F244481

General Info

Members Datasets Scaffolds Average Seq Length
164 140 328 205

Family's Representative Sequence

Representative Sequence 3300044683|Ga0466965_0080653|Ga0466965_0080653_149_811
Length 220
Sequence MDPHQADPRADLASLRAEYQLAGLDEADLAADPFTMFGQWFDTAREAGVLEPNAMVLSTVSADGVPSARTVLLKGVTEHGFVFFTNYESRKAGELGSNPHCSLLFGWYQLQRQVRIEGVASRIPRADTEAYFATRPRDSQLGAWASPQSSVVGSRAELDAAYADLEARFAGADVPAPPHWGGYLVTPQRVEFWQGRRSRMHDRLSYRREGAHWVVERLAP

Samples

Sample ID Description Type Environment
1 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
20 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
24 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
29 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
30 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
31 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
32 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
33 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
34 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
42 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
43 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
44 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
45 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
46 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
47 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
48 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
49 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
65 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
69 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
70 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
71 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
72 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
73 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
78 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
79 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
80 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
81 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
82 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
83 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
84 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
85 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
86 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
87 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
88 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
89 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
90 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
93 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
94 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
95 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
96 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
97 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
98 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
99 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
100 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
101 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
102 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
103 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
104 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
105 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
106 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
107 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
109 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
110 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
111 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
114 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
115 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
116 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
117 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
118 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
119 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
120 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
121 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
122 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
123 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
124 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
125 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
126 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
127 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
128 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
129 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
130 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
131 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
132 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
133 2921257292 Sinorhizobium meliloti USDA1320 Isolate Nodule
134 2937023124 Sinorhizobium meliloti USDA1335 Isolate Nodule
135 2957382221 Sinorhizobium meliloti USDA1919 Isolate Nodule
136 2957395598 Sinorhizobium meliloti USDA1237 Isolate Nodule
137 2957402308 Sinorhizobium meliloti USDA1794 Isolate Nodule
138 2964615318 Sinorhizobium meliloti USDA1248 Isolate Nodule
139 2967755722 Sinorhizobium meliloti USDA1302 Isolate Nodule
140 2970102677 Sinorhizobium meliloti USDA1325 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.9
Metatranscriptomes 0
Isolates 6.1

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.71
Nodule 6.1
Rhizoplane 4.88
Rhizosphere 76.83
Stem 0
Stem Tuber 0
Unclassified 3.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466965_0080653 3300044683 Bacteria 1645
2 JGI25406J46586_10031415 3300003203 Bacteria 1986
3 rootH2_10056148 3300003320 Bacteria 1818
4 Ga0065707_10117251 3300005295 Bacteria 2216
5 Ga0070676_10312254 3300005328 Bacteria 1069
6 Ga0068869_100726324 3300005334 Bacteria 849
7 Ga0070660_100447853 3300005339 Bacteria 1071
8 Ga0070668_100000183 3300005347 Bacteria 40650
9 Ga0070675_100699052 3300005354 Bacteria 923
10 Ga0070673_100482406 3300005364 Bacteria 1119
11 Ga0070714_100506969 3300005435 Bacteria 1151
12 Ga0070714_100975810 3300005435 Bacteria 824
13 Ga0070713_100043762 3300005436 Bacteria 3663
14 Ga0070713_100395943 3300005436 Bacteria 1289
15 Ga0070678_100685243 3300005456 Bacteria 922
16 Ga0068867_100215065 3300005459 Bacteria 1546
17 Ga0070698_100730100 3300005471 Unclassified 933
18 Ga0070684_100049362 3300005535 Bacteria 3652
19 Ga0068853_100983906 3300005539 Unclassified 812
20 Ga0068857_100458704 3300005577 Bacteria 1192
21 Ga0070702_100229199 3300005615 Bacteria 1247
22 Ga0068852_100255696 3300005616 Bacteria 1680
23 Ga0068859_100947506 3300005617 Bacteria 944
24 Ga0068866_10213322 3300005718 Bacteria 1160
25 Ga0068862_100113471 3300005844 Bacteria 2381
26 Ga0081539_10001811 3300005985 Bacteria 33775
27 Ga0070717_10010775 3300006028 Bacteria 6920
28 Ga0070717_10460274 3300006028 Bacteria 1147
29 Ga0075365_10060972 3300006038 Bacteria 2518
30 Ga0075364_10002888 3300006051 Bacteria 9688
31 Ga0075364_10086596 3300006051 Bacteria 2076
32 Ga0075367_10029824 3300006178 Bacteria 3123
33 Ga0097621_100065029 3300006237 Bacteria 3001
34 Ga0068871_100113845 3300006358 Bacteria 2278
35 Ga0075428_100021756 3300006844 Bacteria 7100
36 Ga0075428_100288357 3300006844 Bacteria 1766
37 Ga0075428_100651066 3300006844 Bacteria 1123
38 Ga0075430_100012981 3300006846 Bacteria 7100
39 Ga0075430_100090976 3300006846 Bacteria 2552
40 Ga0075431_100018477 3300006847 Bacteria 7100
41 Ga0075434_100089411 3300006871 Bacteria 3081
42 Ga0075429_100013442 3300006880 Bacteria 7100
43 Ga0068865_100045275 3300006881 Bacteria 3016
44 Ga0097620_100947537 3300006931 Bacteria 944
45 Ga0079104_1000183 3300006946 Bacteria 89496
46 Ga0105247_10021058 3300009101 Bacteria 3923
47 Ga0114129_10000039 3300009147 Bacteria 108531
48 Ga0105243_10028339 3300009148 Bacteria 4299
49 Ga0105248_10021450 3300009177 Bacteria 7155
50 Ga0105249_11441795 3300009553 Bacteria 761
51 Ga0157374_10621555 3300013296 Bacteria 1091
52 Ga0163162_10070175 3300013306 Bacteria 3555
53 Ga0163163_10334498 3300014325 Bacteria 1569
54 Ga0157379_10232870 3300014968 Bacteria 1670
55 Ga0209129_1007439 3300025258 Bacteria 3263
56 Ga0207688_10059248 3300025901 Bacteria 2156
57 Ga0207645_10154064 3300025907 Bacteria 1501
58 Ga0207684_10007460 3300025910 Bacteria 9842
59 Ga0207700_10356259 3300025928 Bacteria 1275
60 Ga0207664_10681842 3300025929 Bacteria 924
61 Ga0207706_10167484 3300025933 Bacteria 1931
62 Ga0207709_10092568 3300025935 Bacteria 1980
63 Ga0207689_10625591 3300025942 Bacteria 906
64 Ga0207679_10025213 3300025945 Bacteria 4087
65 Ga0207651_10339568 3300025960 Bacteria 1261
66 Ga0207668_10000831 3300025972 Bacteria 18686
67 Ga0207658_10111330 3300025986 Bacteria 2165
68 Ga0207639_10292389 3300026041 Unclassified 1437
69 Ga0207648_10223287 3300026089 Bacteria 1675
70 Ga0207698_10158591 3300026142 Bacteria 1975
71 Ga0209281_1000295 3300027111 Bacteria 90994
72 Ga0268266_10960298 3300028379 Bacteria 827
73 Ga0268265_10080921 3300028380 Bacteria 2563
74 Ga0307513_10101536 3300031456 Bacteria 2898
75 Ga0307508_10000914 3300031616 Bacteria 34391
76 Ga0316575_10030973 3300031665 Bacteria 2093
77 Ga0316575_10089867 3300031665 Bacteria 1243
78 Ga0316576_10018489 3300031727 Bacteria 4759
79 Ga0316576_10030060 3300031727 Unclassified 3844
80 Ga0316578_10000801 3300031728 Bacteria 11652
81 Ga0307405_10099373 3300031731 Bacteria 1947
82 Ga0307405_10645458 3300031731 Bacteria 870
83 Ga0316577_10011361 3300031733 Bacteria 4823
84 Ga0316577_10173610 3300031733 Bacteria 1216
85 Ga0307410_10047951 3300031852 Bacteria 2858
86 Ga0326468_10000067 3300031889 Bacteria 8492
87 Ga0307406_10035233 3300031901 Bacteria 3076
88 Ga0307407_10032900 3300031903 Bacteria 2824
89 Ga0307407_10116233 3300031903 Bacteria 1688
90 Ga0307409_100104284 3300031995 Bacteria 2361
91 Ga0307409_100352356 3300031995 Bacteria 1389
92 Ga0307416_100031513 3300032002 Bacteria 3992
93 Ga0307411_10255234 3300032005 Bacteria 1381
94 Ga0307415_100101161 3300032126 Bacteria 2114
95 Ga0307415_100193183 3300032126 Bacteria 1608
96 Ga0316583_10075168 3300032133 Bacteria 1181
97 Ga0316585_10003543 3300032137 Bacteria 4294
98 Ga0316585_10050505 3300032137 Unclassified 1335
99 Ga0316580_10012501 3300032139 Bacteria 2588
100 Ga0373940_0021768 3300035088 Bacteria 1642
101 Ga0373942_0000142 3300035207 Bacteria 17062
102 Ga0316574_0000275 3300035398 Bacteria 19134
103 Ga0316574_0011515 3300035398 Bacteria 5028
104 Ga0316574_0027592 3300035398 Bacteria 3421
105 Ga0316582_0067862 3300036647 Bacteria 2301
106 Ga0316584_0016008 3300036712 Bacteria 5372
107 Ga0316584_0263759 3300036712 Bacteria 1255
108 Ga0316581_0103893 3300037588 Bacteria 875
109 Ga0395901_0153661 3300038443 Bacteria 2417
110 Ga0466969_0016892 3300044656 Bacteria 3816
111 Ga0466966_0287228 3300044684 Bacteria 989
112 Ga0495662_0448690 3300046476 Bacteria 633
113 Ga0495594_0028948 3300046499 Bacteria 2991
114 Ga0495684_0240692 3300047471 Bacteria 1320
115 Ga0496100_0207420 3300048903 Bacteria 1432
116 Ga0496102_0000029 3300048905 Bacteria 222195
117 Ga0496102_0461803 3300048905 Bacteria 1191
118 Ga0496103_0000143 3300048906 Bacteria 74753
119 Ga0496108_0230185 3300048911 Bacteria 1612
120 Ga0496110_0140019 3300048913 Bacteria 2187
121 Ga0496110_1134131 3300048913 Bacteria 690
122 Ga0496114_0159792 3300048917 Bacteria 1959
123 Ga0496117_0074139 3300048920 Bacteria 2267
124 Ga0496118_0008574 3300048921 Bacteria 10525
125 Ga0496119_0021472 3300048922 Bacteria 4667
126 Ga0496122_0023744 3300048925 Bacteria 5390
127 Ga0501032_0000060 3300049569 Bacteria 95279
128 Ga0501034_0097365 3300049571 Bacteria 2938
129 Ga0501034_0605809 3300049571 Bacteria 1000
130 Ga0501036_0783429 3300049572 Bacteria 786
131 Ga0501048_0320142 3300049582 Bacteria 1105
132 Ga0501068_0629736 3300049584 Bacteria 700
133 Ga0501070_0120958 3300049586 Bacteria 2164
134 Ga0501070_0558895 3300049586 Bacteria 915
135 Ga0501076_0653794 3300049592 Bacteria 867
136 Ga0501280_003574 3300049776 Bacteria 2371
137 Ga0501282_006537 3300049778 Bacteria 1245
138 nmdc:mga03n38_140105_c1 3300050490 Bacteria 1207
139 nmdc:mga00v17_147474_c1 3300050491 Bacteria 1510
140 nmdc:mga00v17_159661_c1 3300050491 Bacteria 1450
141 nmdc:mga05p37_153_c1 3300050507 Bacteria 65478
142 nmdc:mga09592_4_c1 3300050508 Bacteria 133185
143 nmdc:mga09592_730139_c1 3300050508 Bacteria 841
144 nmdc:mga0qj67_3_c2 3300050509 Bacteria 152036
145 nmdc:mga06r32_6_c2 3300050510 Bacteria 109995
146 nmdc:mga0n895_54173_c1 3300050512 Bacteria 3944
147 Ga0495601_0041206 3300053077 Bacteria 2894
148 Ga0495612_0050627 3300053078 Bacteria 1706
149 Ga0500635_0037818 3300053080 Bacteria 1597
150 Ga0495619_0184241 3300053085 Bacteria 1444
151 Ga0500618_001475 3300053125 Bacteria 10421
152 Ga0500616_0182759 3300053153 Bacteria 943
153 Ga0501082_0132898 3300060353 Bacteria 2159
154 Ga0530510_0578839 3300061734 Bacteria 853
155 2867313511 2867312974 Bacteria 7058875
156 2867322667 2867319477 Bacteria 7069771
157 2921263262 2921257292 Bacteria 6808382
158 2937024464 2937023124 Bacteria 6815156
159 2957385850 2957382221 Bacteria 6737050
160 2957400647 2957395598 Bacteria 6822399
161 2957406119 2957402308 Bacteria 6741770
162 2964620928 2964615318 Bacteria 6809089
163 2967756096 2967755722 Bacteria 6814706
164 2970103867 2970102677 Bacteria 6812532
165 Ga0466965_0080653
166 JGI25406J46586_10031415
167 rootH2_10056148
168 Ga0065707_10117251
169 Ga0070676_10312254
170 Ga0068869_100726324
171 Ga0070660_100447853
172 Ga0070668_100000183
173 Ga0070675_100699052
174 Ga0070673_100482406
175 Ga0070714_100506969
176 Ga0070714_100975810
177 Ga0070713_100043762
178 Ga0070713_100395943
179 Ga0070678_100685243
180 Ga0068867_100215065
181 Ga0070698_100730100
182 Ga0070684_100049362
183 Ga0068853_100983906
184 Ga0068857_100458704
185 Ga0070702_100229199
186 Ga0068852_100255696
187 Ga0068859_100947506
188 Ga0068866_10213322
189 Ga0068862_100113471
190 Ga0081539_10001811
191 Ga0070717_10010775
192 Ga0070717_10460274
193 Ga0075365_10060972
194 Ga0075364_10002888
195 Ga0075364_10086596
196 Ga0075367_10029824
197 Ga0097621_100065029
198 Ga0068871_100113845
199 Ga0075428_100021756
200 Ga0075428_100288357
201 Ga0075428_100651066
202 Ga0075430_100012981
203 Ga0075430_100090976
204 Ga0075431_100018477
205 Ga0075434_100089411
206 Ga0075429_100013442
207 Ga0068865_100045275
208 Ga0097620_100947537
209 Ga0079104_1000183
210 Ga0105247_10021058
211 Ga0114129_10000039
212 Ga0105243_10028339
213 Ga0105248_10021450
214 Ga0105249_11441795
215 Ga0157374_10621555
216 Ga0163162_10070175
217 Ga0163163_10334498
218 Ga0157379_10232870
219 Ga0209129_1007439
220 Ga0207688_10059248
221 Ga0207645_10154064
222 Ga0207684_10007460
223 Ga0207700_10356259
224 Ga0207664_10681842
225 Ga0207706_10167484
226 Ga0207709_10092568
227 Ga0207689_10625591
228 Ga0207679_10025213
229 Ga0207651_10339568
230 Ga0207668_10000831
231 Ga0207658_10111330
232 Ga0207639_10292389
233 Ga0207648_10223287
234 Ga0207698_10158591
235 Ga0209281_1000295
236 Ga0268266_10960298
237 Ga0268265_10080921
238 Ga0307513_10101536
239 Ga0307508_10000914
240 Ga0316575_10030973
241 Ga0316575_10089867
242 Ga0316576_10018489
243 Ga0316576_10030060
244 Ga0316578_10000801
245 Ga0307405_10099373
246 Ga0307405_10645458
247 Ga0316577_10011361
248 Ga0316577_10173610
249 Ga0307410_10047951
250 Ga0326468_10000067
251 Ga0307406_10035233
252 Ga0307407_10032900
253 Ga0307407_10116233
254 Ga0307409_100104284
255 Ga0307409_100352356
256 Ga0307416_100031513
257 Ga0307411_10255234
258 Ga0307415_100101161
259 Ga0307415_100193183
260 Ga0316583_10075168
261 Ga0316585_10003543
262 Ga0316585_10050505
263 Ga0316580_10012501
264 Ga0373940_0021768
265 Ga0373942_0000142
266 Ga0316574_0000275
267 Ga0316574_0011515
268 Ga0316574_0027592
269 Ga0316582_0067862
270 Ga0316584_0016008
271 Ga0316584_0263759
272 Ga0316581_0103893
273 Ga0395901_0153661
274 Ga0466969_0016892
275 Ga0466966_0287228
276 Ga0495662_0448690
277 Ga0495594_0028948
278 Ga0495684_0240692
279 Ga0496100_0207420
280 Ga0496102_0000029
281 Ga0496102_0461803
282 Ga0496103_0000143
283 Ga0496108_0230185
284 Ga0496110_0140019
285 Ga0496110_1134131
286 Ga0496114_0159792
287 Ga0496117_0074139
288 Ga0496118_0008574
289 Ga0496119_0021472
290 Ga0496122_0023744
291 Ga0501032_0000060
292 Ga0501034_0097365
293 Ga0501034_0605809
294 Ga0501036_0783429
295 Ga0501048_0320142
296 Ga0501068_0629736
297 Ga0501070_0120958
298 Ga0501070_0558895
299 Ga0501076_0653794
300 Ga0501280_003574
301 Ga0501282_006537
302 nmdc:mga03n38_140105_c1
303 nmdc:mga00v17_147474_c1
304 nmdc:mga00v17_159661_c1
305 nmdc:mga05p37_153_c1
306 nmdc:mga09592_4_c1
307 nmdc:mga09592_730139_c1
308 nmdc:mga0qj67_3_c2
309 nmdc:mga06r32_6_c2
310 nmdc:mga0n895_54173_c1
311 Ga0495601_0041206
312 Ga0495612_0050627
313 Ga0500635_0037818
314 Ga0495619_0184241
315 Ga0500618_001475
316 Ga0500616_0182759
317 Ga0501082_0132898
318 Ga0530510_0578839
319 2867313511
320 2867322667
321 2921263262
322 2937024464
323 2957385850
324 2957400647
325 2957406119
326 2964620928
327 2967756096
328 2970103867

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF10590

PNP_phzG_C

Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region

180

220

0.98

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

41

127

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
1jnw-assembly1.cif.gz_A-2 active site structure of e. coli pyridoxine 5'-phosphate oxidase 0.9641 4 218
6ylz-assembly1.cif.gz_AAA-2 x-ray structure of the k72i,y129f,r133l, h199a quadruple mutant of pnp-oxidase from e. coli 0.9635 19 218
1ci0-assembly1.cif.gz_B pnp oxidase from saccharomyces cerevisiae 0.9635 20 218
1dnl-assembly1.cif.gz_A x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase complexed with fmn at 1.8 angstrom resolution 0.9625 19 218
1dnl-assembly1.cif.gz_A x-ray structure of escherichia coli pyridoxine 5'-phosphate oxidase complexed with fmn at 1.8 angstrom resolution 0.9578 19 218
ID Description Score Start End Superfamily
1g78A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9708 19 218 2.30.110.10
af_A0A1R3LXN8_584_738_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9697 15 169 2.30.110.10
af_Q54YS6_26_227_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9663 19 218 2.30.110.10
1g78A00 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9659 19 218 2.30.110.10
af_Q9UTQ1_28_231_2.30.110.10 Mainly Beta;Roll;Pnp Oxidase; Chain A;Electron Transport, Fmn-binding Protein; Chain A 0.9651 22 218 2.30.110.10
ID Description Score Start End GO Terms
AF-A0A527H0Q6-F1-model_v4 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) 0.991 53 218 GO:0004733
GO:0008615
GO:0010181
AF-A0A519I4P0-F1-model_v4 deleted 0.9888 46 218
AF-A0A7C2D245-F1-model_v4 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) 0.9868 11 218 GO:0004733
GO:0008615
GO:0010181
AF-A0A2S6QUP5-F1-model_v4 Pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) 0.9868 53 218 GO:0004733
GO:0008615
GO:0010181
AF-A1TWZ3-F1-model_v4 Pyridoxine/pyridoxamine 5'-phosphate oxidase (EC 1.4.3.5) (PNP/PMP oxidase) (PNPOx) (Pyridoxal 5'-phosphate synthase) 0.9867 11 218 GO:0004733
GO:0008615
GO:0010181

Map