F252619
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 168 | 127 | 168 | 384 |
Family's Representative Sequence
| Representative Sequence | 3300009553|Ga0105249_10040914|Ga0105249_100409143 |
| Length | 434 |
| Sequence | LKSPNLLVLFFLNILSKDIAMRKLGSIQISKYFATGLTIASFLLPVSAQSPRPRARDIGLKIGVLPTGSLNAITDVPGVAVGHTTVVQGENIRTGVTAIVPHGGNLFQEKVPGAVFVGNGFGKLMGSTQVNELGEIETPIVLTSTLSVPRVGDFVLDYMLALPGNENVQSINAVVAETNDGFLNDIRGRHITRDDVFGALRNAKSGAIEEGSVGAGTGTVAFGWKGGIGTSSRKLPSSLGGYTIGILVQTNFGGVLSIDGVPIGVELGKYYLKEAVGENHPVGETPTPLLRKEGSFDPNNPQSQIRNPQSPDGSIIIVIATDAPLDHRQLNRLAARSMSGLARTGSSMSNGSGDYAIAFSTANRINASEKVRNVRLVGNDAMSPLFQAVIEATEEAILNSLFKATTVTGKDKRTVEALPIDRVKELLKKYGRIS |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2162886006 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v1 | Metagenome | Rhizosphere |
| 2 | 3300003316 | Sugarcane root Sample L1 | Metagenome | Unclassified |
| 3 | 3300003791 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 | Metagenome | Endosphere |
| 4 | 3300005262 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) | Metagenome | Endosphere |
| 5 | 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) | Metagenome | Rhizosphere |
| 6 | 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) | Metagenome | Rhizosphere |
| 7 | 3300005329 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG | Metagenome | Rhizosphere |
| 8 | 3300005333 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG | Metagenome | Rhizosphere |
| 9 | 3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Metagenome | Rhizosphere |
| 10 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 11 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005366 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG | Metagenome | Rhizosphere |
| 13 | 3300005434 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG | Metagenome | Rhizosphere |
| 14 | 3300005436 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG | Metagenome | Rhizosphere |
| 15 | 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Metagenome | Rhizosphere |
| 16 | 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Metagenome | Rhizosphere |
| 19 | 3300005544 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG | Metagenome | Rhizosphere |
| 20 | 3300005546 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG | Metagenome | Rhizosphere |
| 21 | 3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Metagenome | Rhizosphere |
| 22 | 3300005563 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 | Metagenome | Rhizosphere |
| 23 | 3300005564 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG | Metagenome | Rhizosphere |
| 24 | 3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Metagenome | Rhizosphere |
| 25 | 3300005614 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 | Metagenome | Rhizosphere |
| 26 | 3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Metagenome | Rhizosphere |
| 27 | 3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Metagenome | Rhizosphere |
| 28 | 3300005718 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 | Metagenome | Rhizosphere |
| 29 | 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Metagenome | Rhizosphere |
| 30 | 3300005834 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 | Metagenome | Rhizosphere |
| 31 | 3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Metagenome | Rhizosphere |
| 32 | 3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Metagenome | Rhizosphere |
| 33 | 3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Metagenome | Rhizosphere |
| 34 | 3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Metagenome | Rhizosphere |
| 35 | 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Metagenome | Rhizosphere |
| 36 | 3300005985 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Metagenome | Rhizosphere |
| 37 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 38 | 3300006844 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Metagenome | Rhizosphere |
| 39 | 3300006871 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Metagenome | Rhizosphere |
| 40 | 3300006880 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 | Metagenome | Rhizosphere |
| 41 | 3300007076 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Metagenome | Rhizosphere |
| 42 | 3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Metagenome | Rhizosphere |
| 43 | 3300009094 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 45 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Metagenome | Rhizosphere |
| 47 | 3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Metagenome | Rhizosphere |
| 48 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 49 | 3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Metagenome | Rhizosphere |
| 50 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 51 | 3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Metagenome | Rhizosphere |
| 52 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 53 | 3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Metagenome | Rhizosphere |
| 54 | 3300014326 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG | Metagenome | Rhizosphere |
| 55 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 56 | 3300025297 | Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) | Metagenome | Endosphere |
| 57 | 3300025298 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 58 | 3300025304 | Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) | Metagenome | Endosphere |
| 59 | 3300025321 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300025906 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300025908 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 64 | 3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 65 | 3300025918 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 66 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 67 | 3300025929 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 68 | 3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 69 | 3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 70 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 71 | 3300025945 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 72 | 3300025949 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 73 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 74 | 3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 75 | 3300025986 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 76 | 3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 77 | 3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 78 | 3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 79 | 3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 80 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 81 | 3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 82 | 3300028381 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 83 | 3300031548 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 | Metagenome | Rhizosphere |
| 84 | 3300031824 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 | Metagenome | Rhizosphere |
| 85 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 86 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 87 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 88 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 89 | 3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Metagenome | Rhizosphere |
| 90 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 91 | 3300037471 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 | Metagenome | Rhizosphere |
| 92 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 93 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 94 | 3300041406 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 | Metagenome | Rhizosphere |
| 95 | 3300042015 | Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 | Metagenome | Rhizosphere |
| 96 | 3300044712 | Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED | Metagenome | Rhizosphere |
| 97 | 3300045051 | Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED | Metagenome | Rhizosphere |
| 98 | 3300045976 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R | Metagenome | Rhizosphere |
| 99 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300046473 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300046616 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300046694 | Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere | Metagenome | Rhizosphere |
| 103 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 104 | 3300049576 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 105 | 3300049577 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 106 | 3300049578 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 107 | 3300049581 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 108 | 3300049582 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 109 | 3300049585 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 | Metagenome | Rhizosphere |
| 110 | 3300049587 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 | Metagenome | Rhizosphere |
| 111 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 112 | 3300049591 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 | Metagenome | Rhizosphere |
| 113 | 3300049592 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 | Metagenome | Rhizosphere |
| 114 | 3300049593 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 | Metagenome | Rhizosphere |
| 115 | 3300049741 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 | Metagenome | Rhizosphere |
| 116 | 3300049742 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 | Metagenome | Rhizosphere |
| 117 | 3300049824 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 | Metagenome | Rhizosphere |
| 118 | 3300050507 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation | Metagenome | Rhizosphere |
| 119 | 3300050508 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation | Metagenome | Rhizosphere |
| 120 | 3300050511 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation | Metagenome | Rhizosphere |
| 121 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 122 | 3300050513 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation | Metagenome | Rhizosphere |
| 123 | 3300053123 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere | Metagenome | Endosphere |
| 124 | 3300053156 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere | Metagenome | Endosphere |
| 125 | 3300054114 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 | Metagenome | Rhizosphere |
| 126 | 3300059421 | Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 | Metagenome | Rhizosphere |
| 127 | 3300060353 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 | Metagenome | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 100 |
| Metatranscriptomes | 0 |
| Isolates | 0 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 4.17 |
| Nodule | 0 |
| Rhizoplane | 0.6 |
| Rhizosphere | 94.05 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 1.19 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | SwRhRL3b_contig_1602076 | 2162886006 | Unclassified | 1304 |
| 2 | rootH1_10081656 | 3300003316 | Bacteria | 4233 |
| 3 | Ga0055530_10000066 | 3300003791 | Bacteria | 93405 |
| 4 | Ga0065165_1000103 | 3300005262 | Bacteria | 140705 |
| 5 | Ga0065704_10111008 | 3300005289 | Bacteria | 1967 |
| 6 | Ga0065707_10030106 | 3300005295 | Bacteria | 1437 |
| 7 | Ga0065707_10102077 | 3300005295 | Bacteria | 2827 |
| 8 | Ga0070683_100000011 | 3300005329 | Bacteria | 283682 |
| 9 | Ga0070677_10023171 | 3300005333 | Unclassified | 2296 |
| 10 | Ga0070687_100004731 | 3300005343 | Bacteria | 5448 |
| 11 | Ga0070687_100046333 | 3300005343 | Bacteria | 2225 |
| 12 | Ga0070668_100035860 | 3300005347 | Bacteria | 3785 |
| 13 | Ga0070669_100047393 | 3300005353 | Bacteria | 3135 |
| 14 | Ga0070659_100102173 | 3300005366 | Bacteria | 2308 |
| 15 | Ga0070709_10000075 | 3300005434 | Bacteria | 75453 |
| 16 | Ga0070709_10030773 | 3300005434 | Bacteria | 3224 |
| 17 | Ga0070709_10152728 | 3300005434 | Bacteria | 1597 |
| 18 | Ga0070713_100050578 | 3300005436 | Unclassified | 3433 |
| 19 | Ga0070711_100262208 | 3300005439 | Bacteria | 1360 |
| 20 | Ga0070708_100116537 | 3300005445 | Bacteria | 2460 |
| 21 | Ga0070708_100291693 | 3300005445 | Bacteria | 1536 |
| 22 | Ga0070681_10018526 | 3300005458 | Bacteria | 6959 |
| 23 | Ga0070681_10021305 | 3300005458 | Bacteria | 6497 |
| 24 | Ga0070681_10142505 | 3300005458 | Bacteria | 2326 |
| 25 | Ga0070681_10468418 | 3300005458 | Bacteria | 1172 |
| 26 | Ga0070684_100000001 | 3300005535 | Bacteria | 300240 |
| 27 | Ga0070686_100199483 | 3300005544 | Bacteria | 1433 |
| 28 | Ga0070696_100024644 | 3300005546 | Bacteria | 4090 |
| 29 | Ga0070665_100048994 | 3300005548 | Bacteria | 4240 |
| 30 | Ga0068855_100015377 | 3300005563 | Bacteria | 9213 |
| 31 | Ga0070664_100010710 | 3300005564 | Bacteria | 7437 |
| 32 | Ga0068857_100002895 | 3300005577 | Bacteria | 14124 |
| 33 | Ga0068856_100128187 | 3300005614 | Unclassified | 2541 |
| 34 | Ga0070702_100016340 | 3300005615 | Bacteria | 3806 |
| 35 | Ga0068864_100012058 | 3300005618 | Bacteria | 7139 |
| 36 | Ga0068866_10019562 | 3300005718 | Bacteria | 3086 |
| 37 | Ga0068861_100052259 | 3300005719 | Bacteria | 3105 |
| 38 | Ga0068851_10029142 | 3300005834 | Bacteria | 2731 |
| 39 | Ga0068870_10006085 | 3300005840 | Bacteria | 5300 |
| 40 | Ga0068863_100018661 | 3300005841 | Bacteria | 6637 |
| 41 | Ga0068863_100062539 | 3300005841 | Bacteria | 3520 |
| 42 | Ga0068858_100062887 | 3300005842 | Bacteria | 3433 |
| 43 | Ga0068860_100004649 | 3300005843 | Bacteria | 14015 |
| 44 | Ga0081455_10000382 | 3300005937 | Bacteria | 58627 |
| 45 | Ga0081455_10018408 | 3300005937 | Bacteria | 6656 |
| 46 | Ga0081455_10021769 | 3300005937 | Bacteria | 6006 |
| 47 | Ga0081539_10000514 | 3300005985 | Bacteria | 80510 |
| 48 | Ga0081539_10012741 | 3300005985 | Bacteria | 6432 |
| 49 | Ga0070712_100124431 | 3300006175 | Bacteria | 1945 |
| 50 | Ga0075428_100229992 | 3300006844 | Bacteria | 2001 |
| 51 | Ga0075434_100019308 | 3300006871 | Bacteria | 6596 |
| 52 | Ga0075429_100099592 | 3300006880 | Bacteria | 2536 |
| 53 | Ga0075429_100257569 | 3300006880 | Bacteria | 1528 |
| 54 | Ga0075435_100025061 | 3300007076 | Bacteria | 4639 |
| 55 | Ga0075435_100042976 | 3300007076 | Bacteria | 3617 |
| 56 | Ga0105240_10177856 | 3300009093 | Bacteria | 2514 |
| 57 | Ga0111539_10085150 | 3300009094 | Bacteria | 3716 |
| 58 | Ga0111539_10098820 | 3300009094 | Bacteria | 3428 |
| 59 | Ga0105247_10097620 | 3300009101 | Unclassified | 1874 |
| 60 | Ga0114129_10058021 | 3300009147 | Bacteria | 5416 |
| 61 | Ga0114129_10229652 | 3300009147 | Bacteria | 2500 |
| 62 | Ga0114129_10313250 | 3300009147 | Bacteria | 2088 |
| 63 | Ga0105241_10272054 | 3300009174 | Bacteria | 1444 |
| 64 | Ga0105248_10161801 | 3300009177 | Bacteria | 2524 |
| 65 | Ga0105248_10296841 | 3300009177 | Bacteria | 1820 |
| 66 | Ga0105248_10578967 | 3300009177 | Bacteria | 1266 |
| 67 | Ga0105249_10040914 | 3300009553 | Bacteria | 4211 |
| 68 | Ga0105239_10212774 | 3300010375 | Bacteria | 2167 |
| 69 | Ga0157369_10026066 | 3300013105 | Bacteria | 6485 |
| 70 | Ga0157378_10046741 | 3300013297 | Bacteria | 3847 |
| 71 | Ga0157378_10132315 | 3300013297 | Bacteria | 2310 |
| 72 | Ga0157372_10018179 | 3300013307 | Bacteria | 7557 |
| 73 | Ga0163163_10128605 | 3300014325 | Bacteria | 2572 |
| 74 | Ga0157380_10003019 | 3300014326 | Bacteria | 11465 |
| 75 | Ga0163161_10077197 | 3300017792 | Bacteria | 2446 |
| 76 | Ga0209758_1000601 | 3300025297 | Bacteria | 55865 |
| 77 | Ga0209050_1000038 | 3300025298 | Bacteria | 412635 |
| 78 | Ga0209257_1000138 | 3300025304 | Bacteria | 204131 |
| 79 | Ga0207656_10037696 | 3300025321 | Bacteria | 2035 |
| 80 | Ga0207680_10032762 | 3300025903 | Bacteria | 2958 |
| 81 | Ga0207699_10000001 | 3300025906 | Bacteria | 695560 |
| 82 | Ga0207699_10100038 | 3300025906 | Bacteria | 1838 |
| 83 | Ga0207643_10010692 | 3300025908 | Bacteria | 4945 |
| 84 | Ga0207684_10063944 | 3300025910 | Bacteria | 3124 |
| 85 | Ga0207684_10073198 | 3300025910 | Unclassified | 2910 |
| 86 | Ga0207684_10323306 | 3300025910 | Bacteria | 1329 |
| 87 | Ga0207695_10040285 | 3300025913 | Bacteria | 5012 |
| 88 | Ga0207662_10026019 | 3300025918 | Bacteria | 3374 |
| 89 | Ga0207662_10085421 | 3300025918 | Bacteria | 1933 |
| 90 | Ga0207681_10010716 | 3300025923 | Bacteria | 5625 |
| 91 | Ga0207664_10026558 | 3300025929 | Bacteria | 4378 |
| 92 | Ga0207664_10159008 | 3300025929 | Bacteria | 1926 |
| 93 | Ga0207706_10019113 | 3300025933 | Bacteria | 6163 |
| 94 | Ga0207711_10413807 | 3300025941 | Bacteria | 1253 |
| 95 | Ga0207661_10000016 | 3300025944 | Bacteria | 305159 |
| 96 | Ga0207679_10009042 | 3300025945 | Bacteria | 6366 |
| 97 | Ga0207667_10030041 | 3300025949 | Bacteria | 5883 |
| 98 | Ga0207712_10036551 | 3300025961 | Bacteria | 3346 |
| 99 | Ga0207668_10118353 | 3300025972 | Bacteria | 2001 |
| 100 | Ga0207658_10095803 | 3300025986 | Bacteria | 2313 |
| 101 | Ga0207703_10029380 | 3300026035 | Bacteria | 4337 |
| 102 | Ga0207639_10005300 | 3300026041 | Bacteria | 8704 |
| 103 | Ga0207641_10000599 | 3300026088 | Bacteria | 39635 |
| 104 | Ga0207641_10172402 | 3300026088 | Bacteria | 1976 |
| 105 | Ga0207674_10004939 | 3300026116 | Bacteria | 15929 |
| 106 | Ga0207683_10048743 | 3300026121 | Unclassified | 3708 |
| 107 | Ga0268266_10003414 | 3300028379 | Bacteria | 15899 |
| 108 | Ga0268264_10000034 | 3300028381 | Bacteria | 401894 |
| 109 | Ga0307408_100145465 | 3300031548 | Bacteria | 1865 |
| 110 | Ga0307413_10004251 | 3300031824 | Bacteria | 6198 |
| 111 | Ga0307413_10028828 | 3300031824 | Bacteria | 3098 |
| 112 | Ga0307407_10149601 | 3300031903 | Bacteria | 1515 |
| 113 | Ga0307409_100048310 | 3300031995 | Bacteria | 3237 |
| 114 | Ga0307409_100308065 | 3300031995 | Bacteria | 1476 |
| 115 | Ga0307416_100004338 | 3300032002 | Bacteria | 8529 |
| 116 | Ga0307416_100019717 | 3300032002 | Bacteria | 4790 |
| 117 | Ga0307414_10078528 | 3300032004 | Bacteria | 2406 |
| 118 | Ga0307414_10101120 | 3300032004 | Unclassified | 2170 |
| 119 | Ga0307411_10038675 | 3300032005 | Bacteria | 3011 |
| 120 | Ga0307415_100050754 | 3300032126 | Bacteria | 2812 |
| 121 | Ga0395905_0185466 | 3300037471 | Bacteria | 1953 |
| 122 | Ga0395905_0270989 | 3300037471 | Bacteria | 1583 |
| 123 | Ga0436365_1831723 | 3300039437 | Bacteria | 7828 |
| 124 | Ga0436360_0962343 | 3300039438 | Bacteria | 9874 |
| 125 | Ga0439439_0006685 | 3300041406 | Bacteria | 2672 |
| 126 | Ga0439462_0032135 | 3300042015 | Bacteria | 1391 |
| 127 | Ga0453684_0020459 | 3300044712 | Bacteria | 9977 |
| 128 | Ga0453684_0092345 | 3300044712 | Unclassified | 3732 |
| 129 | Ga0453684_0179850 | 3300044712 | Bacteria | 2484 |
| 130 | Ga0453684_0296042 | 3300044712 | Bacteria | 1841 |
| 131 | Ga0451576_0028434 | 3300045051 | Bacteria | 5988 |
| 132 | Ga0451576_0122596 | 3300045051 | Unclassified | 2707 |
| 133 | Ga0466967_0033467 | 3300045976 | Bacteria | 4351 |
| 134 | Ga0495580_0002713 | 3300046472 | Bacteria | 15302 |
| 135 | Ga0495582_0000034 | 3300046473 | Bacteria | 72053 |
| 136 | Ga0495668_0067932 | 3300046616 | Bacteria | 1961 |
| 137 | Ga0495649_0052201 | 3300046694 | Bacteria | 2216 |
| 138 | Ga0496101_0017554 | 3300048904 | Bacteria | 4854 |
| 139 | Ga0501040_0148453 | 3300049576 | Bacteria | 1653 |
| 140 | Ga0501041_0032565 | 3300049577 | Bacteria | 3150 |
| 141 | Ga0501041_0113092 | 3300049577 | Unclassified | 1685 |
| 142 | Ga0501042_0091560 | 3300049578 | Bacteria | 2183 |
| 143 | Ga0501047_0281381 | 3300049581 | Bacteria | 1508 |
| 144 | Ga0501048_0066207 | 3300049582 | Bacteria | 2554 |
| 145 | Ga0501069_0055517 | 3300049585 | Bacteria | 2207 |
| 146 | Ga0501071_0011171 | 3300049587 | Bacteria | 6040 |
| 147 | Ga0501074_0066120 | 3300049590 | Unclassified | 2601 |
| 148 | Ga0501075_0039009 | 3300049591 | Bacteria | 3553 |
| 149 | Ga0501076_0081091 | 3300049592 | Bacteria | 2605 |
| 150 | Ga0501077_0009553 | 3300049593 | Bacteria | 6030 |
| 151 | Ga0501079_0014018 | 3300049741 | Bacteria | 6114 |
| 152 | Ga0501080_0036847 | 3300049742 | Bacteria | 4566 |
| 153 | Ga0501045_0062210 | 3300049824 | Bacteria | 2739 |
| 154 | nmdc:mga05p37_14802_c1 | 3300050507 | Bacteria | 9366 |
| 155 | nmdc:mga05p37_291905_c1 | 3300050507 | Bacteria | 1941 |
| 156 | nmdc:mga09592_111769_c1 | 3300050508 | Bacteria | 2344 |
| 157 | nmdc:mga09592_315104_c1 | 3300050508 | Bacteria | 1355 |
| 158 | nmdc:mga08y16_100060_c1 | 3300050511 | Unclassified | 3018 |
| 159 | nmdc:mga08y16_2553_c1 | 3300050511 | Bacteria | 18720 |
| 160 | nmdc:mga0n895_25933_c1 | 3300050512 | Bacteria | 5543 |
| 161 | nmdc:mga0n895_45141_c1 | 3300050512 | Bacteria | 4299 |
| 162 | nmdc:mga0rr50_62313_c1 | 3300050513 | Bacteria | 2813 |
| 163 | Ga0500614_013499 | 3300053123 | Unclassified | 1796 |
| 164 | Ga0500622_0001935 | 3300053156 | Bacteria | 15611 |
| 165 | Ga0501084_0044742 | 3300054114 | Bacteria | 3706 |
| 166 | Ga0590071_003099 | 3300059421 | Bacteria | 4120 |
| 167 | Ga0501082_0009251 | 3300060353 | Bacteria | 8492 |
| 168 | Ga0501082_0123026 | 3300060353 | Bacteria | 2250 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300005262 | Ga0065165_1000103 | Ga0065165_1000103115 | 284 |
| 2 | 3300025910 | Ga0207684_10323306 | Ga0207684_103233061 | 317 |
| 3 | 3300005615 | Ga0070702_100016340 | Ga0070702_1000163403 | 319 |
| 4 | 3300005458 | Ga0070681_10468418 | Ga0070681_104684181 | 323 |
| 5 | 3300006844 | Ga0075428_100229992 | Ga0075428_1002299922 | 324 |
| 6 | 3300005329 | Ga0070683_100000011 | Ga0070683_10000001149 | 325 |
| 7 | 3300005535 | Ga0070684_100000001 | Ga0070684_100000001209 | 325 |
| 8 | 3300025944 | Ga0207661_10000016 | Ga0207661_10000016210 | 325 |
| 9 | 3300010375 | Ga0105239_10212774 | Ga0105239_102127742 | 326 |
| 10 | 3300049576 | Ga0501040_0148453 | Ga0501040_0148453_382_1515 | 328 |
| 11 | 3300049577 | Ga0501041_0032565 | Ga0501041_0032565_1438_2571 | 328 |
| 12 | 3300049582 | Ga0501048_0066207 | Ga0501048_0066207_126_1259 | 328 |
| 13 | 3300049587 | Ga0501071_0011171 | Ga0501071_0011171_2483_3616 | 328 |
| 14 | 3300049591 | Ga0501075_0039009 | Ga0501075_0039009_904_2037 | 328 |
| 15 | 3300049593 | Ga0501077_0009553 | Ga0501077_0009553_88_1221 | 328 |
| 16 | 3300049741 | Ga0501079_0014018 | Ga0501079_0014018_3074_4207 | 328 |
| 17 | 3300054114 | Ga0501084_0044742 | Ga0501084_0044742_896_2029 | 328 |
| 18 | 3300060353 | Ga0501082_0009251 | Ga0501082_0009251_7006_8139 | 328 |
| 19 | 3300005434 | Ga0070709_10152728 | Ga0070709_101527282 | 333 |
| 20 | 3300025906 | Ga0207699_10100038 | Ga0207699_101000382 | 333 |
| 21 | 3300003791 | Ga0055530_10000066 | Ga0055530_100000664 | 335 |
| 22 | 3300025297 | Ga0209758_1000601 | Ga0209758_100060146 | 335 |
| 23 | 3300025298 | Ga0209050_1000038 | Ga0209050_1000038233 | 335 |
| 24 | 3300025304 | Ga0209257_1000138 | Ga0209257_1000138123 | 335 |
| 25 | 3300053156 | Ga0500622_0001935 | Ga0500622_0001935_11230_12396 | 335 |
| 26 | 3300005353 | Ga0070669_100047393 | Ga0070669_1000473932 | 337 |
| 27 | 3300025923 | Ga0207681_10010716 | Ga0207681_100107163 | 337 |
| 28 | 3300050512 | nmdc:mga0n895_45141_c1 | nmdc:mga0n895_45141_c1_3030_4133 | 337 |
| 29 | 3300037471 | Ga0395905_0185466 | Ga0395905_0185466_48_1208 | 338 |
| 30 | 3300005445 | Ga0070708_100291693 | Ga0070708_1002916932 | 340 |
| 31 | 3300005841 | Ga0068863_100062539 | Ga0068863_1000625392 | 340 |
| 32 | 3300005842 | Ga0068858_100062887 | Ga0068858_1000628874 | 340 |
| 33 | 3300026035 | Ga0207703_10029380 | Ga0207703_100293804 | 340 |
| 34 | 3300046472 | Ga0495580_0002713 | Ga0495580_0002713_10478_11683 | 340 |
| 35 | 3300046473 | Ga0495582_0000034 | Ga0495582_0000034_41594_42799 | 340 |
| 36 | 3300005347 | Ga0070668_100035860 | Ga0070668_1000358603 | 342 |
| 37 | 3300025972 | Ga0207668_10118353 | Ga0207668_101183532 | 342 |
| 38 | 3300049578 | Ga0501042_0091560 | Ga0501042_0091560_124_1254 | 342 |
| 39 | 3300049592 | Ga0501076_0081091 | Ga0501076_0081091_17_1147 | 342 |
| 40 | 3300049824 | Ga0501045_0062210 | Ga0501045_0062210_210_1340 | 342 |
| 41 | 3300045976 | Ga0466967_0033467 | Ga0466967_0033467_127_1296 | 344 |
| 42 | 3300041406 | Ga0439439_0006685 | Ga0439439_0006685_184_1296 | 346 |
| 43 | 3300042015 | Ga0439462_0032135 | Ga0439462_0032135_121_1233 | 346 |
| 44 | 3300049581 | Ga0501047_0281381 | Ga0501047_0281381_70_1191 | 347 |
| 45 | 3300005985 | Ga0081539_10000514 | Ga0081539_1000051430 | 348 |
| 46 | 3300009553 | Ga0105249_10040914 | Ga0105249_100409143 | 348 |
| 47 | 3300025961 | Ga0207712_10036551 | Ga0207712_100365513 | 348 |
| 48 | 3300026088 | Ga0207641_10172402 | Ga0207641_101724022 | 348 |
| 49 | 3300003316 | rootH1_10081656 | rootH1_100816563 | 349 |
| 50 | 3300005333 | Ga0070677_10023171 | Ga0070677_100231712 | 349 |
| 51 | 3300005366 | Ga0070659_100102173 | Ga0070659_1001021732 | 349 |
| 52 | 3300005458 | Ga0070681_10018526 | Ga0070681_100185262 | 349 |
| 53 | 3300005548 | Ga0070665_100048994 | Ga0070665_1000489942 | 349 |
| 54 | 3300005563 | Ga0068855_100015377 | Ga0068855_1000153774 | 349 |
| 55 | 3300005564 | Ga0070664_100010710 | Ga0070664_1000107103 | 349 |
| 56 | 3300005577 | Ga0068857_100002895 | Ga0068857_1000028956 | 349 |
| 57 | 3300005718 | Ga0068866_10019562 | Ga0068866_100195622 | 349 |
| 58 | 3300005834 | Ga0068851_10029142 | Ga0068851_100291423 | 349 |
| 59 | 3300005840 | Ga0068870_10006085 | Ga0068870_100060855 | 349 |
| 60 | 3300006871 | Ga0075434_100019308 | Ga0075434_1000193084 | 349 |
| 61 | 3300007076 | Ga0075435_100042976 | Ga0075435_1000429762 | 349 |
| 62 | 3300009101 | Ga0105247_10097620 | Ga0105247_100976201 | 349 |
| 63 | 3300009177 | Ga0105248_10578967 | Ga0105248_105789671 | 349 |
| 64 | 3300013105 | Ga0157369_10026066 | Ga0157369_100260664 | 349 |
| 65 | 3300013307 | Ga0157372_10018179 | Ga0157372_100181798 | 349 |
| 66 | 3300014326 | Ga0157380_10003019 | Ga0157380_100030199 | 349 |
| 67 | 3300025321 | Ga0207656_10037696 | Ga0207656_100376962 | 349 |
| 68 | 3300025908 | Ga0207643_10010692 | Ga0207643_100106922 | 349 |
| 69 | 3300025933 | Ga0207706_10019113 | Ga0207706_100191133 | 349 |
| 70 | 3300025945 | Ga0207679_10009042 | Ga0207679_100090428 | 349 |
| 71 | 3300025949 | Ga0207667_10030041 | Ga0207667_100300411 | 349 |
| 72 | 3300026041 | Ga0207639_10005300 | Ga0207639_100053009 | 349 |
| 73 | 3300026116 | Ga0207674_10004939 | Ga0207674_1000493910 | 349 |
| 74 | 3300026121 | Ga0207683_10048743 | Ga0207683_100487432 | 349 |
| 75 | 3300028379 | Ga0268266_10003414 | Ga0268266_100034145 | 349 |
| 76 | 3300049585 | Ga0501069_0055517 | Ga0501069_0055517_895_2013 | 349 |
| 77 | 3300050512 | nmdc:mga0n895_25933_c1 | nmdc:mga0n895_25933_c1_269_1465 | 349 |
| 78 | 3300005458 | Ga0070681_10142505 | Ga0070681_101425052 | 350 |
| 79 | 3300005544 | Ga0070686_100199483 | Ga0070686_1001994831 | 350 |
| 80 | 3300005618 | Ga0068864_100012058 | Ga0068864_1000120583 | 350 |
| 81 | 3300006880 | Ga0075429_100257569 | Ga0075429_1002575691 | 350 |
| 82 | 3300007076 | Ga0075435_100025061 | Ga0075435_1000250614 | 350 |
| 83 | 3300009094 | Ga0111539_10085150 | Ga0111539_100851502 | 350 |
| 84 | 3300009147 | Ga0114129_10313250 | Ga0114129_103132503 | 350 |
| 85 | 3300009177 | Ga0105248_10296841 | Ga0105248_102968411 | 350 |
| 86 | 3300013297 | Ga0157378_10132315 | Ga0157378_101323152 | 350 |
| 87 | 3300014325 | Ga0163163_10128605 | Ga0163163_101286052 | 350 |
| 88 | 3300032004 | Ga0307414_10101120 | Ga0307414_101011202 | 350 |
| 89 | 3300050507 | nmdc:mga05p37_291905_c1 | nmdc:mga05p37_291905_c1_212_1354 | 350 |
| 90 | 3300050508 | nmdc:mga09592_315104_c1 | nmdc:mga09592_315104_c1_136_1278 | 350 |
| 91 | 3300050511 | nmdc:mga08y16_2553_c1 | nmdc:mga08y16_2553_c1_16173_17495 | 350 |
| 92 | 3300050513 | nmdc:mga0rr50_62313_c1 | nmdc:mga0rr50_62313_c1_678_1898 | 350 |
| 93 | 3300005343 | Ga0070687_100046333 | Ga0070687_1000463332 | 351 |
| 94 | 3300009094 | Ga0111539_10098820 | Ga0111539_100988202 | 351 |
| 95 | 3300009147 | Ga0114129_10058021 | Ga0114129_100580212 | 351 |
| 96 | 3300025918 | Ga0207662_10026019 | Ga0207662_100260192 | 351 |
| 97 | 3300044712 | Ga0453684_0020459 | Ga0453684_0020459_6151_7260 | 351 |
| 98 | 3300044712 | Ga0453684_0179850 | Ga0453684_0179850_94_1170 | 351 |
| 99 | 3300050511 | nmdc:mga08y16_100060_c1 | nmdc:mga08y16_100060_c1_299_1438 | 351 |
| 100 | 3300059421 | Ga0590071_003099 | Ga0590071_003099_2296_3429 | 351 |
| 101 | 3300005937 | Ga0081455_10018408 | Ga0081455_100184083 | 352 |
| 102 | 3300005985 | Ga0081539_10012741 | Ga0081539_100127415 | 352 |
| 103 | 3300031548 | Ga0307408_100145465 | Ga0307408_1001454652 | 352 |
| 104 | 3300031824 | Ga0307413_10004251 | Ga0307413_100042517 | 352 |
| 105 | 3300031824 | Ga0307413_10028828 | Ga0307413_100288282 | 352 |
| 106 | 3300031903 | Ga0307407_10149601 | Ga0307407_101496012 | 352 |
| 107 | 3300031995 | Ga0307409_100048310 | Ga0307409_1000483102 | 352 |
| 108 | 3300031995 | Ga0307409_100308065 | Ga0307409_1003080652 | 352 |
| 109 | 3300032002 | Ga0307416_100004338 | Ga0307416_1000043387 | 352 |
| 110 | 3300032002 | Ga0307416_100019717 | Ga0307416_1000197174 | 352 |
| 111 | 3300032004 | Ga0307414_10078528 | Ga0307414_100785282 | 352 |
| 112 | 3300032005 | Ga0307411_10038675 | Ga0307411_100386752 | 352 |
| 113 | 3300032126 | Ga0307415_100050754 | Ga0307415_1000507542 | 352 |
| 114 | 3300039437 | Ga0436365_1831723 | Ga0436365_1831723_556_1725 | 352 |
| 115 | 3300044712 | Ga0453684_0296042 | Ga0453684_0296042_32_1102 | 352 |
| 116 | 3300046616 | Ga0495668_0067932 | Ga0495668_0067932_378_1589 | 352 |
| 117 | 3300005295 | Ga0065707_10102077 | Ga0065707_101020771 | 353 |
| 118 | 3300005343 | Ga0070687_100004731 | Ga0070687_1000047315 | 353 |
| 119 | 3300005434 | Ga0070709_10000075 | Ga0070709_1000007537 | 353 |
| 120 | 3300005445 | Ga0070708_100116537 | Ga0070708_1001165372 | 353 |
| 121 | 3300005719 | Ga0068861_100052259 | Ga0068861_1000522591 | 353 |
| 122 | 3300005937 | Ga0081455_10000382 | Ga0081455_1000038255 | 353 |
| 123 | 3300005937 | Ga0081455_10021769 | Ga0081455_100217692 | 353 |
| 124 | 3300006175 | Ga0070712_100124431 | Ga0070712_1001244311 | 353 |
| 125 | 3300009147 | Ga0114129_10229652 | Ga0114129_102296523 | 353 |
| 126 | 3300013297 | Ga0157378_10046741 | Ga0157378_100467412 | 353 |
| 127 | 3300017792 | Ga0163161_10077197 | Ga0163161_100771971 | 353 |
| 128 | 3300025906 | Ga0207699_10000001 | Ga0207699_10000001310 | 353 |
| 129 | 3300025910 | Ga0207684_10063944 | Ga0207684_100639442 | 353 |
| 130 | 3300025910 | Ga0207684_10073198 | Ga0207684_100731983 | 353 |
| 131 | 3300025918 | Ga0207662_10085421 | Ga0207662_100854212 | 353 |
| 132 | 3300037471 | Ga0395905_0270989 | Ga0395905_0270989_69_1217 | 353 |
| 133 | 3300044712 | Ga0453684_0092345 | Ga0453684_0092345_2459_3532 | 353 |
| 134 | 3300048904 | Ga0496101_0017554 | Ga0496101_0017554_334_1464 | 353 |
| 135 | 3300049590 | Ga0501074_0066120 | Ga0501074_0066120_77_1204 | 353 |
| 136 | 3300049742 | Ga0501080_0036847 | Ga0501080_0036847_627_1718 | 353 |
| 137 | 3300050507 | nmdc:mga05p37_14802_c1 | nmdc:mga05p37_14802_c1_7938_9101 | 353 |
| 138 | 2162886006 | SwRhRL3b_contig_1602076 | SwRhRL3b_0896.00001570 | 354 |
| 139 | 3300005289 | Ga0065704_10111008 | Ga0065704_101110082 | 354 |
| 140 | 3300005295 | Ga0065707_10030106 | Ga0065707_100301062 | 354 |
| 141 | 3300005434 | Ga0070709_10030773 | Ga0070709_100307733 | 354 |
| 142 | 3300005436 | Ga0070713_100050578 | Ga0070713_1000505783 | 354 |
| 143 | 3300005439 | Ga0070711_100262208 | Ga0070711_1002622081 | 354 |
| 144 | 3300005458 | Ga0070681_10021305 | Ga0070681_100213053 | 354 |
| 145 | 3300005546 | Ga0070696_100024644 | Ga0070696_1000246443 | 354 |
| 146 | 3300005614 | Ga0068856_100128187 | Ga0068856_1001281871 | 354 |
| 147 | 3300005841 | Ga0068863_100018661 | Ga0068863_1000186614 | 354 |
| 148 | 3300005843 | Ga0068860_100004649 | Ga0068860_1000046499 | 354 |
| 149 | 3300006880 | Ga0075429_100099592 | Ga0075429_1000995922 | 354 |
| 150 | 3300009093 | Ga0105240_10177856 | Ga0105240_101778562 | 354 |
| 151 | 3300009174 | Ga0105241_10272054 | Ga0105241_102720541 | 354 |
| 152 | 3300009177 | Ga0105248_10161801 | Ga0105248_101618011 | 354 |
| 153 | 3300025903 | Ga0207680_10032762 | Ga0207680_100327622 | 354 |
| 154 | 3300025913 | Ga0207695_10040285 | Ga0207695_100402854 | 354 |
| 155 | 3300025929 | Ga0207664_10026558 | Ga0207664_100265584 | 354 |
| 156 | 3300025929 | Ga0207664_10159008 | Ga0207664_101590082 | 354 |
| 157 | 3300025941 | Ga0207711_10413807 | Ga0207711_104138071 | 354 |
| 158 | 3300025986 | Ga0207658_10095803 | Ga0207658_100958031 | 354 |
| 159 | 3300026088 | Ga0207641_10000599 | Ga0207641_100005996 | 354 |
| 160 | 3300028381 | Ga0268264_10000034 | Ga0268264_1000003428 | 354 |
| 161 | 3300039438 | Ga0436360_0962343 | Ga0436360_0962343_1096_2295 | 354 |
| 162 | 3300045051 | Ga0451576_0028434 | Ga0451576_0028434_1201_2337 | 354 |
| 163 | 3300045051 | Ga0451576_0122596 | Ga0451576_0122596_320_1414 | 354 |
| 164 | 3300046694 | Ga0495649_0052201 | Ga0495649_0052201_557_1729 | 354 |
| 165 | 3300049577 | Ga0501041_0113092 | Ga0501041_0113092_342_1427 | 354 |
| 166 | 3300050508 | nmdc:mga09592_111769_c1 | nmdc:mga09592_111769_c1_84_1169 | 354 |
| 167 | 3300053123 | Ga0500614_013499 | Ga0500614_013499_329_1504 | 354 |
| 168 | 3300060353 | Ga0501082_0123026 | Ga0501082_0123026_220_1395 | 354 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 2drh-assembly1.cif.gz_C | crystal structure of the ph0078 protein from pyrococcus horikoshii ot3 | 0.9208 | 6 | 351 |
| 3n5i-assembly1.cif.gz_D | crystal structure of the precursor (s250a mutant) of the n-terminal beta-aminopeptidase bapa | 0.9051 | 6 | 351 |
| 1b65-assembly1.cif.gz_A | structure of l-aminopeptidase d-ala-esterase/amidase from ochrobactrum anthropi, a prototype for the serine aminopeptidases, reveals a new variant among the ntn hydrolase fold | 0.9049 | 7 | 350 |
| 2drh-assembly1.cif.gz_D | crystal structure of the ph0078 protein from pyrococcus horikoshii ot3 | 0.9011 | 6 | 350 |
| 3n5i-assembly1.cif.gz_C | crystal structure of the precursor (s250a mutant) of the n-terminal beta-aminopeptidase bapa | 0.8979 | 6 | 351 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3n5iD00 | Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase | 0.9051 | 6 | 351 | 3.60.70.12 |
| 1b65F00 | Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase | 0.9049 | 7 | 350 | 3.60.70.12 |
| 2drhD00 | Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase | 0.9011 | 6 | 350 | 3.60.70.12 |
| 5tzbB00 | Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase | 0.8881 | 7 | 350 | 3.60.70.12 |
| 3n5iD00 | Alpha Beta;4-Layer Sandwich;L-amino peptidase D-ALA esterase/amidase;L-amino peptidase D-ALA esterase/amidase | 0.8829 | 6 | 351 | 3.60.70.12 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A1D9H9D2-F1-model_v4 | Aminopeptidase | 0.9908 | 5 | 351 |
GO:0004177
|
| AF-A0A661YCM3-F1-model_v4 | deleted | 0.9877 | 1 | 217 |
|
| AF-A0A523HIV2-F1-model_v4 | S58 family peptidase | 0.9872 | 2 | 348 |
GO:0004177
GO:0016020 |
| AF-A0A117M8Z9-F1-model_v4 | deleted | 0.9869 | 6 | 351 |
|
| AF-A0A7X8AK16-F1-model_v4 | P1 family peptidase | 0.9864 | 2 | 351 |
GO:0004177
|
Predicted Structure (AlphaFold2)
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