F244835

General Info

Members Datasets Scaffolds Average Seq Length
164 108 158 248

Family's Representative Sequence

Representative Sequence 3300049589|Ga0501073_0361556|Ga0501073_0361556_137_967
Length 276
Sequence MDVMFADCASRSFTEPAPAPAAKVDPVMESLAGLEGMAAPAKAKRSPLAAYAADLDLRFLGMNTSKILSTAIRDLFPGRIAVVSSFGAEAAIVLQLVAEIDPSVPVIFLETGKHFDATLMYRDILSQRFGLTDLRSIEPDAAEVAAEDPDGDLWSRDPNRCCALRKVRPLERALKGFDAWITGRKRYHGAERSALPFAEASNGQIKINPLASWTSADVQAAFKRYRLPQHPLFDEGYASIGCAPCTRPIQAGENARDGRWAGTDKRECGIHLDYQI

Samples

Sample ID Description Type Environment
1 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
2 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
3 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
4 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
5 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
6 2883354860 Hypericibacter adhaerens R5959 Isolate Rhizosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
9 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
10 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
14 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
18 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
19 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
22 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
23 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
24 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
25 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
28 3300009988 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_233 metaG Metagenome Rhizosphere
29 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
30 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
31 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
32 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
33 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
34 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
35 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
36 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
46 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
49 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
50 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
51 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
52 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
53 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
54 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
55 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
56 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
57 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
58 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
59 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
60 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
61 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
62 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
63 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
64 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
65 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
66 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
67 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
68 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
69 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
70 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
71 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
72 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
73 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
74 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
75 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
76 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
77 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
78 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
79 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
80 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
81 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
82 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
83 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
84 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
85 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
86 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
87 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
88 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
89 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
90 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
91 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
92 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
93 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
94 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
95 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
96 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
97 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
98 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
99 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
100 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
101 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
102 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
103 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
104 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
105 3300053736 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 endosphere Metagenome Endosphere
106 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
107 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
108 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.34
Metatranscriptomes 0
Isolates 3.66

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 22.56
Nodule 0
Rhizoplane 0
Rhizosphere 68.29
Stem 0
Stem Tuber 0
Unclassified 9.15

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10000138 3300003215 Bacteria 75653
2 rootH1_10022633 3300003316 Bacteria 1526
3 Ga0055531_10015242 3300003794 Bacteria 3403
4 Ga0070658_10212695 3300005327 Bacteria 1634
5 Ga0070673_100250038 3300005364 Bacteria 1545
6 Ga0070705_100160538 3300005440 Bacteria 1502
7 Ga0070694_100005097 3300005444 Bacteria 7922
8 Ga0070706_100029945 3300005467 Bacteria 5013
9 Ga0070695_100154384 3300005545 Bacteria 1605
10 Ga0070665_100004803 3300005548 Bacteria 14048
11 Ga0070665_100005784 3300005548 Bacteria 12687
12 Ga0070665_100205278 3300005548 Bacteria 1971
13 Ga0070665_100757529 3300005548 Bacteria 984
14 Ga0068857_100258706 3300005577 Bacteria 1597
15 Ga0068862_100006912 3300005844 Bacteria 9410
16 Ga0068862_100012557 3300005844 Bacteria 7012
17 Ga0081455_10002830 3300005937 Bacteria 20425
18 Ga0081455_10018432 3300005937 Bacteria 6651
19 Ga0081539_10001822 3300005985 Bacteria 33628
20 Ga0075365_10321838 3300006038 Bacteria 1089
21 Ga0075363_100372926 3300006048 Bacteria 836
22 Ga0075362_10067265 3300006177 Bacteria 1630
23 Ga0075362_10132666 3300006177 Bacteria 1186
24 Ga0075367_10312750 3300006178 Bacteria 989
25 Ga0075369_10001244 3300006186 Bacteria 8648
26 Ga0075369_10039899 3300006186 Bacteria 2006
27 Ga0075366_10013336 3300006195 Bacteria 4677
28 Ga0105240_10009497 3300009093 Bacteria 13772
29 Ga0105035_105155 3300009988 Unclassified 1053
30 Ga0157373_10004481 3300013100 Bacteria 10517
31 Ga0157373_10004489 3300013100 Bacteria 10503
32 Ga0182007_10015964 3300015262 Bacteria 2784
33 Ga0213872_10008384 3300021361 Bacteria 5004
34 Ga0213876_10000168 3300021384 Bacteria 69226
35 Ga0213876_10037623 3300021384 Bacteria 2553
36 Ga0209026_1006038 3300025250 Bacteria 3080
37 Ga0209758_1000028 3300025297 Bacteria 530102
38 Ga0209051_1035936 3300025303 Bacteria 1836
39 Ga0209257_1000114 3300025304 Bacteria 233013
40 Ga0207684_10102989 3300025910 Bacteria 2441
41 Ga0207695_10435427 3300025913 Bacteria 1195
42 Ga0207679_10003408 3300025945 Bacteria 9806
43 Ga0207651_10312611 3300025960 Bacteria 1311
44 Ga0207668_10002668 3300025972 Bacteria 10437
45 Ga0207639_10125523 3300026041 Bacteria 2116
46 Ga0268266_10001895 3300028379 Bacteria 23574
47 Ga0268266_10052402 3300028379 Bacteria 3504
48 Ga0268266_10290292 3300028379 Bacteria 1523
49 Ga0268265_10005762 3300028380 Bacteria 8458
50 Ga0268265_10091049 3300028380 Bacteria 2438
51 Ga0265334_10042635 3300028573 Bacteria 1768
52 Ga0265318_10049206 3300028577 Bacteria 1586
53 Ga0265338_10009609 3300028800 Bacteria 11491
54 Ga0265340_10028026 3300031247 Bacteria 2835
55 Ga0265327_10000394 3300031251 Bacteria 81965
56 Ga0265327_10000933 3300031251 Bacteria 42834
57 Ga0265316_10030516 3300031344 Bacteria 4417
58 Ga0307513_10004304 3300031456 Bacteria 19024
59 Ga0307513_10396888 3300031456 Bacteria 1115
60 Ga0307516_10000539 3300031730 Bacteria 50564
61 Ga0307416_100407666 3300032002 Bacteria 1399
62 Ga0307414_10179456 3300032004 Bacteria 1701
63 Ga0307414_10697299 3300032004 Bacteria 919
64 Ga0436365_0232830 3300039437 Bacteria 7028
65 Ga0436365_1053358 3300039437 Bacteria 69298
66 Ga0436360_0130330 3300039438 Bacteria 4642
67 Ga0436360_0320340 3300039438 Bacteria 5293
68 Ga0436361_0208451 3300039447 Bacteria 3319
69 Ga0436361_0778597 3300039447 Bacteria 8376
70 Ga0436363_1274042 3300039450 Bacteria 5264
71 Ga0451577_0192039 3300042876 Bacteria 1842
72 Ga0495642_0082151 3300046528 Bacteria 1358
73 Ga0495669_0000001 3300046684 Bacteria 291866
74 Ga0495677_0028675 3300047445 Bacteria 2023
75 Ga0495686_0058826 3300047472 Bacteria 2395
76 Ga0496126_0353201 3300048929 Bacteria 1202
77 Ga0501032_0002952 3300049569 Bacteria 13214
78 Ga0501032_0138729 3300049569 Bacteria 1602
79 Ga0501033_0003092 3300049570 Bacteria 13826
80 Ga0501033_0004094 3300049570 Bacteria 11758
81 Ga0501034_0020151 3300049571 Bacteria 6808
82 Ga0501034_0024267 3300049571 Bacteria 6167
83 Ga0501034_0081800 3300049571 Bacteria 3232
84 Ga0501034_0289229 3300049571 Bacteria 1577
85 Ga0501036_0002006 3300049572 Bacteria 15824
86 Ga0501037_0015374 3300049573 Bacteria 5632
87 Ga0501037_0092916 3300049573 Bacteria 2182
88 Ga0501038_0000308 3300049574 Bacteria 41640
89 Ga0501039_0281437 3300049575 Bacteria 1307
90 Ga0501043_0016296 3300049579 Bacteria 5828
91 Ga0501043_0172356 3300049579 Bacteria 1688
92 Ga0501043_0194010 3300049579 Bacteria 1579
93 Ga0501043_0385156 3300049579 Bacteria 1061
94 Ga0501046_0004392 3300049580 Bacteria 12813
95 Ga0501047_0033785 3300049581 Bacteria 4936
96 Ga0501047_0183940 3300049581 Bacteria 1955
97 Ga0501047_0686260 3300049581 Bacteria 842
98 Ga0501048_0143268 3300049582 Bacteria 1690
99 Ga0501067_0062182 3300049583 Bacteria 2067
100 Ga0501067_0232466 3300049583 Bacteria 1026
101 Ga0501068_0006023 3300049584 Bacteria 6660
102 Ga0501068_0036712 3300049584 Bacteria 2932
103 Ga0501069_0000411 3300049585 Bacteria 19421
104 Ga0501070_0006021 3300049586 Bacteria 10331
105 Ga0501070_0107565 3300049586 Bacteria 2305
106 Ga0501073_0002016 3300049589 Bacteria 15167
107 Ga0501073_0004758 3300049589 Bacteria 10188
108 Ga0501073_0017262 3300049589 Bacteria 5228
109 Ga0501073_0229117 3300049589 Bacteria 1284
110 Ga0501073_0361556 3300049589 Bacteria 1002
111 Ga0501074_0373353 3300049590 Bacteria 1012
112 Ga0501080_0000644 3300049742 Bacteria 27691
113 Ga0501080_0009149 3300049742 Bacteria 9018
114 Ga0501080_0159666 3300049742 Bacteria 2082
115 Ga0501083_0005630 3300049744 Bacteria 8869
116 Ga0501083_0006452 3300049744 Bacteria 8321
117 Ga0501083_0043353 3300049744 Bacteria 3048
118 Ga0501083_0053936 3300049744 Bacteria 2698
119 Ga0501035_0015716 3300049822 Bacteria 6985
120 Ga0501035_0236154 3300049822 Bacteria 1557
121 Ga0501044_0004049 3300049823 Bacteria 16444
122 Ga0501044_0006448 3300049823 Bacteria 12959
123 Ga0501044_0010857 3300049823 Bacteria 9882
124 Ga0501044_0077739 3300049823 Bacteria 3365
125 Ga0501044_0078500 3300049823 Bacteria 3345
126 Ga0501044_0209651 3300049823 Bacteria 1903
127 Ga0501044_0229669 3300049823 Bacteria 1804
128 Ga0501044_0339506 3300049823 Bacteria 1423
129 nmdc:mga03683_47753_c1 3300050489 Bacteria 1777
130 nmdc:mga06z11_416920_c1 3300050494 Bacteria 809
131 nmdc:mga0sz30_611_c1 3300050516 Bacteria 5519
132 Ga0500643_002178 3300053087 Bacteria 10366
133 Ga0500643_035337 3300053087 Bacteria 1499
134 Ga0500644_0025909 3300053088 Bacteria 1810
135 Ga0500583_0110478 3300053092 Bacteria 1354
136 Ga0500651_0021201 3300053093 Bacteria 4050
137 Ga0500641_0011578 3300053096 Bacteria 3203
138 Ga0500555_008877 3300053103 Bacteria 2869
139 Ga0500595_001105 3300053119 Bacteria 14963
140 Ga0500595_003780 3300053119 Bacteria 6967
141 Ga0500614_076519 3300053123 Bacteria 929
142 Ga0500642_0000312 3300053130 Bacteria 17022
143 Ga0500652_187709 3300053131 Bacteria 844
144 Ga0500658_0226667 3300053134 Bacteria 857
145 Ga0500588_0001317 3300053146 Bacteria 4673
146 Ga0500604_0003149 3300053151 Bacteria 4435
147 Ga0500616_0000388 3300053153 Bacteria 61251
148 Ga0500622_0166869 3300053156 Bacteria 1028
149 Ga0500609_000600 3300053731 Bacteria 5464
150 Ga0500609_009167 3300053731 Bacteria 1335
151 Ga0500599_005448 3300053736 Bacteria 1599
152 Ga0500587_007771 3300053739 Bacteria 1389
153 Ga0501084_0008182 3300054114 Bacteria 8627
154 Ga0501084_0307471 3300054114 Bacteria 1339
155 Ga0501082_0003390 3300060353 Bacteria 13908
156 Ga0501082_0027642 3300060353 Bacteria 4883
157 Ga0501082_0100820 3300060353 Bacteria 2497
158 Ga0501082_0244002 3300060353 Bacteria 1563

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003316 rootH1_10022633 rootH1_100226332 204
2 3300050494 nmdc:mga06z11_416920_c1 nmdc:mga06z11_416920_c1_24_665 205
3 3300005548 Ga0070665_100005784 Ga0070665_1000057843 225
4 3300028379 Ga0268266_10052402 Ga0268266_100524023 225
5 3300005548 Ga0070665_100004803 Ga0070665_1000048038 226
6 3300025960 Ga0207651_10312611 Ga0207651_103126111 226
7 3300028379 Ga0268266_10001895 Ga0268266_1000189514 226
8 3300049579 Ga0501043_0194010 Ga0501043_0194010_391_1083 226
9 3300049581 Ga0501047_0183940 Ga0501047_0183940_429_1121 226
10 3300049823 Ga0501044_0209651 Ga0501044_0209651_1019_1711 226
11 3300053088 Ga0500644_0025909 Ga0500644_0025909_656_1348 226
12 3300048929 Ga0496126_0353201 Ga0496126_0353201_318_1037 228
13 3300003794 Ga0055531_10015242 Ga0055531_100152422 230
14 3300006177 Ga0075362_10067265 Ga0075362_100672652 231
15 3300050489 nmdc:mga03683_47753_c1 nmdc:mga03683_47753_c1_814_1530 231
16 iso_pu_bacteria 2643221598 2643999344 231
17 iso_pu_bacteria 2643221614 2644085613 231
18 iso_pu_bacteria 2643221661 2644343164 231
19 iso_pu_bacteria 2643221666 2644366464 231
20 3300005937 Ga0081455_10002830 Ga0081455_1000283012 232
21 3300006038 Ga0075365_10321838 Ga0075365_103218382 232
22 3300006048 Ga0075363_100372926 Ga0075363_1003729261 232
23 3300006186 Ga0075369_10001244 Ga0075369_100012443 232
24 3300006186 Ga0075369_10039899 Ga0075369_100398992 232
25 3300009988 Ga0105035_105155 Ga0105035_1051552 232
26 3300039438 Ga0436360_0130330 Ga0436360_0130330_1317_2036 232
27 3300039447 Ga0436361_0208451 Ga0436361_0208451_253_972 232
28 3300050516 nmdc:mga0sz30_611_c1 nmdc:mga0sz30_611_c1_1559_2275 232
29 3300053731 Ga0500609_009167 Ga0500609_009167_573_1295 232
30 3300006178 Ga0075367_10312750 Ga0075367_103127502 234
31 3300006195 Ga0075366_10013336 Ga0075366_100133363 234
32 3300031456 Ga0307513_10004304 Ga0307513_1000430417 234
33 3300005577 Ga0068857_100258706 Ga0068857_1002587062 235
34 3300005937 Ga0081455_10018432 Ga0081455_100184327 235
35 3300015262 Ga0182007_10015964 Ga0182007_100159643 235
36 3300025250 Ga0209026_1006038 Ga0209026_10060383 235
37 3300031251 Ga0265327_10000933 Ga0265327_1000093336 235
38 3300032002 Ga0307416_100407666 Ga0307416_1004076662 235
39 3300032004 Ga0307414_10179456 Ga0307414_101794561 235
40 3300032004 Ga0307414_10697299 Ga0307414_106972992 235
41 3300049571 Ga0501034_0081800 Ga0501034_0081800_608_1345 235
42 3300049579 Ga0501043_0385156 Ga0501043_0385156_21_758 235
43 3300053093 Ga0500651_0021201 Ga0500651_0021201_1017_1724 235
44 3300005548 Ga0070665_100205278 Ga0070665_1002052783 236
45 3300005548 Ga0070665_100757529 Ga0070665_1007575292 236
46 3300005844 Ga0068862_100012557 Ga0068862_1000125571 236
47 3300009093 Ga0105240_10009497 Ga0105240_1000949711 236
48 3300013100 Ga0157373_10004481 Ga0157373_100044819 236
49 3300013100 Ga0157373_10004489 Ga0157373_100044899 236
50 3300021384 Ga0213876_10000168 Ga0213876_1000016835 236
51 3300025913 Ga0207695_10435427 Ga0207695_104354272 236
52 3300025945 Ga0207679_10003408 Ga0207679_100034088 236
53 3300025972 Ga0207668_10002668 Ga0207668_100026687 236
54 3300026041 Ga0207639_10125523 Ga0207639_101255233 236
55 3300028379 Ga0268266_10290292 Ga0268266_102902922 236
56 3300028380 Ga0268265_10091049 Ga0268265_100910491 236
57 3300028800 Ga0265338_10009609 Ga0265338_100096095 236
58 3300031730 Ga0307516_10000539 Ga0307516_1000053920 236
59 3300039437 Ga0436365_1053358 Ga0436365_1053358_34201_34947 236
60 3300039450 Ga0436363_1274042 Ga0436363_1274042_4459_5205 236
61 3300046528 Ga0495642_0082151 Ga0495642_0082151_210_950 236
62 3300046684 Ga0495669_0000001 Ga0495669_0000001_38957_39697 236
63 3300047445 Ga0495677_0028675 Ga0495677_0028675_295_1035 236
64 3300049570 Ga0501033_0004094 Ga0501033_0004094_1081_1821 236
65 3300049571 Ga0501034_0024267 Ga0501034_0024267_4882_5622 236
66 3300049573 Ga0501037_0015374 Ga0501037_0015374_3141_3881 236
67 3300049582 Ga0501048_0143268 Ga0501048_0143268_898_1638 236
68 3300049823 Ga0501044_0006448 Ga0501044_0006448_1934_2674 236
69 3300005467 Ga0070706_100029945 Ga0070706_1000299452 237
70 3300021384 Ga0213876_10037623 Ga0213876_100376232 237
71 3300025910 Ga0207684_10102989 Ga0207684_101029892 237
72 3300039437 Ga0436365_0232830 Ga0436365_0232830_6011_6742 237
73 3300049823 Ga0501044_0339506 Ga0501044_0339506_561_1298 237
74 3300053134 Ga0500658_0226667 Ga0500658_0226667_86_817 237
75 3300005327 Ga0070658_10212695 Ga0070658_102126952 238
76 3300028577 Ga0265318_10049206 Ga0265318_100492062 238
77 3300039438 Ga0436360_0320340 Ga0436360_0320340_4385_5131 238
78 3300021361 Ga0213872_10008384 Ga0213872_100083845 239
79 3300039447 Ga0436361_0778597 Ga0436361_0778597_1865_2614 239
80 3300005440 Ga0070705_100160538 Ga0070705_1001605381 242
81 3300005444 Ga0070694_100005097 Ga0070694_1000050973 242
82 3300005545 Ga0070695_100154384 Ga0070695_1001543841 242
83 3300028573 Ga0265334_10042635 Ga0265334_100426351 242
84 3300031247 Ga0265340_10028026 Ga0265340_100280263 242
85 3300031344 Ga0265316_10030516 Ga0265316_100305164 242
86 3300042876 Ga0451577_0192039 Ga0451577_0192039_444_1175 242
87 3300053092 Ga0500583_0110478 Ga0500583_0110478_155_913 243
88 3300053130 Ga0500642_0000312 Ga0500642_0000312_4440_5198 243
89 3300005985 Ga0081539_10001822 Ga0081539_1000182219 244
90 3300053119 Ga0500595_003780 Ga0500595_003780_5414_6187 244
91 3300053087 Ga0500643_002178 Ga0500643_002178_1319_2107 245
92 3300031251 Ga0265327_10000394 Ga0265327_1000039451 246
93 3300005364 Ga0070673_100250038 Ga0070673_1002500382 247
94 3300049569 Ga0501032_0138729 Ga0501032_0138729_329_1129 247
95 3300049571 Ga0501034_0289229 Ga0501034_0289229_705_1505 247
96 iso_pu_bacteria 2883291878 2883296441 249
97 3300025303 Ga0209051_1035936 Ga0209051_10359361 251
98 3300025304 Ga0209257_1000114 Ga0209257_100011414 251
99 3300049569 Ga0501032_0002952 Ga0501032_0002952_4555_5316 251
100 3300049570 Ga0501033_0003092 Ga0501033_0003092_744_1505 251
101 3300049571 Ga0501034_0020151 Ga0501034_0020151_5041_5802 251
102 3300049572 Ga0501036_0002006 Ga0501036_0002006_2431_3192 251
103 3300049574 Ga0501038_0000308 Ga0501038_0000308_12324_13085 251
104 3300049575 Ga0501039_0281437 Ga0501039_0281437_200_958 251
105 3300049579 Ga0501043_0016296 Ga0501043_0016296_2894_3655 251
106 3300049580 Ga0501046_0004392 Ga0501046_0004392_4334_5095 251
107 3300049581 Ga0501047_0033785 Ga0501047_0033785_2130_2891 251
108 3300049583 Ga0501067_0062182 Ga0501067_0062182_164_922 251
109 3300049584 Ga0501068_0006023 Ga0501068_0006023_1946_2707 251
110 3300049585 Ga0501069_0000411 Ga0501069_0000411_10665_11426 251
111 3300049586 Ga0501070_0006021 Ga0501070_0006021_607_1368 251
112 3300049589 Ga0501073_0002016 Ga0501073_0002016_4231_4992 251
113 3300049589 Ga0501073_0361556 Ga0501073_0361556_137_967 251
114 3300049742 Ga0501080_0000644 Ga0501080_0000644_11651_12412 251
115 3300049744 Ga0501083_0005630 Ga0501083_0005630_6107_6868 251
116 3300049744 Ga0501083_0053936 Ga0501083_0053936_1530_2360 251
117 3300049822 Ga0501035_0015716 Ga0501035_0015716_5431_6192 251
118 3300049822 Ga0501035_0236154 Ga0501035_0236154_137_901 251
119 3300049823 Ga0501044_0004049 Ga0501044_0004049_5133_5894 251
120 3300049823 Ga0501044_0078500 Ga0501044_0078500_1444_2208 251
121 3300054114 Ga0501084_0008182 Ga0501084_0008182_3449_4210 251
122 3300060353 Ga0501082_0003390 Ga0501082_0003390_2002_2763 251
123 3300060353 Ga0501082_0027642 Ga0501082_0027642_3835_4665 251
124 iso_pu_bacteria 2883354860 2883359136 251
125 3300003215 JGI25153J46596_10000138 JGI25153J46596_1000013829 252
126 3300005844 Ga0068862_100006912 Ga0068862_10000691210 252
127 3300006177 Ga0075362_10132666 Ga0075362_101326661 252
128 3300025297 Ga0209758_1000028 Ga0209758_1000028158 252
129 3300028380 Ga0268265_10005762 Ga0268265_100057623 252
130 3300031456 Ga0307513_10396888 Ga0307513_103968881 252
131 3300047472 Ga0495686_0058826 Ga0495686_0058826_392_1165 252
132 3300049573 Ga0501037_0092916 Ga0501037_0092916_1308_2066 252
133 3300049579 Ga0501043_0172356 Ga0501043_0172356_398_1156 252
134 3300049581 Ga0501047_0686260 Ga0501047_0686260_12_770 252
135 3300049583 Ga0501067_0232466 Ga0501067_0232466_172_930 252
136 3300049584 Ga0501068_0036712 Ga0501068_0036712_1854_2612 252
137 3300049586 Ga0501070_0107565 Ga0501070_0107565_1367_2125 252
138 3300049589 Ga0501073_0004758 Ga0501073_0004758_1942_2700 252
139 3300049589 Ga0501073_0017262 Ga0501073_0017262_2097_2864 252
140 3300049589 Ga0501073_0229117 Ga0501073_0229117_129_887 252
141 3300049590 Ga0501074_0373353 Ga0501074_0373353_20_787 252
142 3300049742 Ga0501080_0009149 Ga0501080_0009149_1644_2402 252
143 3300049742 Ga0501080_0159666 Ga0501080_0159666_857_1624 252
144 3300049744 Ga0501083_0006452 Ga0501083_0006452_4499_5257 252
145 3300049744 Ga0501083_0043353 Ga0501083_0043353_930_1697 252
146 3300049823 Ga0501044_0010857 Ga0501044_0010857_7005_7763 252
147 3300049823 Ga0501044_0077739 Ga0501044_0077739_2187_2945 252
148 3300049823 Ga0501044_0229669 Ga0501044_0229669_163_921 252
149 3300053087 Ga0500643_035337 Ga0500643_035337_110_868 252
150 3300053096 Ga0500641_0011578 Ga0500641_0011578_1371_2144 252
151 3300053103 Ga0500555_008877 Ga0500555_008877_887_1660 252
152 3300053119 Ga0500595_001105 Ga0500595_001105_4397_5170 252
153 3300053123 Ga0500614_076519 Ga0500614_076519_57_830 252
154 3300053131 Ga0500652_187709 Ga0500652_187709_75_833 252
155 3300053146 Ga0500588_0001317 Ga0500588_0001317_2300_3070 252
156 3300053151 Ga0500604_0003149 Ga0500604_0003149_2944_3702 252
157 3300053153 Ga0500616_0000388 Ga0500616_0000388_29537_30304 252
158 3300053156 Ga0500622_0166869 Ga0500622_0166869_165_938 252
159 3300053731 Ga0500609_000600 Ga0500609_000600_1963_2721 252
160 3300053736 Ga0500599_005448 Ga0500599_005448_242_1000 252
161 3300053739 Ga0500587_007771 Ga0500587_007771_509_1267 252
162 3300054114 Ga0501084_0307471 Ga0501084_0307471_386_1153 252
163 3300060353 Ga0501082_0100820 Ga0501082_0100820_1517_2275 252
164 3300060353 Ga0501082_0244002 Ga0501082_0244002_90_857 252

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01507

PAPS_reduct

Phosphoadenosine phosphosulfate reductase family

79

248

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
6vpu-assembly3.cif.gz_C 1.90 angstrom resolution crystal structure phosphoadenosine phosphosulfate reductase (cysh) from vibrio vulnificus 0.8645 19 220
7lhu-assembly2.cif.gz_B crystal structure of adenosine-5'-phosphosulfate reductase from mycobacterium tuberculosis in a complex with product amp 0.8592 19 226
7lhu-assembly2.cif.gz_B crystal structure of adenosine-5'-phosphosulfate reductase from mycobacterium tuberculosis in a complex with product amp 0.8516 19 226
7lhs-assembly2.cif.gz_B crystal structure of adenosine-5'-phosphosulfate reductase from mycobacterium tuberculosis in a complex with substrate aps 0.8485 19 226
2goy-assembly2.cif.gz_E crystal structure of assimilatory adenosine 5'-phosphosulfate reductase with bound aps 0.8467 27 237
ID Description Score Start End Superfamily
af_P9WIK3_10_254_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8604 21 247 3.40.50.620
2goyE00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8467 27 237 3.40.50.620
af_P17854_2_216_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8159 1 219 3.40.50.620
2oq2D00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8109 21 247 3.40.50.620
2goyE00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.805 27 237 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A529WRT8-F1-model_v4 deleted 0.9833 56 142
AF-B6R950-F1-model_v4 deleted 0.9747 25 146
AF-A0A529VUK8-F1-model_v4 Phosphoadenosine phosphosulfate reductase 0.9692 21 141 GO:0004604
GO:0005737
GO:0019379
AF-A0A2A2M3L5-F1-model_v4 Phosphoadenosine phosphosulphate reductase domain-containing protein 0.9682 32 151 GO:0004604
GO:0005737
GO:0019379
AF-A0A435DB92-F1-model_v4 deleted 0.958 20 175

Feature Viewer

pLDDT pTM Quality
85.54 0.84 High
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Predicted Structure (AlphaFold2)

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