F253879

General Info

Members Datasets Scaffolds Average Seq Length
169 136 134 83

Family's Representative Sequence

Representative Sequence 3300003323|rootH1_10251271|rootH1_102512712
Length 84
Sequence MTERSPKRSFATRPADPESWIKASDAPSARGAADGGYTARLTIDVAPDLRGRIKIAAFQRGVTVADMLRELLAREFPNTEGDPS

Samples

Sample ID Description Type Environment
1 2513237088 Rhizobium mesoamericanum STM6155 Isolate Nodule
2 2515154112 Bradyrhizobium sp. WSM4349 Isolate Nodule
3 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
4 2643221558 Rhizobium sp. Root149 Isolate Unclassified
5 2643221568 Rhizobium sp. Root564 Isolate Unclassified
6 2824746037 Bradyrhizobium sp. HAMBI 2299 Isolate Unclassified
7 2841941048 Bradyrhizobium sp. SBR1B Isolate Nodule
8 2841949485 Bradyrhizobium sp. ERR14 Isolate Nodule
9 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
10 2842694124 Methylopila sp. R-72369 Isolate Unclassified
11 2854911287 Brucella lupini LUP21 Isolate Unclassified
12 2888337043 Mesorhizobium sp. M8A.F.Ca.ET.057.01.1.1 Isolate Nodule
13 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
14 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
15 2896384573 Ensifer sp. MPMI2T Isolate Unclassified
16 2904690495 Bradyrhizobium ivorense CI-1B Isolate Nodule
17 2908775508 Bradyrhizobium sp. SUTN9-2 Isolate Unclassified
18 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
19 2935703347 Bradyrhizobium sp. LA6.10 Isolate Nodule
20 2935769743 Bradyrhizobium sp. LB12.1 Isolate Nodule
21 2935785616 Bradyrhizobium sp. LB5.2 Isolate Nodule
22 2935793552 Bradyrhizobium sp. LB8.2 Isolate Nodule
23 2935992306 Bradyrhizobium sp. I1.7.5 Isolate Nodule
24 2936055302 Bradyrhizobium sp. JR4.1 Isolate Nodule
25 2941531003 Bradyrhizobium sp. LB11.1 Isolate Nodule
26 2958092219 Mesorhizobium sp. M8A.F.Ca.ET.059.01.1.1 Isolate Nodule
27 2964628898 Sinorhizobium meliloti USDA1191 Isolate Nodule
28 2996348954 Mesorhizobium sp. M8A.F.Ca.ET.167.01.1.1 Isolate Nodule
29 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
30 3004275668 Mesorhizobium sp. M8A.F.Ca.ET.208.01.1.1 Isolate Nodule
31 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
32 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
33 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
37 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
38 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006943 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW Metagenome Nodule
42 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
46 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
47 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
48 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
49 3300021320 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS3 Metagenome Nodule
50 3300021321 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS1 Metagenome Nodule
51 3300021324 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS4 Metagenome Nodule
52 3300021327 Root nodule microbial communities from cowpea collected in UCLA plant growth center, Los Angeles, California, USA - CNSS2 Metagenome Nodule
53 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
56 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300027357 Root nodule microbial communities of legume samples collected from California USA - Cow pea white BW (SPAdes) (version 2) Metagenome Nodule
64 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
65 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
66 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031967 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - elongated nodules Metagenome Nodule
69 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
70 3300033430 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - small nodules Metagenome Nodule
71 3300033464 Medicago polymorpha root nodule microbial communities from Los Angeles, California, United States - branched nodules Metagenome Nodule
72 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
73 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
74 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
77 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
78 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
79 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
80 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
81 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
82 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
83 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
84 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
85 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
86 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
87 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
88 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
89 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
90 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
91 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
92 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
93 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
94 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
95 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
96 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
97 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
98 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
99 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
100 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
101 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
102 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
103 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
104 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
105 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
106 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
107 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
108 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
110 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
111 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
112 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
113 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
114 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
115 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
116 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
117 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
118 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
119 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
120 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
121 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
123 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
124 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
125 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
126 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
127 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
128 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
129 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
130 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
131 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
132 641228493 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
133 643348555 Gluconacetobacter diazotrophicus PA1 5 Isolate Unclassified
134 8019586578 Bradyrhizobium sp. i1.4.4 Isolate Nodule
135 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified
136 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 79.29
Metatranscriptomes 0
Isolates 20.71

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.83
Nodule 18.34
Rhizoplane 2.96
Rhizosphere 52.07
Stem 0
Stem Tuber 0
Unclassified 14.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24739J22299_10000327 3300001989 Bacteria 16282
2 rootH1_10251271 3300003323 Bacteria 1211
3 Ga0055532_1020699 3300003758 Bacteria 684
4 Ga0070681_11813305 3300005458 Bacteria 537
5 Ga0068855_100951302 3300005563 Bacteria 905
6 Ga0068851_10125963 3300005834 Bacteria 1381
7 Ga0075368_10000215 3300006042 Bacteria 16082
8 Ga0075363_100000149 3300006048 Bacteria 17334
9 Ga0075367_10000094 3300006178 Bacteria 24410
10 Ga0075370_10089457 3300006353 Bacteria 1775
11 Ga0099822_1026371 3300006943 Bacteria 4927
12 Ga0099826_10000056 3300006948 Bacteria 70004
13 Ga0105240_10000005 3300009093 Bacteria 702630
14 Ga0105240_10750317 3300009093 Bacteria 1061
15 Ga0105245_10075407 3300009098 Bacteria 3071
16 Ga0105248_10452404 3300009177 Bacteria 1447
17 Ga0105239_10117281 3300010375 Bacteria 2955
18 Ga0157370_10000163 3300013104 Bacteria 81428
19 Ga0183365_10002 3300015684 Bacteria 545891
20 Ga0214544_1007116 3300021320 Bacteria 19975
21 Ga0214542_1007023 3300021321 Bacteria 19963
22 Ga0214545_1006664 3300021324 Bacteria 19963
23 Ga0214543_1004668 3300021327 Bacteria 25808
24 Ga0209147_100635 3300025229 Bacteria 18852
25 Ga0209147_102943 3300025229 Bacteria 3692
26 Ga0209455_1040481 3300025272 Bacteria 712
27 Ga0209025_1131292 3300025294 Bacteria 727
28 Ga0209051_1075759 3300025303 Bacteria 992
29 Ga0207695_10000011 3300025913 Bacteria 910221
30 Ga0207695_10488487 3300025913 Bacteria 1113
31 Ga0207664_11344921 3300025929 Bacteria 634
32 Ga0207691_10138279 3300025940 Bacteria 2147
33 Ga0207711_10325485 3300025941 Bacteria 1421
34 Ga0207668_10000069 3300025972 Bacteria 79827
35 Ga0207674_11232667 3300026116 Bacteria 718
36 Ga0209589_1000175 3300027357 Bacteria 73346
37 Ga0209282_1000084 3300027666 Bacteria 70012
38 Ga0209813_10000083 3300027866 Bacteria 34743
39 Ga0268266_11287000 3300028379 Bacteria 706
40 Ga0307513_10034728 3300031456 Bacteria 5653
41 Ga0315914_1000129 3300031967 Bacteria 70013
42 Ga0307416_100583171 3300032002 Bacteria 1196
43 Ga0315913_1000034 3300033430 Bacteria 70013
44 Ga0315915_1000066 3300033464 Bacteria 70010
45 Ga0395898_0387556 3300037466 Bacteria 1333
46 Ga0395901_0804985 3300038443 Bacteria 928
47 Ga0466960_0954039 3300044901 Bacteria 525
48 Ga0451576_0007330 3300045051 Bacteria 13238
49 Ga0495638_0000029 3300046460 Bacteria 330201
50 Ga0495610_0272001 3300046512 Bacteria 663
51 Ga0495643_0000007 3300046522 Bacteria 383435
52 Ga0495648_0000691 3300046524 Bacteria 36002
53 Ga0495648_0001199 3300046524 Bacteria 25964
54 Ga0495633_0000218 3300046558 Bacteria 71266
55 Ga0495611_0017715 3300046648 Bacteria 3050
56 Ga0495625_0002308 3300046660 Bacteria 20866
57 Ga0495613_0048100 3300046689 Bacteria 3150
58 Ga0495670_0001510 3300046691 Bacteria 11351
59 Ga0495671_0000071 3300046692 Bacteria 97337
60 Ga0495660_0086502 3300046810 Bacteria 1636
61 Ga0495687_000136 3300047443 Bacteria 113298
62 Ga0495681_0350775 3300047470 Bacteria 561
63 Ga0495686_0112353 3300047472 Bacteria 1632
64 Ga0496104_0012827 3300048907 Bacteria 7547
65 Ga0496105_0001583 3300048908 Bacteria 16131
66 Ga0496113_0249429 3300048916 Bacteria 1417
67 Ga0496114_1176909 3300048917 Bacteria 652
68 Ga0496115_0280506 3300048918 Bacteria 1368
69 Ga0496116_0049519 3300048919 Bacteria 2809
70 Ga0496116_0179918 3300048919 Bacteria 1133
71 Ga0496117_0017206 3300048920 Bacteria 6050
72 Ga0496118_0008932 3300048921 Bacteria 10231
73 Ga0496119_0085409 3300048922 Bacteria 1807
74 Ga0496122_0000595 3300048925 Bacteria 74359
75 Ga0496123_0000211 3300048926 Bacteria 118697
76 Ga0496124_0008192 3300048927 Bacteria 10963
77 Ga0496125_0011173 3300048928 Bacteria 9001
78 Ga0495678_000310 3300049459 Bacteria 52412
79 Ga0501031_0005741 3300049568 Bacteria 8087
80 Ga0501032_0000653 3300049569 Bacteria 28159
81 Ga0501032_0591854 3300049569 Bacteria 706
82 Ga0501032_0811279 3300049569 Bacteria 591
83 Ga0501033_0000284 3300049570 Bacteria 48783
84 Ga0501033_0005995 3300049570 Bacteria 9535
85 Ga0501033_0028253 3300049570 Bacteria 4215
86 Ga0501033_0432679 3300049570 Bacteria 915
87 Ga0501033_0529389 3300049570 Bacteria 813
88 Ga0501034_0000094 3300049571 Bacteria 163124
89 Ga0501034_0000775 3300049571 Bacteria 47800
90 Ga0501034_0003516 3300049571 Bacteria 17782
91 Ga0501034_0019144 3300049571 Bacteria 7009
92 Ga0501034_0400997 3300049571 Bacteria 1294
93 Ga0501034_0737596 3300049571 Bacteria 881
94 Ga0501036_0001342 3300049572 Bacteria 18915
95 Ga0501036_0604574 3300049572 Bacteria 909
96 Ga0501037_0000057 3300049573 Bacteria 107920
97 Ga0501037_1094571 3300049573 Bacteria 516
98 Ga0501038_0000218 3300049574 Bacteria 49144
99 Ga0501038_0001795 3300049574 Bacteria 19890
100 Ga0501038_0719912 3300049574 Bacteria 746
101 Ga0501039_0000010 3300049575 Bacteria 247832
102 Ga0501039_0161573 3300049575 Bacteria 1761
103 Ga0501041_0340320 3300049577 Bacteria 947
104 Ga0501043_0000040 3300049579 Bacteria 117024
105 Ga0501043_0507978 3300049579 Bacteria 900
106 Ga0501046_0047087 3300049580 Bacteria 3420
107 Ga0501047_0630933 3300049581 Bacteria 892
108 Ga0501047_0673332 3300049581 Bacteria 853
109 Ga0501048_0407929 3300049582 Bacteria 972
110 Ga0501069_0931938 3300049585 Bacteria 529
111 Ga0501070_0328646 3300049586 Bacteria 1243
112 Ga0501071_0732254 3300049587 Bacteria 762
113 Ga0501223_015184 3300049663 Bacteria 1525
114 Ga0501035_0000353 3300049822 Bacteria 52827
115 Ga0501035_0001360 3300049822 Bacteria 25163
116 Ga0501035_0004392 3300049822 Bacteria 13382
117 Ga0501035_0088294 3300049822 Bacteria 2732
118 Ga0501035_0761318 3300049822 Bacteria 776
119 Ga0501044_0014782 3300049823 Bacteria 8415
120 Ga0501044_0702213 3300049823 Bacteria 897
121 Ga0501044_1184145 3300049823 Bacteria 632
122 Ga0501044_1566368 3300049823 Bacteria 524
123 Ga0501044_1573952 3300049823 Bacteria 522
124 Ga0501044_1603565 3300049823 Bacteria 516
125 Ga0501045_0190620 3300049824 Bacteria 1528
126 nmdc:mga03n38_16076_c1 3300050490 Bacteria 2904
127 nmdc:mga03n38_2399_c1 3300050490 Bacteria 5780
128 nmdc:mga06z11_9_c1 3300050494 Bacteria 109982
129 nmdc:mga04h51_12_c1 3300050495 Bacteria 83117
130 nmdc:mga07m45_94117_c2 3300050496 Bacteria 1219
131 Ga0500583_0000079 3300053092 Bacteria 57526
132 Ga0500652_235947 3300053131 Bacteria 730
133 Ga0500559_0001523 3300053136 Bacteria 12986
134 Ga0500636_0015719 3300053177 Bacteria 4462

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2964628898 2964629781 56
2 iso_pu_bacteria 2889914905 2889919611 58
3 iso_pu_bacteria 641228493 641333903 58
4 iso_pu_bacteria 643348555 643390554 58
5 3300046512 Ga0495610_0272001 Ga0495610_0272001_25_279 59
6 iso_pu_bacteria 2513237088 2513595446 59
7 iso_pu_bacteria 2515154112 2515630460 59
8 iso_pu_bacteria 2585427530 2585553476 59
9 iso_pu_bacteria 2643221558 2643813518 59
10 iso_pu_bacteria 2643221568 2643855161 59
11 iso_pu_bacteria 2824746037 2824749536 59
12 iso_pu_bacteria 2841941048 2841949094 59
13 iso_pu_bacteria 2841949485 2841957499 59
14 iso_pu_bacteria 2841974524 2841981388 59
15 iso_pu_bacteria 2842694124 2842694441 59
16 iso_pu_bacteria 2854911287 2854912867 59
17 iso_pu_bacteria 2888337043 2888339925 59
18 iso_pu_bacteria 2888378607 2888378972 59
19 iso_pu_bacteria 2896384573 2896385243 59
20 iso_pu_bacteria 2904690495 2904694717 59
21 iso_pu_bacteria 2908775508 2908775642 59
22 iso_pu_bacteria 2929199973 2929202875 59
23 iso_pu_bacteria 2935703347 2935708984 59
24 iso_pu_bacteria 2935769743 2935775744 59
25 iso_pu_bacteria 2935785616 2935792653 59
26 iso_pu_bacteria 2935793552 2935800667 59
27 iso_pu_bacteria 2935992306 2935998023 59
28 iso_pu_bacteria 2936055302 2936055770 59
29 iso_pu_bacteria 2941531003 2941537599 59
30 iso_pu_bacteria 2958092219 2958093375 59
31 iso_pu_bacteria 2996348954 2996350652 59
32 iso_pu_bacteria 3002141150 3002142823 59
33 iso_pu_bacteria 3004275668 3004277350 59
34 iso_pu_bacteria 8019586578 8019592626 59
35 iso_pu_bacteria 8055909800 8055912036 59
36 iso_pu_bacteria 8057529695 8057532642 59
37 3300026116 Ga0207674_11232667 Ga0207674_112326672 61
38 3300032002 Ga0307416_100583171 Ga0307416_1005831712 61
39 3300045051 Ga0451576_0007330 Ga0451576_0007330_4325_4576 61
40 3300015684 Ga0183365_10002 Ga0183365_10002135 62
41 3300048917 Ga0496114_1176909 Ga0496114_1176909_262_513 62
42 3300048918 Ga0496115_0280506 Ga0496115_0280506_140_391 62
43 3300049570 Ga0501033_0005995 Ga0501033_0005995_1687_1938 62
44 3300049570 Ga0501033_0028253 Ga0501033_0028253_2302_2553 62
45 3300049663 Ga0501223_015184 Ga0501223_015184_637_891 62
46 3300049822 Ga0501035_0001360 Ga0501035_0001360_21375_21626 62
47 3300049822 Ga0501035_0004392 Ga0501035_0004392_5287_5538 62
48 3300001989 JGI24739J22299_10000327 JGI24739J22299_1000032713 63
49 3300003323 rootH1_10251271 rootH1_102512712 63
50 3300003758 Ga0055532_1020699 Ga0055532_10206992 63
51 3300005458 Ga0070681_11813305 Ga0070681_118133051 63
52 3300005563 Ga0068855_100951302 Ga0068855_1009513022 63
53 3300005834 Ga0068851_10125963 Ga0068851_101259632 63
54 3300006042 Ga0075368_10000215 Ga0075368_1000021512 63
55 3300006048 Ga0075363_100000149 Ga0075363_1000001495 63
56 3300006178 Ga0075367_10000094 Ga0075367_1000009425 63
57 3300006353 Ga0075370_10089457 Ga0075370_100894572 63
58 3300006943 Ga0099822_1026371 Ga0099822_10263712 63
59 3300006948 Ga0099826_10000056 Ga0099826_1000005632 63
60 3300009093 Ga0105240_10000005 Ga0105240_10000005215 63
61 3300009093 Ga0105240_10750317 Ga0105240_107503172 63
62 3300009098 Ga0105245_10075407 Ga0105245_100754072 63
63 3300009177 Ga0105248_10452404 Ga0105248_104524043 63
64 3300010375 Ga0105239_10117281 Ga0105239_101172812 63
65 3300013104 Ga0157370_10000163 Ga0157370_1000016311 63
66 3300021320 Ga0214544_1007116 Ga0214544_100711611 63
67 3300021321 Ga0214542_1007023 Ga0214542_100702311 63
68 3300021324 Ga0214545_1006664 Ga0214545_100666411 63
69 3300021327 Ga0214543_1004668 Ga0214543_100466819 63
70 3300025229 Ga0209147_100635 Ga0209147_1006352 63
71 3300025229 Ga0209147_102943 Ga0209147_1029436 63
72 3300025272 Ga0209455_1040481 Ga0209455_10404812 63
73 3300025294 Ga0209025_1131292 Ga0209025_11312922 63
74 3300025303 Ga0209051_1075759 Ga0209051_10757591 63
75 3300025913 Ga0207695_10000011 Ga0207695_10000011698 63
76 3300025913 Ga0207695_10488487 Ga0207695_104884873 63
77 3300025929 Ga0207664_11344921 Ga0207664_113449212 63
78 3300025940 Ga0207691_10138279 Ga0207691_101382792 63
79 3300025941 Ga0207711_10325485 Ga0207711_103254852 63
80 3300025972 Ga0207668_10000069 Ga0207668_1000006939 63
81 3300027357 Ga0209589_1000175 Ga0209589_10001759 63
82 3300027666 Ga0209282_1000084 Ga0209282_100008434 63
83 3300027866 Ga0209813_10000083 Ga0209813_1000008324 63
84 3300028379 Ga0268266_11287000 Ga0268266_112870002 63
85 3300031456 Ga0307513_10034728 Ga0307513_100347283 63
86 3300031967 Ga0315914_1000129 Ga0315914_100012932 63
87 3300033430 Ga0315913_1000034 Ga0315913_100003434 63
88 3300033464 Ga0315915_1000066 Ga0315915_100006634 63
89 3300037466 Ga0395898_0387556 Ga0395898_0387556_372_626 63
90 3300038443 Ga0395901_0804985 Ga0395901_0804985_215_469 63
91 3300044901 Ga0466960_0954039 Ga0466960_0954039_80_334 63
92 3300046460 Ga0495638_0000029 Ga0495638_0000029_60942_61196 63
93 3300046522 Ga0495643_0000007 Ga0495643_0000007_214932_215186 63
94 3300046524 Ga0495648_0000691 Ga0495648_0000691_26639_26893 63
95 3300046524 Ga0495648_0001199 Ga0495648_0001199_19104_19358 63
96 3300046558 Ga0495633_0000218 Ga0495633_0000218_41548_41802 63
97 3300046648 Ga0495611_0017715 Ga0495611_0017715_350_604 63
98 3300046660 Ga0495625_0002308 Ga0495625_0002308_3863_4117 63
99 3300046689 Ga0495613_0048100 Ga0495613_0048100_1204_1458 63
100 3300046691 Ga0495670_0001510 Ga0495670_0001510_8259_8513 63
101 3300046692 Ga0495671_0000071 Ga0495671_0000071_49558_49812 63
102 3300046810 Ga0495660_0086502 Ga0495660_0086502_923_1177 63
103 3300047443 Ga0495687_000136 Ga0495687_000136_75738_75992 63
104 3300047470 Ga0495681_0350775 Ga0495681_0350775_62_301 63
105 3300047472 Ga0495686_0112353 Ga0495686_0112353_285_539 63
106 3300048907 Ga0496104_0012827 Ga0496104_0012827_3527_3781 63
107 3300048908 Ga0496105_0001583 Ga0496105_0001583_9994_10248 63
108 3300048916 Ga0496113_0249429 Ga0496113_0249429_904_1158 63
109 3300048919 Ga0496116_0049519 Ga0496116_0049519_599_853 63
110 3300048919 Ga0496116_0179918 Ga0496116_0179918_850_1104 63
111 3300048920 Ga0496117_0017206 Ga0496117_0017206_2490_2744 63
112 3300048921 Ga0496118_0008932 Ga0496118_0008932_3170_3424 63
113 3300048922 Ga0496119_0085409 Ga0496119_0085409_1481_1735 63
114 3300048925 Ga0496122_0000595 Ga0496122_0000595_35539_35793 63
115 3300048926 Ga0496123_0000211 Ga0496123_0000211_69566_69820 63
116 3300048927 Ga0496124_0008192 Ga0496124_0008192_3681_3935 63
117 3300048928 Ga0496125_0011173 Ga0496125_0011173_3757_4011 63
118 3300049459 Ga0495678_000310 Ga0495678_000310_13444_13698 63
119 3300049568 Ga0501031_0005741 Ga0501031_0005741_1471_1725 63
120 3300049569 Ga0501032_0000653 Ga0501032_0000653_8456_8710 63
121 3300049569 Ga0501032_0591854 Ga0501032_0591854_406_663 63
122 3300049569 Ga0501032_0811279 Ga0501032_0811279_244_498 63
123 3300049570 Ga0501033_0000284 Ga0501033_0000284_10137_10391 63
124 3300049570 Ga0501033_0432679 Ga0501033_0432679_116_370 63
125 3300049570 Ga0501033_0529389 Ga0501033_0529389_471_725 63
126 3300049571 Ga0501034_0000094 Ga0501034_0000094_86724_86978 63
127 3300049571 Ga0501034_0000775 Ga0501034_0000775_22066_22320 63
128 3300049571 Ga0501034_0003516 Ga0501034_0003516_11761_12018 63
129 3300049571 Ga0501034_0019144 Ga0501034_0019144_6605_6859 63
130 3300049571 Ga0501034_0400997 Ga0501034_0400997_266_520 63
131 3300049571 Ga0501034_0737596 Ga0501034_0737596_559_813 63
132 3300049572 Ga0501036_0001342 Ga0501036_0001342_5538_5792 63
133 3300049572 Ga0501036_0604574 Ga0501036_0604574_582_839 63
134 3300049573 Ga0501037_0000057 Ga0501037_0000057_25422_25676 63
135 3300049573 Ga0501037_1094571 Ga0501037_1094571_216_461 63
136 3300049574 Ga0501038_0000218 Ga0501038_0000218_19450_19704 63
137 3300049574 Ga0501038_0001795 Ga0501038_0001795_10381_10635 63
138 3300049574 Ga0501038_0719912 Ga0501038_0719912_472_726 63
139 3300049575 Ga0501039_0000010 Ga0501039_0000010_8444_8698 63
140 3300049575 Ga0501039_0161573 Ga0501039_0161573_406_663 63
141 3300049577 Ga0501041_0340320 Ga0501041_0340320_74_328 63
142 3300049579 Ga0501043_0000040 Ga0501043_0000040_97193_97447 63
143 3300049579 Ga0501043_0507978 Ga0501043_0507978_201_455 63
144 3300049580 Ga0501046_0047087 Ga0501046_0047087_2506_2760 63
145 3300049581 Ga0501047_0630933 Ga0501047_0630933_329_583 63
146 3300049581 Ga0501047_0673332 Ga0501047_0673332_341_595 63
147 3300049582 Ga0501048_0407929 Ga0501048_0407929_105_359 63
148 3300049585 Ga0501069_0931938 Ga0501069_0931938_22_276 63
149 3300049586 Ga0501070_0328646 Ga0501070_0328646_288_542 63
150 3300049587 Ga0501071_0732254 Ga0501071_0732254_73_327 63
151 3300049822 Ga0501035_0000353 Ga0501035_0000353_44096_44350 63
152 3300049822 Ga0501035_0088294 Ga0501035_0088294_223_477 63
153 3300049822 Ga0501035_0761318 Ga0501035_0761318_331_588 63
154 3300049823 Ga0501044_0014782 Ga0501044_0014782_5442_5696 63
155 3300049823 Ga0501044_0702213 Ga0501044_0702213_91_345 63
156 3300049823 Ga0501044_1184145 Ga0501044_1184145_120_374 63
157 3300049823 Ga0501044_1566368 Ga0501044_1566368_267_512 63
158 3300049823 Ga0501044_1573952 Ga0501044_1573952_221_475 63
159 3300049823 Ga0501044_1603565 Ga0501044_1603565_80_334 63
160 3300049824 Ga0501045_0190620 Ga0501045_0190620_433_687 63
161 3300050490 nmdc:mga03n38_16076_c1 nmdc:mga03n38_16076_c1_171_425 63
162 3300050490 nmdc:mga03n38_2399_c1 nmdc:mga03n38_2399_c1_4426_4680 63
163 3300050494 nmdc:mga06z11_9_c1 nmdc:mga06z11_9_c1_87830_88084 63
164 3300050495 nmdc:mga04h51_12_c1 nmdc:mga04h51_12_c1_21899_22153 63
165 3300050496 nmdc:mga07m45_94117_c2 nmdc:mga07m45_94117_c2_179_433 63
166 3300053092 Ga0500583_0000079 Ga0500583_0000079_10508_10762 63
167 3300053131 Ga0500652_235947 Ga0500652_235947_437_691 63
168 3300053136 Ga0500559_0001523 Ga0500559_0001523_7589_7843 63
169 3300053177 Ga0500636_0015719 Ga0500636_0015719_545_799 63

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF23807

18

79

0.82

Feature Viewer

pLDDT pTM Quality
66.09 0.29 Low
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map