Ga0373947_0084626_1350_1637 | 94 |
| 71 | 3300036401 | Ga0373937_0021301 | Ga0373937_0021301_3691_3978 | 94 |
| 72 | 3300037068 | Ga0373925_0053846 | Ga0373925_0053846_1744_2031 | 94 |
| 73 | 3300042876 | Ga0451577_1425050 | Ga0451577_1425050_215_499 | 94 |
| 74 | 3300044673 | Ga0453683_0068497 | Ga0453683_0068497_1498_1782 | 94 |
| 75 | 3300044673 | Ga0453683_0176989 | Ga0453683_0176989_184_468 | 94 |
| 76 | 3300044693 | Ga0466961_0001134 | Ga0466961_0001134_6119_6412 | 94 |
| 77 | 3300044712 | Ga0453684_0000063 | Ga0453684_0000063_27670_27960 | 94 |
| 78 | 3300045049 | Ga0466959_0103574 | Ga0466959_0103574_1633_1926 | 94 |
| 79 | 3300045051 | Ga0451576_0250743 | Ga0451576_0250743_216_500 | 94 |
| 80 | 3300045836 | Ga0466958_0044350 | Ga0466958_0044350_887_1180 | 94 |
| 81 | 3300045976 | Ga0466967_0073498 | Ga0466967_0073498_1657_1941 | 94 |
| 82 | 3300046683 | Ga0495658_0043133 | Ga0495658_0043133_2129_2416 | 94 |
| 83 | 3300048925 | Ga0496122_0541412 | Ga0496122_0541412_113_397 | 94 |
| 84 | 3300049569 | Ga0501032_0045581 | Ga0501032_0045581_189_473 | 94 |
| 85 | 3300049569 | Ga0501032_0518628 | Ga0501032_0518628_254_556 | 94 |
| 86 | 3300049570 | Ga0501033_0896902 | Ga0501033_0896902_104_388 | 94 |
| 87 | 3300049571 | Ga0501034_0003714 | Ga0501034_0003714_9693_9995 | 94 |
| 88 | 3300049571 | Ga0501034_0135544 | Ga0501034_0135544_718_1002 | 94 |
| 89 | 3300049572 | Ga0501036_1543167 | Ga0501036_1543167_75_362 | 94 |
| 90 | 3300049573 | Ga0501037_0304295 | Ga0501037_0304295_46_330 | 94 |
| 91 | 3300049573 | Ga0501037_0539831 | Ga0501037_0539831_160_462 | 94 |
| 92 | 3300049574 | Ga0501038_0250023 | Ga0501038_0250023_866_1150 | 94 |
| 93 | 3300049579 | Ga0501043_0328333 | Ga0501043_0328333_154_456 | 94 |
| 94 | 3300049579 | Ga0501043_0413654 | Ga0501043_0413654_267_554 | 94 |
| 95 | 3300049580 | Ga0501046_0072429 | Ga0501046_0072429_1323_1607 | 94 |
| 96 | 3300049580 | Ga0501046_0209337 | Ga0501046_0209337_960_1262 | 94 |
| 97 | 3300049581 | Ga0501047_0001415 | Ga0501047_0001415_16016_16318 | 94 |
| 98 | 3300049581 | Ga0501047_0856962 | Ga0501047_0856962_408_692 | 94 |
| 99 | 3300049581 | Ga0501047_1284184 | Ga0501047_1284184_215_502 | 94 |
| 100 | 3300049583 | Ga0501067_0000574 | Ga0501067_0000574_12340_12642 | 94 |
| 101 | 3300049586 | Ga0501070_0001764 | Ga0501070_0001764_11232_11534 | 94 |
| 102 | 3300049588 | Ga0501072_0014830 | Ga0501072_0014830_5663_5965 | 94 |
| 103 | 3300049589 | Ga0501073_0004972 | Ga0501073_0004972_2626_2928 | 94 |
| 104 | 3300049589 | Ga0501073_0144957 | Ga0501073_0144957_85_372 | 94 |
| 105 | 3300049741 | Ga0501079_0509555 | Ga0501079_0509555_540_842 | 94 |
| 106 | 3300049742 | Ga0501080_0059482 | Ga0501080_0059482_2407_2709 | 94 |
| 107 | 3300049744 | Ga0501083_0003275 | Ga0501083_0003275_10277_10579 | 94 |
| 108 | 3300049822 | Ga0501035_0943509 | Ga0501035_0943509_228_512 | 94 |
| 109 | 3300049822 | Ga0501035_1481002 | Ga0501035_1481002_128_415 | 94 |
| 110 | 3300049823 | Ga0501044_0499134 | Ga0501044_0499134_764_1066 | 94 |
| 111 | 3300050491 | nmdc:mga00v17_42754_c1 | nmdc:mga00v17_42754_c1_231_515 | 94 |
| 112 | 3300050492 | nmdc:mga0yw44_469722_c1 | nmdc:mga0yw44_469722_c1_119_403 | 94 |
| 113 | 3300050510 | nmdc:mga06r32_1730044_c1 | nmdc:mga06r32_1730044_c1_141_440 | 94 |
| 114 | 3300050510 | nmdc:mga06r32_2079187_c1 | nmdc:mga06r32_2079187_c1_127_435 | 94 |
| 115 | 3300054114 | Ga0501084_0751680 | Ga0501084_0751680_298_600 | 94 |
| 116 | 3300060353 | Ga0501082_0043792 | Ga0501082_0043792_1050_1352 | 94 |
| 117 | 3300061719 | Ga0466962_0266180 | Ga0466962_0266180_214_507 | 94 |
| 118 | iso_pu_bacteria | 2852657418 | 2852663282 | 94 |
| 119 | iso_pu_bacteria | 2895395659 | 2895395888 | 94 |
| 120 | 3300006847 | Ga0075431_100163005 | Ga0075431_1001630052 | 95 |
| 121 | 3300009093 | Ga0105240_11473896 | Ga0105240_114738962 | 95 |
| 122 | 3300021361 | Ga0213872_10051676 | Ga0213872_100516763 | 95 |
| 123 | 3300028800 | Ga0265338_10535318 | Ga0265338_105353181 | 95 |
| 124 | 3300029957 | Ga0265324_10089034 | Ga0265324_100890343 | 95 |
| 125 | 3300031250 | Ga0265331_10018041 | Ga0265331_100180417 | 95 |
| 126 | 3300031456 | Ga0307513_10750061 | Ga0307513_107500612 | 95 |
| 127 | 3300031507 | Ga0307509_10001212 | Ga0307509_1000121243 | 95 |
| 128 | 3300035691 | Ga0373931_0504710 | Ga0373931_0504710_439_726 | 95 |
| 129 | 3300035695 | Ga0373927_0468154 | Ga0373927_0468154_417_719 | 95 |
| 130 | 3300039447 | Ga0436361_0887500 | Ga0436361_0887500_1166_1453 | 95 |
| 131 | 3300041404 | Ga0439436_0116422 | Ga0439436_0116422_186_476 | 95 |
| 132 | 3300042876 | Ga0451577_0000104 | Ga0451577_0000104_89736_90023 | 95 |
| 133 | 3300044673 | Ga0453683_0543198 | Ga0453683_0543198_454_741 | 95 |
| 134 | 3300044712 | Ga0453684_0000364 | Ga0453684_0000364_96396_96683 | 95 |
| 135 | 3300005456 | Ga0070678_100453524 | Ga0070678_1004535242 | 96 |
| 136 | 3300005459 | Ga0068867_102262021 | Ga0068867_1022620212 | 96 |
| 137 | 3300011119 | Ga0105246_10959891 | Ga0105246_109598912 | 96 |
| 138 | 3300031250 | Ga0265331_10163860 | Ga0265331_101638603 | 96 |
| 139 | 3300031251 | Ga0265327_10008867 | Ga0265327_100088673 | 96 |
| 140 | 3300031548 | Ga0307408_100005150 | Ga0307408_1000051509 | 96 |
| 141 | 3300031548 | Ga0307408_100223033 | Ga0307408_1002230332 | 96 |
| 142 | 3300031911 | Ga0307412_10060851 | Ga0307412_100608511 | 96 |
| 143 | 3300032002 | Ga0307416_100123274 | Ga0307416_1001232743 | 96 |
| 144 | 3300037418 | Ga0395900_0039957 | Ga0395900_0039957_3468_3788 | 96 |
| 145 | 3300037471 | Ga0395905_0923053 | Ga0395905_0923053_368_688 | 96 |
| 146 | 3300038443 | Ga0395901_1360068 | Ga0395901_1360068_64_384 | 96 |
| 147 | 3300039447 | Ga0436361_1152366 | Ga0436361_1152366_26_316 | 96 |
| 148 | 3300039450 | Ga0436363_1471468 | Ga0436363_1471468_1361_1660 | 96 |
| 149 | 3300042876 | Ga0451577_0000099 | Ga0451577_0000099_178065_178361 | 96 |
| 150 | 3300044712 | Ga0453684_0000350 | Ga0453684_0000350_13482_13778 | 96 |
| 151 | 3300048905 | Ga0496102_0859546 | Ga0496102_0859546_329_628 | 96 |
| 152 | 3300048913 | Ga0496110_0080542 | Ga0496110_0080542_2475_2774 | 96 |
| 153 | 3300048917 | Ga0496114_0199327 | Ga0496114_0199327_1114_1413 | 96 |
| 154 | 3300005289 | Ga0065704_10080820 | Ga0065704_100808203 | 97 |
| 155 | 3300009092 | Ga0105250_10016006 | Ga0105250_100160063 | 97 |
| 156 | 3300025711 | Ga0207696_1008213 | Ga0207696_10082132 | 97 |
| 157 | 3300025728 | Ga0207655_1000175 | Ga0207655_100017547 | 97 |
| 158 | 3300025735 | Ga0207713_1008877 | Ga0207713_10088776 | 97 |
| 159 | 3300028786 | Ga0307517_10001029 | Ga0307517_1000102928 | 97 |
| 160 | 3300028800 | Ga0265338_10038228 | Ga0265338_100382281 | 97 |
| 161 | 3300031711 | Ga0265314_10110523 | Ga0265314_101105233 | 97 |
| 162 | 3300031731 | Ga0307405_10168880 | Ga0307405_101688802 | 97 |
| 163 | 3300037471 | Ga0395905_0232277 | Ga0395905_0232277_331_672 | 97 |
| 164 | 3300044656 | Ga0466969_0029226 | Ga0466969_0029226_484_786 | 97 |
| 165 | 3300044683 | Ga0466965_0088466 | Ga0466965_0088466_819_1115 | 97 |
| 166 | 3300044684 | Ga0466966_0231947 | Ga0466966_0231947_514_816 | 97 |
| 167 | 3300044693 | Ga0466961_0124965 | Ga0466961_0124965_622_924 | 97 |
| 168 | 3300044693 | Ga0466961_0228361 | Ga0466961_0228361_458_754 | 97 |
| 169 | 3300046491 | Ga0495584_0409264 | Ga0495584_0409264_101_394 | 97 |
| 170 | 3300046522 | Ga0495643_0001142 | Ga0495643_0001142_6632_6928 | 97 |
| 171 | 3300046524 | Ga0495648_0121559 | Ga0495648_0121559_845_1138 | 97 |
| 172 | 3300047323 | Ga0495683_0000043 | Ga0495683_0000043_115449_115742 | 97 |
| 173 | 3300048917 | Ga0496114_0062755 | Ga0496114_0062755_949_1245 | 97 |
| 174 | 3300048925 | Ga0496122_0069953 | Ga0496122_0069953_786_1082 | 97 |
| 175 | 3300048926 | Ga0496123_0005312 | Ga0496123_0005312_11313_11609 | 97 |
| 176 | 3300048927 | Ga0496124_0002630 | Ga0496124_0002630_17356_17661 | 97 |
| 177 | 3300048928 | Ga0496125_0081519 | Ga0496125_0081519_1760_2056 | 97 |
| 178 | 3300049686 | Ga0501257_217753 | Ga0501257_217753_108_407 | 97 |
| 179 | 3300053091 | Ga0500647_0357879 | Ga0500647_0357879_200_493 | 97 |
| 180 | 3300053096 | Ga0500641_0149588 | Ga0500641_0149588_123_521 | 97 |
| 181 | 3300053125 | Ga0500618_072404 | Ga0500618_072404_381_680 | 97 |
| 182 | 3300061719 | Ga0466962_0292385 | Ga0466962_0292385_167_463 | 97 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 6h4c-assembly1.cif.gz_D | a polyamorous repressor: deciphering the evolutionary strategy used by the phage-inducible chromosomal islands to spread in nature. | 0.8132 | 34 | 88 |
| 5woq-assembly2.cif.gz_C | crystal structure of an xre family protein transcriptional regulator from mycobacterium smegmatis | 0.8018 | 40 | 88 |
| 2b5a-assembly1.cif.gz_A | c.bcli, control element of the bcli restriction-modification system | 0.8017 | 37 | 88 |
| 1adr-assembly1.cif.gz_A | determination of the nuclear magnetic resonance structure of the dna-binding domain of the p22 c2 repressor (1-76) in solution and comparison with the dna-binding domain of the 434 repressor | 0.7996 | 37 | 88 |
| 1y7y-assembly1.cif.gz_B | high-resolution crystal structure of the restriction-modification controller protein c.ahdi from aeromonas hydrophila | 0.7986 | 40 | 88 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 2b5aC00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.8062 | 37 | 88 | 1.10.260.40 |
| 2b5aB00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.8059 | 37 | 88 | 1.10.260.40 |
| 2b5aA00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.8017 | 37 | 88 | 1.10.260.40 |
| 1adrA00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.7996 | 37 | 88 | 1.10.260.40 |
| 1y7yB00 | Mainly Alpha;Orthogonal Bundle;434 Repressor (Amino-terminal Domain);lambda repressor-like DNA-binding domains | 0.7986 | 40 | 88 | 1.10.260.40 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A139BPI2-F1-model_v4 | Transcriptional regulator | 0.9873 | 25 | 94 |
GO:0003677
|
| AF-A0A5C8CFP1-F1-model_v4 | Putative addiction module antidote protein | 0.9849 | 5 | 93 |
GO:0003677
|
| AF-A0A1I3ICE9-F1-model_v4 | Probable addiction module antidote protein | 0.983 | 1 | 96 |
GO:0003677
|
| AF-A0A7X7QR23-F1-model_v4 | Putative addiction module antidote protein | 0.9802 | 1 | 93 |
GO:0003677
|
| AF-A0A537M837-F1-model_v4 | Putative addiction module antidote protein | 0.9798 | 13 | 96 |
GO:0003677
|
Predicted Structure (AlphaFold2)
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