F244730

General Info

Members Datasets Scaffolds Average Seq Length
164 126 328 209

Family's Representative Sequence

Representative Sequence 3300048917|Ga0496114_0102059|Ga0496114_0102059_843_1550
Length 227
Sequence MTSGGWATEDMARRAALEIPAGSIVNLGIGLPTQVADYLPEAHAWLHSENGLLGTGPFPFEGDEDPSLINAGKQTVTVLPGGSTFDSAQSFAMIRGGHVDLAILGAMQVSAGGDLANWAVPGGKVMGIGGAMDLASGCRRVIAMMQHVTKKGEHKLVARCDYPLTATRVVSLVITELGAFEPSGHGFRIVELAPGVTRACGRRDRRPAARSVVGRGLGRAQGLLELA

Samples

Sample ID Description Type Environment
1 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
12 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
13 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
14 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
17 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
18 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
19 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
20 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
21 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
27 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
28 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
31 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
32 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
33 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
34 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
35 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
36 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
37 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
54 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
55 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
56 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
57 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
58 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
59 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
62 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
63 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
64 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
65 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
66 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
67 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
68 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
69 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
70 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
71 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
72 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
80 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
83 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
84 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
85 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
86 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
87 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
88 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
89 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
90 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
93 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
96 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
97 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
98 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
99 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
100 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
101 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
102 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
103 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
104 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
105 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
106 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
107 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
108 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
109 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
110 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
111 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
112 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
113 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
114 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
115 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
116 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
117 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
118 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
119 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
120 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
121 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
122 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
123 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
124 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
125 2643221596 Acidovorax sp. Root70 Isolate Unclassified
126 2932422444 Comamonas sp. 4034 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.78
Metatranscriptomes 0
Isolates 1.22

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.37
Nodule 0
Rhizoplane 1.22
Rhizosphere 77.44
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496114_0102059 3300048917 Bacteria 2450
2 Ga0065707_10403132 3300005295 Bacteria 850
3 Ga0070690_100001086 3300005330 Bacteria 13964
4 Ga0068869_100095086 3300005334 Bacteria 2248
5 Ga0070680_100313219 3300005336 Bacteria 1332
6 Ga0070682_100376108 3300005337 Bacteria 1067
7 Ga0070660_100013259 3300005339 Bacteria 5908
8 Ga0070689_100030359 3300005340 Bacteria 4102
9 Ga0070688_100079476 3300005365 Bacteria 2119
10 Ga0070708_100047113 3300005445 Bacteria 3807
11 Ga0070678_100007551 3300005456 Bacteria 6458
12 Ga0070685_10224218 3300005466 Bacteria 1233
13 Ga0070706_100163395 3300005467 Bacteria 2079
14 Ga0070698_100001718 3300005471 Bacteria 24414
15 Ga0070665_100001572 3300005548 Bacteria 26326
16 Ga0070664_100515985 3300005564 Bacteria 1103
17 Ga0068859_101074328 3300005617 Bacteria 885
18 Ga0068861_100204059 3300005719 Bacteria 1661
19 Ga0068863_100097700 3300005841 Bacteria 2789
20 Ga0068858_100955544 3300005842 Bacteria 839
21 Ga0068860_100533054 3300005843 Bacteria 1175
22 Ga0070717_10044568 3300006028 Bacteria 3623
23 Ga0070717_10047083 3300006028 Bacteria 3531
24 Ga0068871_100488752 3300006358 Bacteria 1108
25 Ga0075431_100300109 3300006847 Bacteria 1623
26 Ga0075429_100011552 3300006880 Bacteria 7658
27 Ga0075429_100015777 3300006880 Bacteria 6543
28 Ga0075429_100044469 3300006880 Bacteria 3863
29 Ga0075429_100240489 3300006880 Bacteria 1586
30 Ga0097620_101074031 3300006931 Bacteria 885
31 Ga0105245_10000219 3300009098 Bacteria 54553
32 Ga0105245_11313186 3300009098 Bacteria 772
33 Ga0114129_11492527 3300009147 Bacteria 831
34 Ga0105243_10094001 3300009148 Bacteria 2475
35 Ga0105238_10332405 3300009551 Bacteria 1507
36 Ga0105249_10007917 3300009553 Bacteria 9261
37 Ga0105249_10107953 3300009553 Bacteria 2627
38 Ga0157371_10426284 3300013102 Bacteria 973
39 Ga0157374_10183346 3300013296 Bacteria 2046
40 Ga0157378_10157753 3300013297 Bacteria 2119
41 Ga0157378_11300984 3300013297 Bacteria 768
42 Ga0157376_10005149 3300014969 Bacteria 9117
43 Ga0157376_10313086 3300014969 Bacteria 1490
44 Ga0157376_10331239 3300014969 Bacteria 1451
45 Ga0213876_10301462 3300021384 Bacteria 852
46 Ga0207705_10176176 3300025909 Bacteria 1612
47 Ga0207684_10483069 3300025910 Bacteria 1062
48 Ga0207662_10100322 3300025918 Bacteria 1793
49 Ga0207662_10522104 3300025918 Bacteria 820
50 Ga0207652_10377697 3300025921 Bacteria 1279
51 Ga0207652_10489376 3300025921 Bacteria 1108
52 Ga0207687_10000074 3300025927 Bacteria 73639
53 Ga0207709_10145772 3300025935 Bacteria 1633
54 Ga0207670_10006517 3300025936 Bacteria 6481
55 Ga0207670_10036295 3300025936 Bacteria 3204
56 Ga0207670_10123312 3300025936 Bacteria 1887
57 Ga0207704_10247573 3300025938 Bacteria 1336
58 Ga0207689_10081881 3300025942 Bacteria 2654
59 Ga0207689_10234383 3300025942 Bacteria 1517
60 Ga0207689_11086360 3300025942 Bacteria 674
61 Ga0207712_10027516 3300025961 Bacteria 3798
62 Ga0207712_10074652 3300025961 Bacteria 2449
63 Ga0207677_10236926 3300026023 Bacteria 1474
64 Ga0207703_10686961 3300026035 Bacteria 973
65 Ga0207641_10017641 3300026088 Bacteria 5846
66 Ga0207683_10003617 3300026121 Bacteria 13454
67 Ga0268266_10002674 3300028379 Bacteria 18751
68 Ga0268264_10447577 3300028381 Bacteria 1251
69 Ga0307517_10060772 3300028786 Bacteria 3588
70 Ga0307515_10000053 3300028794 Bacteria 266512
71 Ga0307515_10007755 3300028794 Bacteria 21128
72 Ga0265338_10128195 3300028800 Bacteria 2009
73 Ga0265338_10191572 3300028800 Bacteria 1549
74 Ga0265332_10001813 3300031238 Bacteria 11488
75 Ga0307513_10003659 3300031456 Bacteria 20801
76 Ga0307513_10147129 3300031456 Bacteria 2272
77 Ga0307513_10213379 3300031456 Bacteria 1759
78 Ga0307509_10000024 3300031507 Bacteria 237566
79 Ga0307509_10059028 3300031507 Bacteria 4060
80 Ga0307509_10066129 3300031507 Bacteria 3794
81 Ga0307509_10122660 3300031507 Bacteria 2573
82 Ga0307509_10490983 3300031507 Bacteria 914
83 Ga0307408_100454250 3300031548 Bacteria 1112
84 Ga0265314_10295882 3300031711 Bacteria 910
85 Ga0307516_10028363 3300031730 Bacteria 5665
86 Ga0307516_10102590 3300031730 Bacteria 2675
87 Ga0307405_10321981 3300031731 Bacteria 1181
88 Ga0307406_10002926 3300031901 Bacteria 9297
89 Ga0307416_101237060 3300032002 Bacteria 852
90 Ga0307507_10030485 3300033179 Bacteria 5689
91 Ga0373926_0167913 3300035083 Bacteria 839
92 Ga0373949_0000841 3300035090 Bacteria 9797
93 Ga0373936_0000010 3300035113 Bacteria 254300
94 Ga0373941_0058958 3300035115 Bacteria 1244
95 Ga0373941_0140330 3300035115 Bacteria 878
96 Ga0373954_0142584 3300035118 Bacteria 1169
97 Ga0373956_0141123 3300035119 Bacteria 1131
98 Ga0373961_0000145 3300035241 Bacteria 34776
99 Ga0395899_0030471 3300037312 Bacteria 4057
100 Ga0395900_0010640 3300037418 Bacteria 9408
101 Ga0395898_0101103 3300037466 Bacteria 2769
102 Ga0395905_0109783 3300037471 Bacteria 2590
103 Ga0395901_0061867 3300038443 Bacteria 3895
104 Ga0436365_0551534 3300039437 Bacteria 909
105 Ga0436363_0230645 3300039450 Bacteria 835
106 Ga0451576_0322499 3300045051 Bacteria 1617
107 Ga0466967_0213720 3300045976 Bacteria 1830
108 Ga0495629_0536078 3300046459 Bacteria 787
109 Ga0495638_0189832 3300046460 Bacteria 1166
110 Ga0495585_0000948 3300046492 Bacteria 24455
111 Ga0495596_0002400 3300046500 Bacteria 10126
112 Ga0495606_0005530 3300046507 Bacteria 12059
113 Ga0495622_0040336 3300046557 Bacteria 2173
114 Ga0495683_0000533 3300047323 Bacteria 28850
115 Ga0496104_1056835 3300048907 Bacteria 716
116 Ga0495682_0058270 3300049460 Bacteria 1397
117 Ga0501034_0304653 3300049571 Bacteria 1529
118 Ga0501034_0619888 3300049571 Bacteria 986
119 Ga0501043_0694977 3300049579 Bacteria 743
120 Ga0501046_0312921 3300049580 Bacteria 1145
121 Ga0501046_0714893 3300049580 Bacteria 705
122 Ga0501047_0013290 3300049581 Bacteria 7797
123 Ga0501047_0415720 3300049581 Bacteria 1176
124 Ga0501067_0556983 3300049583 Bacteria 642
125 Ga0501069_0044775 3300049585 Bacteria 2450
126 Ga0501070_0190028 3300049586 Bacteria 1688
127 Ga0501070_0213471 3300049586 Bacteria 1583
128 Ga0501070_0222011 3300049586 Bacteria 1549
129 Ga0501070_0329516 3300049586 Bacteria 1241
130 Ga0501072_0497151 3300049588 Bacteria 965
131 Ga0501073_0310572 3300049589 Bacteria 1088
132 Ga0501073_0429841 3300049589 Bacteria 913
133 Ga0501074_0077678 3300049590 Bacteria 2383
134 Ga0501207_011739 3300049654 Bacteria 1308
135 Ga0501217_030599 3300049661 Bacteria 1322
136 Ga0501230_002238 3300049667 Bacteria 2446
137 Ga0501225_0031714 3300049705 Bacteria 1454
138 Ga0501081_0069763 3300049743 Bacteria 2449
139 Ga0501083_0026603 3300049744 Bacteria 3997
140 Ga0501044_0007825 3300049823 Bacteria 11746
141 Ga0501044_0294284 3300049823 Bacteria 1554
142 nmdc:mga09592_10544_c1 3300050508 Bacteria 6281
143 nmdc:mga09592_4496_c1 3300050508 Bacteria 11282
144 nmdc:mga06r32_162668_c1 3300050510 Bacteria 1638
145 Ga0500646_0005557 3300053090 Bacteria 3190
146 Ga0500583_0171862 3300053092 Bacteria 1079
147 Ga0500566_0001959 3300053094 Bacteria 12129
148 Ga0500566_0015918 3300053094 Bacteria 4416
149 Ga0500640_002393 3300053095 Bacteria 6192
150 Ga0500554_000106 3300053102 Bacteria 16101
151 Ga0500554_065218 3300053102 Bacteria 1176
152 Ga0500572_001048 3300053111 Bacteria 8235
153 Ga0500595_000138 3300053119 Bacteria 47841
154 Ga0500614_000401 3300053123 Bacteria 11285
155 Ga0500642_0045077 3300053130 Bacteria 1923
156 Ga0500658_0064596 3300053134 Bacteria 1531
157 Ga0500559_0008857 3300053136 Bacteria 4383
158 Ga0500568_0012370 3300053139 Bacteria 3929
159 Ga0500568_0025381 3300053139 Bacteria 2501
160 Ga0500585_152214 3300053144 Bacteria 806
161 Ga0500603_077591 3300053150 Bacteria 957
162 Ga0501082_0064907 3300060353 Bacteria 3144
163 2643991425 2643221596 Bacteria 5006805
164 2932425224 2932422444 Bacteria 4678430
165 Ga0496114_0102059
166 Ga0065707_10403132
167 Ga0070690_100001086
168 Ga0068869_100095086
169 Ga0070680_100313219
170 Ga0070682_100376108
171 Ga0070660_100013259
172 Ga0070689_100030359
173 Ga0070688_100079476
174 Ga0070708_100047113
175 Ga0070678_100007551
176 Ga0070685_10224218
177 Ga0070706_100163395
178 Ga0070698_100001718
179 Ga0070665_100001572
180 Ga0070664_100515985
181 Ga0068859_101074328
182 Ga0068861_100204059
183 Ga0068863_100097700
184 Ga0068858_100955544
185 Ga0068860_100533054
186 Ga0070717_10044568
187 Ga0070717_10047083
188 Ga0068871_100488752
189 Ga0075431_100300109
190 Ga0075429_100011552
191 Ga0075429_100015777
192 Ga0075429_100044469
193 Ga0075429_100240489
194 Ga0097620_101074031
195 Ga0105245_10000219
196 Ga0105245_11313186
197 Ga0114129_11492527
198 Ga0105243_10094001
199 Ga0105238_10332405
200 Ga0105249_10007917
201 Ga0105249_10107953
202 Ga0157371_10426284
203 Ga0157374_10183346
204 Ga0157378_10157753
205 Ga0157378_11300984
206 Ga0157376_10005149
207 Ga0157376_10313086
208 Ga0157376_10331239
209 Ga0213876_10301462
210 Ga0207705_10176176
211 Ga0207684_10483069
212 Ga0207662_10100322
213 Ga0207662_10522104
214 Ga0207652_10377697
215 Ga0207652_10489376
216 Ga0207687_10000074
217 Ga0207709_10145772
218 Ga0207670_10006517
219 Ga0207670_10036295
220 Ga0207670_10123312
221 Ga0207704_10247573
222 Ga0207689_10081881
223 Ga0207689_10234383
224 Ga0207689_11086360
225 Ga0207712_10027516
226 Ga0207712_10074652
227 Ga0207677_10236926
228 Ga0207703_10686961
229 Ga0207641_10017641
230 Ga0207683_10003617
231 Ga0268266_10002674
232 Ga0268264_10447577
233 Ga0307517_10060772
234 Ga0307515_10000053
235 Ga0307515_10007755
236 Ga0265338_10128195
237 Ga0265338_10191572
238 Ga0265332_10001813
239 Ga0307513_10003659
240 Ga0307513_10147129
241 Ga0307513_10213379
242 Ga0307509_10000024
243 Ga0307509_10059028
244 Ga0307509_10066129
245 Ga0307509_10122660
246 Ga0307509_10490983
247 Ga0307408_100454250
248 Ga0265314_10295882
249 Ga0307516_10028363
250 Ga0307516_10102590
251 Ga0307405_10321981
252 Ga0307406_10002926
253 Ga0307416_101237060
254 Ga0307507_10030485
255 Ga0373926_0167913
256 Ga0373949_0000841
257 Ga0373936_0000010
258 Ga0373941_0058958
259 Ga0373941_0140330
260 Ga0373954_0142584
261 Ga0373956_0141123
262 Ga0373961_0000145
263 Ga0395899_0030471
264 Ga0395900_0010640
265 Ga0395898_0101103
266 Ga0395905_0109783
267 Ga0395901_0061867
268 Ga0436365_0551534
269 Ga0436363_0230645
270 Ga0451576_0322499
271 Ga0466967_0213720
272 Ga0495629_0536078
273 Ga0495638_0189832
274 Ga0495585_0000948
275 Ga0495596_0002400
276 Ga0495606_0005530
277 Ga0495622_0040336
278 Ga0495683_0000533
279 Ga0496104_1056835
280 Ga0495682_0058270
281 Ga0501034_0304653
282 Ga0501034_0619888
283 Ga0501043_0694977
284 Ga0501046_0312921
285 Ga0501046_0714893
286 Ga0501047_0013290
287 Ga0501047_0415720
288 Ga0501067_0556983
289 Ga0501069_0044775
290 Ga0501070_0190028
291 Ga0501070_0213471
292 Ga0501070_0222011
293 Ga0501070_0329516
294 Ga0501072_0497151
295 Ga0501073_0310572
296 Ga0501073_0429841
297 Ga0501074_0077678
298 Ga0501207_011739
299 Ga0501217_030599
300 Ga0501230_002238
301 Ga0501225_0031714
302 Ga0501081_0069763
303 Ga0501083_0026603
304 Ga0501044_0007825
305 Ga0501044_0294284
306 nmdc:mga09592_10544_c1
307 nmdc:mga09592_4496_c1
308 nmdc:mga06r32_162668_c1
309 Ga0500646_0005557
310 Ga0500583_0171862
311 Ga0500566_0001959
312 Ga0500566_0015918
313 Ga0500640_002393
314 Ga0500554_000106
315 Ga0500554_065218
316 Ga0500572_001048
317 Ga0500595_000138
318 Ga0500614_000401
319 Ga0500642_0045077
320 Ga0500658_0064596
321 Ga0500559_0008857
322 Ga0500568_0012370
323 Ga0500568_0025381
324 Ga0500585_152214
325 Ga0500603_077591
326 Ga0501082_0064907
327 2643991425
328 2932425224

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01144

CoA_trans

Coenzyme A transferase

8

199

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
3k6m-assembly2.cif.gz_C dynamic domains of succinyl-coa:3-ketoacid-coenzyme a transferase from pig heart. 0.8146 5 211
3oxo-assembly3.cif.gz_E succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa 0.8135 8 211
3oxo-assembly3.cif.gz_F succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa 0.8129 8 211
3oxo-assembly4.cif.gz_H succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa 0.8103 11 211
3oxo-assembly4.cif.gz_G succinyl-coa:3-ketoacid coa transferase from pig heart covalently bound to coa 0.8081 8 211
ID Description Score Start End Superfamily
5dbnD00 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.7992 3 212 3.40.1080.10
af_P32144_74_134_3.30.750.70 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA;4-hydroxybutyrate coenzyme 0.7976 5 46 3.30.750.70
2nrcB02 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.7602 5 212 3.40.1080.10
2nrcB02 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.7436 5 212 3.40.1080.10
af_Q2G1C6_278_523_3.40.1080.10 Alpha Beta;3-Layer(aba) Sandwich;Glutaconate Coenzyme A-transferase;Glutaconate Coenzyme A-transferase 0.7284 4 212 3.40.1080.10
ID Description Score Start End GO Terms
AF-B9TL95-F1-model_v4 Ketoacid-coenzyme A transferase, putative 0.9985 143 211 GO:0008410
AF-A0A1V6EVW9-F1-model_v4 Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B (EC 2.8.3.5) 0.9517 91 212 GO:0008260
AF-A0A1V6EVW9-F1-model_v4 Putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit B (EC 2.8.3.5) 0.9443 91 212 GO:0008260
AF-A0A6J6BBU6-F1-model_v4 Unannotated protein 0.9391 91 212 GO:0008410
AF-A0A349AWC3-F1-model_v4 Succinyl-CoA--3-ketoacid-CoA transferase 0.9388 109 212 GO:0008410

Map