F254674

General Info

Members Datasets Scaffolds Average Seq Length
169 117 338 442

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10188135|Ga0105248_101881351
Length 463
Sequence VAGGPGGLAMTTAAQAPTFPAEVVRWREQFESFRAGLPEAEPEWLRTLRSTGIGAFEELGFPTTRLEDWRHTSVAPIARTEFLRPPASATVADLAVLDTIDFGHAFARRQLVFVNGRYAPDLSSAGTTDGLHVRSLREVLDREPQLVHPYLDRQASGPGRPFAALNAAFLSDGAFISVPEGSVLTEPIHVVFLSAPGSQPTASHPRVLVWAGRKSQAAIIESYGGTSDAVYLTNAVTEITLEDGAVIDHYRLQRESARAFHVGTLCATQGRASRFASHAVSLGASLSRVDIRQVFAGEGGECVLNGLFLGSDRQHTDTHTWVDHAQPHCTTRELYKGIVDDKARGVFVGRILVRPGAQKTDAIQSNKNLILSREALVDSLPQLEILADDVKCKHGSTTGQLDPLALFYLRSRGIGEEAARALLTYAFASDVVQRIGIEALRTGLTEHLQRRLPGPADMKEAAV

Samples

Sample ID Description Type Environment
1 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
5 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
6 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
9 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
10 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
11 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
12 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
13 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
14 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
15 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
18 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
19 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
23 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
24 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
27 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
28 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
29 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
33 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
35 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
36 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
42 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
43 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
44 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
59 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
60 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
61 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
65 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
66 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
67 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
68 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
69 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
70 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
71 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
72 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
73 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
74 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
75 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
76 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
77 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
78 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
79 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
80 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
85 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
86 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
87 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
88 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
89 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
90 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
93 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
94 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
97 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
98 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
99 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
100 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
103 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
104 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
105 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
106 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
107 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
108 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
109 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
110 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
111 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
112 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
113 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
114 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
115 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
116 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
117 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.92
Nodule 0
Rhizoplane 0
Rhizosphere 94.08
Stem 0
Stem Tuber 0
Unclassified 1.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105248_10188135 3300009177 Bacteria 2326
2 Ga0065707_10133772 3300005295 Bacteria 1876
3 Ga0068869_100033376 3300005334 Bacteria 3633
4 Ga0070713_100209990 3300005436 Bacteria 1762
5 Ga0070713_100244969 3300005436 Bacteria 1633
6 Ga0070701_10023273 3300005438 Bacteria 2981
7 Ga0070700_100088163 3300005441 Bacteria 2019
8 Ga0070708_100031386 3300005445 Bacteria 4598
9 Ga0070708_100238037 3300005445 Bacteria 1709
10 Ga0070681_10007972 3300005458 Bacteria 10365
11 Ga0070681_10306550 3300005458 Unclassified 1497
12 Ga0068867_100017257 3300005459 Bacteria 5126
13 Ga0070706_100049648 3300005467 Bacteria 3871
14 Ga0070706_100113742 3300005467 Bacteria 2520
15 Ga0070706_100176079 3300005467 Bacteria 1997
16 Ga0070707_100173651 3300005468 Bacteria 2100
17 Ga0070698_100019646 3300005471 Bacteria 7087
18 Ga0070698_100033062 3300005471 Bacteria 5358
19 Ga0070698_100058722 3300005471 Bacteria 3889
20 Ga0070698_100308075 3300005471 Bacteria 1514
21 Ga0070699_100193111 3300005518 Bacteria 1809
22 Ga0070697_100296051 3300005536 Bacteria 1391
23 Ga0070672_100062703 3300005543 Bacteria 2934
24 Ga0068859_100090691 3300005617 Bacteria 3107
25 Ga0068870_10029853 3300005840 Bacteria 2751
26 Ga0068858_100064643 3300005842 Bacteria 3386
27 Ga0068862_100063616 3300005844 Bacteria 3174
28 Ga0075363_100018420 3300006048 Bacteria 3479
29 Ga0075364_10065549 3300006051 Bacteria 2384
30 Ga0075362_10009491 3300006177 Bacteria 3765
31 Ga0075367_10009435 3300006178 Bacteria 5100
32 Ga0075366_10000927 3300006195 Bacteria 14230
33 Ga0075428_100031886 3300006844 Bacteria 5822
34 Ga0075428_100083385 3300006844 Bacteria 3488
35 Ga0075428_100229848 3300006844 Bacteria 2002
36 Ga0075430_100025138 3300006846 Bacteria 5065
37 Ga0075431_100034776 3300006847 Bacteria 5190
38 Ga0075431_100058702 3300006847 Bacteria 3971
39 Ga0075431_100173702 3300006847 Bacteria 2214
40 Ga0075431_100337841 3300006847 Bacteria 1516
41 Ga0075433_10020935 3300006852 Bacteria 5477
42 Ga0075433_10089229 3300006852 Bacteria 2725
43 Ga0075433_10191422 3300006852 Bacteria 1820
44 Ga0075434_100010816 3300006871 Bacteria 8573
45 Ga0075429_100013186 3300006880 Bacteria 7171
46 Ga0068865_100049077 3300006881 Bacteria 2907
47 Ga0068865_100152600 3300006881 Bacteria 1754
48 Ga0075436_100010431 3300006914 Bacteria 6368
49 Ga0075436_100036028 3300006914 Bacteria 3413
50 Ga0097620_100090693 3300006931 Bacteria 3107
51 Ga0075435_100000304 3300007076 Bacteria 30337
52 Ga0099794_10055432 3300007265 Bacteria 1916
53 Ga0099795_10013158 3300007788 Bacteria 2532
54 Ga0111539_10001291 3300009094 Bacteria 33417
55 Ga0111539_10035291 3300009094 Bacteria 6056
56 Ga0111539_10104215 3300009094 Bacteria 3328
57 Ga0114129_10062193 3300009147 Bacteria 5216
58 Ga0114129_10081393 3300009147 Bacteria 4501
59 Ga0114129_10219983 3300009147 Bacteria 2562
60 Ga0114129_10258073 3300009147 Bacteria 2337
61 Ga0114129_10258942 3300009147 Bacteria 2333
62 Ga0114129_10327079 3300009147 Bacteria 2036
63 Ga0105242_10059620 3300009176 Bacteria 3132
64 Ga0157375_10119417 3300013308 Bacteria 2744
65 Ga0182008_10085013 3300014497 Bacteria 1558
66 Ga0157379_10265683 3300014968 Bacteria 1560
67 Ga0209675_1004076 3300025291 Bacteria 6654
68 Ga0207643_10045141 3300025908 Bacteria 2488
69 Ga0207684_10146323 3300025910 Bacteria 2032
70 Ga0207707_10010802 3300025912 Bacteria 7935
71 Ga0207707_10262972 3300025912 Unclassified 1497
72 Ga0207652_10082814 3300025921 Bacteria 2808
73 Ga0207646_10014891 3300025922 Bacteria 7367
74 Ga0207646_10281737 3300025922 Bacteria 1502
75 Ga0207659_10107404 3300025926 Bacteria 2115
76 Ga0207709_10067920 3300025935 Bacteria 2251
77 Ga0207691_10001781 3300025940 Bacteria 21186
78 Ga0207689_10068590 3300025942 Bacteria 2914
79 Ga0207651_10047650 3300025960 Bacteria 2892
80 Ga0207677_10062048 3300026023 Bacteria 2591
81 Ga0207708_10134548 3300026075 Bacteria 1935
82 Ga0207648_10007332 3300026089 Bacteria 10859
83 Ga0207675_100078914 3300026118 Bacteria 3085
84 Ga0210002_1005602 3300027617 Bacteria 1887
85 Ga0209974_10001329 3300027876 Bacteria 8888
86 Ga0207428_10000343 3300027907 Bacteria 60532
87 Ga0207428_10207018 3300027907 Bacteria 1475
88 Ga0268266_10131707 3300028379 Unclassified 2237
89 Ga0268264_10041117 3300028381 Bacteria 3822
90 Ga0265338_10040929 3300028800 Bacteria 4343
91 Ga0265327_10000326 3300031251 Bacteria 90862
92 Ga0265327_10000984 3300031251 Bacteria 40558
93 Ga0265327_10007994 3300031251 Bacteria 7995
94 Ga0265327_10015567 3300031251 Bacteria 4897
95 Ga0265327_10065159 3300031251 Bacteria 1844
96 Ga0265316_10002735 3300031344 Bacteria 18090
97 Ga0316575_10017510 3300031665 Bacteria 2722
98 Ga0316576_10029896 3300031727 Bacteria 3854
99 Ga0316577_10009734 3300031733 Bacteria 5175
100 Ga0316577_10036567 3300031733 Bacteria 2746
101 Ga0373946_0052856 3300035171 Bacteria 1705
102 Ga0373955_0029643 3300035172 Bacteria 2848
103 Ga0316574_0009980 3300035398 Bacteria 5343
104 Ga0316574_0054678 3300035398 Bacteria 2494
105 Ga0373935_0013392 3300035692 Bacteria 4948
106 Ga0373927_0025215 3300035695 Bacteria 3886
107 Ga0373947_0024110 3300035725 Bacteria 3543
108 Ga0316582_0003391 3300036647 Bacteria 7808
109 Ga0316582_0009098 3300036647 Bacteria 5375
110 Ga0316582_0077708 3300036647 Bacteria 2161
111 Ga0316584_0066814 3300036712 Bacteria 2694
112 Ga0395899_0045896 3300037312 Bacteria 3255
113 Ga0395898_0024498 3300037466 Bacteria 6087
114 Ga0395905_0124785 3300037471 Bacteria 2421
115 Ga0395901_0016636 3300038443 Bacteria 7493
116 Ga0395901_0308633 3300038443 Bacteria 1639
117 Ga0451577_0002061 3300042876 Bacteria 24813
118 Ga0451577_0004827 3300042876 Bacteria 14079
119 Ga0453683_0004121 3300044673 Bacteria 10442
120 Ga0453684_0000137 3300044712 Bacteria 323390
121 Ga0453684_0014493 3300044712 Bacteria 12598
122 Ga0495630_0044206 3300046517 Bacteria 3328
123 Ga0495668_0001556 3300046616 Bacteria 21755
124 Ga0495588_0028539 3300046674 Bacteria 2793
125 Ga0495636_0017120 3300047318 Bacteria 2900
126 Ga0495636_0065184 3300047318 Bacteria 1547
127 Ga0495672_0006214 3300047320 Bacteria 9313
128 Ga0501033_0057215 3300049570 Bacteria 2883
129 Ga0501039_0001833 3300049575 Bacteria 15713
130 Ga0501040_0013971 3300049576 Bacteria 5286
131 Ga0501041_0060643 3300049577 Bacteria 2315
132 Ga0501042_0000824 3300049578 Bacteria 17198
133 Ga0501046_0000816 3300049580 Bacteria 30371
134 Ga0501046_0088346 3300049580 Bacteria 2387
135 Ga0501048_0014816 3300049582 Bacteria 5767
136 Ga0501072_0001430 3300049588 Bacteria 17883
137 Ga0501072_0051775 3300049588 Bacteria 3233
138 Ga0501072_0093114 3300049588 Bacteria 2394
139 Ga0501075_0000077 3300049591 Bacteria 44211
140 Ga0501075_0021355 3300049591 Bacteria 4717
141 Ga0501079_0001078 3300049741 Bacteria 18966
142 Ga0501083_0051092 3300049744 Bacteria 2781
143 Ga0501035_0000116 3300049822 Bacteria 98094
144 Ga0501035_0045338 3300049822 Bacteria 3956
145 Ga0501044_0105221 3300049823 Bacteria 2835
146 Ga0501045_0009739 3300049824 Bacteria 6722
147 nmdc:mga0yw44_13941_c1 3300050492 Bacteria 4250
148 nmdc:mga0k408_1525_c1 3300050493 Bacteria 12510
149 nmdc:mga06z11_7764_c1 3300050494 Bacteria 4433
150 nmdc:mga05p37_14380_c1 3300050507 Bacteria 9503
151 nmdc:mga05p37_20802_c1 3300050507 Bacteria 7941
152 nmdc:mga05p37_215495_c1 3300050507 Bacteria 2319
153 nmdc:mga09592_159081_c1 3300050508 Bacteria 1951
154 nmdc:mga09592_3647_c1 3300050508 Bacteria 12411
155 nmdc:mga0qj67_182611_c1 3300050509 Bacteria 1704
156 nmdc:mga06r32_1373_c1 3300050510 Bacteria 21995
157 nmdc:mga08y16_125407_c1 3300050511 Bacteria 2671
158 nmdc:mga08y16_44993_c1 3300050511 Bacteria 4625
159 nmdc:mga08y16_5129_c1 3300050511 Bacteria 13690
160 nmdc:mga08y16_7040_c1 3300050511 Bacteria 11802
161 nmdc:mga0rr50_195150_c1 3300050513 Bacteria 1661
162 nmdc:mga08x19_30557_c1 3300050514 Bacteria 3385
163 nmdc:mga0a205_205_c1 3300050515 Bacteria 41396
164 nmdc:mga0a205_233252_c1 3300050515 Bacteria 1723
165 Ga0500604_0013907 3300053151 Bacteria 2186
166 Ga0501084_0023006 3300054114 Bacteria 5202
167 Ga0501082_0001270 3300060353 Bacteria 22170
168 Ga0501082_0039410 3300060353 Bacteria 4075
169 Ga0530510_0001174 3300061734 Bacteria 17418
170 Ga0105248_10188135
171 Ga0065707_10133772
172 Ga0068869_100033376
173 Ga0070713_100209990
174 Ga0070713_100244969
175 Ga0070701_10023273
176 Ga0070700_100088163
177 Ga0070708_100031386
178 Ga0070708_100238037
179 Ga0070681_10007972
180 Ga0070681_10306550
181 Ga0068867_100017257
182 Ga0070706_100049648
183 Ga0070706_100113742
184 Ga0070706_100176079
185 Ga0070707_100173651
186 Ga0070698_100019646
187 Ga0070698_100033062
188 Ga0070698_100058722
189 Ga0070698_100308075
190 Ga0070699_100193111
191 Ga0070697_100296051
192 Ga0070672_100062703
193 Ga0068859_100090691
194 Ga0068870_10029853
195 Ga0068858_100064643
196 Ga0068862_100063616
197 Ga0075363_100018420
198 Ga0075364_10065549
199 Ga0075362_10009491
200 Ga0075367_10009435
201 Ga0075366_10000927
202 Ga0075428_100031886
203 Ga0075428_100083385
204 Ga0075428_100229848
205 Ga0075430_100025138
206 Ga0075431_100034776
207 Ga0075431_100058702
208 Ga0075431_100173702
209 Ga0075431_100337841
210 Ga0075433_10020935
211 Ga0075433_10089229
212 Ga0075433_10191422
213 Ga0075434_100010816
214 Ga0075429_100013186
215 Ga0068865_100049077
216 Ga0068865_100152600
217 Ga0075436_100010431
218 Ga0075436_100036028
219 Ga0097620_100090693
220 Ga0075435_100000304
221 Ga0099794_10055432
222 Ga0099795_10013158
223 Ga0111539_10001291
224 Ga0111539_10035291
225 Ga0111539_10104215
226 Ga0114129_10062193
227 Ga0114129_10081393
228 Ga0114129_10219983
229 Ga0114129_10258073
230 Ga0114129_10258942
231 Ga0114129_10327079
232 Ga0105242_10059620
233 Ga0157375_10119417
234 Ga0182008_10085013
235 Ga0157379_10265683
236 Ga0209675_1004076
237 Ga0207643_10045141
238 Ga0207684_10146323
239 Ga0207707_10010802
240 Ga0207707_10262972
241 Ga0207652_10082814
242 Ga0207646_10014891
243 Ga0207646_10281737
244 Ga0207659_10107404
245 Ga0207709_10067920
246 Ga0207691_10001781
247 Ga0207689_10068590
248 Ga0207651_10047650
249 Ga0207677_10062048
250 Ga0207708_10134548
251 Ga0207648_10007332
252 Ga0207675_100078914
253 Ga0210002_1005602
254 Ga0209974_10001329
255 Ga0207428_10000343
256 Ga0207428_10207018
257 Ga0268266_10131707
258 Ga0268264_10041117
259 Ga0265338_10040929
260 Ga0265327_10000326
261 Ga0265327_10000984
262 Ga0265327_10007994
263 Ga0265327_10015567
264 Ga0265327_10065159
265 Ga0265316_10002735
266 Ga0316575_10017510
267 Ga0316576_10029896
268 Ga0316577_10009734
269 Ga0316577_10036567
270 Ga0373946_0052856
271 Ga0373955_0029643
272 Ga0316574_0009980
273 Ga0316574_0054678
274 Ga0373935_0013392
275 Ga0373927_0025215
276 Ga0373947_0024110
277 Ga0316582_0003391
278 Ga0316582_0009098
279 Ga0316582_0077708
280 Ga0316584_0066814
281 Ga0395899_0045896
282 Ga0395898_0024498
283 Ga0395905_0124785
284 Ga0395901_0016636
285 Ga0395901_0308633
286 Ga0451577_0002061
287 Ga0451577_0004827
288 Ga0453683_0004121
289 Ga0453684_0000137
290 Ga0453684_0014493
291 Ga0495630_0044206
292 Ga0495668_0001556
293 Ga0495588_0028539
294 Ga0495636_0017120
295 Ga0495636_0065184
296 Ga0495672_0006214
297 Ga0501033_0057215
298 Ga0501039_0001833
299 Ga0501040_0013971
300 Ga0501041_0060643
301 Ga0501042_0000824
302 Ga0501046_0000816
303 Ga0501046_0088346
304 Ga0501048_0014816
305 Ga0501072_0001430
306 Ga0501072_0051775
307 Ga0501072_0093114
308 Ga0501075_0000077
309 Ga0501075_0021355
310 Ga0501079_0001078
311 Ga0501083_0051092
312 Ga0501035_0000116
313 Ga0501035_0045338
314 Ga0501044_0105221
315 Ga0501045_0009739
316 nmdc:mga0yw44_13941_c1
317 nmdc:mga0k408_1525_c1
318 nmdc:mga06z11_7764_c1
319 nmdc:mga05p37_14380_c1
320 nmdc:mga05p37_20802_c1
321 nmdc:mga05p37_215495_c1
322 nmdc:mga09592_159081_c1
323 nmdc:mga09592_3647_c1
324 nmdc:mga0qj67_182611_c1
325 nmdc:mga06r32_1373_c1
326 nmdc:mga08y16_125407_c1
327 nmdc:mga08y16_44993_c1
328 nmdc:mga08y16_5129_c1
329 nmdc:mga08y16_7040_c1
330 nmdc:mga0rr50_195150_c1
331 nmdc:mga08x19_30557_c1
332 nmdc:mga0a205_205_c1
333 nmdc:mga0a205_233252_c1
334 Ga0500604_0013907
335 Ga0501084_0023006
336 Ga0501082_0001270
337 Ga0501082_0039410
338 Ga0530510_0001174

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01458

SUFBD

SUF system FeS cluster assembly, SufBD

202

427

0.99

PF19295

SufBD_N

SufBD protein N-terminal region

24

190

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
5awf-assembly1.cif.gz_B crystal structure of sufb-sufc-sufd complex from escherichia coli 0.8147 6 405
5awg-assembly2.cif.gz_F crystal structure of hg-bound sufb-sufc-sufd complex from escherichia coli 0.8017 75 404
5awf-assembly1.cif.gz_B crystal structure of sufb-sufc-sufd complex from escherichia coli 0.7913 6 405
5awg-assembly2.cif.gz_F crystal structure of hg-bound sufb-sufc-sufd complex from escherichia coli 0.7492 75 404
4dn7-assembly1.cif.gz_B crystal structure of putative abc transporter, atp-binding protein from methanosarcina mazei go1 0.7193 26 407
ID Description Score Start End Superfamily
af_E2RYF7_161_246_2.160.10.10 Mainly Beta;3 Solenoid;UDP N-Acetylglucosamine Acyltransferase; domain 1;Hexapeptide repeat proteins 0.4751 255 356 2.160.10.10
af_E2RYF7_161_246_2.160.10.10 Mainly Beta;3 Solenoid;UDP N-Acetylglucosamine Acyltransferase; domain 1;Hexapeptide repeat proteins 0.4538 255 356 2.160.10.10
af_A0A1P8BCW1_1_144_3.80.20.20 Alpha Beta;Alpha-Beta Horseshoe;24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A;Receptor L-domain 0.4296 165 356 3.80.20.20
af_A0A1P8BCW1_1_144_3.80.20.20 Alpha Beta;Alpha-Beta Horseshoe;24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A;Receptor L-domain 0.4266 165 356 3.80.20.20
af_Q7TQF2_412_577_2.160.20.10 Mainly Beta;3 Solenoid;Pectate Lyase C-like;Single-stranded right-handed beta-helix, Pectin lyase-like 0.3446 160 341 2.160.20.10
ID Description Score Start End GO Terms
AF-A0A1F7U3W1-F1-model_v4 SUF system FeS cluster assembly SufBD core domain-containing protein 0.9416 158 412 GO:0016226
AF-A0A529U770-F1-model_v4 deleted 0.9346 175 408
AF-A0A537R2D1-F1-model_v4 Fe-S cluster assembly protein SufD 0.9335 158 408 GO:0016226
AF-A0A382YCZ8-F1-model_v4 SUF system FeS cluster assembly SufBD core domain-containing protein 0.9302 158 407 GO:0016226
AF-A0A2V7LD03-F1-model_v4 Fe-S cluster assembly protein SufD 0.9261 155 407 GO:0016226

Map