F276362
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 180 | 135 | 153 | 505 |
Family's Representative Sequence
| Representative Sequence | 3300049772|Ga0501275_000077|Ga0501275_000077_3291_4892 |
| Length | 533 |
| Sequence | VPRVPRGWITIERDAIPASALEAIFVSNPLYDRLFAPLAGRPGACLHLEGDAALSGPGFLAIVHRSAAALRALGVRPGDRVALQVAKTPEALAIYGATVAAGAVLLPLNTAYTPAEVDAFVADATPRVLLVDPAKSDALSPVAARHGATLATLDAGGRGSFRDLCDAQSSDAVVQPRAEGDLAALLYTSGTTGRSKGAMLSQGNLLSNAATLADVWRFGPGDVLLHALPIFHTHGLFVACNVSLLSGAAMIFQPGFDLDAILRALPRATVLMGVPTFYTRLLGDASADGSRFDRDLVAHMRLFVSGSAPLLAETHVAFEARTGHRILERYGMTETNMNTSNPYDGERRAGTVGKPLPGVEVVVADTATRVPQPAGETGMVEVRGPNVFGGYWNLPEKTREDLRDDGFFITGDLGRFDDDGYLALVGRQKDLVITGGFNVYPKEVESVLDEQPGVLESAVIGVPHPDFGEAVFAVLVARPGERIDVDAIDAVLRECLARYKQPKGIAVIDALPRNAMGKVQKALLRERFGGRFG |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2643221564 | Mesorhizobium sp. Root157 | Isolate | Unclassified |
| 2 | 2852680915 | Sphingopyxis sp. JAI128 | Isolate | Rhizosphere |
| 3 | 2871495908 | Mesorhizobium sp. M1C.F.Ca.ET.193.01.1.1 | Isolate | Nodule |
| 4 | 2876392853 | Mesorhizobium sp. M1D.F.Ca.ET.234.01.1.1 | Isolate | Nodule |
| 5 | 2878760144 | Mesorhizobium sp. M1C.F.Ca.ET.192.01.1.1 | Isolate | Nodule |
| 6 | 2878767105 | Mesorhizobium sp. M1C.F.Ca.ET.144.01.1.1 | Isolate | Nodule |
| 7 | 2881161766 | Mesorhizobium sp. M1D.F.Ca.ET.043.01.1.1 | Isolate | Nodule |
| 8 | 2903540706 | Mesorhizobium sp. M1C.F.Ca.ET.212.01.1.1 | Isolate | Nodule |
| 9 | 2904659560 | Mesorhizobium sp. M1D.F.Ca.ET.184.01.1.1 | Isolate | Nodule |
| 10 | 2906328253 | Mesorhizobium sp. M1A.T.Ca.IN.004.03.1.1 | Isolate | Nodule |
| 11 | 2924762789 | Mesorhizobium sp. WSM4303 | Isolate | Unclassified |
| 12 | 2937891427 | Mesorhizobium sp. M1A.F.Ca.IN.022.07.1.1 | Isolate | Nodule |
| 13 | 2937994558 | Mesorhizobium sp. M1C.F.Ca.ET.187.01.1.1 | Isolate | Nodule |
| 14 | 2958165035 | Mesorhizobium sp. M1C.F.Ca.ET.196.01.1.1 | Isolate | Nodule |
| 15 | 2961114664 | Mesorhizobium sp. M1D.F.Ca.ET.231.01.1.1 | Isolate | Nodule |
| 16 | 2961163497 | Mesorhizobium sp. M1C.F.Ca.ET.176.01.1.1 | Isolate | Nodule |
| 17 | 2965018300 | Mesorhizobium sp. M1C.F.Ca.ET.188.01.1.1 | Isolate | Nodule |
| 18 | 2968110612 | Mesorhizobium sp. M1D.F.Ca.ET.183.01.1.1 | Isolate | Nodule |
| 19 | 2968171901 | Mesorhizobium sp. M1C.F.Ca.ET.189.01.1.1 | Isolate | Nodule |
| 20 | 2970554993 | Mesorhizobium sp. M1C.F.Ca.ET.210.01.1.1 | Isolate | Nodule |
| 21 | 2977898635 | Mesorhizobium sp. M7A.T.Ca.TU.009.01.3.1 | Isolate | Nodule |
| 22 | 2987659509 | Mesorhizobium sp. M1C.F.Ca.ET.204.01.1.1 | Isolate | Nodule |
| 23 | 3004188549 | Mesorhizobium sp. M1C.F.Ca.ET.195.01.1.1 | Isolate | Nodule |
| 24 | 3004334049 | Mesorhizobium huakuii 583 | Isolate | Unclassified |
| 25 | 3300003187 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB | Metagenome | Endosphere |
| 26 | 3300003762 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 | Metagenome | Endosphere |
| 27 | 3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Metagenome | Rhizosphere |
| 28 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 29 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 30 | 3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Metagenome | Rhizosphere |
| 31 | 3300005355 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG | Metagenome | Rhizosphere |
| 32 | 3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Metagenome | Rhizosphere |
| 33 | 3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Metagenome | Rhizosphere |
| 34 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 35 | 3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Metagenome | Rhizosphere |
| 36 | 3300005616 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 | Metagenome | Rhizosphere |
| 37 | 3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Metagenome | Rhizosphere |
| 38 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 39 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 40 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 41 | 3300006042 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 | Metagenome | Endosphere |
| 42 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 43 | 3300006177 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 | Metagenome | Endosphere |
| 44 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 45 | 3300006195 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 | Metagenome | Endosphere |
| 46 | 3300006931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300021361 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 | Metagenome | Rhizosphere |
| 53 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 54 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 55 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300025931 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300027866 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) | Metagenome | Endosphere |
| 69 | 3300028800 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG | Metagenome | Rhizosphere |
| 70 | 3300031251 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG | Metagenome | Rhizosphere |
| 71 | 3300031344 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG | Metagenome | Rhizosphere |
| 72 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 73 | 3300035398 | Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 | Metagenome | Rhizosphere |
| 74 | 3300037418 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 | Metagenome | Rhizosphere |
| 75 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 76 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 77 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 78 | 3300039447 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 | Metagenome | Rhizosphere |
| 79 | 3300041404 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 | Metagenome | Rhizosphere |
| 80 | 3300042122 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 | Metagenome | Rhizosphere |
| 81 | 3300042435 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 | Metagenome | Rhizosphere |
| 82 | 3300042876 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED | Metagenome | Rhizosphere |
| 83 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 84 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 85 | 3300046539 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere | Metagenome | Rhizosphere |
| 86 | 3300046660 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere | Metagenome | Rhizosphere |
| 87 | 3300047443 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere | Metagenome | Rhizosphere |
| 88 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 89 | 3300048906 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 | Metagenome | Rhizoplane |
| 90 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 91 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 92 | 3300048909 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 | Metagenome | Rhizoplane |
| 93 | 3300048910 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 | Metagenome | Rhizoplane |
| 94 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 95 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 96 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 97 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 98 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 99 | 3300048921 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 | Metagenome | Unclassified |
| 100 | 3300048922 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 | Metagenome | Unclassified |
| 101 | 3300048923 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 | Metagenome | Unclassified |
| 102 | 3300048925 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled | Metagenome | Unclassified |
| 103 | 3300048926 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled | Metagenome | Unclassified |
| 104 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 105 | 3300049570 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 106 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 107 | 3300049573 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 108 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 109 | 3300049579 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 110 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 112 | 3300049586 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 | Metagenome | Rhizosphere |
| 113 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 114 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 115 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049744 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049772 | Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E11_B_4_control | Metagenome | Rhizosphere |
| 119 | 3300049822 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300049823 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 121 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 122 | 3300050490 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation | Metagenome | Endosphere |
| 123 | 3300050491 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation | Metagenome | Endosphere |
| 124 | 3300050493 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation | Metagenome | Endosphere |
| 125 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 126 | 3300050495 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation | Metagenome | Endosphere |
| 127 | 3300050496 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation | Metagenome | Endosphere |
| 128 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 129 | 3300053104 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere | Metagenome | Endosphere |
| 130 | 3300053108 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere | Metagenome | Endosphere |
| 131 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 132 | 3300053121 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere | Metagenome | Endosphere |
| 133 | 3300053730 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere | Metagenome | Endosphere |
| 134 | 8001845381 | Ancylobacter sonchi VKM B-3145 | Isolate | Unclassified |
| 135 | 8004312739 | Mesorhizobium sp. M7A.F.Ca.MR.362.00.0.0 | Isolate | Nodule |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 85 |
| Metatranscriptomes | 0 |
| Isolates | 15 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 17.78 |
| Nodule | 12.22 |
| Rhizoplane | 7.78 |
| Rhizosphere | 56.67 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 5.56 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | JGI25151J46595_10000307 | 3300003187 | Bacteria | 53542 |
| 2 | Ga0055542_1000618 | 3300003762 | Bacteria | 30135 |
| 3 | Ga0070666_10013785 | 3300005335 | Bacteria | 5135 |
| 4 | Ga0070668_100000920 | 3300005347 | Bacteria | 20505 |
| 5 | Ga0070669_100000270 | 3300005353 | Bacteria | 42327 |
| 6 | Ga0070669_100007821 | 3300005353 | Bacteria | 7637 |
| 7 | Ga0070675_100009737 | 3300005354 | Bacteria | 7489 |
| 8 | Ga0070671_100000116 | 3300005355 | Bacteria | 51559 |
| 9 | Ga0070671_100000363 | 3300005355 | Bacteria | 31295 |
| 10 | Ga0070671_100009109 | 3300005355 | Bacteria | 7971 |
| 11 | Ga0070674_100091599 | 3300005356 | Bacteria | 2196 |
| 12 | Ga0070667_100001907 | 3300005367 | Bacteria | 18505 |
| 13 | Ga0070667_100009807 | 3300005367 | Bacteria | 7938 |
| 14 | Ga0070685_10010019 | 3300005466 | Bacteria | 4915 |
| 15 | Ga0070672_100016852 | 3300005543 | Bacteria | 5242 |
| 16 | Ga0068852_100027323 | 3300005616 | Bacteria | 4650 |
| 17 | Ga0068859_100000675 | 3300005617 | Bacteria | 34217 |
| 18 | Ga0068863_100001087 | 3300005841 | Bacteria | 27174 |
| 19 | Ga0068858_100012819 | 3300005842 | Bacteria | 7904 |
| 20 | Ga0068862_100016564 | 3300005844 | Bacteria | 6138 |
| 21 | Ga0075368_10000606 | 3300006042 | Bacteria | 10828 |
| 22 | Ga0075364_10000557 | 3300006051 | Bacteria | 19122 |
| 23 | Ga0075364_10007252 | 3300006051 | Bacteria | 6573 |
| 24 | Ga0075362_10000211 | 3300006177 | Bacteria | 16265 |
| 25 | Ga0075367_10007586 | 3300006178 | Bacteria | 5567 |
| 26 | Ga0075367_10074070 | 3300006178 | Bacteria | 2053 |
| 27 | Ga0075366_10017195 | 3300006195 | Bacteria | 4160 |
| 28 | Ga0075366_10028440 | 3300006195 | Bacteria | 3281 |
| 29 | Ga0097620_100000675 | 3300006931 | Bacteria | 34217 |
| 30 | Ga0105248_10001928 | 3300009177 | Bacteria | 23040 |
| 31 | Ga0105248_10069230 | 3300009177 | Bacteria | 3962 |
| 32 | Ga0105249_10055111 | 3300009553 | Bacteria | 3636 |
| 33 | Ga0105249_10177365 | 3300009553 | Bacteria | 2070 |
| 34 | Ga0105239_10045235 | 3300010375 | Bacteria | 4824 |
| 35 | Ga0163163_10003102 | 3300014325 | Bacteria | 14079 |
| 36 | Ga0163163_10008700 | 3300014325 | Bacteria | 9028 |
| 37 | Ga0157379_10000171 | 3300014968 | Bacteria | 48687 |
| 38 | Ga0213872_10000031 | 3300021361 | Bacteria | 139321 |
| 39 | Ga0213872_10000107 | 3300021361 | Bacteria | 77234 |
| 40 | Ga0213872_10006798 | 3300021361 | Bacteria | 5694 |
| 41 | Ga0209758_1001436 | 3300025297 | Bacteria | 28156 |
| 42 | Ga0209050_1011156 | 3300025298 | Bacteria | 4303 |
| 43 | Ga0207680_10110903 | 3300025903 | Bacteria | 1779 |
| 44 | Ga0207681_10000531 | 3300025923 | Bacteria | 26310 |
| 45 | Ga0207644_10000191 | 3300025931 | Bacteria | 43874 |
| 46 | Ga0207644_10005791 | 3300025931 | Bacteria | 8043 |
| 47 | Ga0207644_10014543 | 3300025931 | Bacteria | 5266 |
| 48 | Ga0207669_10071440 | 3300025937 | Bacteria | 2181 |
| 49 | Ga0207691_10005211 | 3300025940 | Bacteria | 12552 |
| 50 | Ga0207691_10106863 | 3300025940 | Bacteria | 2492 |
| 51 | Ga0207711_10001364 | 3300025941 | Bacteria | 23045 |
| 52 | Ga0207668_10000339 | 3300025972 | Bacteria | 30296 |
| 53 | Ga0207658_10000344 | 3300025986 | Bacteria | 46055 |
| 54 | Ga0207639_10183673 | 3300026041 | Bacteria | 1781 |
| 55 | Ga0207641_10007203 | 3300026088 | Bacteria | 9272 |
| 56 | Ga0207674_10014227 | 3300026116 | Bacteria | 8792 |
| 57 | Ga0207675_100100510 | 3300026118 | Bacteria | 2725 |
| 58 | Ga0207683_10029794 | 3300026121 | Bacteria | 4726 |
| 59 | Ga0209813_10000550 | 3300027866 | Bacteria | 8855 |
| 60 | Ga0265338_10065363 | 3300028800 | Bacteria | 3156 |
| 61 | Ga0265327_10004146 | 3300031251 | Bacteria | 13077 |
| 62 | Ga0265316_10026328 | 3300031344 | Bacteria | 4839 |
| 63 | Ga0373943_0050692 | 3300035170 | Bacteria | 2041 |
| 64 | Ga0316574_0000278 | 3300035398 | Bacteria | 19095 |
| 65 | Ga0395900_0307007 | 3300037418 | Bacteria | 1571 |
| 66 | Ga0395905_0056433 | 3300037471 | Bacteria | 3674 |
| 67 | Ga0395905_0114658 | 3300037471 | Bacteria | 2532 |
| 68 | Ga0395905_0217597 | 3300037471 | Bacteria | 1788 |
| 69 | Ga0395901_0123459 | 3300038443 | Bacteria | 2721 |
| 70 | Ga0436365_0408484 | 3300039437 | Bacteria | 6181 |
| 71 | Ga0436361_0140034 | 3300039447 | Bacteria | 6089 |
| 72 | Ga0436361_0913791 | 3300039447 | Bacteria | 99691 |
| 73 | Ga0436361_0968908 | 3300039447 | Bacteria | 25233 |
| 74 | Ga0439436_0001299 | 3300041404 | Bacteria | 7149 |
| 75 | Ga0450920_000481 | 3300042122 | Bacteria | 6282 |
| 76 | Ga0439434_0012811 | 3300042435 | Bacteria | 2485 |
| 77 | Ga0451577_0023207 | 3300042876 | Bacteria | 5660 |
| 78 | Ga0453684_0000006 | 3300044712 | Bacteria | 1364191 |
| 79 | Ga0466967_0031965 | 3300045976 | Bacteria | 4439 |
| 80 | Ga0495621_0005989 | 3300046539 | Bacteria | 3527 |
| 81 | Ga0495625_0060030 | 3300046660 | Bacteria | 2695 |
| 82 | Ga0495687_042219 | 3300047443 | Bacteria | 1995 |
| 83 | Ga0496102_0055665 | 3300048905 | Bacteria | 3607 |
| 84 | Ga0496102_0129011 | 3300048905 | Bacteria | 2365 |
| 85 | Ga0496103_0115005 | 3300048906 | Bacteria | 1711 |
| 86 | Ga0496104_0026113 | 3300048907 | Bacteria | 5388 |
| 87 | Ga0496105_0006864 | 3300048908 | Bacteria | 8761 |
| 88 | Ga0496105_0079254 | 3300048908 | Bacteria | 2712 |
| 89 | Ga0496106_0003329 | 3300048909 | Bacteria | 11976 |
| 90 | Ga0496107_0000159 | 3300048910 | Bacteria | 34333 |
| 91 | Ga0496108_0002404 | 3300048911 | Bacteria | 14970 |
| 92 | Ga0496109_0005388 | 3300048912 | Bacteria | 10696 |
| 93 | Ga0496112_0005301 | 3300048915 | Bacteria | 11123 |
| 94 | Ga0496112_0019754 | 3300048915 | Bacteria | 6369 |
| 95 | Ga0496113_0002494 | 3300048916 | Bacteria | 10721 |
| 96 | Ga0496115_0006114 | 3300048918 | Bacteria | 8799 |
| 97 | Ga0496118_0055238 | 3300048921 | Bacteria | 2999 |
| 98 | Ga0496119_0001636 | 3300048922 | Bacteria | 26397 |
| 99 | Ga0496120_0056864 | 3300048923 | Bacteria | 2205 |
| 100 | Ga0496122_0001189 | 3300048925 | Bacteria | 44564 |
| 101 | Ga0496123_0001203 | 3300048926 | Bacteria | 37856 |
| 102 | Ga0501032_0010605 | 3300049569 | Bacteria | 6635 |
| 103 | Ga0501032_0102856 | 3300049569 | Bacteria | 1893 |
| 104 | Ga0501033_0007780 | 3300049570 | Bacteria | 8302 |
| 105 | Ga0501033_0013355 | 3300049570 | Bacteria | 6258 |
| 106 | Ga0501033_0056975 | 3300049570 | Bacteria | 2888 |
| 107 | Ga0501034_0062549 | 3300049571 | Bacteria | 3738 |
| 108 | Ga0501034_0291463 | 3300049571 | Bacteria | 1570 |
| 109 | Ga0501037_0014117 | 3300049573 | Bacteria | 5884 |
| 110 | Ga0501038_0123651 | 3300049574 | Bacteria | 2131 |
| 111 | Ga0501043_0000055 | 3300049579 | Bacteria | 105522 |
| 112 | Ga0501043_0007417 | 3300049579 | Bacteria | 8704 |
| 113 | Ga0501047_0000342 | 3300049581 | Bacteria | 53140 |
| 114 | Ga0501047_0007509 | 3300049581 | Bacteria | 10260 |
| 115 | Ga0501047_0008166 | 3300049581 | Bacteria | 9886 |
| 116 | Ga0501069_0000071 | 3300049585 | Bacteria | 51245 |
| 117 | Ga0501070_0000747 | 3300049586 | Bacteria | 29640 |
| 118 | Ga0501070_0003687 | 3300049586 | Bacteria | 13238 |
| 119 | Ga0501071_0082702 | 3300049587 | Bacteria | 2351 |
| 120 | Ga0501073_0031267 | 3300049589 | Bacteria | 3798 |
| 121 | Ga0501073_0091836 | 3300049589 | Bacteria | 2110 |
| 122 | Ga0501074_0000120 | 3300049590 | Bacteria | 39864 |
| 123 | Ga0501074_0023878 | 3300049590 | Bacteria | 4444 |
| 124 | Ga0501080_0007698 | 3300049742 | Bacteria | 9735 |
| 125 | Ga0501080_0008509 | 3300049742 | Bacteria | 9303 |
| 126 | Ga0501083_0000647 | 3300049744 | Bacteria | 22538 |
| 127 | Ga0501275_000077 | 3300049772 | Bacteria | 9945 |
| 128 | Ga0501035_0000183 | 3300049822 | Bacteria | 76563 |
| 129 | Ga0501035_0002488 | 3300049822 | Bacteria | 18002 |
| 130 | Ga0501035_0003478 | 3300049822 | Bacteria | 15066 |
| 131 | Ga0501044_0000009 | 3300049823 | Bacteria | 270072 |
| 132 | Ga0501044_0000346 | 3300049823 | Bacteria | 58137 |
| 133 | Ga0501044_0004843 | 3300049823 | Bacteria | 15052 |
| 134 | Ga0501044_0183070 | 3300049823 | Bacteria | 2061 |
| 135 | nmdc:mga03683_3660_c1 | 3300050489 | Bacteria | 5000 |
| 136 | nmdc:mga03683_41_c1 | 3300050489 | Bacteria | 60927 |
| 137 | nmdc:mga03n38_833_c1 | 3300050490 | Bacteria | 8249 |
| 138 | nmdc:mga00v17_131915_c1 | 3300050491 | Bacteria | 1597 |
| 139 | nmdc:mga00v17_1621_c1 | 3300050491 | Bacteria | 11764 |
| 140 | nmdc:mga00v17_5460_c1 | 3300050491 | Bacteria | 6696 |
| 141 | nmdc:mga00v17_8924_c1 | 3300050491 | Bacteria | 5409 |
| 142 | nmdc:mga0k408_2730_c1 | 3300050493 | Bacteria | 9376 |
| 143 | nmdc:mga06z11_597_c1 | 3300050494 | Bacteria | 13187 |
| 144 | nmdc:mga04h51_111_c1 | 3300050495 | Bacteria | 24272 |
| 145 | nmdc:mga07m45_16_c1 | 3300050496 | Bacteria | 151695 |
| 146 | nmdc:mga07m45_32563_c1 | 3300050496 | Bacteria | 2891 |
| 147 | nmdc:mga0sz30_119_c1 | 3300050516 | Bacteria | 29121 |
| 148 | Ga0500556_0000026 | 3300053104 | Bacteria | 166874 |
| 149 | Ga0500556_0000537 | 3300053104 | Bacteria | 25852 |
| 150 | Ga0500562_019285 | 3300053108 | Bacteria | 1764 |
| 151 | Ga0500595_000504 | 3300053119 | Bacteria | 23584 |
| 152 | Ga0500607_028950 | 3300053121 | Bacteria | 3062 |
| 153 | Ga0500645_010863 | 3300053730 | Bacteria | 2994 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300048923 | Ga0496120_0056864 | Ga0496120_0056864_81_1376 | 431 |
| 2 | 3300037418 | Ga0395900_0307007 | Ga0395900_0307007_191_1558 | 448 |
| 3 | 3300005355 | Ga0070671_100000363 | Ga0070671_10000036334 | 458 |
| 4 | 3300025931 | Ga0207644_10005791 | Ga0207644_1000579110 | 458 |
| 5 | 3300042435 | Ga0439434_0012811 | Ga0439434_0012811_92_1477 | 461 |
| 6 | 3300045976 | Ga0466967_0031965 | Ga0466967_0031965_2123_3514 | 461 |
| 7 | 3300031251 | Ga0265327_10004146 | Ga0265327_100041466 | 465 |
| 8 | 3300031344 | Ga0265316_10026328 | Ga0265316_100263285 | 465 |
| 9 | 3300053119 | Ga0500595_000504 | Ga0500595_000504_11498_12964 | 465 |
| 10 | 3300025297 | Ga0209758_1001436 | Ga0209758_100143624 | 469 |
| 11 | 3300050491 | nmdc:mga00v17_131915_c1 | nmdc:mga00v17_131915_c1_14_1429 | 471 |
| 12 | 3300026041 | Ga0207639_10183673 | Ga0207639_101836732 | 472 |
| 13 | 3300053104 | Ga0500556_0000026 | Ga0500556_0000026_111374_112888 | 472 |
| 14 | 3300006195 | Ga0075366_10017195 | Ga0075366_100171952 | 476 |
| 15 | 3300050493 | nmdc:mga0k408_2730_c1 | nmdc:mga0k408_2730_c1_1097_2533 | 476 |
| 16 | 3300044712 | Ga0453684_0000006 | Ga0453684_0000006_863753_865231 | 490 |
| 17 | 3300005347 | Ga0070668_100000920 | Ga0070668_1000009206 | 493 |
| 18 | 3300005353 | Ga0070669_100007821 | Ga0070669_1000078212 | 493 |
| 19 | 3300005355 | Ga0070671_100009109 | Ga0070671_1000091094 | 493 |
| 20 | 3300005367 | Ga0070667_100001907 | Ga0070667_10000190727 | 493 |
| 21 | 3300005367 | Ga0070667_100009807 | Ga0070667_1000098074 | 493 |
| 22 | 3300005617 | Ga0068859_100000675 | Ga0068859_10000067523 | 493 |
| 23 | 3300005841 | Ga0068863_100001087 | Ga0068863_10000108717 | 493 |
| 24 | 3300005842 | Ga0068858_100012819 | Ga0068858_1000128194 | 493 |
| 25 | 3300005844 | Ga0068862_100016564 | Ga0068862_1000165643 | 493 |
| 26 | 3300006042 | Ga0075368_10000606 | Ga0075368_100006063 | 493 |
| 27 | 3300006051 | Ga0075364_10000557 | Ga0075364_1000055715 | 493 |
| 28 | 3300006051 | Ga0075364_10007252 | Ga0075364_100072522 | 493 |
| 29 | 3300006177 | Ga0075362_10000211 | Ga0075362_1000021112 | 493 |
| 30 | 3300006178 | Ga0075367_10007586 | Ga0075367_100075862 | 493 |
| 31 | 3300006178 | Ga0075367_10074070 | Ga0075367_100740701 | 493 |
| 32 | 3300006195 | Ga0075366_10028440 | Ga0075366_100284403 | 493 |
| 33 | 3300006931 | Ga0097620_100000675 | Ga0097620_10000067523 | 493 |
| 34 | 3300009177 | Ga0105248_10001928 | Ga0105248_100019282 | 493 |
| 35 | 3300009553 | Ga0105249_10177365 | Ga0105249_101773652 | 493 |
| 36 | 3300014325 | Ga0163163_10003102 | Ga0163163_100031028 | 493 |
| 37 | 3300014968 | Ga0157379_10000171 | Ga0157379_100001713 | 493 |
| 38 | 3300025931 | Ga0207644_10014543 | Ga0207644_100145433 | 493 |
| 39 | 3300025941 | Ga0207711_10001364 | Ga0207711_100013642 | 493 |
| 40 | 3300025972 | Ga0207668_10000339 | Ga0207668_1000033913 | 493 |
| 41 | 3300025986 | Ga0207658_10000344 | Ga0207658_1000034418 | 493 |
| 42 | 3300026088 | Ga0207641_10007203 | Ga0207641_100072034 | 493 |
| 43 | 3300026118 | Ga0207675_100100510 | Ga0207675_1001005102 | 493 |
| 44 | 3300027866 | Ga0209813_10000550 | Ga0209813_100005502 | 493 |
| 45 | 3300049823 | Ga0501044_0000346 | Ga0501044_0000346_8303_9802 | 493 |
| 46 | 3300050489 | nmdc:mga03683_3660_c1 | nmdc:mga03683_3660_c1_3288_4790 | 493 |
| 47 | 3300050489 | nmdc:mga03683_41_c1 | nmdc:mga03683_41_c1_49534_51021 | 493 |
| 48 | 3300050490 | nmdc:mga03n38_833_c1 | nmdc:mga03n38_833_c1_1413_2900 | 493 |
| 49 | 3300050491 | nmdc:mga00v17_1621_c1 | nmdc:mga00v17_1621_c1_6429_7928 | 493 |
| 50 | 3300050491 | nmdc:mga00v17_5460_c1 | nmdc:mga00v17_5460_c1_1232_2734 | 493 |
| 51 | 3300050491 | nmdc:mga00v17_8924_c1 | nmdc:mga00v17_8924_c1_3442_4929 | 493 |
| 52 | 3300050494 | nmdc:mga06z11_597_c1 | nmdc:mga06z11_597_c1_9938_11425 | 493 |
| 53 | 3300050495 | nmdc:mga04h51_111_c1 | nmdc:mga04h51_111_c1_18616_20103 | 493 |
| 54 | 3300050496 | nmdc:mga07m45_16_c1 | nmdc:mga07m45_16_c1_32302_33789 | 493 |
| 55 | 3300050496 | nmdc:mga07m45_32563_c1 | nmdc:mga07m45_32563_c1_1099_2598 | 493 |
| 56 | 3300050516 | nmdc:mga0sz30_119_c1 | nmdc:mga0sz30_119_c1_21756_23243 | 493 |
| 57 | 3300053121 | Ga0500607_028950 | Ga0500607_028950_541_2028 | 493 |
| 58 | 3300053730 | Ga0500645_010863 | Ga0500645_010863_143_1648 | 493 |
| 59 | 3300048905 | Ga0496102_0055665 | Ga0496102_0055665_1662_3161 | 495 |
| 60 | 3300048906 | Ga0496103_0115005 | Ga0496103_0115005_62_1561 | 495 |
| 61 | 3300048915 | Ga0496112_0019754 | Ga0496112_0019754_1113_2612 | 495 |
| 62 | 3300053108 | Ga0500562_019285 | Ga0500562_019285_112_1605 | 496 |
| 63 | 3300049571 | Ga0501034_0291463 | Ga0501034_0291463_11_1525 | 497 |
| 64 | 3300049579 | Ga0501043_0007417 | Ga0501043_0007417_2780_4294 | 497 |
| 65 | 3300049581 | Ga0501047_0000342 | Ga0501047_0000342_29673_31187 | 497 |
| 66 | iso_pu_bacteria | 2852680915 | 2852683810 | 497 |
| 67 | 3300005335 | Ga0070666_10013785 | Ga0070666_100137854 | 499 |
| 68 | 3300005353 | Ga0070669_100000270 | Ga0070669_10000027026 | 499 |
| 69 | 3300005354 | Ga0070675_100009737 | Ga0070675_1000097371 | 499 |
| 70 | 3300005355 | Ga0070671_100000116 | Ga0070671_10000011640 | 499 |
| 71 | 3300005466 | Ga0070685_10010019 | Ga0070685_100100192 | 499 |
| 72 | 3300009177 | Ga0105248_10069230 | Ga0105248_100692302 | 499 |
| 73 | 3300009553 | Ga0105249_10055111 | Ga0105249_100551113 | 499 |
| 74 | 3300025923 | Ga0207681_10000531 | Ga0207681_1000053122 | 499 |
| 75 | 3300025931 | Ga0207644_10000191 | Ga0207644_100001919 | 499 |
| 76 | 3300025940 | Ga0207691_10005211 | Ga0207691_100052119 | 499 |
| 77 | 3300026121 | Ga0207683_10029794 | Ga0207683_100297943 | 499 |
| 78 | 3300048905 | Ga0496102_0129011 | Ga0496102_0129011_587_2266 | 499 |
| 79 | 3300048908 | Ga0496105_0079254 | Ga0496105_0079254_908_2587 | 499 |
| 80 | 3300048909 | Ga0496106_0003329 | Ga0496106_0003329_414_2045 | 499 |
| 81 | 3300048910 | Ga0496107_0000159 | Ga0496107_0000159_3504_5135 | 499 |
| 82 | 3300048916 | Ga0496113_0002494 | Ga0496113_0002494_8734_10413 | 499 |
| 83 | iso_pu_bacteria | 2643221564 | 2643838562 | 499 |
| 84 | iso_pu_bacteria | 2871495908 | 2871502670 | 499 |
| 85 | iso_pu_bacteria | 2878760144 | 2878766562 | 499 |
| 86 | iso_pu_bacteria | 2878767105 | 2878773758 | 499 |
| 87 | iso_pu_bacteria | 2903540706 | 2903547711 | 499 |
| 88 | iso_pu_bacteria | 2924762789 | 2924762990 | 499 |
| 89 | iso_pu_bacteria | 2937994558 | 2938001587 | 499 |
| 90 | iso_pu_bacteria | 2958165035 | 2958171741 | 499 |
| 91 | iso_pu_bacteria | 2961163497 | 2961170182 | 499 |
| 92 | iso_pu_bacteria | 2965018300 | 2965024933 | 499 |
| 93 | iso_pu_bacteria | 2968171901 | 2968178574 | 499 |
| 94 | iso_pu_bacteria | 2970554993 | 2970561419 | 499 |
| 95 | iso_pu_bacteria | 2987659509 | 2987666423 | 499 |
| 96 | iso_pu_bacteria | 3004188549 | 3004195429 | 499 |
| 97 | iso_pu_bacteria | 3004334049 | 3004337251 | 499 |
| 98 | iso_pu_bacteria | 8001845381 | 8001847931 | 499 |
| 99 | iso_pu_bacteria | 2871495908 | 2871500856 | 500 |
| 100 | iso_pu_bacteria | 2876392853 | 2876397260 | 500 |
| 101 | iso_pu_bacteria | 2881161766 | 2881164758 | 500 |
| 102 | iso_pu_bacteria | 2904659560 | 2904664014 | 500 |
| 103 | iso_pu_bacteria | 2906328253 | 2906334959 | 500 |
| 104 | iso_pu_bacteria | 2937891427 | 2937894852 | 500 |
| 105 | iso_pu_bacteria | 2961114664 | 2961118846 | 500 |
| 106 | iso_pu_bacteria | 2968110612 | 2968115153 | 500 |
| 107 | 3300025298 | Ga0209050_1011156 | Ga0209050_10111562 | 501 |
| 108 | 3300026116 | Ga0207674_10014227 | Ga0207674_100142276 | 501 |
| 109 | 3300028800 | Ga0265338_10065363 | Ga0265338_100653632 | 501 |
| 110 | 3300035398 | Ga0316574_0000278 | Ga0316574_0000278_17530_19056 | 502 |
| 111 | 3300038443 | Ga0395901_0123459 | Ga0395901_0123459_790_2322 | 502 |
| 112 | 3300039437 | Ga0436365_0408484 | Ga0436365_0408484_3389_4900 | 502 |
| 113 | 3300046660 | Ga0495625_0060030 | Ga0495625_0060030_463_1974 | 502 |
| 114 | 3300048922 | Ga0496119_0001636 | Ga0496119_0001636_21860_23374 | 502 |
| 115 | 3300048925 | Ga0496122_0001189 | Ga0496122_0001189_19481_20995 | 502 |
| 116 | 3300048926 | Ga0496123_0001203 | Ga0496123_0001203_18805_20319 | 502 |
| 117 | 3300049569 | Ga0501032_0010605 | Ga0501032_0010605_1619_3130 | 502 |
| 118 | 3300049570 | Ga0501033_0013355 | Ga0501033_0013355_430_1941 | 502 |
| 119 | 3300049573 | Ga0501037_0014117 | Ga0501037_0014117_1024_2535 | 502 |
| 120 | 3300049574 | Ga0501038_0123651 | Ga0501038_0123651_84_1595 | 502 |
| 121 | 3300049579 | Ga0501043_0000055 | Ga0501043_0000055_99152_100663 | 502 |
| 122 | 3300049585 | Ga0501069_0000071 | Ga0501069_0000071_4865_6376 | 502 |
| 123 | 3300049586 | Ga0501070_0003687 | Ga0501070_0003687_5551_7062 | 502 |
| 124 | 3300049589 | Ga0501073_0031267 | Ga0501073_0031267_1102_2613 | 502 |
| 125 | 3300049590 | Ga0501074_0000120 | Ga0501074_0000120_32803_34314 | 502 |
| 126 | 3300049742 | Ga0501080_0007698 | Ga0501080_0007698_4860_6371 | 502 |
| 127 | 3300049744 | Ga0501083_0000647 | Ga0501083_0000647_4966_6477 | 502 |
| 128 | 3300049772 | Ga0501275_000077 | Ga0501275_000077_3291_4892 | 502 |
| 129 | 3300049822 | Ga0501035_0000183 | Ga0501035_0000183_4332_5843 | 502 |
| 130 | 3300049823 | Ga0501044_0000009 | Ga0501044_0000009_263011_264522 | 502 |
| 131 | 3300053104 | Ga0500556_0000537 | Ga0500556_0000537_7104_8618 | 502 |
| 132 | 3300003762 | Ga0055542_1000618 | Ga0055542_100061814 | 503 |
| 133 | 3300005543 | Ga0070672_100016852 | Ga0070672_1000168524 | 503 |
| 134 | 3300005616 | Ga0068852_100027323 | Ga0068852_1000273232 | 503 |
| 135 | 3300010375 | Ga0105239_10045235 | Ga0105239_100452354 | 503 |
| 136 | 3300021361 | Ga0213872_10000031 | Ga0213872_1000003169 | 503 |
| 137 | 3300021361 | Ga0213872_10000107 | Ga0213872_1000010714 | 503 |
| 138 | 3300021361 | Ga0213872_10006798 | Ga0213872_100067984 | 503 |
| 139 | 3300025903 | Ga0207680_10110903 | Ga0207680_101109032 | 503 |
| 140 | 3300025937 | Ga0207669_10071440 | Ga0207669_100714402 | 503 |
| 141 | 3300025940 | Ga0207691_10106863 | Ga0207691_101068632 | 503 |
| 142 | 3300039447 | Ga0436361_0140034 | Ga0436361_0140034_2531_4072 | 503 |
| 143 | 3300039447 | Ga0436361_0913791 | Ga0436361_0913791_35071_36612 | 503 |
| 144 | 3300039447 | Ga0436361_0968908 | Ga0436361_0968908_23658_25223 | 503 |
| 145 | 3300046539 | Ga0495621_0005989 | Ga0495621_0005989_1059_2600 | 503 |
| 146 | 3300047443 | Ga0495687_042219 | Ga0495687_042219_247_1761 | 503 |
| 147 | iso_pu_bacteria | 2977898635 | 2977904093 | 503 |
| 148 | iso_pu_bacteria | 8004312739 | 8004313364 | 503 |
| 149 | 3300003187 | JGI25151J46595_10000307 | JGI25151J46595_1000030717 | 504 |
| 150 | 3300005356 | Ga0070674_100091599 | Ga0070674_1000915992 | 504 |
| 151 | 3300014325 | Ga0163163_10008700 | Ga0163163_100087009 | 504 |
| 152 | 3300035170 | Ga0373943_0050692 | Ga0373943_0050692_422_1948 | 504 |
| 153 | 3300037471 | Ga0395905_0056433 | Ga0395905_0056433_1403_2920 | 504 |
| 154 | 3300037471 | Ga0395905_0114658 | Ga0395905_0114658_568_2130 | 504 |
| 155 | 3300037471 | Ga0395905_0217597 | Ga0395905_0217597_19_1734 | 504 |
| 156 | 3300041404 | Ga0439436_0001299 | Ga0439436_0001299_3492_5006 | 504 |
| 157 | 3300042122 | Ga0450920_000481 | Ga0450920_000481_3282_4796 | 504 |
| 158 | 3300042876 | Ga0451577_0023207 | Ga0451577_0023207_1823_3421 | 504 |
| 159 | 3300048907 | Ga0496104_0026113 | Ga0496104_0026113_381_1907 | 504 |
| 160 | 3300048908 | Ga0496105_0006864 | Ga0496105_0006864_4758_6284 | 504 |
| 161 | 3300048911 | Ga0496108_0002404 | Ga0496108_0002404_9617_11143 | 504 |
| 162 | 3300048912 | Ga0496109_0005388 | Ga0496109_0005388_159_1685 | 504 |
| 163 | 3300048915 | Ga0496112_0005301 | Ga0496112_0005301_7634_9160 | 504 |
| 164 | 3300048918 | Ga0496115_0006114 | Ga0496115_0006114_178_1701 | 504 |
| 165 | 3300048921 | Ga0496118_0055238 | Ga0496118_0055238_763_2340 | 504 |
| 166 | 3300049569 | Ga0501032_0102856 | Ga0501032_0102856_106_1623 | 504 |
| 167 | 3300049570 | Ga0501033_0007780 | Ga0501033_0007780_4563_6092 | 504 |
| 168 | 3300049570 | Ga0501033_0056975 | Ga0501033_0056975_32_1549 | 504 |
| 169 | 3300049571 | Ga0501034_0062549 | Ga0501034_0062549_1935_3464 | 504 |
| 170 | 3300049581 | Ga0501047_0007509 | Ga0501047_0007509_4141_5670 | 504 |
| 171 | 3300049581 | Ga0501047_0008166 | Ga0501047_0008166_4228_5820 | 504 |
| 172 | 3300049586 | Ga0501070_0000747 | Ga0501070_0000747_27869_29461 | 504 |
| 173 | 3300049587 | Ga0501071_0082702 | Ga0501071_0082702_736_2328 | 504 |
| 174 | 3300049589 | Ga0501073_0091836 | Ga0501073_0091836_256_1785 | 504 |
| 175 | 3300049590 | Ga0501074_0023878 | Ga0501074_0023878_2391_3983 | 504 |
| 176 | 3300049742 | Ga0501080_0008509 | Ga0501080_0008509_978_2507 | 504 |
| 177 | 3300049822 | Ga0501035_0002488 | Ga0501035_0002488_11418_12947 | 504 |
| 178 | 3300049822 | Ga0501035_0003478 | Ga0501035_0003478_3399_4991 | 504 |
| 179 | 3300049823 | Ga0501044_0004843 | Ga0501044_0004843_10424_12013 | 504 |
| 180 | 3300049823 | Ga0501044_0183070 | Ga0501044_0183070_287_1804 | 504 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 5x8g-assembly2.cif.gz_D | binary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with its product analogue osb-ncoa at 1.90 angstrom | 0.9249 | 1 | 495 |
| 5x8f-assembly1.cif.gz_A | ternary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with amp and its product analogue osb-ncoa at 1.76 angstrom | 0.9246 | 1 | 493 |
| 6iyk-assembly1.cif.gz_A | the structure of ente with 2-nitrobenzoyl adenylate analog | 0.9233 | 5 | 481 |
| 5bsv-assembly1.cif.gz_A | crystal structure of 4-coumarate:coa ligase complexed with feruloyl adenylate | 0.918 | 3 | 496 |
| 6iyl-assembly2.cif.gz_B | the structure of ente with 3-cyanobenzoyl adenylate analog | 0.9145 | 5 | 495 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 4futA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain | 0.9835 | 5 | 396 | 3.40.50.12780 |
| af_P31552_422_517_3.30.300.30 | Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain | 0.9833 | 399 | 493 | 3.30.300.30 |
| 4futA01 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain | 0.9783 | 5 | 396 | 3.40.50.12780 |
| af_P96843_409_507_3.30.300.30 | Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain | 0.9735 | 399 | 496 | 3.30.300.30 |
| af_Q9SS00_444_572_3.30.300.30 | Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain | 0.9691 | 399 | 496 | 3.30.300.30 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A354VYQ4-F1-model_v4 | deleted | 0.9881 | 199 | 360 |
|
| AF-A0A354VYQ4-F1-model_v4 | deleted | 0.9761 | 199 | 360 |
|
| AF-A0A2E4XRB8-F1-model_v4 | AMP-binding enzyme C-terminal domain-containing protein | 0.972 | 401 | 501 |
GO:0006631
GO:0031956 |
| AF-A0A7K0MYV2-F1-model_v4 | Fatty acid--CoA ligase family protein | 0.9643 | 398 | 496 |
GO:0006631
GO:0031956 |
| AF-A0A522AV37-F1-model_v4 | AMP-dependent synthetase | 0.9618 | 405 | 502 |
GO:0016874
|
Predicted Structure (AlphaFold2)
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