F276031

General Info

Members Datasets Scaffolds Average Seq Length
180 128 161 332

Family's Representative Sequence

Representative Sequence 3300042876|Ga0451577_0000150|Ga0451577_0000150_28909_30105
Length 398
Sequence VDVAAGPNWEARIIGMAGRNADVGGDGKTDFPRPGSGKIRPAKRKISIARGRGSGYRLRPSMQNDSKFVLTHRPRRLRRFASRRAMVEETVVRPADLIAPLFVVDGSPAPEEISSMPGVFRLCIADLVKECAEIYALGVPAVALFPKLDPKLKDEVGTEALNPQTLILRAVRAVKQAVPELAIITDVALDPYTTHGHDGVLNAEKDNVDNDRTVAILAKMAVLQAEAGVDFVAPSDMMDGRVGAIRKSLDAAGYTDTAILAYSVKYNSAYYGPFRDAVGSAQAAGTRLLSKATYQMNPANRREAIREMQLDVAEGADVVMVKPAGAYLDVIREVRNATETPVAAYQVSGEYSQIHAASRLGWLDLVRTRNESLLAIKRAGADMILTYFAKEFAQAFKG

Samples

Sample ID Description Type Environment
1 2643221575 Microbacterium sp. Root61 Isolate Unclassified
2 2643221635 Yonghaparkia sp. Root332 Isolate Unclassified
3 2747842429 Microbacterium sp. WCS2014-259 Isolate Unclassified
4 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
5 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
6 2786546940 Opitutaceae bacterium EW11 Isolate Unclassified
7 2852677369 Pseudoclavibacter sp. JAI123 Isolate Rhizosphere
8 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
9 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
10 2904509784 Microbacterium sp. 1676 Isolate Rhizosphere
11 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
12 2914759650 Rhizosphaericola mali Isolate Rhizosphere
13 2919069694 Microbacterium sp. 1154 Isolate Unclassified
14 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
15 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
16 2977228692 Microbacterium sp. SORGH_AS 421 Isolate Unclassified
17 2977236895 Microbacterium testaceum SORGH_AS 426 Isolate Unclassified
18 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
19 2984542743 Microbacterium sp. SORGH_AS454 Isolate Aerial Root
20 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
21 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
22 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
23 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
26 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
29 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
32 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
33 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
34 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
41 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
42 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
43 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
44 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
48 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
66 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
67 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
68 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
69 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
70 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
71 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
72 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
73 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
74 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
75 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
76 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
77 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
78 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
79 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
80 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
81 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
82 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
83 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
84 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
85 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
86 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
87 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
88 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
89 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
90 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
95 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
96 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
97 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
98 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
99 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
100 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
101 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
102 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
103 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
104 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
105 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
106 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
107 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
111 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
112 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
113 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
115 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
116 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
117 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
118 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
119 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
120 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
121 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
123 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
124 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
125 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
126 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
127 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
128 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.89
Metatranscriptomes 0.56
Isolates 10.56

Biome Distribution

Category Percentage (%)
Aerial Root 0.56
Bulb 0
Endosphere 5
Nodule 0
Rhizoplane 0
Rhizosphere 82.22
Stem 0
Stem Tuber 0
Unclassified 12.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24743J22301_10001388 3300001991 Bacteria 3333
2 JGI24033J26618_1000521 3300002155 Bacteria 3747
3 rootH2_10000766 3300003320 Bacteria 10458
4 rootH2_10015376 3300003320 Bacteria 3927
5 rootH2_10019905 3300003320 Bacteria 4899
6 rootH2_10022925 3300003320 Bacteria 14695
7 Ga0065707_10120404 3300005295 Bacteria 2131
8 Ga0070658_10000065 3300005327 Bacteria 104621
9 Ga0070683_100006723 3300005329 Bacteria 9659
10 Ga0068869_100000086 3300005334 Bacteria 42241
11 Ga0068868_100197592 3300005338 Bacteria 1675
12 Ga0070675_100134136 3300005354 Bacteria 2112
13 Ga0070659_100051483 3300005366 Bacteria 3238
14 Ga0070663_100009025 3300005455 Bacteria 6159
15 Ga0070678_100009228 3300005456 Bacteria 5961
16 Ga0068867_100010369 3300005459 Bacteria 6574
17 Ga0068855_100028637 3300005563 Bacteria 6664
18 Ga0068856_100119801 3300005614 Bacteria 2633
19 Ga0068856_100141757 3300005614 Bacteria 2411
20 Ga0081455_10074243 3300005937 Bacteria 2809
21 Ga0075364_10001651 3300006051 Bacteria 12259
22 Ga0075362_10000005 3300006177 Bacteria 133842
23 Ga0097621_100021183 3300006237 Bacteria 5023
24 Ga0097621_100204212 3300006237 Bacteria 1717
25 Ga0068865_100001407 3300006881 Bacteria 14014
26 Ga0105244_10041943 3300009036 Bacteria 2369
27 Ga0105237_10001700 3300009545 Bacteria 28496
28 Ga0105238_10021890 3300009551 Bacteria 6513
29 Ga0157370_10007070 3300013104 Bacteria 12258
30 Ga0157369_10115944 3300013105 Bacteria 2845
31 Ga0157374_10008098 3300013296 Bacteria 8983
32 Ga0157378_10001993 3300013297 Bacteria 18249
33 Ga0157375_10080305 3300013308 Bacteria 3299
34 Ga0206354_11240098 3300020081 Bacteria 1459
35 Ga0209677_105877 3300025253 Bacteria 3072
36 Ga0207688_10068978 3300025901 Bacteria 2003
37 Ga0207705_10000001 3300025909 Bacteria 2061880
38 Ga0207671_10000621 3300025914 Bacteria 46642
39 Ga0207657_10025782 3300025919 Bacteria 5414
40 Ga0207649_10000744 3300025920 Bacteria 21400
41 Ga0207659_10150472 3300025926 Bacteria 1817
42 Ga0207690_10074789 3300025932 Bacteria 2347
43 Ga0207704_10000781 3300025938 Bacteria 14026
44 Ga0207689_10000023 3300025942 Bacteria 107806
45 Ga0207661_10398053 3300025944 Bacteria 1248
46 Ga0207667_10016651 3300025949 Bacteria 8297
47 Ga0207678_10024124 3300026067 Bacteria 5314
48 Ga0207702_10005944 3300026078 Bacteria 10599
49 Ga0207702_10150417 3300026078 Bacteria 2117
50 Ga0207648_10001277 3300026089 Bacteria 28143
51 Ga0207683_10017877 3300026121 Bacteria 6046
52 Ga0265319_1000032 3300028563 Bacteria 119321
53 Ga0265319_1000206 3300028563 Bacteria 44786
54 Ga0265319_1008491 3300028563 Bacteria 4496
55 Ga0265334_10002303 3300028573 Bacteria 8979
56 Ga0265334_10021797 3300028573 Bacteria 2615
57 Ga0265334_10086394 3300028573 Bacteria 1150
58 Ga0265318_10000005 3300028577 Bacteria 303630
59 Ga0265318_10000528 3300028577 Bacteria 27421
60 Ga0265318_10002302 3300028577 Bacteria 10255
61 Ga0265323_10008041 3300028653 Bacteria 4361
62 Ga0265323_10014050 3300028653 Bacteria 3180
63 Ga0265323_10025675 3300028653 Bacteria 2226
64 Ga0265323_10028741 3300028653 Bacteria 2083
65 Ga0265322_10004124 3300028654 Bacteria 4343
66 Ga0265336_10001672 3300028666 Bacteria 9804
67 Ga0265338_10008210 3300028800 Bacteria 12718
68 Ga0265324_10005685 3300029957 Bacteria 5325
69 Ga0265330_10027031 3300031235 Bacteria 2593
70 Ga0265320_10000301 3300031240 Bacteria 40337
71 Ga0265320_10016277 3300031240 Bacteria 4171
72 Ga0265320_10028892 3300031240 Bacteria 2874
73 Ga0265320_10029283 3300031240 Bacteria 2849
74 Ga0265320_10057938 3300031240 Bacteria 1857
75 Ga0265320_10066749 3300031240 Bacteria 1704
76 Ga0265320_10084602 3300031240 Bacteria 1477
77 Ga0265329_10019946 3300031242 Bacteria 2269
78 Ga0265331_10009015 3300031250 Bacteria 5637
79 Ga0265331_10010007 3300031250 Bacteria 5274
80 Ga0265327_10000750 3300031251 Bacteria 50498
81 Ga0265327_10003576 3300031251 Bacteria 14693
82 Ga0265327_10035235 3300031251 Bacteria 2769
83 Ga0265316_10002267 3300031344 Bacteria 20153
84 Ga0265316_10079629 3300031344 Bacteria 2513
85 Ga0307408_100000033 3300031548 Bacteria 212574
86 Ga0265313_10002083 3300031595 Bacteria 17876
87 Ga0265313_10003169 3300031595 Bacteria 13574
88 Ga0265313_10026566 3300031595 Bacteria 3047
89 Ga0307508_10000157 3300031616 Bacteria 81275
90 Ga0265314_10003620 3300031711 Bacteria 14859
91 Ga0265314_10008044 3300031711 Bacteria 9087
92 Ga0265314_10011185 3300031711 Bacteria 7432
93 Ga0265314_10045211 3300031711 Bacteria 3115
94 Ga0265314_10077237 3300031711 Bacteria 2210
95 Ga0265314_10131145 3300031711 Bacteria 1563
96 Ga0265342_10069555 3300031712 Bacteria 2055
97 Ga0265342_10073114 3300031712 Bacteria 1994
98 Ga0316576_10137256 3300031727 Bacteria 1841
99 Ga0307405_10044087 3300031731 Bacteria 2726
100 Ga0307410_10000025 3300031852 Bacteria 58385
101 Ga0307406_10060507 3300031901 Bacteria 2442
102 Ga0307409_100001424 3300031995 Bacteria 11739
103 Ga0307409_100309272 3300031995 Bacteria 1474
104 Ga0307416_100000061 3300032002 Bacteria 99793
105 Ga0307416_100495577 3300032002 Bacteria 1285
106 Ga0307414_10245616 3300032004 Bacteria 1485
107 Ga0307415_100260773 3300032126 Bacteria 1414
108 Ga0395905_0000015 3300037471 Bacteria 393880
109 Ga0395901_0160258 3300038443 Bacteria 2363
110 Ga0451841_0308954 3300041498 Bacteria 1545
111 Ga0439445_0013610 3300042004 Bacteria 1971
112 Ga0451577_0000150 3300042876 Bacteria 154181
113 Ga0466966_0089336 3300044684 Bacteria 1914
114 Ga0466961_0142485 3300044693 Bacteria 1500
115 Ga0466964_0030934 3300044706 Bacteria 2121
116 Ga0453684_0042799 3300044712 Bacteria 6098
117 Ga0453684_0149346 3300044712 Bacteria 2779
118 Ga0453684_0312551 3300044712 Bacteria 1782
119 Ga0466971_0000106 3300044719 Bacteria 30327
120 Ga0451576_0002289 3300045051 Bacteria 29109
121 Ga0451576_0132372 3300045051 Bacteria 2600
122 Ga0496117_0001818 3300048920 Bacteria 28966
123 Ga0496120_0006465 3300048923 Bacteria 8987
124 Ga0496124_0189791 3300048927 Bacteria 1574
125 Ga0496125_0000006 3300048928 Bacteria 759385
126 Ga0501032_0000093 3300049569 Bacteria 76932
127 Ga0501032_0000179 3300049569 Bacteria 52139
128 Ga0501033_0000013 3300049570 Bacteria 232799
129 Ga0501033_0000024 3300049570 Bacteria 175859
130 Ga0501033_0033790 3300049570 Bacteria 3839
131 Ga0501034_0056461 3300049571 Bacteria 3951
132 Ga0501037_0000074 3300049573 Bacteria 93413
133 Ga0501037_0002641 3300049573 Bacteria 12919
134 Ga0501038_0000212 3300049574 Bacteria 49792
135 Ga0501038_0009991 3300049574 Bacteria 8689
136 Ga0501043_0000267 3300049579 Bacteria 47095
137 Ga0501043_0032265 3300049579 Bacteria 4117
138 Ga0501046_0002412 3300049580 Bacteria 17518
139 Ga0501046_0018568 3300049580 Bacteria 5782
140 Ga0501047_0007882 3300049581 Bacteria 10040
141 Ga0501047_0254020 3300049581 Bacteria 1606
142 Ga0501048_0038480 3300049582 Bacteria 3431
143 Ga0501068_0183561 3300049584 Bacteria 1323
144 Ga0501070_0034373 3300049586 Bacteria 4239
145 Ga0501080_0214854 3300049742 Bacteria 1762
146 Ga0501083_0013649 3300049744 Bacteria 5681
147 Ga0501083_0014682 3300049744 Bacteria 5476
148 Ga0501035_0001976 3300049822 Bacteria 20524
149 Ga0501044_0000050 3300049823 Bacteria 143754
150 Ga0501044_0000528 3300049823 Bacteria 46605
151 Ga0501044_0002663 3300049823 Bacteria 20313
152 Ga0501044_0053515 3300049823 Bacteria 4152
153 Ga0501044_0231872 3300049823 Bacteria 1793
154 Ga0501045_0007264 3300049824 Bacteria 7692
155 nmdc:mga03683_1_c2 3300050489 Bacteria 239664
156 nmdc:mga00v17_191_c1 3300050491 Bacteria 36948
157 Ga0500642_0083727 3300053130 Bacteria 1468
158 Ga0500573_0004051 3300053140 Bacteria 7664
159 Ga0500573_0044859 3300053140 Bacteria 2549
160 Ga0500645_031448 3300053730 Bacteria 1595
161 Ga0466962_0000017 3300061719 Bacteria 97361

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300003320 rootH2_10022925 rootH2_1002292510 279
2 3300032126 Ga0307415_100260773 Ga0307415_1002607731 286
3 3300009545 Ga0105237_10001700 Ga0105237_1000170024 300
4 3300009551 Ga0105238_10021890 Ga0105238_100218904 300
5 iso_pu_bacteria 2786546548 2787509207 303
6 3300020081 Ga0206354_11240098 Ga0206354_112400981 304
7 3300025253 Ga0209677_105877 Ga0209677_1058773 304
8 3300038443 Ga0395901_0160258 Ga0395901_0160258_409_1335 304
9 3300049570 Ga0501033_0033790 Ga0501033_0033790_2627_3553 304
10 3300049573 Ga0501037_0002641 Ga0501037_0002641_1185_2111 304
11 3300049579 Ga0501043_0032265 Ga0501043_0032265_78_1004 304
12 3300049580 Ga0501046_0002412 Ga0501046_0002412_359_1285 304
13 3300049582 Ga0501048_0038480 Ga0501048_0038480_565_1491 304
14 3300049584 Ga0501068_0183561 Ga0501068_0183561_58_984 304
15 3300049586 Ga0501070_0034373 Ga0501070_0034373_104_1030 304
16 3300049742 Ga0501080_0214854 Ga0501080_0214854_750_1676 304
17 3300049823 Ga0501044_0053515 Ga0501044_0053515_3167_4093 304
18 3300049824 Ga0501045_0007264 Ga0501045_0007264_695_1621 304
19 3300025920 Ga0207649_10000744 Ga0207649_100007449 306
20 3300049579 Ga0501043_0000267 Ga0501043_0000267_21903_22889 315
21 3300005327 Ga0070658_10000065 Ga0070658_10000065109 316
22 3300005455 Ga0070663_100009025 Ga0070663_1000090254 316
23 3300005563 Ga0068855_100028637 Ga0068855_1000286372 316
24 3300013104 Ga0157370_10007070 Ga0157370_1000707012 316
25 3300025909 Ga0207705_10000001 Ga0207705_100000011104 316
26 3300025919 Ga0207657_10025782 Ga0207657_100257823 316
27 3300025949 Ga0207667_10016651 Ga0207667_100166512 316
28 3300026067 Ga0207678_10024124 Ga0207678_100241243 316
29 iso_pu_bacteria 2643221575 2643887954 316
30 iso_pu_bacteria 2747842429 2747953246 316
31 iso_pu_bacteria 2773857758 2774379687 316
32 iso_pu_bacteria 2852677369 2852677503 316
33 iso_pu_bacteria 2857729791 2857731537 316
34 iso_pu_bacteria 2870622029 2870625260 316
35 iso_pu_bacteria 2904509784 2904512478 316
36 iso_pu_bacteria 2908678064 2908679284 316
37 iso_pu_bacteria 2919069694 2919069928 316
38 iso_pu_bacteria 2928121344 2928124565 316
39 iso_pu_bacteria 2946041624 2946041645 316
40 iso_pu_bacteria 2977228692 2977229485 316
41 iso_pu_bacteria 2977236895 2977238471 316
42 iso_pu_bacteria 2977264416 2977264701 316
43 iso_pu_bacteria 2984542743 2984543748 316
44 iso_pu_bacteria 2643221635 2644197661 318
45 3300009036 Ga0105244_10041943 Ga0105244_100419432 320
46 3300013105 Ga0157369_10115944 Ga0157369_101159442 320
47 3300025914 Ga0207671_10000621 Ga0207671_1000062137 320
48 3300031731 Ga0307405_10044087 Ga0307405_100440873 320
49 3300031901 Ga0307406_10060507 Ga0307406_100605072 320
50 3300041498 Ga0451841_0308954 Ga0451841_0308954_318_1325 320
51 3300048920 Ga0496117_0001818 Ga0496117_0001818_21555_22541 320
52 3300048923 Ga0496120_0006465 Ga0496120_0006465_7055_8041 320
53 3300053140 Ga0500573_0044859 Ga0500573_0044859_455_1435 320
54 iso_pu_bacteria 2914759650 2914762397 320
55 3300005329 Ga0070683_100006723 Ga0070683_1000067234 321
56 3300005614 Ga0068856_100141757 Ga0068856_1001417572 321
57 3300025944 Ga0207661_10398053 Ga0207661_103980532 321
58 3300026078 Ga0207702_10150417 Ga0207702_101504172 321
59 3300031995 Ga0307409_100309272 Ga0307409_1003092722 321
60 3300032002 Ga0307416_100495577 Ga0307416_1004955771 321
61 3300032004 Ga0307414_10245616 Ga0307414_102456162 321
62 3300053140 Ga0500573_0004051 Ga0500573_0004051_4892_5914 321
63 3300006051 Ga0075364_10001651 Ga0075364_100016516 323
64 3300006177 Ga0075362_10000005 Ga0075362_10000005132 323
65 3300050489 nmdc:mga03683_1_c2 nmdc:mga03683_1_c2_111058_112062 323
66 3300050491 nmdc:mga00v17_191_c1 nmdc:mga00v17_191_c1_30346_31350 323
67 3300031727 Ga0316576_10137256 Ga0316576_101372562 324
68 3300053130 Ga0500642_0083727 Ga0500642_0083727_11_1033 325
69 3300048927 Ga0496124_0189791 Ga0496124_0189791_40_1023 326
70 3300048928 Ga0496125_0000006 Ga0496125_0000006_427575_428558 326
71 3300002155 JGI24033J26618_1000521 JGI24033J26618_10005215 327
72 3300005295 Ga0065707_10120404 Ga0065707_101204042 327
73 3300005354 Ga0070675_100134136 Ga0070675_1001341362 327
74 3300005366 Ga0070659_100051483 Ga0070659_1000514833 327
75 3300005456 Ga0070678_100009228 Ga0070678_1000092283 327
76 3300005937 Ga0081455_10074243 Ga0081455_100742432 327
77 3300013296 Ga0157374_10008098 Ga0157374_100080982 327
78 3300013297 Ga0157378_10001993 Ga0157378_100019932 327
79 3300013308 Ga0157375_10080305 Ga0157375_100803052 327
80 3300025926 Ga0207659_10150472 Ga0207659_101504722 327
81 3300025932 Ga0207690_10074789 Ga0207690_100747892 327
82 3300026121 Ga0207683_10017877 Ga0207683_100178773 327
83 3300049569 Ga0501032_0000179 Ga0501032_0000179_32133_33116 327
84 3300049570 Ga0501033_0000013 Ga0501033_0000013_107373_108356 327
85 3300049574 Ga0501038_0000212 Ga0501038_0000212_31568_32560 327
86 3300053730 Ga0500645_031448 Ga0500645_031448_282_1289 327
87 3300001991 JGI24743J22301_10001388 JGI24743J22301_100013884 328
88 3300003320 rootH2_10000766 rootH2_100007667 328
89 3300003320 rootH2_10015376 rootH2_100153764 328
90 3300003320 rootH2_10019905 rootH2_100199054 328
91 3300005334 Ga0068869_100000086 Ga0068869_10000008635 328
92 3300005338 Ga0068868_100197592 Ga0068868_1001975922 328
93 3300005459 Ga0068867_100010369 Ga0068867_1000103693 328
94 3300005614 Ga0068856_100119801 Ga0068856_1001198011 328
95 3300006237 Ga0097621_100021183 Ga0097621_1000211832 328
96 3300006237 Ga0097621_100204212 Ga0097621_1002042122 328
97 3300006881 Ga0068865_100001407 Ga0068865_1000014075 328
98 3300025901 Ga0207688_10068978 Ga0207688_100689783 328
99 3300025938 Ga0207704_10000781 Ga0207704_100007815 328
100 3300025942 Ga0207689_10000023 Ga0207689_10000023104 328
101 3300026078 Ga0207702_10005944 Ga0207702_100059447 328
102 3300026089 Ga0207648_10001277 Ga0207648_1000127723 328
103 3300028563 Ga0265319_1000032 Ga0265319_100003238 328
104 3300028563 Ga0265319_1000206 Ga0265319_10002068 328
105 3300028563 Ga0265319_1008491 Ga0265319_10084913 328
106 3300028573 Ga0265334_10002303 Ga0265334_100023033 328
107 3300028573 Ga0265334_10021797 Ga0265334_100217972 328
108 3300028573 Ga0265334_10086394 Ga0265334_100863941 328
109 3300028577 Ga0265318_10000005 Ga0265318_1000000560 328
110 3300028577 Ga0265318_10000528 Ga0265318_1000052812 328
111 3300028577 Ga0265318_10002302 Ga0265318_100023023 328
112 3300028653 Ga0265323_10008041 Ga0265323_100080412 328
113 3300028653 Ga0265323_10014050 Ga0265323_100140503 328
114 3300028653 Ga0265323_10025675 Ga0265323_100256752 328
115 3300028653 Ga0265323_10028741 Ga0265323_100287412 328
116 3300028654 Ga0265322_10004124 Ga0265322_100041242 328
117 3300028666 Ga0265336_10001672 Ga0265336_100016726 328
118 3300028800 Ga0265338_10008210 Ga0265338_100082106 328
119 3300029957 Ga0265324_10005685 Ga0265324_100056851 328
120 3300031235 Ga0265330_10027031 Ga0265330_100270312 328
121 3300031240 Ga0265320_10000301 Ga0265320_100003016 328
122 3300031240 Ga0265320_10016277 Ga0265320_100162773 328
123 3300031240 Ga0265320_10028892 Ga0265320_100288923 328
124 3300031240 Ga0265320_10029283 Ga0265320_100292832 328
125 3300031240 Ga0265320_10057938 Ga0265320_100579382 328
126 3300031240 Ga0265320_10066749 Ga0265320_100667492 328
127 3300031240 Ga0265320_10084602 Ga0265320_100846022 328
128 3300031242 Ga0265329_10019946 Ga0265329_100199462 328
129 3300031250 Ga0265331_10009015 Ga0265331_100090155 328
130 3300031250 Ga0265331_10010007 Ga0265331_100100075 328
131 3300031251 Ga0265327_10000750 Ga0265327_1000075034 328
132 3300031251 Ga0265327_10003576 Ga0265327_100035765 328
133 3300031251 Ga0265327_10035235 Ga0265327_100352352 328
134 3300031344 Ga0265316_10002267 Ga0265316_100022679 328
135 3300031344 Ga0265316_10079629 Ga0265316_100796292 328
136 3300031548 Ga0307408_100000033 Ga0307408_10000003363 328
137 3300031595 Ga0265313_10002083 Ga0265313_1000208311 328
138 3300031595 Ga0265313_10003169 Ga0265313_100031699 328
139 3300031595 Ga0265313_10026566 Ga0265313_100265662 328
140 3300031616 Ga0307508_10000157 Ga0307508_1000015754 328
141 3300031711 Ga0265314_10003620 Ga0265314_100036206 328
142 3300031711 Ga0265314_10008044 Ga0265314_100080448 328
143 3300031711 Ga0265314_10011185 Ga0265314_100111855 328
144 3300031711 Ga0265314_10045211 Ga0265314_100452112 328
145 3300031711 Ga0265314_10077237 Ga0265314_100772373 328
146 3300031711 Ga0265314_10131145 Ga0265314_101311452 328
147 3300031712 Ga0265342_10069555 Ga0265342_100695552 328
148 3300031712 Ga0265342_10073114 Ga0265342_100731142 328
149 3300031852 Ga0307410_10000025 Ga0307410_1000002543 328
150 3300031995 Ga0307409_100001424 Ga0307409_1000014246 328
151 3300032002 Ga0307416_100000061 Ga0307416_10000006176 328
152 3300037471 Ga0395905_0000015 Ga0395905_0000015_277822_278889 328
153 3300042004 Ga0439445_0013610 Ga0439445_0013610_871_1881 328
154 3300042876 Ga0451577_0000150 Ga0451577_0000150_28909_30105 328
155 3300044684 Ga0466966_0089336 Ga0466966_0089336_51_1064 328
156 3300044693 Ga0466961_0142485 Ga0466961_0142485_446_1459 328
157 3300044706 Ga0466964_0030934 Ga0466964_0030934_352_1338 328
158 3300044712 Ga0453684_0042799 Ga0453684_0042799_3946_4959 328
159 3300044712 Ga0453684_0149346 Ga0453684_0149346_1560_2567 328
160 3300044712 Ga0453684_0312551 Ga0453684_0312551_503_1522 328
161 3300044719 Ga0466971_0000106 Ga0466971_0000106_5062_6048 328
162 3300045051 Ga0451576_0002289 Ga0451576_0002289_1733_2740 328
163 3300045051 Ga0451576_0132372 Ga0451576_0132372_914_1924 328
164 3300049569 Ga0501032_0000093 Ga0501032_0000093_4752_5765 328
165 3300049570 Ga0501033_0000024 Ga0501033_0000024_97296_98282 328
166 3300049571 Ga0501034_0056461 Ga0501034_0056461_1924_2937 328
167 3300049573 Ga0501037_0000074 Ga0501037_0000074_76110_77186 328
168 3300049574 Ga0501038_0009991 Ga0501038_0009991_822_1808 328
169 3300049580 Ga0501046_0018568 Ga0501046_0018568_3740_4753 328
170 3300049581 Ga0501047_0007882 Ga0501047_0007882_4178_5191 328
171 3300049581 Ga0501047_0254020 Ga0501047_0254020_118_1128 328
172 3300049744 Ga0501083_0013649 Ga0501083_0013649_2928_3938 328
173 3300049744 Ga0501083_0014682 Ga0501083_0014682_3471_4481 328
174 3300049822 Ga0501035_0001976 Ga0501035_0001976_14681_15694 328
175 3300049823 Ga0501044_0000050 Ga0501044_0000050_7947_8960 328
176 3300049823 Ga0501044_0000528 Ga0501044_0000528_29948_31024 328
177 3300049823 Ga0501044_0002663 Ga0501044_0002663_7885_8895 328
178 3300049823 Ga0501044_0231872 Ga0501044_0231872_735_1721 328
179 3300061719 Ga0466962_0000017 Ga0466962_0000017_29176_30162 328
180 iso_pu_bacteria 2786546940 2788435980 328

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00490

ALAD

Delta-aminolevulinic acid dehydratase

71

395

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
1w54-assembly1.cif.gz_A stepwise introduction of a zinc binding site into porphobilinogen synthase from pseudomonas aeruginosa (mutation d139c) 0.9756 7 328
3obk-assembly1.cif.gz_H crystal structure of delta-aminolevulinic acid dehydratase (porphobilinogen synthase) from toxoplasma gondii me49 in complex with the reaction product porphobilinogen 0.9734 3 328
2c14-assembly1.cif.gz_A 5-(4-carboxy-2-oxo-butylamino)-4-oxo-pentanoic acid acid bound to porphobilinogen synthase from pseudomonas aeruginosa 0.9728 7 328
2c15-assembly1.cif.gz_A 5-(4-carboxy-2-oxo-butoxy)-4-oxo-pentanoic acid acid bound to porphobilinogen synthase from pseudomonas aeruginosa 0.972 7 328
2c1h-assembly1.cif.gz_A the x-ray structure of chlorobium vibrioforme 5-aminolaevulinic acid dehydratase complexed with a diacid inhibitor 0.9719 7 328
ID Description Score Start End Superfamily
af_P9WMP5_2_329_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9615 1 325 3.20.20.70
1i8jA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9611 4 327 3.20.20.70
2c19A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9583 7 326 3.20.20.70
5hnrA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9508 15 327 3.20.20.70
af_Q60178_5_334_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9494 1 328 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A0F3N939-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 0.9866 58 327 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A1M3CNR5-F1-model_v4 deleted 0.9863 3 328
AF-A0A6I1JEJ1-F1-model_v4 Delta-aminolevulinic acid dehydratase (EC 4.2.1.24) 0.986 43 325 GO:0004655
GO:0005829
GO:0006782
GO:0008270
AF-A0A5C9D5R9-F1-model_v4 deleted 0.9855 49 327
AF-A0A658S456-F1-model_v4 deleted 0.985 73 326

Feature Viewer

pLDDT pTM Quality
94.18 0.92 High
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Predicted Structure (AlphaFold2)

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