F238781

General Info

Members Datasets Scaffolds Average Seq Length
162 102 324 356

Family's Representative Sequence

Representative Sequence 3300005536|Ga0070697_100066599|Ga0070697_1000665992
Length 403
Sequence MDRPARPGSQPTSAPSETRQSLDNLKLERDAIALYDALASIEKDRRRAAAFRTIAGNERRHADIWASKLRGQGVDVPPPAGPRPRVRLIITLARLFGTNAVSDLVRALEGDEEEAYDAQSSPEVQSIAADEREHAAIWRRLELQRSGDATAEVLAGREEATADGLRAVGEILREEKWHRAGQSGTLRAVIFGVSDGLVSNLSLVMGIAGASQQNSFILLAGIAGLLAGAFSMAAGEYVSMKAQRELYERQIALERAELEAMPQEEQAELAAVYRSKGFAPEEAARIAERIFRNPEAALETLIREELGLDPEQLGSPWGAASGSFSAFALGAALPVVPYVVTSGSAAFTASIVLSAVALFTVGGGVSLLTGRGLVFSGARQVAIGAAAAAVTFLVGHLIGAAVS

Samples

Sample ID Description Type Environment
1 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
4 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
5 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
6 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
7 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
8 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
9 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
10 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
11 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
12 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
13 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
14 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
17 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
21 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
22 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
23 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
24 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
25 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
26 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
27 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
30 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
31 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
32 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
43 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
46 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
49 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
50 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
51 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
52 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
53 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
54 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
55 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
56 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
57 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
58 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
59 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
60 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
61 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
62 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
63 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
64 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
65 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
66 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
67 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
68 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
69 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
70 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
71 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
72 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
73 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
74 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
75 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
76 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
77 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
78 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
79 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
80 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
81 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
82 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
83 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
84 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
85 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
86 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
87 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
88 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
89 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
90 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
91 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
92 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
93 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
94 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
95 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
96 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
97 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
98 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
99 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
100 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
101 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
102 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 6.79
Rhizosphere 92.59
Stem 0
Stem Tuber 0
Unclassified 9.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070697_100066599 3300005536 Bacteria 2945
2 JGI25406J46586_10008334 3300003203 Bacteria 4701
3 Ga0070676_10084546 3300005328 Bacteria 1932
4 Ga0070680_100096092 3300005336 Bacteria 2457
5 Ga0070674_100014884 3300005356 Bacteria 4843
6 Ga0070705_100024254 3300005440 Bacteria 3271
7 Ga0070708_100027341 3300005445 Bacteria 4894
8 Ga0070708_100057513 3300005445 Bacteria 3463
9 Ga0070708_100091695 3300005445 Unclassified 2767
10 Ga0070678_100050846 3300005456 Bacteria 3000
11 Ga0070706_100051133 3300005467 Unclassified 3813
12 Ga0070707_100003529 3300005468 Bacteria 14761
13 Ga0070707_100071765 3300005468 Bacteria 3335
14 Ga0070707_100201340 3300005468 Unclassified 1941
15 Ga0070698_100016554 3300005471 Bacteria 7780
16 Ga0070698_100045901 3300005471 Bacteria 4470
17 Ga0070699_100003054 3300005518 Bacteria 14853
18 Ga0070679_100045878 3300005530 Bacteria 4354
19 Ga0070684_100024567 3300005535 Bacteria 5056
20 Ga0070684_100143360 3300005535 Bacteria 2161
21 Ga0070697_100003427 3300005536 Bacteria 12199
22 Ga0070697_100255050 3300005536 Bacteria 1500
23 Ga0070686_100129391 3300005544 Unclassified 1744
24 Ga0070695_100021887 3300005545 Archaea 3917
25 Ga0070695_100030165 3300005545 Bacteria 3374
26 Ga0070696_100000731 3300005546 Bacteria 20972
27 Ga0070696_100011220 3300005546 Bacteria 5998
28 Ga0070696_100041791 3300005546 Archaea 3168
29 Ga0070704_100278888 3300005549 Archaea 1384
30 Ga0068856_100233380 3300005614 Unclassified 1855
31 Ga0068861_100086803 3300005719 Bacteria 2461
32 Ga0068863_100376566 3300005841 Unclassified 1386
33 Ga0081539_10001884 3300005985 Bacteria 32727
34 Ga0075431_100403358 3300006847 Bacteria 1368
35 Ga0075433_10266120 3300006852 Archaea 1519
36 Ga0105245_10020154 3300009098 Bacteria 5844
37 Ga0105242_10056608 3300009176 Bacteria 3209
38 Ga0105242_10144363 3300009176 Bacteria 2069
39 Ga0105248_10372732 3300009177 Unclassified 1607
40 Ga0105246_10006871 3300011119 Bacteria 6963
41 Ga0163163_10171719 3300014325 Bacteria 2215
42 Ga0182008_10099525 3300014497 Bacteria 1436
43 Ga0163161_10165006 3300017792 Bacteria 1691
44 Ga0207653_10006825 3300025885 Bacteria 3566
45 Ga0207645_10037864 3300025907 Bacteria 3095
46 Ga0207684_10022309 3300025910 Bacteria 5404
47 Ga0207684_10035161 3300025910 Bacteria 4255
48 Ga0207684_10259408 3300025910 Unclassified 1499
49 Ga0207660_10131239 3300025917 Bacteria 1907
50 Ga0207652_10201991 3300025921 Unclassified 1789
51 Ga0207646_10021122 3300025922 Bacteria 6021
52 Ga0207646_10028972 3300025922 Bacteria 5036
53 Ga0207659_10033592 3300025926 Bacteria 3533
54 Ga0207711_10296180 3300025941 Unclassified 1492
55 Ga0207678_10188253 3300026067 Bacteria 1763
56 Ga0207702_10152447 3300026078 Unclassified 2104
57 Ga0207675_100031635 3300026118 Bacteria 4930
58 Ga0207683_10005717 3300026121 Bacteria 10668
59 Ga0207698_10306963 3300026142 Bacteria 1480
60 Ga0209998_10003238 3300027717 Bacteria 3593
61 Ga0209974_10026134 3300027876 Bacteria 1933
62 Ga0268264_10005027 3300028381 Bacteria 11193
63 Ga0265319_1000328 3300028563 Bacteria 34982
64 Ga0265318_10013934 3300028577 Bacteria 3384
65 Ga0265318_10015074 3300028577 Bacteria 3227
66 Ga0265318_10021274 3300028577 Bacteria 2605
67 Ga0265318_10023921 3300028577 Unclassified 2430
68 Ga0265336_10008804 3300028666 Bacteria 3519
69 Ga0265324_10004283 3300029957 Bacteria 6512
70 Ga0265332_10002954 3300031238 Bacteria 8356
71 Ga0265320_10019092 3300031240 Bacteria 3757
72 Ga0265325_10007198 3300031241 Bacteria 6691
73 Ga0265340_10000263 3300031247 Bacteria 27233
74 Ga0265339_10036481 3300031249 Bacteria 2752
75 Ga0265339_10059485 3300031249 Bacteria 2060
76 Ga0265331_10014981 3300031250 Bacteria 4110
77 Ga0265316_10009525 3300031344 Bacteria 8942
78 Ga0307508_10037650 3300031616 Bacteria 4349
79 Ga0265314_10011419 3300031711 Bacteria 7334
80 Ga0316576_10080132 3300031727 Bacteria 2421
81 Ga0316577_10029494 3300031733 Bacteria 3062
82 Ga0307416_100216410 3300032002 Bacteria 1833
83 Ga0307414_10114467 3300032004 Bacteria 2061
84 Ga0316583_10002462 3300032133 Bacteria 6429
85 Ga0316574_0061010 3300035398 Bacteria 2367
86 Ga0373937_0106860 3300036401 Bacteria 2602
87 Ga0316584_0000794 3300036712 Bacteria 17778
88 Ga0316584_0125639 3300036712 Bacteria 1916
89 Ga0316581_0040220 3300037588 Bacteria 1423
90 Ga0395901_0141783 3300038443 Bacteria 2526
91 Ga0395901_0257535 3300038443 Unclassified 1817
92 Ga0450910_000139 3300042147 Bacteria 7840
93 Ga0451577_0000014 3300042876 Bacteria 546755
94 Ga0451577_0008918 3300042876 Bacteria 9706
95 Ga0451577_0026024 3300042876 Bacteria 5301
96 Ga0451577_0054502 3300042876 Bacteria 3569
97 Ga0451577_0086610 3300042876 Bacteria 2795
98 Ga0451577_0152477 3300042876 Bacteria 2079
99 Ga0453683_0000309 3300044673 Bacteria 61392
100 Ga0453683_0001781 3300044673 Bacteria 17831
101 Ga0453683_0010226 3300044673 Bacteria 6225
102 Ga0453683_0057293 3300044673 Bacteria 2438
103 Ga0453684_0000082 3300044712 Bacteria 399380
104 Ga0453684_0001557 3300044712 Bacteria 63979
105 Ga0453684_0004631 3300044712 Bacteria 28592
106 Ga0453684_0011661 3300044712 Bacteria 14667
107 Ga0453684_0020106 3300044712 Bacteria 10102
108 Ga0453684_0024997 3300044712 Bacteria 8691
109 Ga0453684_0079637 3300044712 Bacteria 4095
110 Ga0453684_0088383 3300044712 Bacteria 3837
111 Ga0453684_0107227 3300044712 Bacteria 3402
112 Ga0453684_0147296 3300044712 Bacteria 2802
113 Ga0451576_0000776 3300045051 Bacteria 62832
114 Ga0451576_0018087 3300045051 Bacteria 7734
115 Ga0451576_0027931 3300045051 Bacteria 6052
116 Ga0451576_0049737 3300045051 Bacteria 4399
117 Ga0451576_0050327 3300045051 Bacteria 4369
118 Ga0451576_0150492 3300045051 Bacteria 2427
119 Ga0496104_0000498 3300048907 Bacteria 33953
120 Ga0496105_0000281 3300048908 Bacteria 33474
121 Ga0496106_0335832 3300048909 Bacteria 1213
122 Ga0496108_0001391 3300048911 Bacteria 19030
123 Ga0496108_0052350 3300048911 Bacteria 3421
124 Ga0496109_0001907 3300048912 Bacteria 17322
125 Ga0496110_0013496 3300048913 Bacteria 6758
126 Ga0496112_0000012 3300048915 Bacteria 243643
127 Ga0496112_0001724 3300048915 Bacteria 17092
128 Ga0496112_0033167 3300048915 Bacteria 5018
129 Ga0496113_0001089 3300048916 Bacteria 14704
130 Ga0501040_0027587 3300049576 Bacteria 3824
131 Ga0501041_0166501 3300049577 Bacteria 1379
132 Ga0501042_0150833 3300049578 Bacteria 1676
133 Ga0501067_0032321 3300049583 Bacteria 2905
134 Ga0501068_0031152 3300049584 Bacteria 3167
135 Ga0501068_0075377 3300049584 Unclassified 2064
136 Ga0501069_0139817 3300049585 Bacteria 1389
137 Ga0501071_0015601 3300049587 Bacteria 5217
138 Ga0501071_0089082 3300049587 Bacteria 2264
139 Ga0501071_0181103 3300049587 Bacteria 1579
140 Ga0501075_0006205 3300049591 Bacteria 8215
141 Ga0501075_0115161 3300049591 Bacteria 2044
142 Ga0501076_0059625 3300049592 Bacteria 3036
143 Ga0501076_0060804 3300049592 Bacteria 3006
144 Ga0501076_0207824 3300049592 Bacteria 1599
145 Ga0501077_0159913 3300049593 Bacteria 1430
146 Ga0501079_0019969 3300049741 Bacteria 5120
147 Ga0501079_0166209 3300049741 Bacteria 1721
148 Ga0501080_0041804 3300049742 Bacteria 4270
149 Ga0501080_0100690 3300049742 Bacteria 2681
150 Ga0501081_0135247 3300049743 Unclassified 1764
151 Ga0501045_0032544 3300049824 Bacteria 3779
152 nmdc:mga06r32_17039_c1 3300050510 Bacteria 6631
153 nmdc:mga0a205_10229_c1 3300050515 Bacteria 8619
154 nmdc:mga0a205_140762_c1 3300050515 Archaea 2313
155 Ga0501084_0075990 3300054114 Bacteria 2815
156 Ga0501084_0077457 3300054114 Bacteria 2788
157 Ga0501082_0188747 3300060353 Bacteria 1793
158 Ga0501082_0224164 3300060353 Unclassified 1636
159 Ga0530510_0001671 3300061734 Bacteria 15006
160 Ga0530510_0065693 3300061734 Bacteria 2629
161 Ga0530510_0121217 3300061734 Bacteria 1920
162 Ga0530510_0156607 3300061734 Bacteria 1684
163 Ga0070697_100066599
164 JGI25406J46586_10008334
165 Ga0070676_10084546
166 Ga0070680_100096092
167 Ga0070674_100014884
168 Ga0070705_100024254
169 Ga0070708_100027341
170 Ga0070708_100057513
171 Ga0070708_100091695
172 Ga0070678_100050846
173 Ga0070706_100051133
174 Ga0070707_100003529
175 Ga0070707_100071765
176 Ga0070707_100201340
177 Ga0070698_100016554
178 Ga0070698_100045901
179 Ga0070699_100003054
180 Ga0070679_100045878
181 Ga0070684_100024567
182 Ga0070684_100143360
183 Ga0070697_100003427
184 Ga0070697_100255050
185 Ga0070686_100129391
186 Ga0070695_100021887
187 Ga0070695_100030165
188 Ga0070696_100000731
189 Ga0070696_100011220
190 Ga0070696_100041791
191 Ga0070704_100278888
192 Ga0068856_100233380
193 Ga0068861_100086803
194 Ga0068863_100376566
195 Ga0081539_10001884
196 Ga0075431_100403358
197 Ga0075433_10266120
198 Ga0105245_10020154
199 Ga0105242_10056608
200 Ga0105242_10144363
201 Ga0105248_10372732
202 Ga0105246_10006871
203 Ga0163163_10171719
204 Ga0182008_10099525
205 Ga0163161_10165006
206 Ga0207653_10006825
207 Ga0207645_10037864
208 Ga0207684_10022309
209 Ga0207684_10035161
210 Ga0207684_10259408
211 Ga0207660_10131239
212 Ga0207652_10201991
213 Ga0207646_10021122
214 Ga0207646_10028972
215 Ga0207659_10033592
216 Ga0207711_10296180
217 Ga0207678_10188253
218 Ga0207702_10152447
219 Ga0207675_100031635
220 Ga0207683_10005717
221 Ga0207698_10306963
222 Ga0209998_10003238
223 Ga0209974_10026134
224 Ga0268264_10005027
225 Ga0265319_1000328
226 Ga0265318_10013934
227 Ga0265318_10015074
228 Ga0265318_10021274
229 Ga0265318_10023921
230 Ga0265336_10008804
231 Ga0265324_10004283
232 Ga0265332_10002954
233 Ga0265320_10019092
234 Ga0265325_10007198
235 Ga0265340_10000263
236 Ga0265339_10036481
237 Ga0265339_10059485
238 Ga0265331_10014981
239 Ga0265316_10009525
240 Ga0307508_10037650
241 Ga0265314_10011419
242 Ga0316576_10080132
243 Ga0316577_10029494
244 Ga0307416_100216410
245 Ga0307414_10114467
246 Ga0316583_10002462
247 Ga0316574_0061010
248 Ga0373937_0106860
249 Ga0316584_0000794
250 Ga0316584_0125639
251 Ga0316581_0040220
252 Ga0395901_0141783
253 Ga0395901_0257535
254 Ga0450910_000139
255 Ga0451577_0000014
256 Ga0451577_0008918
257 Ga0451577_0026024
258 Ga0451577_0054502
259 Ga0451577_0086610
260 Ga0451577_0152477
261 Ga0453683_0000309
262 Ga0453683_0001781
263 Ga0453683_0010226
264 Ga0453683_0057293
265 Ga0453684_0000082
266 Ga0453684_0001557
267 Ga0453684_0004631
268 Ga0453684_0011661
269 Ga0453684_0020106
270 Ga0453684_0024997
271 Ga0453684_0079637
272 Ga0453684_0088383
273 Ga0453684_0107227
274 Ga0453684_0147296
275 Ga0451576_0000776
276 Ga0451576_0018087
277 Ga0451576_0027931
278 Ga0451576_0049737
279 Ga0451576_0050327
280 Ga0451576_0150492
281 Ga0496104_0000498
282 Ga0496105_0000281
283 Ga0496106_0335832
284 Ga0496108_0001391
285 Ga0496108_0052350
286 Ga0496109_0001907
287 Ga0496110_0013496
288 Ga0496112_0000012
289 Ga0496112_0001724
290 Ga0496112_0033167
291 Ga0496113_0001089
292 Ga0501040_0027587
293 Ga0501041_0166501
294 Ga0501042_0150833
295 Ga0501067_0032321
296 Ga0501068_0031152
297 Ga0501068_0075377
298 Ga0501069_0139817
299 Ga0501071_0015601
300 Ga0501071_0089082
301 Ga0501071_0181103
302 Ga0501075_0006205
303 Ga0501075_0115161
304 Ga0501076_0059625
305 Ga0501076_0060804
306 Ga0501076_0207824
307 Ga0501077_0159913
308 Ga0501079_0019969
309 Ga0501079_0166209
310 Ga0501080_0041804
311 Ga0501080_0100690
312 Ga0501081_0135247
313 Ga0501045_0032544
314 nmdc:mga06r32_17039_c1
315 nmdc:mga0a205_10229_c1
316 nmdc:mga0a205_140762_c1
317 Ga0501084_0075990
318 Ga0501084_0077457
319 Ga0501082_0188747
320 Ga0501082_0224164
321 Ga0530510_0001671
322 Ga0530510_0065693
323 Ga0530510_0121217
324 Ga0530510_0156607

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01988

VIT1

VIT family

186

396

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
7s5c-assembly1.cif.gz_J m. xanthus ferritin-like protein encb 0.9915 5 60
7s5c-assembly1.cif.gz_F m. xanthus ferritin-like protein encb 0.9901 5 60
7s5c-assembly1.cif.gz_J m. xanthus ferritin-like protein encb 0.9262 5 60
7s5c-assembly1.cif.gz_F m. xanthus ferritin-like protein encb 0.9249 5 60
7tmv-assembly1.cif.gz_B crystal structure of a putative structural protein from klebsiella pneumoniae 0.7655 6 127
ID Description Score Start End Superfamily
af_Q54XF9_6_149_1.20.1260.10 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.8252 6 128 1.20.1260.10
3bt5A00 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.7894 6 131 1.20.1260.10
2ib0B00 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.7636 1 129 1.20.1260.10
2ib0B00 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.7435 1 129 1.20.1260.10
3q4oA00 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.726 1 129 1.20.1260.10
ID Description Score Start End GO Terms
AF-A0A258QTU5-F1-model_v4 Uncharacterized protein 0.9012 1 97
AF-A0A2D6EPE6-F1-model_v4 DUF2383 domain-containing protein 0.8779 6 132
AF-A0A4P5ULV1-F1-model_v4 VIT family protein 0.8353 175 354 GO:0005384
GO:0012505
GO:0016020
GO:0030026
AF-A0A258QTU5-F1-model_v4 Uncharacterized protein 0.8028 1 97
AF-A0A258GBR4-F1-model_v4 VIT family protein 0.8014 170 354 GO:0005384
GO:0012505
GO:0016020
GO:0030026

Map