F249001
General Info
| Members | Datasets | Scaffolds | Average Seq Length |
|---|---|---|---|
| 166 | 134 | 159 | 209 |
Family's Representative Sequence
| Representative Sequence | 3300046459|Ga0495629_0261835|Ga0495629_0261835_202_834 |
| Length | 191 |
| Sequence | LPISHDHIRDGAEIYRRSFAIIRQEADLARFDPVEERVAVRIIHACGMTEIGGAAILCDSKMVANGITRTRLPVDNAVICTLDDPAVPGIARRIGNTRTAAALELWGDRLAGAVVAVGNAPTALFRLLEMLDAGAPPPAAVIGLPVGFVGAMESKEALAADGRLPFLIVRGRRGGSAMAVAAVNALASDLE |
Samples
| Sample ID | Description | Type | Environment | |
|---|---|---|---|---|
| 1 | 2599185156 | Rhizobium sp. NFR03 | Isolate | Rhizoplane |
| 2 | 2828305725 | Xanthobacter tagetidis DSM 11105 | Isolate | Unclassified |
| 3 | 2842922631 | Pararhizobium sp. R-72066 | Isolate | Unclassified |
| 4 | 2915358134 | Pseudonocardia pini CAP47R | Isolate | Unclassified |
| 5 | 2919450847 | Ancylobacter sp. 3268 | Isolate | Rhizosphere |
| 6 | 2928142448 | Prescottella equi DPS 2018 | Isolate | Unclassified |
| 7 | 3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Metagenome | Rhizosphere |
| 8 | 3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Metagenome | Rhizosphere |
| 9 | 3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Metagenome | Rhizosphere |
| 10 | 3300005340 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG | Metagenome | Rhizosphere |
| 11 | 3300005344 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG | Metagenome | Rhizosphere |
| 12 | 3300005345 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG | Metagenome | Rhizosphere |
| 13 | 3300005347 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG | Metagenome | Rhizosphere |
| 14 | 3300005353 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG | Metagenome | Rhizosphere |
| 15 | 3300005441 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG | Metagenome | Rhizosphere |
| 16 | 3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Metagenome | Rhizosphere |
| 17 | 3300005458 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG | Metagenome | Rhizosphere |
| 18 | 3300005459 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 | Metagenome | Rhizosphere |
| 19 | 3300005466 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG | Metagenome | Rhizosphere |
| 20 | 3300005468 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG | Metagenome | Rhizosphere |
| 21 | 3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Metagenome | Rhizosphere |
| 22 | 3300006028 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG | Metagenome | Rhizosphere |
| 23 | 3300006048 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 | Metagenome | Endosphere |
| 24 | 3300006051 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 | Metagenome | Endosphere |
| 25 | 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Metagenome | Rhizosphere |
| 26 | 3300006175 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG | Metagenome | Rhizosphere |
| 27 | 3300006178 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 | Metagenome | Endosphere |
| 28 | 3300006186 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 | Metagenome | Endosphere |
| 29 | 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Metagenome | Rhizosphere |
| 30 | 3300007788 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 | Metagenome | Rhizosphere |
| 31 | 3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Metagenome | Rhizosphere |
| 32 | 3300009101 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG | Metagenome | Rhizosphere |
| 33 | 3300009147 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) | Metagenome | Rhizosphere |
| 34 | 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Metagenome | Rhizosphere |
| 35 | 3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Metagenome | Rhizosphere |
| 36 | 3300010159 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 | Metagenome | Rhizosphere |
| 37 | 3300013105 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG | Metagenome | Rhizosphere |
| 38 | 3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Metagenome | Rhizosphere |
| 39 | 3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Metagenome | Rhizosphere |
| 40 | 3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Metagenome | Rhizosphere |
| 41 | 3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Metagenome | Rhizosphere |
| 42 | 3300017792 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG | Metagenome | Rhizosphere |
| 43 | 3300025899 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 44 | 3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 45 | 3300025909 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 46 | 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 47 | 3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 48 | 3300025922 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 49 | 3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 50 | 3300025925 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 51 | 3300025927 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 52 | 3300025928 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 53 | 3300025936 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 54 | 3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 55 | 3300025944 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 56 | 3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 57 | 3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 58 | 3300026075 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 59 | 3300026118 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 60 | 3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 61 | 3300026142 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 62 | 3300027671 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) | Metagenome | Rhizosphere |
| 63 | 3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Metagenome | Unclassified |
| 64 | 3300031616 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM | Metagenome | Unclassified |
| 65 | 3300031711 | Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG | Metagenome | Rhizosphere |
| 66 | 3300031852 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 | Metagenome | Rhizosphere |
| 67 | 3300031901 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 | Metagenome | Rhizosphere |
| 68 | 3300031903 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 | Metagenome | Rhizosphere |
| 69 | 3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Metagenome | Rhizosphere |
| 70 | 3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Metagenome | Rhizosphere |
| 71 | 3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Metagenome | Rhizosphere |
| 72 | 3300032126 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 | Metagenome | Rhizosphere |
| 73 | 3300035116 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 | Metagenome | Rhizosphere |
| 74 | 3300035170 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 | Metagenome | Rhizosphere |
| 75 | 3300035691 | Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 | Metagenome | Rhizosphere |
| 76 | 3300035692 | Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 | Metagenome | Rhizosphere |
| 77 | 3300035695 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 | Metagenome | Rhizosphere |
| 78 | 3300035725 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 | Metagenome | Rhizosphere |
| 79 | 3300037068 | Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 | Metagenome | Rhizosphere |
| 80 | 3300037853 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 | Metagenome | Unclassified |
| 81 | 3300038443 | Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 | Metagenome | Rhizosphere |
| 82 | 3300039437 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 | Metagenome | Unclassified |
| 83 | 3300039438 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 | Metagenome | Rhizosphere |
| 84 | 3300039450 | Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 | Metagenome | Unclassified |
| 85 | 3300039453 | Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 | Metagenome | Rhizosphere |
| 86 | 3300042533 | Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0826F_E14_072516_1472 | Metagenome | Rhizosphere |
| 87 | 3300044658 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R | Metagenome | Rhizosphere |
| 88 | 3300044683 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R | Metagenome | Rhizosphere |
| 89 | 3300044693 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R | Metagenome | Rhizosphere |
| 90 | 3300044765 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R | Metagenome | Rhizosphere |
| 91 | 3300044901 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R | Metagenome | Rhizosphere |
| 92 | 3300046459 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere | Metagenome | Rhizosphere |
| 93 | 3300046463 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere | Metagenome | Rhizosphere |
| 94 | 3300046472 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere | Metagenome | Rhizosphere |
| 95 | 3300046516 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere | Metagenome | Rhizosphere |
| 96 | 3300046517 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere | Metagenome | Rhizosphere |
| 97 | 3300046533 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere | Metagenome | Rhizosphere |
| 98 | 3300046559 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere | Metagenome | Rhizosphere |
| 99 | 3300047315 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere | Metagenome | Rhizosphere |
| 100 | 3300047319 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere | Metagenome | Rhizosphere |
| 101 | 3300048089 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere | Metagenome | Rhizosphere |
| 102 | 3300048903 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled | Metagenome | Rhizoplane |
| 103 | 3300048904 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled | Metagenome | Rhizoplane |
| 104 | 3300048905 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 | Metagenome | Rhizoplane |
| 105 | 3300048907 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 | Metagenome | Rhizoplane |
| 106 | 3300048908 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 | Metagenome | Rhizoplane |
| 107 | 3300048911 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled | Metagenome | Rhizoplane |
| 108 | 3300048912 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled | Metagenome | Rhizoplane |
| 109 | 3300048913 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 | Metagenome | Rhizoplane |
| 110 | 3300048914 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 | Metagenome | Rhizoplane |
| 111 | 3300048915 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 | Metagenome | Rhizoplane |
| 112 | 3300048916 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 | Metagenome | Rhizoplane |
| 113 | 3300048918 | Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 | Metagenome | Rhizoplane |
| 114 | 3300048927 | Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 | Metagenome | Unclassified |
| 115 | 3300049569 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 116 | 3300049571 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 | Metagenome | Rhizosphere |
| 117 | 3300049574 | Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 | Metagenome | Rhizosphere |
| 118 | 3300049589 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 | Metagenome | Rhizosphere |
| 119 | 3300049590 | Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 | Metagenome | Rhizosphere |
| 120 | 3300050489 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation | Metagenome | Endosphere |
| 121 | 3300050492 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation | Metagenome | Endosphere |
| 122 | 3300050494 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation | Metagenome | Endosphere |
| 123 | 3300050512 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation | Metagenome | Rhizosphere |
| 124 | 3300050514 | Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation | Metagenome | Rhizosphere |
| 125 | 3300050516 | Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation | Metagenome | Endosphere |
| 126 | 3300053077 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere | Metagenome | Rhizosphere |
| 127 | 3300053084 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere | Metagenome | Rhizosphere |
| 128 | 3300053085 | Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere | Metagenome | Rhizosphere |
| 129 | 3300053119 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere | Metagenome | Endosphere |
| 130 | 3300053125 | Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere | Metagenome | Endosphere |
| 131 | 3300053134 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere | Metagenome | Endosphere |
| 132 | 3300053153 | Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere | Metagenome | Endosphere |
| 133 | 3300061719 | Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 | Metagenome | Rhizosphere |
| 134 | 8018150411 | Rhizobium straminoryzae SM12 | Isolate | Rhizosphere |
Type Distribution
| Type | Percentage (%) |
|---|---|
| Metagenomes | 95.78 |
| Metatranscriptomes | 0 |
| Isolates | 4.22 |
Biome Distribution
| Category | Percentage (%) |
|---|---|
| Aerial Root | 0 |
| Bulb | 0 |
| Endosphere | 8.43 |
| Nodule | 0 |
| Rhizoplane | 12.05 |
| Rhizosphere | 71.69 |
| Stem | 0 |
| Stem Tuber | 0 |
| Unclassified | 7.83 |
Taxonomy
Scaffolds
| Scaffold | Dataset | Taxonomy | Length | |
|---|---|---|---|---|
| 1 | Ga0068869_100294537 | 3300005334 | Bacteria | 1308 |
| 2 | Ga0070682_100079352 | 3300005337 | Bacteria | 2119 |
| 3 | Ga0068868_100004610 | 3300005338 | Bacteria | 9668 |
| 4 | Ga0070689_100089424 | 3300005340 | Bacteria | 2425 |
| 5 | Ga0070661_100039654 | 3300005344 | Bacteria | 3432 |
| 6 | Ga0070692_10005089 | 3300005345 | Bacteria | 5560 |
| 7 | Ga0070692_10029434 | 3300005345 | Bacteria | 2737 |
| 8 | Ga0070668_100203860 | 3300005347 | Bacteria | 1624 |
| 9 | Ga0070669_100188064 | 3300005353 | Bacteria | 1619 |
| 10 | Ga0070700_100213290 | 3300005441 | Bacteria | 1363 |
| 11 | Ga0070663_100016653 | 3300005455 | Bacteria | 4781 |
| 12 | Ga0070663_100054776 | 3300005455 | Bacteria | 2852 |
| 13 | Ga0070681_10809574 | 3300005458 | Bacteria | 854 |
| 14 | Ga0068867_100142057 | 3300005459 | Bacteria | 1878 |
| 15 | Ga0070685_10100628 | 3300005466 | Bacteria | 1764 |
| 16 | Ga0070707_100776103 | 3300005468 | Bacteria | 922 |
| 17 | Ga0068862_100055616 | 3300005844 | Bacteria | 3389 |
| 18 | Ga0070717_10770150 | 3300006028 | Bacteria | 875 |
| 19 | Ga0075363_100233773 | 3300006048 | Bacteria | 1056 |
| 20 | Ga0075364_10043680 | 3300006051 | Bacteria | 2914 |
| 21 | Ga0070716_100030276 | 3300006173 | Bacteria | 2934 |
| 22 | Ga0070712_100138042 | 3300006175 | Bacteria | 1857 |
| 23 | Ga0070712_100426699 | 3300006175 | Bacteria | 1100 |
| 24 | Ga0075367_10346926 | 3300006178 | Bacteria | 937 |
| 25 | Ga0075369_10005193 | 3300006186 | Bacteria | 4851 |
| 26 | Ga0075369_10021191 | 3300006186 | Bacteria | 2668 |
| 27 | Ga0099794_10009892 | 3300007265 | Bacteria | 4031 |
| 28 | Ga0099795_10006278 | 3300007788 | Bacteria | 3234 |
| 29 | Ga0099795_10028700 | 3300007788 | Bacteria | 1895 |
| 30 | Ga0105245_10014721 | 3300009098 | Bacteria | 6812 |
| 31 | Ga0105245_10187639 | 3300009098 | Bacteria | 1979 |
| 32 | Ga0105247_10339651 | 3300009101 | Bacteria | 1053 |
| 33 | Ga0114129_11049446 | 3300009147 | Bacteria | 1023 |
| 34 | Ga0105242_10983360 | 3300009176 | Bacteria | 850 |
| 35 | Ga0105249_10128300 | 3300009553 | Bacteria | 2418 |
| 36 | Ga0099796_10041059 | 3300010159 | Bacteria | 1565 |
| 37 | Ga0099796_10078715 | 3300010159 | Bacteria | 1204 |
| 38 | Ga0099796_10115833 | 3300010159 | Bacteria | 1025 |
| 39 | Ga0157369_10074016 | 3300013105 | Bacteria | 3653 |
| 40 | Ga0163162_11030504 | 3300013306 | Bacteria | 931 |
| 41 | Ga0157372_10285251 | 3300013307 | Bacteria | 1920 |
| 42 | Ga0157375_10291052 | 3300013308 | Bacteria | 1796 |
| 43 | Ga0157379_11251404 | 3300014968 | Bacteria | 715 |
| 44 | Ga0163161_10273098 | 3300017792 | Bacteria | 1323 |
| 45 | Ga0207642_10221054 | 3300025899 | Bacteria | 1058 |
| 46 | Ga0207645_10053749 | 3300025907 | Bacteria | 2573 |
| 47 | Ga0207705_10079486 | 3300025909 | Bacteria | 2388 |
| 48 | Ga0207684_10513259 | 3300025910 | Bacteria | 1027 |
| 49 | Ga0207657_10105420 | 3300025919 | Bacteria | 2334 |
| 50 | Ga0207646_10994257 | 3300025922 | Bacteria | 741 |
| 51 | Ga0207681_10377019 | 3300025923 | Bacteria | 1141 |
| 52 | Ga0207650_10192732 | 3300025925 | Bacteria | 1629 |
| 53 | Ga0207687_10129533 | 3300025927 | Bacteria | 1899 |
| 54 | Ga0207700_10516707 | 3300025928 | Bacteria | 1058 |
| 55 | Ga0207700_11176468 | 3300025928 | Bacteria | 685 |
| 56 | Ga0207670_10130138 | 3300025936 | Bacteria | 1842 |
| 57 | Ga0207689_10031242 | 3300025942 | Bacteria | 4435 |
| 58 | Ga0207661_10305955 | 3300025944 | Bacteria | 1426 |
| 59 | Ga0207712_10192238 | 3300025961 | Bacteria | 1612 |
| 60 | Ga0207678_10023195 | 3300026067 | Bacteria | 5428 |
| 61 | Ga0207708_10007437 | 3300026075 | Bacteria | 8097 |
| 62 | Ga0207675_100007502 | 3300026118 | Bacteria | 10303 |
| 63 | Ga0207683_10296172 | 3300026121 | Bacteria | 1480 |
| 64 | Ga0207698_10934739 | 3300026142 | Bacteria | 876 |
| 65 | Ga0209588_1015560 | 3300027671 | Bacteria | 2340 |
| 66 | Ga0307513_10109313 | 3300031456 | Unclassified | 2763 |
| 67 | Ga0307508_10000180 | 3300031616 | Bacteria | 76716 |
| 68 | Ga0307508_10261292 | 3300031616 | Bacteria | 1326 |
| 69 | Ga0265314_10045549 | 3300031711 | Bacteria | 3101 |
| 70 | Ga0307410_10502413 | 3300031852 | Bacteria | 998 |
| 71 | Ga0307406_10122578 | 3300031901 | Bacteria | 1810 |
| 72 | Ga0307407_10049795 | 3300031903 | Bacteria | 2393 |
| 73 | Ga0307409_100004148 | 3300031995 | Bacteria | 8064 |
| 74 | Ga0307409_100280483 | 3300031995 | Bacteria | 1540 |
| 75 | Ga0307416_100007932 | 3300032002 | Bacteria | 6797 |
| 76 | Ga0307416_101148083 | 3300032002 | Bacteria | 882 |
| 77 | Ga0307414_10105118 | 3300032004 | Bacteria | 2134 |
| 78 | Ga0307414_10380725 | 3300032004 | Bacteria | 1220 |
| 79 | Ga0307415_100007485 | 3300032126 | Bacteria | 5977 |
| 80 | Ga0373945_0262488 | 3300035116 | Bacteria | 732 |
| 81 | Ga0373943_0010319 | 3300035170 | Bacteria | 4190 |
| 82 | Ga0373943_0024404 | 3300035170 | Bacteria | 2819 |
| 83 | Ga0373931_0200215 | 3300035691 | Bacteria | 1193 |
| 84 | Ga0373935_0022012 | 3300035692 | Bacteria | 3904 |
| 85 | Ga0373935_0234203 | 3300035692 | Bacteria | 1280 |
| 86 | Ga0373927_0004092 | 3300035695 | Bacteria | 10274 |
| 87 | Ga0373947_0101235 | 3300035725 | Bacteria | 1811 |
| 88 | Ga0373947_0141302 | 3300035725 | Bacteria | 1544 |
| 89 | Ga0373947_0180689 | 3300035725 | Bacteria | 1373 |
| 90 | Ga0373925_0136065 | 3300037068 | Bacteria | 1920 |
| 91 | Ga0436364_0749300 | 3300037853 | Bacteria | 922 |
| 92 | Ga0436364_0793327 | 3300037853 | Bacteria | 914 |
| 93 | Ga0395901_0507021 | 3300038443 | Bacteria | 1228 |
| 94 | Ga0436365_0601201 | 3300039437 | Bacteria | 1186 |
| 95 | Ga0436365_0618907 | 3300039437 | Bacteria | 3711 |
| 96 | Ga0436360_0171574 | 3300039438 | Bacteria | 956 |
| 97 | Ga0436360_0454492 | 3300039438 | Bacteria | 2586 |
| 98 | Ga0436363_1104978 | 3300039450 | Bacteria | 874 |
| 99 | Ga0436362_1018140 | 3300039453 | Bacteria | 1701 |
| 100 | Ga0450901_013686 | 3300042533 | Bacteria | 850 |
| 101 | Ga0466972_0041967 | 3300044658 | Bacteria | 2226 |
| 102 | Ga0466965_0154219 | 3300044683 | Bacteria | 1202 |
| 103 | Ga0466961_0034007 | 3300044693 | Bacteria | 3274 |
| 104 | Ga0466970_0071403 | 3300044765 | Bacteria | 1867 |
| 105 | Ga0466960_0139403 | 3300044901 | Bacteria | 1287 |
| 106 | Ga0466960_0154446 | 3300044901 | Bacteria | 1228 |
| 107 | Ga0495629_0261835 | 3300046459 | Bacteria | 1189 |
| 108 | Ga0495653_0453948 | 3300046463 | Bacteria | 806 |
| 109 | Ga0495580_0311077 | 3300046472 | Bacteria | 1072 |
| 110 | Ga0495628_0393947 | 3300046516 | Bacteria | 1013 |
| 111 | Ga0495630_0119104 | 3300046517 | Bacteria | 2002 |
| 112 | Ga0495630_0134345 | 3300046517 | Bacteria | 1880 |
| 113 | Ga0495640_0041727 | 3300046533 | Bacteria | 3205 |
| 114 | Ga0495640_0078800 | 3300046533 | Bacteria | 2194 |
| 115 | Ga0495667_0291147 | 3300046559 | Bacteria | 1035 |
| 116 | Ga0495581_0091418 | 3300047315 | Bacteria | 1766 |
| 117 | Ga0495674_0068402 | 3300047319 | Bacteria | 3074 |
| 118 | Ga0495614_0108486 | 3300048089 | Bacteria | 1218 |
| 119 | Ga0496100_0174246 | 3300048903 | Bacteria | 1552 |
| 120 | Ga0496101_0124284 | 3300048904 | Bacteria | 1954 |
| 121 | Ga0496102_0064383 | 3300048905 | Bacteria | 3358 |
| 122 | Ga0496102_0452506 | 3300048905 | Bacteria | 1204 |
| 123 | Ga0496104_0639935 | 3300048907 | Bacteria | 972 |
| 124 | Ga0496105_0021628 | 3300048908 | Bacteria | 5206 |
| 125 | Ga0496105_0238022 | 3300048908 | Bacteria | 1478 |
| 126 | Ga0496105_0573920 | 3300048908 | Bacteria | 878 |
| 127 | Ga0496108_0228764 | 3300048911 | Bacteria | 1617 |
| 128 | Ga0496108_0604695 | 3300048911 | Bacteria | 955 |
| 129 | Ga0496109_0065731 | 3300048912 | Bacteria | 3320 |
| 130 | Ga0496109_0187360 | 3300048912 | Bacteria | 1944 |
| 131 | Ga0496110_0447630 | 3300048913 | Bacteria | 1177 |
| 132 | Ga0496111_0383080 | 3300048914 | Bacteria | 1040 |
| 133 | Ga0496112_0016649 | 3300048915 | Bacteria | 6893 |
| 134 | Ga0496112_0323147 | 3300048915 | Bacteria | 1487 |
| 135 | Ga0496113_0314820 | 3300048916 | Bacteria | 1254 |
| 136 | Ga0496113_0448711 | 3300048916 | Bacteria | 1036 |
| 137 | Ga0496115_0736371 | 3300048918 | Bacteria | 772 |
| 138 | Ga0496124_0004201 | 3300048927 | Bacteria | 16955 |
| 139 | Ga0501032_0078040 | 3300049569 | Bacteria | 2205 |
| 140 | Ga0501034_0730435 | 3300049571 | Bacteria | 887 |
| 141 | Ga0501038_0232789 | 3300049574 | Bacteria | 1465 |
| 142 | Ga0501073_0117048 | 3300049589 | Bacteria | 1847 |
| 143 | Ga0501074_0410658 | 3300049590 | Bacteria | 960 |
| 144 | nmdc:mga03683_7298_c1 | 3300050489 | Bacteria | 3830 |
| 145 | nmdc:mga03683_86651_c1 | 3300050489 | Bacteria | 1360 |
| 146 | nmdc:mga0yw44_353_c3 | 3300050492 | Bacteria | 9369 |
| 147 | nmdc:mga06z11_72186_c1 | 3300050494 | Bacteria | 1829 |
| 148 | nmdc:mga0n895_476359_c1 | 3300050512 | Bacteria | 1259 |
| 149 | nmdc:mga08x19_5991_c1 | 3300050514 | Bacteria | 7189 |
| 150 | nmdc:mga0sz30_18965_c1 | 3300050516 | Bacteria | 2758 |
| 151 | Ga0495601_0006281 | 3300053077 | Bacteria | 6941 |
| 152 | Ga0495601_0091423 | 3300053077 | Bacteria | 1959 |
| 153 | Ga0495595_0033033 | 3300053084 | Bacteria | 2333 |
| 154 | Ga0495619_0016566 | 3300053085 | Bacteria | 4666 |
| 155 | Ga0500595_022879 | 3300053119 | Bacteria | 2203 |
| 156 | Ga0500618_007327 | 3300053125 | Bacteria | 3156 |
| 157 | Ga0500658_0154275 | 3300053134 | Bacteria | 1037 |
| 158 | Ga0500616_0000923 | 3300053153 | Bacteria | 32124 |
| 159 | Ga0466962_0003251 | 3300061719 | Bacteria | 7720 |
Family Sequences
| Sample | Scaffold | Protein | Protein Length | |
|---|---|---|---|---|
| 1 | 3300047319 | Ga0495674_0068402 | Ga0495674_0068402_1026_1586 | 181 |
| 2 | 3300005455 | Ga0070663_100016653 | Ga0070663_1000166533 | 189 |
| 3 | 3300026067 | Ga0207678_10023195 | Ga0207678_100231953 | 189 |
| 4 | 3300046459 | Ga0495629_0261835 | Ga0495629_0261835_202_834 | 189 |
| 5 | 3300048907 | Ga0496104_0639935 | Ga0496104_0639935_30_686 | 197 |
| 6 | 3300048908 | Ga0496105_0021628 | Ga0496105_0021628_4340_4996 | 197 |
| 7 | 3300048918 | Ga0496115_0736371 | Ga0496115_0736371_32_688 | 197 |
| 8 | 3300007788 | Ga0099795_10028700 | Ga0099795_100287002 | 200 |
| 9 | 3300010159 | Ga0099796_10041059 | Ga0099796_100410592 | 200 |
| 10 | iso_pu_bacteria | 2928142448 | 2928144418 | 203 |
| 11 | 3300013306 | Ga0163162_11030504 | Ga0163162_110305042 | 205 |
| 12 | 3300031616 | Ga0307508_10000180 | Ga0307508_100001808 | 205 |
| 13 | iso_pu_bacteria | 2599185156 | 2599334673 | 205 |
| 14 | iso_pu_bacteria | 2842922631 | 2842925797 | 205 |
| 15 | iso_pu_bacteria | 2915358134 | 2915365126 | 205 |
| 16 | 3300009098 | Ga0105245_10014721 | Ga0105245_100147212 | 206 |
| 17 | 3300025927 | Ga0207687_10129533 | Ga0207687_101295332 | 206 |
| 18 | 3300031852 | Ga0307410_10502413 | Ga0307410_105024132 | 206 |
| 19 | 3300031901 | Ga0307406_10122578 | Ga0307406_101225782 | 206 |
| 20 | 3300031903 | Ga0307407_10049795 | Ga0307407_100497952 | 206 |
| 21 | 3300031995 | Ga0307409_100004148 | Ga0307409_1000041482 | 206 |
| 22 | 3300031995 | Ga0307409_100280483 | Ga0307409_1002804832 | 206 |
| 23 | 3300032002 | Ga0307416_100007932 | Ga0307416_1000079324 | 206 |
| 24 | 3300032002 | Ga0307416_101148083 | Ga0307416_1011480832 | 206 |
| 25 | 3300032004 | Ga0307414_10380725 | Ga0307414_103807252 | 206 |
| 26 | 3300032126 | Ga0307415_100007485 | Ga0307415_1000074852 | 206 |
| 27 | 3300035691 | Ga0373931_0200215 | Ga0373931_0200215_331_954 | 206 |
| 28 | 3300042533 | Ga0450901_013686 | Ga0450901_013686_47_667 | 206 |
| 29 | 3300044658 | Ga0466972_0041967 | Ga0466972_0041967_1180_1803 | 206 |
| 30 | 3300044683 | Ga0466965_0154219 | Ga0466965_0154219_231_854 | 206 |
| 31 | 3300044693 | Ga0466961_0034007 | Ga0466961_0034007_2079_2702 | 206 |
| 32 | 3300044765 | Ga0466970_0071403 | Ga0466970_0071403_491_1114 | 206 |
| 33 | 3300044901 | Ga0466960_0139403 | Ga0466960_0139403_424_1044 | 206 |
| 34 | 3300050489 | nmdc:mga03683_7298_c1 | nmdc:mga03683_7298_c1_2039_2662 | 206 |
| 35 | 3300061719 | Ga0466962_0003251 | Ga0466962_0003251_6115_6738 | 206 |
| 36 | iso_pu_bacteria | 8018150411 | 8018153456 | 206 |
| 37 | 3300006048 | Ga0075363_100233773 | Ga0075363_1002337732 | 207 |
| 38 | 3300006051 | Ga0075364_10043680 | Ga0075364_100436802 | 207 |
| 39 | 3300006173 | Ga0070716_100030276 | Ga0070716_1000302763 | 207 |
| 40 | 3300007265 | Ga0099794_10009892 | Ga0099794_100098922 | 207 |
| 41 | 3300010159 | Ga0099796_10078715 | Ga0099796_100787151 | 207 |
| 42 | 3300027671 | Ga0209588_1015560 | Ga0209588_10155603 | 207 |
| 43 | 3300031616 | Ga0307508_10261292 | Ga0307508_102612922 | 207 |
| 44 | 3300035170 | Ga0373943_0024404 | Ga0373943_0024404_1405_2034 | 207 |
| 45 | 3300035695 | Ga0373927_0004092 | Ga0373927_0004092_6550_7179 | 207 |
| 46 | 3300035725 | Ga0373947_0101235 | Ga0373947_0101235_910_1539 | 207 |
| 47 | 3300037068 | Ga0373925_0136065 | Ga0373925_0136065_234_863 | 207 |
| 48 | 3300039437 | Ga0436365_0601201 | Ga0436365_0601201_235_858 | 207 |
| 49 | 3300039438 | Ga0436360_0454492 | Ga0436360_0454492_1344_1970 | 207 |
| 50 | 3300039453 | Ga0436362_1018140 | Ga0436362_1018140_390_1016 | 207 |
| 51 | 3300044901 | Ga0466960_0154446 | Ga0466960_0154446_379_1002 | 207 |
| 52 | 3300053119 | Ga0500595_022879 | Ga0500595_022879_1051_1677 | 207 |
| 53 | iso_pu_bacteria | 2919450847 | 2919451820 | 207 |
| 54 | 3300005441 | Ga0070700_100213290 | Ga0070700_1002132901 | 208 |
| 55 | 3300005458 | Ga0070681_10809574 | Ga0070681_108095742 | 208 |
| 56 | 3300005468 | Ga0070707_100776103 | Ga0070707_1007761032 | 208 |
| 57 | 3300006028 | Ga0070717_10770150 | Ga0070717_107701502 | 208 |
| 58 | 3300006178 | Ga0075367_10346926 | Ga0075367_103469262 | 208 |
| 59 | 3300006186 | Ga0075369_10005193 | Ga0075369_100051933 | 208 |
| 60 | 3300006186 | Ga0075369_10021191 | Ga0075369_100211912 | 208 |
| 61 | 3300009147 | Ga0114129_11049446 | Ga0114129_110494462 | 208 |
| 62 | 3300010159 | Ga0099796_10115833 | Ga0099796_101158332 | 208 |
| 63 | 3300025910 | Ga0207684_10513259 | Ga0207684_105132591 | 208 |
| 64 | 3300025922 | Ga0207646_10994257 | Ga0207646_109942571 | 208 |
| 65 | 3300031456 | Ga0307513_10109313 | Ga0307513_101093134 | 208 |
| 66 | 3300035692 | Ga0373935_0022012 | Ga0373935_0022012_776_1408 | 208 |
| 67 | 3300035725 | Ga0373947_0180689 | Ga0373947_0180689_702_1334 | 208 |
| 68 | 3300046533 | Ga0495640_0041727 | Ga0495640_0041727_1620_2252 | 208 |
| 69 | 3300049569 | Ga0501032_0078040 | Ga0501032_0078040_1068_1697 | 208 |
| 70 | 3300049574 | Ga0501038_0232789 | Ga0501038_0232789_545_1174 | 208 |
| 71 | 3300049589 | Ga0501073_0117048 | Ga0501073_0117048_704_1333 | 208 |
| 72 | 3300050489 | nmdc:mga03683_86651_c1 | nmdc:mga03683_86651_c1_197_829 | 208 |
| 73 | 3300050492 | nmdc:mga0yw44_353_c3 | nmdc:mga0yw44_353_c3_5377_6009 | 208 |
| 74 | 3300050494 | nmdc:mga06z11_72186_c1 | nmdc:mga06z11_72186_c1_325_957 | 208 |
| 75 | 3300050516 | nmdc:mga0sz30_18965_c1 | nmdc:mga0sz30_18965_c1_1543_2175 | 208 |
| 76 | 3300053153 | Ga0500616_0000923 | Ga0500616_0000923_18407_19039 | 208 |
| 77 | 3300005345 | Ga0070692_10005089 | Ga0070692_100050895 | 209 |
| 78 | 3300006175 | Ga0070712_100138042 | Ga0070712_1001380422 | 209 |
| 79 | 3300006175 | Ga0070712_100426699 | Ga0070712_1004266992 | 209 |
| 80 | 3300007788 | Ga0099795_10006278 | Ga0099795_100062783 | 209 |
| 81 | 3300009101 | Ga0105247_10339651 | Ga0105247_103396512 | 209 |
| 82 | 3300014968 | Ga0157379_11251404 | Ga0157379_112514041 | 209 |
| 83 | 3300025928 | Ga0207700_10516707 | Ga0207700_105167072 | 209 |
| 84 | 3300025928 | Ga0207700_11176468 | Ga0207700_111764681 | 209 |
| 85 | 3300031711 | Ga0265314_10045549 | Ga0265314_100455493 | 209 |
| 86 | 3300032004 | Ga0307414_10105118 | Ga0307414_101051182 | 209 |
| 87 | 3300035116 | Ga0373945_0262488 | Ga0373945_0262488_52_687 | 209 |
| 88 | 3300035170 | Ga0373943_0010319 | Ga0373943_0010319_1954_2598 | 209 |
| 89 | 3300035692 | Ga0373935_0234203 | Ga0373935_0234203_511_1146 | 209 |
| 90 | 3300035725 | Ga0373947_0141302 | Ga0373947_0141302_10_654 | 209 |
| 91 | 3300037853 | Ga0436364_0749300 | Ga0436364_0749300_234_881 | 209 |
| 92 | 3300037853 | Ga0436364_0793327 | Ga0436364_0793327_164_799 | 209 |
| 93 | 3300038443 | Ga0395901_0507021 | Ga0395901_0507021_54_719 | 209 |
| 94 | 3300039437 | Ga0436365_0618907 | Ga0436365_0618907_294_929 | 209 |
| 95 | 3300039438 | Ga0436360_0171574 | Ga0436360_0171574_137_772 | 209 |
| 96 | 3300039450 | Ga0436363_1104978 | Ga0436363_1104978_188_823 | 209 |
| 97 | 3300046463 | Ga0495653_0453948 | Ga0495653_0453948_145_780 | 209 |
| 98 | 3300046472 | Ga0495580_0311077 | Ga0495580_0311077_101_745 | 209 |
| 99 | 3300046516 | Ga0495628_0393947 | Ga0495628_0393947_332_967 | 209 |
| 100 | 3300046517 | Ga0495630_0119104 | Ga0495630_0119104_239_883 | 209 |
| 101 | 3300046517 | Ga0495630_0134345 | Ga0495630_0134345_705_1340 | 209 |
| 102 | 3300046533 | Ga0495640_0078800 | Ga0495640_0078800_1514_2158 | 209 |
| 103 | 3300046559 | Ga0495667_0291147 | Ga0495667_0291147_255_890 | 209 |
| 104 | 3300047315 | Ga0495581_0091418 | Ga0495581_0091418_442_1086 | 209 |
| 105 | 3300048089 | Ga0495614_0108486 | Ga0495614_0108486_133_765 | 209 |
| 106 | 3300048903 | Ga0496100_0174246 | Ga0496100_0174246_887_1534 | 209 |
| 107 | 3300048904 | Ga0496101_0124284 | Ga0496101_0124284_25_660 | 209 |
| 108 | 3300048905 | Ga0496102_0064383 | Ga0496102_0064383_378_1013 | 209 |
| 109 | 3300048905 | Ga0496102_0452506 | Ga0496102_0452506_309_944 | 209 |
| 110 | 3300048908 | Ga0496105_0238022 | Ga0496105_0238022_51_686 | 209 |
| 111 | 3300048908 | Ga0496105_0573920 | Ga0496105_0573920_15_707 | 209 |
| 112 | 3300048911 | Ga0496108_0228764 | Ga0496108_0228764_17_652 | 209 |
| 113 | 3300048911 | Ga0496108_0604695 | Ga0496108_0604695_156_791 | 209 |
| 114 | 3300048912 | Ga0496109_0187360 | Ga0496109_0187360_135_770 | 209 |
| 115 | 3300048913 | Ga0496110_0447630 | Ga0496110_0447630_183_818 | 209 |
| 116 | 3300048915 | Ga0496112_0016649 | Ga0496112_0016649_2322_2957 | 209 |
| 117 | 3300048915 | Ga0496112_0323147 | Ga0496112_0323147_149_784 | 209 |
| 118 | 3300048916 | Ga0496113_0314820 | Ga0496113_0314820_235_891 | 209 |
| 119 | 3300048916 | Ga0496113_0448711 | Ga0496113_0448711_84_719 | 209 |
| 120 | 3300048927 | Ga0496124_0004201 | Ga0496124_0004201_12291_12923 | 209 |
| 121 | 3300049571 | Ga0501034_0730435 | Ga0501034_0730435_245_877 | 209 |
| 122 | 3300049590 | Ga0501074_0410658 | Ga0501074_0410658_76_708 | 209 |
| 123 | 3300050512 | nmdc:mga0n895_476359_c1 | nmdc:mga0n895_476359_c1_554_1189 | 209 |
| 124 | 3300050514 | nmdc:mga08x19_5991_c1 | nmdc:mga08x19_5991_c1_3687_4322 | 209 |
| 125 | 3300053077 | Ga0495601_0006281 | Ga0495601_0006281_450_1094 | 209 |
| 126 | 3300053077 | Ga0495601_0091423 | Ga0495601_0091423_229_864 | 209 |
| 127 | 3300053084 | Ga0495595_0033033 | Ga0495595_0033033_389_1024 | 209 |
| 128 | 3300053085 | Ga0495619_0016566 | Ga0495619_0016566_194_829 | 209 |
| 129 | 3300053125 | Ga0500618_007327 | Ga0500618_007327_335_973 | 209 |
| 130 | 3300053134 | Ga0500658_0154275 | Ga0500658_0154275_198_833 | 209 |
| 131 | iso_pu_bacteria | 2828305725 | 2828307815 | 209 |
| 132 | 3300009176 | Ga0105242_10983360 | Ga0105242_109833601 | 210 |
| 133 | 3300005334 | Ga0068869_100294537 | Ga0068869_1002945372 | 211 |
| 134 | 3300005337 | Ga0070682_100079352 | Ga0070682_1000793522 | 211 |
| 135 | 3300005338 | Ga0068868_100004610 | Ga0068868_10000461010 | 211 |
| 136 | 3300005340 | Ga0070689_100089424 | Ga0070689_1000894242 | 211 |
| 137 | 3300005344 | Ga0070661_100039654 | Ga0070661_1000396541 | 211 |
| 138 | 3300005345 | Ga0070692_10029434 | Ga0070692_100294342 | 211 |
| 139 | 3300005347 | Ga0070668_100203860 | Ga0070668_1002038602 | 211 |
| 140 | 3300005353 | Ga0070669_100188064 | Ga0070669_1001880642 | 211 |
| 141 | 3300005455 | Ga0070663_100054776 | Ga0070663_1000547763 | 211 |
| 142 | 3300005459 | Ga0068867_100142057 | Ga0068867_1001420572 | 211 |
| 143 | 3300005466 | Ga0070685_10100628 | Ga0070685_101006282 | 211 |
| 144 | 3300005844 | Ga0068862_100055616 | Ga0068862_1000556162 | 211 |
| 145 | 3300009098 | Ga0105245_10187639 | Ga0105245_101876392 | 211 |
| 146 | 3300009553 | Ga0105249_10128300 | Ga0105249_101283002 | 211 |
| 147 | 3300013105 | Ga0157369_10074016 | Ga0157369_100740163 | 211 |
| 148 | 3300013307 | Ga0157372_10285251 | Ga0157372_102852511 | 211 |
| 149 | 3300013308 | Ga0157375_10291052 | Ga0157375_102910522 | 211 |
| 150 | 3300017792 | Ga0163161_10273098 | Ga0163161_102730982 | 211 |
| 151 | 3300025899 | Ga0207642_10221054 | Ga0207642_102210542 | 211 |
| 152 | 3300025907 | Ga0207645_10053749 | Ga0207645_100537492 | 211 |
| 153 | 3300025909 | Ga0207705_10079486 | Ga0207705_100794862 | 211 |
| 154 | 3300025919 | Ga0207657_10105420 | Ga0207657_101054202 | 211 |
| 155 | 3300025923 | Ga0207681_10377019 | Ga0207681_103770192 | 211 |
| 156 | 3300025925 | Ga0207650_10192732 | Ga0207650_101927322 | 211 |
| 157 | 3300025936 | Ga0207670_10130138 | Ga0207670_101301382 | 211 |
| 158 | 3300025942 | Ga0207689_10031242 | Ga0207689_100312424 | 211 |
| 159 | 3300025944 | Ga0207661_10305955 | Ga0207661_103059552 | 211 |
| 160 | 3300025961 | Ga0207712_10192238 | Ga0207712_101922382 | 211 |
| 161 | 3300026075 | Ga0207708_10007437 | Ga0207708_100074373 | 211 |
| 162 | 3300026118 | Ga0207675_100007502 | Ga0207675_1000075029 | 211 |
| 163 | 3300026121 | Ga0207683_10296172 | Ga0207683_102961722 | 211 |
| 164 | 3300026142 | Ga0207698_10934739 | Ga0207698_109347391 | 211 |
| 165 | 3300048912 | Ga0496109_0065731 | Ga0496109_0065731_590_1225 | 211 |
| 166 | 3300048914 | Ga0496111_0383080 | Ga0496111_0383080_319_954 | 211 |
Functional Annotation
PFAM ID
Name
Description
Start Position
End Position
Accuracy
Structural Annotation
Top 5 Hits
| ID | Description | Score | Start | End |
|---|---|---|---|---|
| 1f2v-assembly1.cif.gz_A | crystal structure analysis of precorrin-8x methylmutase of aerobic vitamin b12 synthesis | 0.9907 | 4 | 206 |
| 4au1-assembly1.cif.gz_A | crystal structure of cobh (precorrin-8x methyl mutase) complexed with c5 desmethyl-hba | 0.9882 | 4 | 209 |
| 3e7d-assembly1.cif.gz_A | crystal structure of precorrin-8x methyl mutase cbic/cobh from brucella melitensis | 0.9875 | 6 | 205 |
| 5n0g-assembly1.cif.gz_A-2 | crystal structure of cobh t85a (precorrin-8x methyl mutase) complexed with c5 allyl-hba | 0.9871 | 4 | 209 |
| 4au1-assembly1.cif.gz_A | crystal structure of cobh (precorrin-8x methyl mutase) complexed with c5 desmethyl-hba | 0.9741 | 4 | 209 |
| ID | Description | Score | Start | End | Superfamily |
|---|---|---|---|---|---|
| 3e7dD00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase | 0.9885 | 6 | 208 | 3.40.50.10230 |
| 3e7dD00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase | 0.979 | 6 | 208 | 3.40.50.10230 |
| 1v9cA00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase | 0.9225 | 13 | 204 | 3.40.50.10230 |
| 2afvB00 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase | 0.9095 | 3 | 208 | 3.40.50.10230 |
| af_Q58340_4_210_3.40.50.10230 | Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Cobalamin biosynthesis CobH/CbiC, precorrin-8X methylmutase | 0.9069 | 6 | 204 | 3.40.50.10230 |
| ID | Description | Score | Start | End | GO Terms |
|---|---|---|---|---|---|
| AF-A0A511DQT6-F1-model_v4 | Precorrin-8X methylmutase | 0.9991 | 42 | 209 |
GO:0009236
GO:0016993 |
| AF-A0A6G3X8A9-F1-model_v4 | Precorrin-8X methylmutase (EC 5.4.99.61) | 0.9988 | 62 | 180 |
GO:0009236
GO:0016993 |
| AF-A0A6G2Y3G0-F1-model_v4 | deleted | 0.9988 | 2 | 96 |
|
| AF-A0A149UQA8-F1-model_v4 | deleted | 0.9979 | 108 | 209 |
|
| AF-A0A149RZR5-F1-model_v4 | deleted | 0.9973 | 7 | 209 |
|
Predicted Structure (AlphaFold2)
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