F277291

General Info

Members Datasets Scaffolds Average Seq Length
181 151 362 129

Family's Representative Sequence

Representative Sequence 3300009147|Ga0114129_10773826|Ga0114129_107738262
Length 135
Sequence MNQPSGITPQTDSYPYDTHLNIHFEPLEVVDIQPLVDRATHPWFNQTLCKVNDSVVRLGVVKGEYHWHKHDTEDEFFYVVEGCLLIDLDGEEGRRIELEPRQGFVVPKGVIHRTRARERTIILMVEGAGIIPTGD

Samples

Sample ID Description Type Environment
1 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
14 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
18 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
32 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
35 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
38 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
42 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
43 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
44 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
45 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
46 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
47 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
48 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
49 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
50 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
53 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
54 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
55 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
60 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
61 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
62 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
94 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
95 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
96 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
97 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
98 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
99 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
100 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
101 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
102 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
103 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
104 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
105 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
106 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
109 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
110 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
111 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
112 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
113 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
114 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
115 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
116 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
117 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
118 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
119 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
120 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
121 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
122 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
123 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
124 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
125 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
126 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
129 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
130 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
131 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
132 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
133 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
137 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
138 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
139 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
140 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
141 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
142 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
143 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
144 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
145 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
148 2515154189 Paraburkholderia nodosa DSM 21604 Isolate Unclassified
149 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
150 2902682994 Paraburkholderia atlantica CNPSo 3155 Isolate Unclassified
151 8054280661 Metabacillus kandeliae GX 13764 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.13
Metatranscriptomes 1.1
Isolates 2.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.55
Nodule 0.55
Rhizoplane 2.21
Rhizosphere 90.61
Stem 0
Stem Tuber 0
Unclassified 25.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0114129_10773826 3300009147 Unclassified 1227
2 Ga0065704_10523053 3300005289 Bacteria 652
3 Ga0070676_10249413 3300005328 Unclassified 1184
4 Ga0070683_100773517 3300005329 Bacteria 920
5 Ga0068868_100015740 3300005338 Bacteria 5601
6 Ga0070660_100382755 3300005339 Bacteria 1161
7 Ga0070661_100364211 3300005344 Unclassified 1137
8 Ga0070668_100085155 3300005347 Bacteria 2484
9 Ga0070667_100300425 3300005367 Bacteria 1445
10 Ga0070709_10047852 3300005434 Bacteria 2665
11 Ga0070709_10236158 3300005434 Bacteria 1310
12 Ga0070714_100716952 3300005435 Unclassified 966
13 Ga0070713_100032420 3300005436 Bacteria 4173
14 Ga0070713_102346631 3300005436 Bacteria 516
15 Ga0070710_10505181 3300005437 Bacteria 828
16 Ga0070710_10676675 3300005437 Unclassified 726
17 Ga0070711_100731844 3300005439 Unclassified 835
18 Ga0070708_100258890 3300005445 Bacteria 1635
19 Ga0070662_100010729 3300005457 Bacteria 6032
20 Ga0070706_100252617 3300005467 Unclassified 1646
21 Ga0070707_100965844 3300005468 Bacteria 817
22 Ga0070684_101144382 3300005535 Unclassified 732
23 Ga0070697_100303063 3300005536 Bacteria 1374
24 Ga0068853_100053988 3300005539 Bacteria 3462
25 Ga0070672_100027637 3300005543 Bacteria 4234
26 Ga0070695_100247302 3300005545 Bacteria 1296
27 Ga0070665_100000121 3300005548 Bacteria 147683
28 Ga0070704_100185322 3300005549 Unclassified 1668
29 Ga0068864_100435997 3300005618 Unclassified 1251
30 Ga0068863_100019580 3300005841 Bacteria 6472
31 Ga0068858_100061949 3300005842 Unclassified 3459
32 Ga0068860_100399245 3300005843 Unclassified 1360
33 Ga0070717_10035381 3300006028 Bacteria 4042
34 Ga0070717_10149901 3300006028 Bacteria 2017
35 Ga0097621_100423521 3300006237 Bacteria 1195
36 Ga0068871_100063574 3300006358 Bacteria 3019
37 Ga0075430_100877898 3300006846 Bacteria 739
38 Ga0075433_10179900 3300006852 Unclassified 1881
39 Ga0075434_100020100 3300006871 Bacteria 6470
40 Ga0068865_100040497 3300006881 Unclassified 3166
41 Ga0075435_100211911 3300007076 Bacteria 1644
42 Ga0099795_10289195 3300007788 Unclassified 718
43 Ga0105240_10191821 3300009093 Bacteria 2402
44 Ga0111539_10924230 3300009094 Bacteria 1015
45 Ga0105245_10000031 3300009098 Bacteria 151832
46 Ga0114129_10001854 3300009147 Bacteria 28811
47 Ga0105241_11199949 3300009174 Bacteria 719
48 Ga0105248_10001413 3300009177 Bacteria 26833
49 Ga0105248_10066792 3300009177 Bacteria 4038
50 Ga0105237_10019065 3300009545 Bacteria 7091
51 Ga0105238_10041041 3300009551 Bacteria 4687
52 Ga0105249_12031407 3300009553 Unclassified 647
53 Ga0105239_10003099 3300010375 Bacteria 20619
54 Ga0105239_10263598 3300010375 Bacteria 1937
55 Ga0105239_10385488 3300010375 Bacteria 1585
56 Ga0105246_10196456 3300011119 Bacteria 1565
57 Ga0157373_10308950 3300013100 Bacteria 1123
58 Ga0157369_10987268 3300013105 Unclassified 862
59 Ga0163162_10086334 3300013306 Bacteria 3216
60 Ga0157372_10164171 3300013307 Bacteria 2568
61 Ga0157375_10261334 3300013308 Bacteria 1893
62 Ga0157375_10669144 3300013308 Unclassified 1193
63 Ga0163163_10407004 3300014325 Bacteria 1419
64 Ga0157377_11313548 3300014745 Bacteria 566
65 Ga0157379_10104574 3300014968 Bacteria 2541
66 Ga0157376_10513173 3300014969 Bacteria 1180
67 Ga0163161_10050032 3300017792 Bacteria 3023
68 Ga0213872_10000270 3300021361 Bacteria 44678
69 Ga0213872_10004624 3300021361 Bacteria 7252
70 Ga0213876_10000946 3300021384 Bacteria 19108
71 Ga0213871_10034264 3300021441 Bacteria 1338
72 Ga0207697_10036166 3300025315 Bacteria 2022
73 Ga0207692_10628053 3300025898 Bacteria 693
74 Ga0207692_10734446 3300025898 Bacteria 643
75 Ga0207647_10258709 3300025904 Bacteria 997
76 Ga0207699_10019948 3300025906 Bacteria 3584
77 Ga0207699_10183126 3300025906 Bacteria 1409
78 Ga0207645_10040932 3300025907 Bacteria 2967
79 Ga0207654_10075340 3300025911 Bacteria 2016
80 Ga0207695_10000074 3300025913 Bacteria 311994
81 Ga0207695_10173085 3300025913 Bacteria 2083
82 Ga0207671_10062908 3300025914 Bacteria 2757
83 Ga0207663_10121959 3300025916 Bacteria 1786
84 Ga0207660_11154033 3300025917 Bacteria 631
85 Ga0207657_10024065 3300025919 Bacteria 5654
86 Ga0207694_10271514 3300025924 Bacteria 1391
87 Ga0207700_10447467 3300025928 Unclassified 1138
88 Ga0207664_10064027 3300025929 Bacteria 2939
89 Ga0207706_10002070 3300025933 Bacteria 19666
90 Ga0207704_10553363 3300025938 Unclassified 935
91 Ga0207691_10024596 3300025940 Bacteria 5664
92 Ga0207711_10000482 3300025941 Bacteria 41192
93 Ga0207711_10041424 3300025941 Unclassified 3922
94 Ga0207711_10079115 3300025941 Bacteria 2869
95 Ga0207661_10188961 3300025944 Bacteria 1805
96 Ga0207712_11588657 3300025961 Unclassified 586
97 Ga0207668_10035935 3300025972 Bacteria 3305
98 Ga0207640_10687706 3300025981 Unclassified 875
99 Ga0207658_10013447 3300025986 Bacteria 5590
100 Ga0207677_10068773 3300026023 Bacteria 2487
101 Ga0207639_11279927 3300026041 Bacteria 688
102 Ga0207641_10122707 3300026088 Bacteria 2321
103 Ga0207641_10633428 3300026088 Unclassified 1049
104 Ga0207648_10517262 3300026089 Unclassified 1093
105 Ga0207676_10531072 3300026095 Unclassified 1121
106 Ga0209588_1001832 3300027671 Bacteria 5662
107 Ga0268266_10000106 3300028379 Bacteria 175109
108 Ga0268266_10122662 3300028379 Bacteria 2314
109 Ga0268264_10194852 3300028381 Bacteria 1849
110 Ga0265338_10100300 3300028800 Bacteria 2362
111 Ga0265760_10000029 3300031090 Bacteria 54904
112 Ga0265760_10251753 3300031090 Unclassified 612
113 Ga0373945_0452404 3300035116 Unclassified 568
114 Ga0373953_0194636 3300035117 Bacteria 876
115 Ga0373955_0305186 3300035172 Bacteria 960
116 Ga0373933_0109893 3300035724 Bacteria 1719
117 Ga0373937_0024576 3300036401 Bacteria 5436
118 Ga0373937_0031824 3300036401 Bacteria 4782
119 Ga0373937_0083507 3300036401 Bacteria 2955
120 Ga0373937_0406794 3300036401 Unclassified 1291
121 Ga0436364_0059479 3300037853 Bacteria 5780
122 Ga0436364_0503899 3300037853 Bacteria 1425
123 Ga0436364_1048147 3300037853 Bacteria 1718
124 Ga0400491_06876 3300038727 Unclassified 3522
125 Ga0400488_30031 3300038741 Unclassified 1061
126 Ga0436365_1489260 3300039437 Bacteria 25872
127 Ga0436360_0331812 3300039438 Unclassified 811
128 Ga0436360_0503652 3300039438 Unclassified 515
129 Ga0436360_0667250 3300039438 Bacteria 1397
130 Ga0436361_0355901 3300039447 Bacteria 23775
131 Ga0436361_0761235 3300039447 Bacteria 90297
132 Ga0436363_1333293 3300039450 Bacteria 4538
133 Ga0451577_1166570 3300042876 Bacteria 688
134 Ga0453683_0019937 3300044673 Unclassified 4288
135 Ga0453684_0976896 3300044712 Unclassified 902
136 Ga0466968_0739236 3300044735 Bacteria 504
137 Ga0451576_0027291 3300045051 Bacteria 6134
138 Ga0451576_0772834 3300045051 Bacteria 1009
139 Ga0466967_0989828 3300045976 Bacteria 837
140 Ga0466967_1063544 3300045976 Unclassified 806
141 Ga0495629_0034500 3300046459 Unclassified 3577
142 Ga0495651_0272557 3300046462 Bacteria 1147
143 Ga0495651_0639452 3300046462 Bacteria 668
144 Ga0495580_0071041 3300046472 Bacteria 2432
145 Ga0495639_0161346 3300046475 Bacteria 1085
146 Ga0495608_0480912 3300046511 Bacteria 753
147 Ga0495586_0013031 3300046535 Bacteria 4406
148 Ga0495645_0098879 3300046543 Bacteria 2076
149 Ga0495667_0254311 3300046559 Bacteria 1118
150 Ga0495657_0625752 3300046675 Bacteria 622
151 Ga0495623_0336680 3300046679 Bacteria 825
152 Ga0495646_0338844 3300046680 Bacteria 789
153 Ga0495658_1121907 3300046683 Unclassified 501
154 Ga0495613_0458567 3300046689 Bacteria 863
155 Ga0495600_0103541 3300046809 Unclassified 1855
156 Ga0495674_0556921 3300047319 Bacteria 912
157 Ga0495680_0541124 3300047322 Bacteria 786
158 Ga0495593_0065985 3300047673 Bacteria 1887
159 Ga0496101_1150799 3300048904 Unclassified 609
160 Ga0496113_0290412 3300048916 Unclassified 1308
161 Ga0496114_0837738 3300048917 Unclassified 799
162 Ga0496115_0203720 3300048918 Bacteria 1634
163 Ga0501072_0882426 3300049588 Unclassified 699
164 Ga0501073_0499951 3300049589 Bacteria 841
165 Ga0501076_0217769 3300049592 Bacteria 1561
166 Ga0501076_0481425 3300049592 Bacteria 1023
167 Ga0501077_0795555 3300049593 Unclassified 608
168 Ga0501079_0317153 3300049741 Bacteria 1220
169 nmdc:mga05p37_196067_c1 3300050507 Bacteria 2449
170 nmdc:mga09592_194515_c1 3300050508 Unclassified 1755
171 nmdc:mga08y16_915534_c1 3300050511 Bacteria 862
172 nmdc:mga0n895_44596_c1 3300050512 Unclassified 4324
173 nmdc:mga0rr50_230238_c1 3300050513 Bacteria 1533
174 Ga0495601_0171158 3300053077 Bacteria 1419
175 Ga0500595_027657 3300053119 Bacteria 1940
176 Ga0501084_0183067 3300054114 Bacteria 1769
177 2515679770 2515154122 Bacteria 8609520
178 2516022583 2515154189 Bacteria 9629850
179 2883089770 2883087390 Bacteria 9532701
180 2902690186 2902682994 Bacteria 8951596
181 8054284491 8054280661 Bacteria 4232245
182 Ga0114129_10773826
183 Ga0065704_10523053
184 Ga0070676_10249413
185 Ga0070683_100773517
186 Ga0068868_100015740
187 Ga0070660_100382755
188 Ga0070661_100364211
189 Ga0070668_100085155
190 Ga0070667_100300425
191 Ga0070709_10047852
192 Ga0070709_10236158
193 Ga0070714_100716952
194 Ga0070713_100032420
195 Ga0070713_102346631
196 Ga0070710_10505181
197 Ga0070710_10676675
198 Ga0070711_100731844
199 Ga0070708_100258890
200 Ga0070662_100010729
201 Ga0070706_100252617
202 Ga0070707_100965844
203 Ga0070684_101144382
204 Ga0070697_100303063
205 Ga0068853_100053988
206 Ga0070672_100027637
207 Ga0070695_100247302
208 Ga0070665_100000121
209 Ga0070704_100185322
210 Ga0068864_100435997
211 Ga0068863_100019580
212 Ga0068858_100061949
213 Ga0068860_100399245
214 Ga0070717_10035381
215 Ga0070717_10149901
216 Ga0097621_100423521
217 Ga0068871_100063574
218 Ga0075430_100877898
219 Ga0075433_10179900
220 Ga0075434_100020100
221 Ga0068865_100040497
222 Ga0075435_100211911
223 Ga0099795_10289195
224 Ga0105240_10191821
225 Ga0111539_10924230
226 Ga0105245_10000031
227 Ga0114129_10001854
228 Ga0105241_11199949
229 Ga0105248_10001413
230 Ga0105248_10066792
231 Ga0105237_10019065
232 Ga0105238_10041041
233 Ga0105249_12031407
234 Ga0105239_10003099
235 Ga0105239_10263598
236 Ga0105239_10385488
237 Ga0105246_10196456
238 Ga0157373_10308950
239 Ga0157369_10987268
240 Ga0163162_10086334
241 Ga0157372_10164171
242 Ga0157375_10261334
243 Ga0157375_10669144
244 Ga0163163_10407004
245 Ga0157377_11313548
246 Ga0157379_10104574
247 Ga0157376_10513173
248 Ga0163161_10050032
249 Ga0213872_10000270
250 Ga0213872_10004624
251 Ga0213876_10000946
252 Ga0213871_10034264
253 Ga0207697_10036166
254 Ga0207692_10628053
255 Ga0207692_10734446
256 Ga0207647_10258709
257 Ga0207699_10019948
258 Ga0207699_10183126
259 Ga0207645_10040932
260 Ga0207654_10075340
261 Ga0207695_10000074
262 Ga0207695_10173085
263 Ga0207671_10062908
264 Ga0207663_10121959
265 Ga0207660_11154033
266 Ga0207657_10024065
267 Ga0207694_10271514
268 Ga0207700_10447467
269 Ga0207664_10064027
270 Ga0207706_10002070
271 Ga0207704_10553363
272 Ga0207691_10024596
273 Ga0207711_10000482
274 Ga0207711_10041424
275 Ga0207711_10079115
276 Ga0207661_10188961
277 Ga0207712_11588657
278 Ga0207668_10035935
279 Ga0207640_10687706
280 Ga0207658_10013447
281 Ga0207677_10068773
282 Ga0207639_11279927
283 Ga0207641_10122707
284 Ga0207641_10633428
285 Ga0207648_10517262
286 Ga0207676_10531072
287 Ga0209588_1001832
288 Ga0268266_10000106
289 Ga0268266_10122662
290 Ga0268264_10194852
291 Ga0265338_10100300
292 Ga0265760_10000029
293 Ga0265760_10251753
294 Ga0373945_0452404
295 Ga0373953_0194636
296 Ga0373955_0305186
297 Ga0373933_0109893
298 Ga0373937_0024576
299 Ga0373937_0031824
300 Ga0373937_0083507
301 Ga0373937_0406794
302 Ga0436364_0059479
303 Ga0436364_0503899
304 Ga0436364_1048147
305 Ga0400491_06876
306 Ga0400488_30031
307 Ga0436365_1489260
308 Ga0436360_0331812
309 Ga0436360_0503652
310 Ga0436360_0667250
311 Ga0436361_0355901
312 Ga0436361_0761235
313 Ga0436363_1333293
314 Ga0451577_1166570
315 Ga0453683_0019937
316 Ga0453684_0976896
317 Ga0466968_0739236
318 Ga0451576_0027291
319 Ga0451576_0772834
320 Ga0466967_0989828
321 Ga0466967_1063544
322 Ga0495629_0034500
323 Ga0495651_0272557
324 Ga0495651_0639452
325 Ga0495580_0071041
326 Ga0495639_0161346
327 Ga0495608_0480912
328 Ga0495586_0013031
329 Ga0495645_0098879
330 Ga0495667_0254311
331 Ga0495657_0625752
332 Ga0495623_0336680
333 Ga0495646_0338844
334 Ga0495658_1121907
335 Ga0495613_0458567
336 Ga0495600_0103541
337 Ga0495674_0556921
338 Ga0495680_0541124
339 Ga0495593_0065985
340 Ga0496101_1150799
341 Ga0496113_0290412
342 Ga0496114_0837738
343 Ga0496115_0203720
344 Ga0501072_0882426
345 Ga0501073_0499951
346 Ga0501076_0217769
347 Ga0501076_0481425
348 Ga0501077_0795555
349 Ga0501079_0317153
350 nmdc:mga05p37_196067_c1
351 nmdc:mga09592_194515_c1
352 nmdc:mga08y16_915534_c1
353 nmdc:mga0n895_44596_c1
354 nmdc:mga0rr50_230238_c1
355 Ga0495601_0171158
356 Ga0500595_027657
357 Ga0501084_0183067
358 2515679770
359 2516022583
360 2883089770
361 2902690186
362 8054284491

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07883

Cupin_2

Cupin domain

55

126

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3d82-assembly1.cif.gz_E crystal structure of a cupin-2 domain containing protein (sfri_3543) from shewanella frigidimarina ncimb 400 at 2.05 a resolution 0.9565 21 115
5efu-assembly1.cif.gz_A resting state of rat cysteine dioxygenase h155q variant 0.9131 44 118
5fpx-assembly1.cif.gz_A the structure of kdgf from yersinia enterocolitica. 0.9124 36 115
1vrb-assembly2.cif.gz_C crystal structure of putative asparaginyl hydroxylase (2636534) from bacillus subtilis at 2.60 a resolution 0.9085 45 114
5fpz-assembly1.cif.gz_A-2 the structure of kdgf from yersinia enterocolitica with malonate bound in the active site. 0.9071 36 115
ID Description Score Start End Superfamily
af_Q2G1P7_1_117_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9201 60 115 2.60.120.10
af_P76555_101_233_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9148 44 116 2.60.120.10
3d82C00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9132 19 112 2.60.120.10
5fpxA00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9124 36 115 2.60.120.10
af_P96245_1_96_2.60.120.10 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.9097 49 112 2.60.120.10
ID Description Score Start End GO Terms
AF-A0A2B3L6T5-F1-model_v4 deleted 0.993 41 115
AF-A0A2V7G5G5-F1-model_v4 Cupin domain-containing protein 0.9865 6 123
AF-A0A7Z7CCP4-F1-model_v4 Cupin domain-containing protein 0.984 42 117
AF-A0A256Z3T5-F1-model_v4 Cupin 0.9813 17 123
AF-A0A117SJV9-F1-model_v4 Cupin 0.9804 6 123

Map