F235459

General Info

Members Datasets Scaffolds Average Seq Length
160 126 160 149

Family's Representative Sequence

Representative Sequence 3300047472|Ga0495686_0038945|Ga0495686_0038945_870_1400
Length 176
Sequence MPEEDGAGGGAGDAEAAAREPRADGARRSAERTDRLRLVEAFTAHVPHDRALGREMIELTPEAVVFRLPYDPKLVGNPDTGTLHGGAITALLDGASGAAVFAALTELVPIATLDLRIDYLRPAEPGRDVMARATCYRITRNVAFTRAVAYHDDPADPIAHSVGTFMMSTRASGTRP

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
6 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
7 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
8 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
15 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
22 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
25 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
26 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
27 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
36 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
37 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
38 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
39 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
40 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
54 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
55 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
60 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
61 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
62 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
63 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
64 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
65 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
66 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
67 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
68 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
69 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
70 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
71 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
72 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
73 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
74 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
77 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
78 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
79 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
80 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
81 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
82 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
83 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
84 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
85 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
86 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
87 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
88 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
89 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
90 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
91 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
92 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
93 3300049689 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_A_4_drought Metagenome Rhizosphere
94 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
95 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
96 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
97 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
98 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
99 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
100 3300049764 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J12_A_4_control Metagenome Rhizosphere
101 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
102 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
103 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
104 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
105 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
106 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
107 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
108 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
109 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
110 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
111 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
112 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
113 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
114 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
115 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
116 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
117 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
118 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
119 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
120 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
121 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
122 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
123 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
124 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
125 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
126 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 15.62
Nodule 0
Rhizoplane 0.62
Rhizosphere 76.88
Stem 0
Stem Tuber 0
Unclassified 6.88

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10627206 3300005327 Bacteria 932
2 Ga0070683_100300849 3300005329 Unclassified 1526
3 Ga0068869_100013954 3300005334 Bacteria 5359
4 Ga0070666_10801514 3300005335 Bacteria 694
5 Ga0070682_100298280 3300005337 Bacteria 1181
6 Ga0070689_100006519 3300005340 Bacteria 8093
7 Ga0070689_100054308 3300005340 Bacteria 3101
8 Ga0070689_100899008 3300005340 Bacteria 783
9 Ga0070687_100644762 3300005343 Bacteria 733
10 Ga0070669_100764894 3300005353 Bacteria 819
11 Ga0070674_101858769 3300005356 Bacteria 547
12 Ga0070673_100887816 3300005364 Bacteria 826
13 Ga0070673_101280842 3300005364 Bacteria 688
14 Ga0070688_100078014 3300005365 Bacteria 2136
15 Ga0070694_100358797 3300005444 Bacteria 1131
16 Ga0070678_100022825 3300005456 Bacteria 4157
17 Ga0070685_10407323 3300005466 Bacteria 943
18 Ga0070699_100804659 3300005518 Bacteria 860
19 Ga0070679_100031721 3300005530 Bacteria 5223
20 Ga0070697_100815397 3300005536 Bacteria 826
21 Ga0070665_100057841 3300005548 Bacteria 3887
22 Ga0070704_102151697 3300005549 Bacteria 518
23 Ga0068857_100403557 3300005577 Bacteria 1272
24 Ga0068864_101113282 3300005618 Bacteria 786
25 Ga0068861_100051700 3300005719 Bacteria 3120
26 Ga0068870_10352878 3300005840 Unclassified 944
27 Ga0068863_100406752 3300005841 Bacteria 1332
28 Ga0068862_101627702 3300005844 Bacteria 653
29 Ga0081455_10578642 3300005937 Bacteria 736
30 Ga0070717_10014382 3300006028 Bacteria 6088
31 Ga0075428_101017363 3300006844 Bacteria 877
32 Ga0075428_101029087 3300006844 Bacteria 871
33 Ga0075430_100533099 3300006846 Bacteria 968
34 Ga0075429_100027850 3300006880 Bacteria 4905
35 Ga0075429_100076488 3300006880 Bacteria 2915
36 Ga0105245_10000037 3300009098 Bacteria 146480
37 Ga0105245_10094315 3300009098 Bacteria 2758
38 Ga0105245_11637587 3300009098 Bacteria 696
39 Ga0114129_11886038 3300009147 Bacteria 725
40 Ga0105243_10283742 3300009148 Bacteria 1493
41 Ga0105243_10858918 3300009148 Unclassified 899
42 Ga0105242_11036849 3300009176 Unclassified 830
43 Ga0105242_11560994 3300009176 Bacteria 693
44 Ga0105237_10573502 3300009545 Bacteria 1135
45 Ga0105249_10034834 3300009553 Bacteria 4564
46 Ga0105249_10606092 3300009553 Unclassified 1150
47 Ga0105249_10856582 3300009553 Bacteria 974
48 Ga0105246_11543159 3300011119 Bacteria 625
49 Ga0157374_10007874 3300013296 Bacteria 9097
50 Ga0157376_10462594 3300014969 Bacteria 1240
51 Ga0207680_10659381 3300025903 Bacteria 749
52 Ga0207643_10518403 3300025908 Unclassified 763
53 Ga0207652_10029561 3300025921 Bacteria 4584
54 Ga0207687_10000146 3300025927 Bacteria 47110
55 Ga0207687_10055223 3300025927 Bacteria 2782
56 Ga0207686_10922625 3300025934 Bacteria 705
57 Ga0207686_11014226 3300025934 Unclassified 674
58 Ga0207709_10195797 3300025935 Bacteria 1439
59 Ga0207670_10016766 3300025936 Bacteria 4412
60 Ga0207670_10027440 3300025936 Bacteria 3599
61 Ga0207670_10840207 3300025936 Bacteria 767
62 Ga0207711_11404802 3300025941 Bacteria 641
63 Ga0207689_10019339 3300025942 Bacteria 5741
64 Ga0207689_10063883 3300025942 Bacteria 3029
65 Ga0207689_10473019 3300025942 Bacteria 1049
66 Ga0207661_10239355 3300025944 Unclassified 1610
67 Ga0207661_10356988 3300025944 Bacteria 1320
68 Ga0207651_10691227 3300025960 Bacteria 898
69 Ga0207712_10033353 3300025961 Bacteria 3480
70 Ga0207712_10598206 3300025961 Bacteria 954
71 Ga0207641_10377900 3300026088 Bacteria 1356
72 Ga0207676_11409233 3300026095 Unclassified 693
73 Ga0207675_100931044 3300026118 Unclassified 886
74 Ga0207683_10006501 3300026121 Bacteria 10001
75 Ga0268266_10006561 3300028379 Bacteria 10637
76 Ga0268265_11709317 3300028380 Bacteria 635
77 Ga0307515_10471947 3300028794 Bacteria 868
78 Ga0265338_10206596 3300028800 Bacteria 1477
79 Ga0265331_10122638 3300031250 Bacteria 1188
80 Ga0307513_10004662 3300031456 Bacteria 18240
81 Ga0307509_10001844 3300031507 Bacteria 35043
82 Ga0307509_10058938 3300031507 Bacteria 4064
83 Ga0307509_10124458 3300031507 Bacteria 2548
84 Ga0307516_10008092 3300031730 Bacteria 11944
85 Ga0307412_10787833 3300031911 Bacteria 824
86 Ga0307415_100046929 3300032126 Bacteria 2905
87 Ga0373949_0000070 3300035090 Bacteria 37716
88 Ga0373936_0000060 3300035113 Bacteria 52820
89 Ga0395899_0027616 3300037312 Bacteria 4276
90 Ga0395899_0459137 3300037312 Bacteria 833
91 Ga0395900_0528612 3300037418 Bacteria 1126
92 Ga0395898_0381967 3300037466 Bacteria 1343
93 Ga0395901_0017639 3300038443 Bacteria 7289
94 Ga0436365_1195079 3300039437 Bacteria 1032
95 Ga0436365_1844569 3300039437 Bacteria 517
96 Ga0436365_1891847 3300039437 Unclassified 604
97 Ga0436363_0942011 3300039450 Bacteria 1093
98 Ga0451839_1034675 3300041496 Bacteria 624
99 Ga0453684_0271510 3300044712 Bacteria 1938
100 Ga0495638_0369374 3300046460 Bacteria 752
101 Ga0495650_0016719 3300046471 Bacteria 3701
102 Ga0495622_0377064 3300046557 Bacteria 612
103 Ga0495686_0021401 3300047472 Bacteria 4295
104 Ga0495686_0038945 3300047472 Bacteria 3039
105 Ga0496115_0251858 3300048918 Bacteria 1454
106 Ga0501292_053351 3300049515 Bacteria 721
107 Ga0501032_0357521 3300049569 Bacteria 940
108 Ga0501047_0050536 3300049581 Bacteria 4015
109 Ga0501048_0143808 3300049582 Bacteria 1687
110 Ga0501069_0373809 3300049585 Bacteria 842
111 Ga0501070_0013625 3300049586 Bacteria 6852
112 Ga0501070_0031171 3300049586 Bacteria 4466
113 Ga0501070_0076072 3300049586 Bacteria 2779
114 Ga0501070_0076978 3300049586 Bacteria 2761
115 Ga0501071_0305849 3300049587 Bacteria 1206
116 Ga0501072_0190606 3300049588 Bacteria 1635
117 Ga0501074_0368105 3300049590 Bacteria 1020
118 Ga0501217_052301 3300049661 Unclassified 1071
119 Ga0501227_001078 3300049665 Bacteria 6065
120 Ga0501233_007354 3300049668 Bacteria 2093
121 Ga0501260_031931 3300049689 Bacteria 610
122 Ga0501225_0016385 3300049705 Bacteria 2060
123 Ga0501229_017317 3300049706 Bacteria 940
124 Ga0501079_0552377 3300049741 Bacteria 906
125 Ga0501080_0155690 3300049742 Bacteria 2111
126 Ga0501081_0098894 3300049743 Bacteria 2061
127 Ga0501264_040577 3300049761 Unclassified 570
128 Ga0501267_003183 3300049764 Bacteria 1488
129 Ga0501035_0192211 3300049822 Bacteria 1755
130 Ga0501035_1147121 3300049822 Bacteria 605
131 Ga0501044_0005109 3300049823 Bacteria 14635
132 nmdc:mga09592_34297_c1 3300050508 Bacteria 4242
133 nmdc:mga09592_60494_c1 3300050508 Bacteria 3202
134 nmdc:mga0qj67_866617_c1 3300050509 Bacteria 713
135 nmdc:mga0rr50_1016050_c1 3300050513 Bacteria 706
136 Ga0500578_0064437 3300053086 Bacteria 2337
137 Ga0500646_0048134 3300053090 Bacteria 1221
138 Ga0500566_0001651 3300053094 Bacteria 13090
139 Ga0500566_0005258 3300053094 Bacteria 7705
140 Ga0500566_0037031 3300053094 Bacteria 2828
141 Ga0500640_003119 3300053095 Bacteria 5685
142 Ga0500650_0331651 3300053098 Bacteria 668
143 Ga0500554_004205 3300053102 Bacteria 3030
144 Ga0500572_011955 3300053111 Bacteria 2114
145 Ga0500595_000225 3300053119 Bacteria 38629
146 Ga0500597_005028 3300053120 Bacteria 4200
147 Ga0500597_183219 3300053120 Bacteria 887
148 Ga0500614_000303 3300053123 Bacteria 12701
149 Ga0500614_022258 3300053123 Bacteria 1478
150 Ga0500642_0158932 3300053130 Bacteria 1060
151 Ga0500559_0013889 3300053136 Bacteria 3406
152 Ga0500564_123445 3300053138 Bacteria 1126
153 Ga0500568_0032018 3300053139 Bacteria 2164
154 Ga0500590_169989 3300053148 Bacteria 960
155 Ga0500603_044403 3300053150 Bacteria 1196
156 Ga0500619_066878 3300053154 Bacteria 1190
157 Ga0500630_232966 3300053159 Bacteria 675
158 Ga0500639_101817 3300053163 Unclassified 1412
159 Ga0500636_0044661 3300053177 Bacteria 2613
160 Ga0500601_001287 3300053737 Bacteria 2784

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005340 Ga0070689_100054308 Ga0070689_1000543084 135
2 3300005618 Ga0068864_101113282 Ga0068864_1011132822 135
3 3300005329 Ga0070683_100300849 Ga0070683_1003008492 138
4 3300005337 Ga0070682_100298280 Ga0070682_1002982802 138
5 3300005530 Ga0070679_100031721 Ga0070679_1000317215 138
6 3300005577 Ga0068857_100403557 Ga0068857_1004035573 138
7 3300009098 Ga0105245_10000037 Ga0105245_1000003769 138
8 3300009545 Ga0105237_10573502 Ga0105237_105735022 138
9 3300011119 Ga0105246_11543159 Ga0105246_115431591 138
10 3300025921 Ga0207652_10029561 Ga0207652_100295614 138
11 3300025927 Ga0207687_10000146 Ga0207687_1000014619 138
12 3300025944 Ga0207661_10239355 Ga0207661_102393552 138
13 3300037312 Ga0395899_0459137 Ga0395899_0459137_20_448 138
14 3300039437 Ga0436365_1844569 Ga0436365_1844569_53_487 138
15 3300039450 Ga0436363_0942011 Ga0436363_0942011_361_795 138
16 3300049569 Ga0501032_0357521 Ga0501032_0357521_240_668 138
17 3300049581 Ga0501047_0050536 Ga0501047_0050536_2089_2517 138
18 3300049582 Ga0501048_0143808 Ga0501048_0143808_277_705 138
19 3300049586 Ga0501070_0076978 Ga0501070_0076978_645_1073 138
20 3300049741 Ga0501079_0552377 Ga0501079_0552377_461_889 138
21 3300049822 Ga0501035_0192211 Ga0501035_0192211_919_1347 138
22 3300049823 Ga0501044_0005109 Ga0501044_0005109_10160_10588 138
23 3300053120 Ga0500597_005028 Ga0500597_005028_587_1066 138
24 3300005335 Ga0070666_10801514 Ga0070666_108015141 139
25 3300005356 Ga0070674_101858769 Ga0070674_1018587691 139
26 3300005456 Ga0070678_100022825 Ga0070678_1000228253 139
27 3300005548 Ga0070665_100057841 Ga0070665_1000578414 139
28 3300013296 Ga0157374_10007874 Ga0157374_100078743 139
29 3300014969 Ga0157376_10462594 Ga0157376_104625942 139
30 3300025903 Ga0207680_10659381 Ga0207680_106593811 139
31 3300026121 Ga0207683_10006501 Ga0207683_1000650110 139
32 3300028379 Ga0268266_10006561 Ga0268266_1000656111 139
33 3300037312 Ga0395899_0027616 Ga0395899_0027616_2347_2775 139
34 3300037418 Ga0395900_0528612 Ga0395900_0528612_548_976 139
35 3300037466 Ga0395898_0381967 Ga0395898_0381967_492_920 139
36 3300038443 Ga0395901_0017639 Ga0395901_0017639_4146_4574 139
37 3300048918 Ga0496115_0251858 Ga0496115_0251858_178_609 139
38 3300053123 Ga0500614_022258 Ga0500614_022258_578_1057 139
39 3300053177 Ga0500636_0044661 Ga0500636_0044661_1851_2330 139
40 3300005334 Ga0068869_100013954 Ga0068869_1000139543 140
41 3300005340 Ga0070689_100006519 Ga0070689_1000065193 140
42 3300005340 Ga0070689_100899008 Ga0070689_1008990082 140
43 3300005343 Ga0070687_100644762 Ga0070687_1006447621 140
44 3300005353 Ga0070669_100764894 Ga0070669_1007648942 140
45 3300005364 Ga0070673_100887816 Ga0070673_1008878162 140
46 3300005364 Ga0070673_101280842 Ga0070673_1012808422 140
47 3300005365 Ga0070688_100078014 Ga0070688_1000780142 140
48 3300005444 Ga0070694_100358797 Ga0070694_1003587972 140
49 3300005466 Ga0070685_10407323 Ga0070685_104073232 140
50 3300005518 Ga0070699_100804659 Ga0070699_1008046592 140
51 3300005536 Ga0070697_100815397 Ga0070697_1008153971 140
52 3300005549 Ga0070704_102151697 Ga0070704_1021516971 140
53 3300005719 Ga0068861_100051700 Ga0068861_1000517003 140
54 3300005840 Ga0068870_10352878 Ga0068870_103528782 140
55 3300005841 Ga0068863_100406752 Ga0068863_1004067522 140
56 3300005844 Ga0068862_101627702 Ga0068862_1016277021 140
57 3300005937 Ga0081455_10578642 Ga0081455_105786422 140
58 3300006028 Ga0070717_10014382 Ga0070717_100143823 140
59 3300006844 Ga0075428_101017363 Ga0075428_1010173631 140
60 3300006844 Ga0075428_101029087 Ga0075428_1010290872 140
61 3300006846 Ga0075430_100533099 Ga0075430_1005330992 140
62 3300006880 Ga0075429_100027850 Ga0075429_1000278506 140
63 3300006880 Ga0075429_100076488 Ga0075429_1000764884 140
64 3300009098 Ga0105245_10094315 Ga0105245_100943154 140
65 3300009098 Ga0105245_11637587 Ga0105245_116375872 140
66 3300009147 Ga0114129_11886038 Ga0114129_118860381 140
67 3300009148 Ga0105243_10283742 Ga0105243_102837422 140
68 3300009148 Ga0105243_10858918 Ga0105243_108589182 140
69 3300009176 Ga0105242_11036849 Ga0105242_110368491 140
70 3300009176 Ga0105242_11560994 Ga0105242_115609941 140
71 3300009553 Ga0105249_10034834 Ga0105249_100348343 140
72 3300009553 Ga0105249_10606092 Ga0105249_106060922 140
73 3300009553 Ga0105249_10856582 Ga0105249_108565822 140
74 3300025908 Ga0207643_10518403 Ga0207643_105184031 140
75 3300025927 Ga0207687_10055223 Ga0207687_100552232 140
76 3300025934 Ga0207686_10922625 Ga0207686_109226251 140
77 3300025934 Ga0207686_11014226 Ga0207686_110142261 140
78 3300025935 Ga0207709_10195797 Ga0207709_101957972 140
79 3300025936 Ga0207670_10016766 Ga0207670_100167663 140
80 3300025936 Ga0207670_10027440 Ga0207670_100274404 140
81 3300025936 Ga0207670_10840207 Ga0207670_108402071 140
82 3300025941 Ga0207711_11404802 Ga0207711_114048022 140
83 3300025942 Ga0207689_10019339 Ga0207689_100193395 140
84 3300025942 Ga0207689_10063883 Ga0207689_100638834 140
85 3300025942 Ga0207689_10473019 Ga0207689_104730192 140
86 3300025944 Ga0207661_10356988 Ga0207661_103569882 140
87 3300025960 Ga0207651_10691227 Ga0207651_106912272 140
88 3300025961 Ga0207712_10033353 Ga0207712_100333533 140
89 3300025961 Ga0207712_10598206 Ga0207712_105982062 140
90 3300026088 Ga0207641_10377900 Ga0207641_103779002 140
91 3300026095 Ga0207676_11409233 Ga0207676_114092332 140
92 3300026118 Ga0207675_100931044 Ga0207675_1009310442 140
93 3300028380 Ga0268265_11709317 Ga0268265_117093171 140
94 3300028794 Ga0307515_10471947 Ga0307515_104719472 140
95 3300028800 Ga0265338_10206596 Ga0265338_102065962 140
96 3300031250 Ga0265331_10122638 Ga0265331_101226382 140
97 3300031456 Ga0307513_10004662 Ga0307513_100046627 140
98 3300031507 Ga0307509_10001844 Ga0307509_100018449 140
99 3300031507 Ga0307509_10058938 Ga0307509_100589385 140
100 3300031507 Ga0307509_10124458 Ga0307509_101244583 140
101 3300031730 Ga0307516_10008092 Ga0307516_100080928 140
102 3300031911 Ga0307412_10787833 Ga0307412_107878332 140
103 3300032126 Ga0307415_100046929 Ga0307415_1000469293 140
104 3300035090 Ga0373949_0000070 Ga0373949_0000070_8644_9099 140
105 3300035113 Ga0373936_0000060 Ga0373936_0000060_48969_49433 140
106 3300039437 Ga0436365_1195079 Ga0436365_1195079_232_678 140
107 3300039437 Ga0436365_1891847 Ga0436365_1891847_27_482 140
108 3300041496 Ga0451839_1034675 Ga0451839_1034675_44_538 140
109 3300044712 Ga0453684_0271510 Ga0453684_0271510_950_1393 140
110 3300046460 Ga0495638_0369374 Ga0495638_0369374_47_511 140
111 3300046471 Ga0495650_0016719 Ga0495650_0016719_1205_1648 140
112 3300046557 Ga0495622_0377064 Ga0495622_0377064_84_536 140
113 3300047472 Ga0495686_0021401 Ga0495686_0021401_1350_1901 140
114 3300049515 Ga0501292_053351 Ga0501292_053351_244_708 140
115 3300049585 Ga0501069_0373809 Ga0501069_0373809_110_553 140
116 3300049586 Ga0501070_0013625 Ga0501070_0013625_683_1126 140
117 3300049586 Ga0501070_0031171 Ga0501070_0031171_656_1099 140
118 3300049586 Ga0501070_0076072 Ga0501070_0076072_1989_2450 140
119 3300049587 Ga0501071_0305849 Ga0501071_0305849_551_997 140
120 3300049588 Ga0501072_0190606 Ga0501072_0190606_299_742 140
121 3300049590 Ga0501074_0368105 Ga0501074_0368105_306_749 140
122 3300049661 Ga0501217_052301 Ga0501217_052301_155_613 140
123 3300049665 Ga0501227_001078 Ga0501227_001078_4987_5451 140
124 3300049668 Ga0501233_007354 Ga0501233_007354_843_1307 140
125 3300049689 Ga0501260_031931 Ga0501260_031931_96_551 140
126 3300049705 Ga0501225_0016385 Ga0501225_0016385_712_1176 140
127 3300049706 Ga0501229_017317 Ga0501229_017317_273_737 140
128 3300049742 Ga0501080_0155690 Ga0501080_0155690_849_1292 140
129 3300049743 Ga0501081_0098894 Ga0501081_0098894_344_787 140
130 3300049761 Ga0501264_040577 Ga0501264_040577_42_500 140
131 3300049764 Ga0501267_003183 Ga0501267_003183_162_617 140
132 3300049822 Ga0501035_1147121 Ga0501035_1147121_75_536 140
133 3300050508 nmdc:mga09592_34297_c1 nmdc:mga09592_34297_c1_2263_2703 140
134 3300050508 nmdc:mga09592_60494_c1 nmdc:mga09592_60494_c1_2022_2465 140
135 3300050509 nmdc:mga0qj67_866617_c1 nmdc:mga0qj67_866617_c1_57_524 140
136 3300050513 nmdc:mga0rr50_1016050_c1 nmdc:mga0rr50_1016050_c1_116_562 140
137 3300053086 Ga0500578_0064437 Ga0500578_0064437_56_577 140
138 3300053090 Ga0500646_0048134 Ga0500646_0048134_245_751 140
139 3300053094 Ga0500566_0001651 Ga0500566_0001651_10800_11273 140
140 3300053094 Ga0500566_0005258 Ga0500566_0005258_3610_4080 140
141 3300053094 Ga0500566_0037031 Ga0500566_0037031_178_624 140
142 3300053095 Ga0500640_003119 Ga0500640_003119_4128_4601 140
143 3300053098 Ga0500650_0331651 Ga0500650_0331651_157_645 140
144 3300053102 Ga0500554_004205 Ga0500554_004205_822_1295 140
145 3300053111 Ga0500572_011955 Ga0500572_011955_1506_1979 140
146 3300053119 Ga0500595_000225 Ga0500595_000225_18251_18724 140
147 3300053120 Ga0500597_183219 Ga0500597_183219_47_520 140
148 3300053123 Ga0500614_000303 Ga0500614_000303_3849_4322 140
149 3300053130 Ga0500642_0158932 Ga0500642_0158932_137_583 140
150 3300053136 Ga0500559_0013889 Ga0500559_0013889_2240_2713 140
151 3300053138 Ga0500564_123445 Ga0500564_123445_240_710 140
152 3300053139 Ga0500568_0032018 Ga0500568_0032018_1627_2124 140
153 3300053148 Ga0500590_169989 Ga0500590_169989_374_844 140
154 3300053150 Ga0500603_044403 Ga0500603_044403_141_611 140
155 3300053154 Ga0500619_066878 Ga0500619_066878_61_534 140
156 3300053159 Ga0500630_232966 Ga0500630_232966_155_601 140
157 3300053163 Ga0500639_101817 Ga0500639_101817_892_1338 140
158 3300053737 Ga0500601_001287 Ga0500601_001287_2007_2480 140
159 3300005327 Ga0070658_10627206 Ga0070658_106272062 141
160 3300047472 Ga0495686_0038945 Ga0495686_0038945_870_1400 141

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03061

4HBT

Thioesterase superfamily

80

158

0.96

PF13622

4HBT_3

Acyl-CoA thioesterase N-terminal domain

75

166

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
1zki-assembly1.cif.gz_B structure of conserved protein pa5202 from pseudomonas aeruginosa 0.9375 11 136
2dsl-assembly1.cif.gz_A mutant n33d structure of phenylacetic acid degradation protein paai from thermus thermophilus hb8 0.9216 16 135
3e29-assembly1.cif.gz_D x-ray structure of the protein q7we92_borbr from thioesterase superfamily. northeast structural genomics consortium target bor214a. 0.9141 6 135
3f1t-assembly1.cif.gz_C crystal structure of the q9i3c8_pseae protein from pseudomonas aeruginosa. northeast structural genomics consortium target par319a. 0.9134 8 135
3nwz-assembly2.cif.gz_C crystal structure of bh2602 protein from bacillus halodurans with coa, northeast structural genomics consortium target bhr199 0.9132 34 136
ID Description Score Start End Superfamily
1zkiB00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.9183 13 136 3.10.129.10
3dkzB00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.9122 14 136 3.10.129.10
3f1tC00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.9076 8 134 3.10.129.10
3e29D00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.9017 7 135 3.10.129.10
3e1eD00 Alpha Beta;Roll;Thiol Ester Dehydrase; Chain A;Hotdog Thioesterase 0.8983 6 136 3.10.129.10
ID Description Score Start End GO Terms
AF-A0A7W0WT58-F1-model_v4 PaaI family thioesterase 0.9969 25 141 GO:0005829
GO:0061522
AF-A0A538PHZ1-F1-model_v4 PaaI family thioesterase 0.9958 45 141 GO:0005829
GO:0061522
AF-A0A7W0Q6K4-F1-model_v4 PaaI family thioesterase 0.9896 6 140 GO:0005829
GO:0061522
AF-A0A7W0VTK4-F1-model_v4 PaaI family thioesterase 0.9844 6 140 GO:0005829
GO:0061522
AF-A0A7Y6UFP5-F1-model_v4 PaaI family thioesterase 0.983 2 139 GO:0005829
GO:0061522

Feature Viewer

pLDDT pTM Quality
90.31 0.86 High
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Predicted Structure (AlphaFold2)

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