F267520

General Info

Members Datasets Scaffolds Average Seq Length
176 130 352 424

Family's Representative Sequence

Representative Sequence 3300005288|Ga0065714_10012378|Ga0065714_100123782
Length 458
Sequence MTNPTAPGTPASGPTGARPGDQTQTAAELALEWAADPRWEGVRRDYTAEDVIALRGAVREERTLARRGAEKLWDLIHENGTPENPEWVAALGALTGNQAVQQVRAGLKAIYLSGWQVAADANLSGQTYPDQSLYPANSVPAVVRRINNALLRAGQIEGAEAVASGADATDNGRGIDWMAPIVADAEAGFGGPLNAYELMASMIEAGAAGVHWEDQLASEKKCGHMGGKVLVPTGQHIRTLNAARLAADVAGVPTIIIARTDSLAATLITSDIDERDQEFLTGGRTAEGFYDTANGPDVVIARGLAYAPYADLLWVESSEPDLALAQRFAKEVHARFPGKKLAYNCSPSFNWKSHLNDEQIAAFQRELAACGYAFQFITLAGFHALNHSMFTLAKDYSERQMSAYVDLQEAEFASEADGYTATRHQREVGTGYFDRIATALNPTSATLALAGSTEAEQF

Samples

Sample ID Description Type Environment
1 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
7 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
17 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
23 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
24 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
32 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
33 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
44 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
46 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
47 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
48 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
49 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
54 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
55 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
56 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
57 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
62 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
63 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
64 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
65 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
66 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
67 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
68 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
69 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
70 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
71 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
72 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
73 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
74 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
75 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
76 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
77 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
78 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
79 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
80 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
81 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
82 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
83 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
84 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
88 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
89 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
98 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
99 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
100 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
101 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
102 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
103 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
104 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
105 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
106 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
107 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
108 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
109 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
110 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
112 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
113 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
114 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
115 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
116 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
117 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
118 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
119 2643221649 Leifsonia sp. Root4 Isolate Unclassified
120 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
121 2773857759 Microbacterium sp. 1294 Isolate Unclassified
122 2811994880 Cellulomonas sp. SLBN-39 Isolate Unclassified
123 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
124 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
125 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
126 2857733635 Salinibacterium sp. R-73062 Isolate Unclassified
127 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
128 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere
129 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
130 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.05
Metatranscriptomes 1.14
Isolates 6.82

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.14
Nodule 0
Rhizoplane 1.7
Rhizosphere 85.23
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065714_10012378 3300005288 Bacteria 2297
2 JGI25153J46596_10011021 3300003215 Bacteria 4031
3 JGI25407J50210_10005243 3300003373 Bacteria 3179
4 Ga0070676_10036367 3300005328 Bacteria 2837
5 Ga0070683_100006269 3300005329 Bacteria 9982
6 Ga0070673_100088815 3300005364 Bacteria 2522
7 Ga0070688_100035320 3300005365 Bacteria 3036
8 Ga0070709_10006964 3300005434 Bacteria 6173
9 Ga0070714_100000808 3300005435 Bacteria 22108
10 Ga0070713_100021740 3300005436 Bacteria 4943
11 Ga0070710_10005782 3300005437 Bacteria 5893
12 Ga0070701_10010334 3300005438 Bacteria 4123
13 Ga0070700_100044326 3300005441 Bacteria 2739
14 Ga0070684_100033349 3300005535 Bacteria 4395
15 Ga0068853_100008156 3300005539 Bacteria 8407
16 Ga0070686_100036743 3300005544 Bacteria 3035
17 Ga0070665_100000229 3300005548 Bacteria 93160
18 Ga0081455_10000005 3300005937 Bacteria 327136
19 Ga0081455_10014543 3300005937 Bacteria 7705
20 Ga0081538_10003384 3300005981 Bacteria 15091
21 Ga0081538_10009687 3300005981 Bacteria 7998
22 Ga0081539_10051465 3300005985 Bacteria 2320
23 Ga0075428_100000784 3300006844 Bacteria 33108
24 Ga0075433_10010198 3300006852 Bacteria 7535
25 Ga0068865_100173626 3300006881 Bacteria 1654
26 Ga0105240_10042037 3300009093 Bacteria 5827
27 Ga0111539_10039871 3300009094 Bacteria 5656
28 Ga0114129_10009910 3300009147 Bacteria 13582
29 Ga0114129_10060119 3300009147 Bacteria 5313
30 Ga0114129_10422086 3300009147 Bacteria 1754
31 Ga0105248_10046731 3300009177 Bacteria 4853
32 Ga0105237_10001271 3300009545 Bacteria 33636
33 Ga0157369_10172540 3300013105 Bacteria 2278
34 Ga0163163_10001476 3300014325 Bacteria 19912
35 Ga0157377_10005791 3300014745 Bacteria 5835
36 Ga0209147_100136 3300025229 Bacteria 117683
37 Ga0207645_10104534 3300025907 Bacteria 1829
38 Ga0207662_10020424 3300025918 Bacteria 3780
39 Ga0207664_10207853 3300025929 Bacteria 1692
40 Ga0207677_10074686 3300026023 Bacteria 2407
41 Ga0207639_10011894 3300026041 Bacteria 6054
42 Ga0207678_10090635 3300026067 Bacteria 2613
43 Ga0207708_10011160 3300026075 Bacteria 6684
44 Ga0207641_10062823 3300026088 Bacteria 3171
45 Ga0207648_10006653 3300026089 Bacteria 11473
46 Ga0207683_10243597 3300026121 Bacteria 1640
47 Ga0207428_10018363 3300027907 Bacteria 5976
48 Ga0268266_10003000 3300028379 Bacteria 17365
49 Ga0265322_10004787 3300028654 Bacteria 4012
50 Ga0307518_10093980 3300031838 Bacteria 2154
51 Ga0307410_10009901 3300031852 Bacteria 5374
52 Ga0307406_10024518 3300031901 Bacteria 3604
53 Ga0307412_10071109 3300031911 Bacteria 2374
54 Ga0307416_100027487 3300032002 Bacteria 4214
55 Ga0307411_10026385 3300032005 Bacteria 3498
56 Ga0307411_10042045 3300032005 Bacteria 2913
57 Ga0307415_100001386 3300032126 Bacteria 11564
58 Ga0316593_10002703 3300032168 Bacteria 4269
59 Ga0316593_10006641 3300032168 Bacteria 3136
60 Ga0373940_0000235 3300035088 Bacteria 7871
61 Ga0373932_0000115 3300035112 Bacteria 22238
62 Ga0373942_0007604 3300035207 Bacteria 2516
63 Ga0373937_0307003 3300036401 Bacteria 1500
64 Ga0395905_0100443 3300037471 Bacteria 2717
65 Ga0436364_1484048 3300037853 Bacteria 18198
66 Ga0395901_0508335 3300038443 Bacteria 1226
67 Ga0400484_17279 3300038725 Bacteria 6513
68 Ga0400490_32015 3300038726 Bacteria 4232
69 Ga0400488_23563 3300038741 Bacteria 5848
70 Ga0400489_14926 3300039093 Bacteria 4286
71 Ga0451797_1107812 3300041453 Bacteria 1492
72 Ga0453683_0005701 3300044673 Bacteria 8645
73 Ga0466963_0046078 3300044694 Bacteria 2874
74 Ga0466968_0079334 3300044735 Bacteria 1440
75 Ga0495580_0017529 3300046472 Bacteria 5354
76 Ga0495664_0006853 3300046477 Bacteria 6307
77 Ga0495594_0088095 3300046499 Bacteria 1738
78 Ga0495618_0018370 3300046514 Bacteria 4293
79 Ga0495620_0098602 3300046515 Bacteria 1166
80 Ga0495645_0030057 3300046543 Bacteria 3957
81 Ga0495667_0031443 3300046559 Bacteria 3564
82 Ga0496112_0327999 3300048915 Bacteria 1475
83 Ga0496115_0066026 3300048918 Bacteria 2923
84 Ga0496117_0000061 3300048920 Bacteria 258454
85 Ga0496119_0020051 3300048922 Bacteria 4892
86 Ga0496120_0004042 3300048923 Bacteria 12700
87 Ga0496122_0002352 3300048925 Bacteria 27214
88 Ga0496123_0004086 3300048926 Bacteria 15707
89 Ga0496126_0029564 3300048929 Bacteria 5204
90 Ga0501031_0003982 3300049568 Bacteria 9523
91 Ga0501031_0030720 3300049568 Bacteria 3504
92 Ga0501032_0030535 3300049569 Bacteria 3698
93 Ga0501033_0027462 3300049570 Bacteria 4279
94 Ga0501036_0000471 3300049572 Bacteria 28746
95 Ga0501036_0000765 3300049572 Bacteria 23855
96 Ga0501037_0014388 3300049573 Bacteria 5824
97 Ga0501037_0072089 3300049573 Bacteria 2512
98 Ga0501038_0020464 3300049574 Bacteria 5947
99 Ga0501038_0053942 3300049574 Bacteria 3458
100 Ga0501038_0055391 3300049574 Bacteria 3406
101 Ga0501039_0004114 3300049575 Bacteria 10952
102 Ga0501039_0014073 3300049575 Bacteria 6124
103 Ga0501039_0014292 3300049575 Bacteria 6078
104 Ga0501040_0000440 3300049576 Bacteria 24716
105 Ga0501040_0001402 3300049576 Bacteria 15237
106 Ga0501040_0003960 3300049576 Bacteria 9619
107 Ga0501041_0000162 3300049577 Bacteria 29844
108 Ga0501041_0000317 3300049577 Bacteria 23532
109 Ga0501042_0000072 3300049578 Bacteria 37270
110 Ga0501042_0000877 3300049578 Bacteria 16811
111 Ga0501042_0001511 3300049578 Bacteria 13745
112 Ga0501046_0000378 3300049580 Bacteria 44750
113 Ga0501046_0001113 3300049580 Bacteria 26232
114 Ga0501046_0124563 3300049580 Bacteria 1959
115 Ga0501046_0234422 3300049580 Bacteria 1355
116 Ga0501047_0022354 3300049581 Bacteria 6074
117 Ga0501048_0000265 3300049582 Bacteria 35122
118 Ga0501048_0006541 3300049582 Bacteria 8858
119 Ga0501048_0037363 3300049582 Bacteria 3487
120 Ga0501068_0003040 3300049584 Bacteria 8959
121 Ga0501068_0087345 3300049584 Bacteria 1920
122 Ga0501069_0036968 3300049585 Bacteria 2694
123 Ga0501069_0064077 3300049585 Bacteria 2054
124 Ga0501071_0000049 3300049587 Bacteria 41685
125 Ga0501071_0004411 3300049587 Bacteria 8927
126 Ga0501071_0012729 3300049587 Bacteria 5719
127 Ga0501072_0001793 3300049588 Bacteria 15983
128 Ga0501072_0006773 3300049588 Bacteria 8696
129 Ga0501072_0018566 3300049588 Bacteria 5359
130 Ga0501072_0117381 3300049588 Bacteria 2119
131 Ga0501074_0009671 3300049590 Bacteria 7000
132 Ga0501075_0000620 3300049591 Bacteria 21704
133 Ga0501075_0000738 3300049591 Bacteria 20299
134 Ga0501075_0082705 3300049591 Bacteria 2432
135 Ga0501076_0002925 3300049592 Bacteria 11839
136 Ga0501076_0016096 3300049592 Bacteria 5662
137 Ga0501077_0001131 3300049593 Bacteria 16098
138 Ga0501077_0005694 3300049593 Bacteria 7593
139 Ga0501077_0031446 3300049593 Bacteria 3377
140 Ga0501077_0040574 3300049593 Bacteria 2965
141 Ga0501079_0000457 3300049741 Bacteria 26796
142 Ga0501079_0011155 3300049741 Bacteria 6852
143 Ga0501080_0051467 3300049742 Bacteria 3832
144 Ga0501081_0001775 3300049743 Bacteria 13370
145 Ga0501081_0014881 3300049743 Bacteria 5132
146 Ga0501083_0008176 3300049744 Bacteria 7400
147 Ga0501035_0018040 3300049822 Bacteria 6503
148 Ga0501035_0069719 3300049822 Bacteria 3115
149 Ga0501044_0057476 3300049823 Bacteria 3992
150 Ga0501045_0000181 3300049824 Bacteria 35044
151 Ga0501045_0000262 3300049824 Bacteria 30521
152 Ga0501045_0000608 3300049824 Bacteria 22583
153 Ga0501045_0059210 3300049824 Bacteria 2805
154 nmdc:mga05p37_7261_c1 3300050507 Bacteria 13071
155 nmdc:mga09592_248986_c1 3300050508 Bacteria 1540
156 nmdc:mga08y16_267208_c1 3300050511 Bacteria 1766
157 nmdc:mga08y16_50410_c1 3300050511 Bacteria 4356
158 nmdc:mga0a205_58469_c1 3300050515 Bacteria 3724
159 Ga0501084_0000825 3300054114 Bacteria 23857
160 Ga0501084_0001729 3300054114 Bacteria 17328
161 Ga0501084_0024033 3300054114 Bacteria 5082
162 Ga0501082_0000871 3300060353 Bacteria 26649
163 Ga0501082_0000877 3300060353 Bacteria 26573
164 Ga0530510_0010945 3300061734 Bacteria 6364
165 2644279036 2643221649 Bacteria 3867359
166 2758227040 2757320536 Bacteria 3629334
167 2774383117 2773857759 Bacteria 2963774
168 2812363115 2811994880 Bacteria 4147780
169 2832005044 2832004796 Bacteria 6538017
170 2857464228 2857460504 Bacteria 5194327
171 2857732006 2857729791 Bacteria 4040535
172 2857736679 2857733635 Bacteria 3532004
173 2866070908 2866065130 Bacteria 6518152
174 2928124132 2928121344 Bacteria 3972376
175 8016256581 8016254467 Bacteria 3797036
176 8025482438 8025478263 Bacteria 8209203
177 Ga0065714_10012378
178 JGI25153J46596_10011021
179 JGI25407J50210_10005243
180 Ga0070676_10036367
181 Ga0070683_100006269
182 Ga0070673_100088815
183 Ga0070688_100035320
184 Ga0070709_10006964
185 Ga0070714_100000808
186 Ga0070713_100021740
187 Ga0070710_10005782
188 Ga0070701_10010334
189 Ga0070700_100044326
190 Ga0070684_100033349
191 Ga0068853_100008156
192 Ga0070686_100036743
193 Ga0070665_100000229
194 Ga0081455_10000005
195 Ga0081455_10014543
196 Ga0081538_10003384
197 Ga0081538_10009687
198 Ga0081539_10051465
199 Ga0075428_100000784
200 Ga0075433_10010198
201 Ga0068865_100173626
202 Ga0105240_10042037
203 Ga0111539_10039871
204 Ga0114129_10009910
205 Ga0114129_10060119
206 Ga0114129_10422086
207 Ga0105248_10046731
208 Ga0105237_10001271
209 Ga0157369_10172540
210 Ga0163163_10001476
211 Ga0157377_10005791
212 Ga0209147_100136
213 Ga0207645_10104534
214 Ga0207662_10020424
215 Ga0207664_10207853
216 Ga0207677_10074686
217 Ga0207639_10011894
218 Ga0207678_10090635
219 Ga0207708_10011160
220 Ga0207641_10062823
221 Ga0207648_10006653
222 Ga0207683_10243597
223 Ga0207428_10018363
224 Ga0268266_10003000
225 Ga0265322_10004787
226 Ga0307518_10093980
227 Ga0307410_10009901
228 Ga0307406_10024518
229 Ga0307412_10071109
230 Ga0307416_100027487
231 Ga0307411_10026385
232 Ga0307411_10042045
233 Ga0307415_100001386
234 Ga0316593_10002703
235 Ga0316593_10006641
236 Ga0373940_0000235
237 Ga0373932_0000115
238 Ga0373942_0007604
239 Ga0373937_0307003
240 Ga0395905_0100443
241 Ga0436364_1484048
242 Ga0395901_0508335
243 Ga0400484_17279
244 Ga0400490_32015
245 Ga0400488_23563
246 Ga0400489_14926
247 Ga0451797_1107812
248 Ga0453683_0005701
249 Ga0466963_0046078
250 Ga0466968_0079334
251 Ga0495580_0017529
252 Ga0495664_0006853
253 Ga0495594_0088095
254 Ga0495618_0018370
255 Ga0495620_0098602
256 Ga0495645_0030057
257 Ga0495667_0031443
258 Ga0496112_0327999
259 Ga0496115_0066026
260 Ga0496117_0000061
261 Ga0496119_0020051
262 Ga0496120_0004042
263 Ga0496122_0002352
264 Ga0496123_0004086
265 Ga0496126_0029564
266 Ga0501031_0003982
267 Ga0501031_0030720
268 Ga0501032_0030535
269 Ga0501033_0027462
270 Ga0501036_0000471
271 Ga0501036_0000765
272 Ga0501037_0014388
273 Ga0501037_0072089
274 Ga0501038_0020464
275 Ga0501038_0053942
276 Ga0501038_0055391
277 Ga0501039_0004114
278 Ga0501039_0014073
279 Ga0501039_0014292
280 Ga0501040_0000440
281 Ga0501040_0001402
282 Ga0501040_0003960
283 Ga0501041_0000162
284 Ga0501041_0000317
285 Ga0501042_0000072
286 Ga0501042_0000877
287 Ga0501042_0001511
288 Ga0501046_0000378
289 Ga0501046_0001113
290 Ga0501046_0124563
291 Ga0501046_0234422
292 Ga0501047_0022354
293 Ga0501048_0000265
294 Ga0501048_0006541
295 Ga0501048_0037363
296 Ga0501068_0003040
297 Ga0501068_0087345
298 Ga0501069_0036968
299 Ga0501069_0064077
300 Ga0501071_0000049
301 Ga0501071_0004411
302 Ga0501071_0012729
303 Ga0501072_0001793
304 Ga0501072_0006773
305 Ga0501072_0018566
306 Ga0501072_0117381
307 Ga0501074_0009671
308 Ga0501075_0000620
309 Ga0501075_0000738
310 Ga0501075_0082705
311 Ga0501076_0002925
312 Ga0501076_0016096
313 Ga0501077_0001131
314 Ga0501077_0005694
315 Ga0501077_0031446
316 Ga0501077_0040574
317 Ga0501079_0000457
318 Ga0501079_0011155
319 Ga0501080_0051467
320 Ga0501081_0001775
321 Ga0501081_0014881
322 Ga0501083_0008176
323 Ga0501035_0018040
324 Ga0501035_0069719
325 Ga0501044_0057476
326 Ga0501045_0000181
327 Ga0501045_0000262
328 Ga0501045_0000608
329 Ga0501045_0059210
330 nmdc:mga05p37_7261_c1
331 nmdc:mga09592_248986_c1
332 nmdc:mga08y16_267208_c1
333 nmdc:mga08y16_50410_c1
334 nmdc:mga0a205_58469_c1
335 Ga0501084_0000825
336 Ga0501084_0001729
337 Ga0501084_0024033
338 Ga0501082_0000871
339 Ga0501082_0000877
340 Ga0530510_0010945
341 2644279036
342 2758227040
343 2774383117
344 2812363115
345 2832005044
346 2857464228
347 2857732006
348 2857736679
349 2866070908
350 2928124132
351 8016256581
352 8025482438

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00463

ICL

Isocitrate lyase family

26

284

0.93

PF00463

ICL

Isocitrate lyase family

281

458

0.89

PF13714

PEP_mutase

Phosphoenolpyruvate phosphomutase

93

335

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3eol-assembly1.cif.gz_B-2 2.0a crystal structure of isocitrate lyase from brucella melitensis (p43212) 0.9892 4 405
3e5b-assembly1.cif.gz_D 2.4 a crystal structure of isocitrate lyase from brucella melitensis 0.9887 4 406
3e5b-assembly1.cif.gz_C 2.4 a crystal structure of isocitrate lyase from brucella melitensis 0.9875 3 406
3eol-assembly1.cif.gz_A-2 2.0a crystal structure of isocitrate lyase from brucella melitensis (p43212) 0.9825 4 406
3e5b-assembly1.cif.gz_D 2.4 a crystal structure of isocitrate lyase from brucella melitensis 0.9813 4 406
ID Description Score Start End Superfamily
3eolB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9892 4 405 3.20.20.60
3eolB00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9811 4 405 3.20.20.60
af_Q558S7_14_442_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9422 2 424 3.20.20.60
af_O07717_11_147_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9367 244 336 3.90.180.10
af_Q59RB8_16_527_3.20.20.60 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Phosphoenolpyruvate-binding domains 0.9292 1 408 3.20.20.60
ID Description Score Start End GO Terms
AF-A0A4R9R5H2-F1-model_v4 deleted 0.997 199 291
AF-A0A3D3D471-F1-model_v4 deleted 0.9927 193 310
AF-A0A527XB48-F1-model_v4 Isocitrate lyase (Isocitrase) (Isocitratase) 0.9916 221 286 GO:0004451
GO:0019752
AF-A0A529NAQ7-F1-model_v4 Isocitrate lyase (Isocitrase) (Isocitratase) 0.9912 193 348 GO:0004451
GO:0019752
AF-A0A4R9PNV0-F1-model_v4 Isocitrate lyase (Isocitrase) (Isocitratase) 0.9853 231 343 GO:0004451
GO:0019752

Map