F227862

General Info

Members Datasets Scaffolds Average Seq Length
157 135 124 507

Family's Representative Sequence

Representative Sequence 3300039453|Ga0436362_1194535|Ga0436362_1194535_5425_7197
Length 590
Sequence LSDPCNRSSGRGHDETFPNARAVVDHVSVSAAGATFCLLLFRDCSEQFGSIAGGAAPFRIKVGLRIGVESNDDHLSRQMDKLERSIQVRLCGWMTALAMFAASSVDAAELKTTDFTLIDRLTWGVTPSSAEHLKAVGVDRWIEEQLHPQATLALPPLVQSQIEGMPDVHKFPFDIAVSFDQQAKSANQVADPDQKRAAQQVFQQAMNDRARQAAARTILRALYGPDQLRERMVWFWFNHFNVHQYKGNIRILVGDYEDRAIRSYAMGRFRDLLSATLHHPAMLRYLDNADNEVGHVNENYAREIMELHTMGVGSGYTQADVEQLARILTGVGIDLQQEDPKLKPELQNQLVREGAFEFNPARHDFGDKLFLGHAIKGRGFAEVDEALDILCRQPATATHLSQKLATYFVSDTPPAALVQRMAQTFQRTDGDITAVLSTMVHSPEFAASLKGGAKFKDAVQYVMSAVRMAYDDKVILNTTPIQNWLNRLSEGLFNHQTPDGYPLTSATWNSPGQMMVRFEIARQIGSGSAGLFKPDVPNATEQPAFPLIQNALFFESLRQTLSTPTLAALDQAVSPQDWNTLFLSSPEFMH

Samples

Sample ID Description Type Environment
1 2524023205 Bradyrhizobium sp. Cp5.3 Isolate Nodule
2 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
3 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
4 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
5 2585428062 Methylibium sp. CF059 Isolate Rhizosphere
6 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
7 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
8 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
9 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
10 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
11 2791355197 Bradyrhizobium sp. C9 Isolate Nodule
12 2844315083 Bradyrhizobium guangzhouense CCBAU 51670 Isolate Unclassified
13 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
14 2889306138 Methylobacterium sp. PvR107 Isolate Rhizosphere
15 2902330777 Methylobacterium sp. 2A Isolate Unclassified
16 2902405164 Methylobacterium sp. P1-11 Isolate Unclassified
17 2903727486 Bradyrhizobium guangzhouense CCBAU 53424 Isolate Unclassified
18 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
19 2904699407
20 2906602504 Bradyrhizobium guangzhouense CCBAU 53426 Isolate Unclassified
21 2906610324
22 2908739725 Bradyrhizobium sp. UFLA03-84 Isolate Nodule
23 2922425934
24 2928125067 Methylobacterium sp. 1973 Isolate Unclassified
25 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
26 3002141150 Phyllobacterium sp. 628 Isolate Unclassified
27 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
28 3005594810 Bradyrhizobium sp. CCBAU 53340 Isolate Nodule
29 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
30 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
31 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
34 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
35 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
39 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
40 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
41 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
42 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
43 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
44 3300021358 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 Metagenome Rhizosphere
45 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
46 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
47 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
48 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
51 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
53 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
54 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
55 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
62 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
63 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
64 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
65 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
66 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
67 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
68 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
69 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
70 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
71 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
72 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
73 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
74 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
75 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
76 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
77 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
78 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
79 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
80 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
81 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
82 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
83 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
84 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
85 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
86 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
87 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
88 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
89 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
90 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
91 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
92 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
93 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
94 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
95 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
96 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
97 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
98 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
99 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
100 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
101 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
104 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
105 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
106 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
107 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
108 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
109 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
110 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
111 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
112 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
113 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
114 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
115 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
116 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
117 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
118 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
119 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
120 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
121 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
122 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
123 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
124 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
125 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
126 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
127 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
128 3300053739 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 endosphere Metagenome Endosphere
129 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
130 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
131 641522639 Methylobacterium sp. 4-46 Isolate Nodule
132 8006933436 Bradyrhizobium septentrionale 7(2017) Isolate Unclassified
133 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
134 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
135 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 80.52
Metatranscriptomes 0
Isolates 19.48

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.38
Nodule 8.28
Rhizoplane 1.91
Rhizosphere 45.86
Stem 0
Stem Tuber 0
Unclassified 23.57

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055526_1000016 3300003771 Bacteria 213710
2 Ga0070713_100003808 3300005436 Bacteria 9979
3 Ga0070706_100068712 3300005467 Bacteria 3276
4 Ga0070698_100013746 3300005471 Bacteria 8569
5 Ga0070697_100109629 3300005536 Bacteria 2299
6 Ga0068855_100059962 3300005563 Bacteria 4451
7 Ga0068857_100127555 3300005577 Bacteria 2293
8 Ga0068852_100013543 3300005616 Bacteria 6243
9 Ga0070717_10000296 3300006028 Bacteria 33438
10 Ga0099794_10052481 3300007265 Bacteria 1965
11 Ga0105240_10068474 3300009093 Bacteria 4396
12 Ga0105241_10031698 3300009174 Bacteria 3958
13 Ga0105239_10059280 3300010375 Bacteria 4201
14 Ga0157369_10002124 3300013105 Bacteria 23888
15 Ga0157378_10006063 3300013297 Bacteria 10593
16 Ga0213873_10000638 3300021358 Bacteria 5744
17 Ga0213872_10030598 3300021361 Bacteria 2467
18 Ga0213876_10000210 3300021384 Bacteria 58885
19 Ga0207425_1000330 3300025245 Bacteria 33378
20 Ga0209677_100844 3300025253 Bacteria 15185
21 Ga0209148_1000625 3300025254 Bacteria 31329
22 Ga0209233_1006513 3300025261 Bacteria 3758
23 Ga0209233_1013996 3300025261 Bacteria 2275
24 Ga0209455_1005725 3300025272 Bacteria 3784
25 Ga0209455_1013615 3300025272 Bacteria 1879
26 Ga0209025_1011948 3300025294 Bacteria 5641
27 Ga0209564_1000002 3300025295 Bacteria 1636803
28 Ga0209758_1000985 3300025297 Bacteria 38269
29 Ga0209758_1005215 3300025297 Bacteria 10203
30 Ga0207695_10000029 3300025913 Bacteria 548364
31 Ga0207671_10009317 3300025914 Bacteria 8218
32 Ga0207700_10049593 3300025928 Bacteria 3124
33 Ga0207700_10052951 3300025928 Bacteria 3038
34 Ga0207678_10005544 3300026067 Bacteria 11277
35 Ga0207674_10059702 3300026116 Bacteria 3858
36 Ga0207698_10009751 3300026142 Bacteria 6134
37 Ga0265334_10009821 3300028573 Bacteria 4045
38 Ga0307515_10008318 3300028794 Bacteria 20246
39 Ga0307515_10017807 3300028794 Bacteria 12914
40 Ga0307515_10021820 3300028794 Bacteria 11327
41 Ga0307515_10040677 3300028794 Bacteria 7342
42 Ga0265338_10021868 3300028800 Bacteria 6648
43 Ga0265328_10012136 3300031239 Bacteria 3431
44 Ga0265339_10034814 3300031249 Bacteria 2828
45 Ga0265327_10000178 3300031251 Bacteria 135732
46 Ga0307513_10014838 3300031456 Bacteria 9477
47 Ga0265314_10003656 3300031711 Bacteria 14771
48 Ga0265314_10062179 3300031711 Bacteria 2539
49 Ga0265342_10005687 3300031712 Bacteria 9430
50 Ga0307516_10017414 3300031730 Bacteria 7492
51 Ga0307510_10054814 3300033180 Bacteria 4171
52 Ga0373927_0008502 3300035695 Bacteria 6905
53 Ga0395899_0057003 3300037312 Bacteria 2885
54 Ga0395900_0007174 3300037418 Bacteria 11550
55 Ga0395898_0044148 3300037466 Bacteria 4390
56 Ga0436364_0745359 3300037853 Bacteria 8478
57 Ga0395901_0009614 3300038443 Bacteria 9807
58 Ga0436365_1295508 3300039437 Bacteria 20700
59 Ga0436365_1504556 3300039437 Bacteria 4906
60 Ga0436360_0217114 3300039438 Bacteria 3885
61 Ga0436361_0154462 3300039447 Bacteria 1758
62 Ga0436363_0859853 3300039450 Bacteria 3964
63 Ga0436362_0645573 3300039453 Bacteria 4913
64 Ga0436362_1194535 3300039453 Bacteria 11402
65 Ga0466966_0000472 3300044684 Bacteria 25856
66 Ga0466966_0083077 3300044684 Bacteria 1993
67 Ga0466961_0000240 3300044693 Bacteria 36762
68 Ga0466971_0047461 3300044719 Bacteria 1930
69 Ga0466960_0020651 3300044901 Bacteria 2921
70 Ga0466959_0004641 3300045049 Bacteria 9241
71 Ga0466959_0007050 3300045049 Bacteria 7856
72 Ga0495590_0002575 3300046457 Bacteria 7494
73 Ga0495638_0000501 3300046460 Bacteria 46482
74 Ga0495651_0057638 3300046462 Bacteria 2982
75 Ga0495610_0007765 3300046512 Bacteria 7079
76 Ga0495631_0002682 3300046518 Bacteria 9897
77 Ga0495637_0046911 3300046520 Bacteria 1826
78 Ga0495643_0004763 3300046522 Bacteria 9371
79 Ga0495640_0011773 3300046533 Bacteria 6712
80 Ga0495622_0026572 3300046557 Bacteria 2701
81 Ga0495668_0003864 3300046616 Bacteria 10947
82 Ga0495625_0001892 3300046660 Bacteria 23675
83 Ga0495625_0005584 3300046660 Bacteria 11409
84 Ga0495625_0014112 3300046660 Bacteria 6393
85 Ga0495623_0090011 3300046679 Bacteria 1885
86 Ga0495686_0000325 3300047472 Bacteria 78833
87 Ga0495686_0001385 3300047472 Bacteria 26913
88 Ga0495602_0069968 3300048088 Bacteria 3006
89 Ga0496105_0000604 3300048908 Bacteria 23990
90 Ga0496115_0052150 3300048918 Bacteria 3281
91 Ga0496118_0015922 3300048921 Bacteria 6929
92 Ga0496119_0009203 3300048922 Bacteria 8526
93 Ga0496120_0036686 3300048923 Bacteria 2915
94 Ga0496121_0000176 3300048924 Bacteria 142585
95 Ga0496121_0011087 3300048924 Bacteria 10056
96 Ga0496121_0043883 3300048924 Bacteria 3865
97 Ga0496121_0099865 3300048924 Bacteria 2242
98 Ga0496121_0113634 3300048924 Bacteria 2060
99 Ga0496124_0004606 3300048927 Bacteria 15973
100 Ga0496125_0108584 3300048928 Bacteria 2018
101 Ga0496126_0050004 3300048929 Bacteria 3813
102 Ga0495678_000370 3300049459 Bacteria 45983
103 Ga0501047_0075955 3300049581 Bacteria 3233
104 Ga0500578_0002315 3300053086 Bacteria 16296
105 Ga0500644_0005537 3300053088 Bacteria 3193
106 Ga0500651_0000981 3300053093 Bacteria 14040
107 Ga0500566_0002846 3300053094 Bacteria 10302
108 Ga0500562_003153 3300053108 Bacteria 4118
109 Ga0500572_000049 3300053111 Bacteria 36078
110 Ga0500594_0000095 3300053118 Bacteria 26083
111 Ga0500595_000108 3300053119 Bacteria 56897
112 Ga0500595_002069 3300053119 Bacteria 10248
113 Ga0500595_003920 3300053119 Bacteria 6820
114 Ga0500559_0000246 3300053136 Bacteria 42730
115 Ga0500590_021721 3300053148 Bacteria 3331
116 Ga0500622_0000984 3300053156 Bacteria 24183
117 Ga0500638_009919 3300053162 Bacteria 4146
118 Ga0500636_0014725 3300053177 Bacteria 4602
119 Ga0500637_0000171 3300053178 Bacteria 24172
120 Ga0500637_0051226 3300053178 Bacteria 2353
121 Ga0500596_001343 3300053735 Bacteria 4948
122 Ga0500587_001042 3300053739 Bacteria 3773
123 Ga0500661_000551 3300055283 Bacteria 6991
124 Ga0466962_0011103 3300061719 Bacteria 4334

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046457 Ga0495590_0002575 Ga0495590_0002575_47_1408 452
2 3300053119 Ga0500595_003920 Ga0500595_003920_2382_3866 458
3 3300037312 Ga0395899_0057003 Ga0395899_0057003_1297_2817 461
4 3300053148 Ga0500590_021721 Ga0500590_021721_1146_2750 464
5 3300009093 Ga0105240_10068474 Ga0105240_100684743 465
6 3300046522 Ga0495643_0004763 Ga0495643_0004763_3228_4829 465
7 3300005563 Ga0068855_100059962 Ga0068855_1000599625 469
8 3300026067 Ga0207678_10005544 Ga0207678_100055447 469
9 3300028794 Ga0307515_10008318 Ga0307515_1000831817 470
10 3300045049 Ga0466959_0004641 Ga0466959_0004641_3217_4767 471
11 3300031711 Ga0265314_10003656 Ga0265314_100036565 473
12 3300005616 Ga0068852_100013543 Ga0068852_1000135433 474
13 3300009174 Ga0105241_10031698 Ga0105241_100316983 474
14 3300010375 Ga0105239_10059280 Ga0105239_100592802 474
15 3300025913 Ga0207695_10000029 Ga0207695_10000029278 474
16 3300025914 Ga0207671_10009317 Ga0207671_100093175 474
17 3300026142 Ga0207698_10009751 Ga0207698_100097512 474
18 3300028794 Ga0307515_10017807 Ga0307515_1001780710 474
19 3300046462 Ga0495651_0057638 Ga0495651_0057638_1252_2799 474
20 3300046533 Ga0495640_0011773 Ga0495640_0011773_3978_5525 474
21 3300046557 Ga0495622_0026572 Ga0495622_0026572_708_2255 474
22 3300048088 Ga0495602_0069968 Ga0495602_0069968_205_1752 474
23 3300048908 Ga0496105_0000604 Ga0496105_0000604_16030_17577 474
24 3300048922 Ga0496119_0009203 Ga0496119_0009203_4199_5746 474
25 3300048923 Ga0496120_0036686 Ga0496120_0036686_181_1728 474
26 3300048924 Ga0496121_0113634 Ga0496121_0113634_113_1660 474
27 3300048928 Ga0496125_0108584 Ga0496125_0108584_107_1654 474
28 3300053111 Ga0500572_000049 Ga0500572_000049_21579_23186 474
29 3300053136 Ga0500559_0000246 Ga0500559_0000246_11474_13081 474
30 3300053735 Ga0500596_001343 Ga0500596_001343_666_2273 474
31 3300031456 Ga0307513_10014838 Ga0307513_100148385 476
32 3300025272 Ga0209455_1005725 Ga0209455_10057251 477
33 3300025297 Ga0209758_1000985 Ga0209758_100098510 477
34 3300031730 Ga0307516_10017414 Ga0307516_100174149 477
35 3300044684 Ga0466966_0000472 Ga0466966_0000472_6975_8447 477
36 3300044693 Ga0466961_0000240 Ga0466961_0000240_5803_7275 477
37 3300045049 Ga0466959_0007050 Ga0466959_0007050_3024_4496 477
38 3300046660 Ga0495625_0001892 Ga0495625_0001892_13394_15022 477
39 3300053739 Ga0500587_001042 Ga0500587_001042_1081_2712 477
40 iso_pu_bacteria 2844315083 2844317529 477
41 iso_pu_bacteria 2902405164 2902409079 478
42 3300048918 Ga0496115_0052150 Ga0496115_0052150_473_2020 479
43 iso_pu_bacteria 2928125067 2928129422 479
44 3300007265 Ga0099794_10052481 Ga0099794_100524812 480
45 3300031239 Ga0265328_10012136 Ga0265328_100121362 480
46 3300031251 Ga0265327_10000178 Ga0265327_1000017862 480
47 3300048924 Ga0496121_0000176 Ga0496121_0000176_28296_29777 480
48 3300053093 Ga0500651_0000981 Ga0500651_0000981_4572_6056 480
49 3300053119 Ga0500595_000108 Ga0500595_000108_3714_5198 480
50 3300037418 Ga0395900_0007174 Ga0395900_0007174_2563_4077 481
51 3300037466 Ga0395898_0044148 Ga0395898_0044148_1204_2718 481
52 3300038443 Ga0395901_0009614 Ga0395901_0009614_1096_2610 481
53 3300048921 Ga0496118_0015922 Ga0496118_0015922_2733_4289 481
54 3300048924 Ga0496121_0043883 Ga0496121_0043883_248_1804 481
55 3300053094 Ga0500566_0002846 Ga0500566_0002846_2256_3743 481
56 3300053119 Ga0500595_002069 Ga0500595_002069_1695_3182 481
57 3300053162 Ga0500638_009919 Ga0500638_009919_1931_3418 481
58 3300053178 Ga0500637_0000171 Ga0500637_0000171_3006_4493 481
59 3300055283 Ga0500661_000551 Ga0500661_000551_1945_3432 481
60 3300025253 Ga0209677_100844 Ga0209677_1008442 482
61 3300025254 Ga0209148_1000625 Ga0209148_100062512 482
62 3300044901 Ga0466960_0020651 Ga0466960_0020651_1191_2720 483
63 3300046460 Ga0495638_0000501 Ga0495638_0000501_38153_39634 483
64 iso_pu_bacteria 2903748898 2903756583 483
65 3300025245 Ga0207425_1000330 Ga0207425_10003302 484
66 3300025294 Ga0209025_1011948 Ga0209025_10119482 484
67 3300025297 Ga0209758_1005215 Ga0209758_10052151 484
68 3300005467 Ga0070706_100068712 Ga0070706_1000687121 485
69 3300005471 Ga0070698_100013746 Ga0070698_1000137462 485
70 3300005536 Ga0070697_100109629 Ga0070697_1001096292 485
71 3300021384 Ga0213876_10000210 Ga0213876_1000021045 485
72 3300039437 Ga0436365_1295508 Ga0436365_1295508_9746_11284 485
73 3300053178 Ga0500637_0051226 Ga0500637_0051226_225_1724 485
74 3300039453 Ga0436362_0645573 Ga0436362_0645573_3252_4757 487
75 3300046512 Ga0495610_0007765 Ga0495610_0007765_619_2112 487
76 3300049459 Ga0495678_000370 Ga0495678_000370_14042_15535 487
77 3300053086 Ga0500578_0002315 Ga0500578_0002315_14146_15639 487
78 3300053118 Ga0500594_0000095 Ga0500594_0000095_16177_17670 487
79 3300047472 Ga0495686_0000325 Ga0495686_0000325_65783_67333 488
80 iso_pu_bacteria 2545555834 2545674985 488
81 iso_pu_bacteria 641522639 641645313 488
82 3300006028 Ga0070717_10000296 Ga0070717_1000029630 489
83 3300025928 Ga0207700_10049593 Ga0207700_100495932 489
84 3300035695 Ga0373927_0008502 Ga0373927_0008502_3109_4746 489
85 3300025261 Ga0209233_1013996 Ga0209233_10139962 490
86 3300025272 Ga0209455_1013615 Ga0209455_10136151 490
87 3300028794 Ga0307515_10021820 Ga0307515_100218206 490
88 3300028794 Ga0307515_10040677 Ga0307515_100406775 490
89 3300046518 Ga0495631_0002682 Ga0495631_0002682_1958_3538 490
90 3300046520 Ga0495637_0046911 Ga0495637_0046911_33_1565 490
91 3300046616 Ga0495668_0003864 Ga0495668_0003864_1175_2755 490
92 3300047472 Ga0495686_0001385 Ga0495686_0001385_16754_18334 490
93 3300048924 Ga0496121_0099865 Ga0496121_0099865_618_2150 490
94 3300053088 Ga0500644_0005537 Ga0500644_0005537_857_2437 490
95 3300053108 Ga0500562_003153 Ga0500562_003153_1116_2696 490
96 iso_pu_bacteria 2582581279 2585148058 490
97 iso_pu_bacteria 2928531327 2928533564 490
98 3300013297 Ga0157378_10006063 Ga0157378_100060639 491
99 iso_pu_bacteria 2585428106 2587918632 491
100 iso_pu_bacteria 2902330777 2902335853 491
101 iso_pu_bacteria 3002141150 3002145313 491
102 3300005577 Ga0068857_100127555 Ga0068857_1001275552 492
103 3300025261 Ga0209233_1006513 Ga0209233_10065132 492
104 3300026116 Ga0207674_10059702 Ga0207674_100597022 492
105 3300031249 Ga0265339_10034814 Ga0265339_100348142 492
106 3300031712 Ga0265342_10005687 Ga0265342_100056872 492
107 3300046660 Ga0495625_0005584 Ga0495625_0005584_2019_3530 492
108 iso_pu_bacteria 2524023228 2524534655 492
109 iso_pu_bacteria 2595698237 2596373978 492
110 iso_pu_bacteria 2667528175 2671119304 492
111 iso_pu_bacteria 2728368998 2728748768 492
112 iso_pu_bacteria 2791355197 2793071979 492
113 iso_pu_bacteria 2885374607 2885375489 492
114 iso_pu_bacteria 2889306138 2889308242 492
115 iso_pu_bacteria 2904699407 2904706138 492
116 iso_pu_bacteria 2906610324 2906611619 492
117 iso_pu_bacteria 2908739725 2908745204 492
118 iso_pu_bacteria 2922425934 2922427727 492
119 iso_pu_bacteria 3005474847 3005477443 492
120 iso_pu_bacteria 8006933436 8006933792 492
121 iso_pu_bacteria 8006973647 8006983464 492
122 iso_pu_bacteria 8019555841 8019559719 492
123 iso_pu_bacteria 8019565922 8019569828 492
124 3300005436 Ga0070713_100003808 Ga0070713_10000380810 493
125 3300013105 Ga0157369_10002124 Ga0157369_1000212410 493
126 3300025928 Ga0207700_10052951 Ga0207700_100529512 493
127 3300033180 Ga0307510_10054814 Ga0307510_100548141 493
128 3300037853 Ga0436364_0745359 Ga0436364_0745359_1698_3248 493
129 3300039447 Ga0436361_0154462 Ga0436361_0154462_21_1586 493
130 3300039450 Ga0436363_0859853 Ga0436363_0859853_1181_2734 493
131 3300046679 Ga0495623_0090011 Ga0495623_0090011_260_1810 493
132 3300053177 Ga0500636_0014725 Ga0500636_0014725_2060_3595 493
133 3300021358 Ga0213873_10000638 Ga0213873_100006384 494
134 3300021361 Ga0213872_10030598 Ga0213872_100305982 494
135 3300028800 Ga0265338_10021868 Ga0265338_100218684 494
136 3300039438 Ga0436360_0217114 Ga0436360_0217114_1323_2876 494
137 3300039453 Ga0436362_1194535 Ga0436362_1194535_5425_7197 494
138 3300046660 Ga0495625_0014112 Ga0495625_0014112_3523_5040 494
139 3300049581 Ga0501047_0075955 Ga0501047_0075955_221_1777 494
140 3300053156 Ga0500622_0000984 Ga0500622_0000984_201_1718 494
141 iso_pu_bacteria 2524023205 2524439248 494
142 iso_pu_bacteria 2744054633 2745076703 494
143 iso_pu_bacteria 2903727486 2903733082 494
144 iso_pu_bacteria 2906602504 2906603934 494
145 iso_pu_bacteria 3005594810 3005597266 494
146 3300028573 Ga0265334_10009821 Ga0265334_100098212 495
147 3300031711 Ga0265314_10062179 Ga0265314_100621792 495
148 3300048924 Ga0496121_0011087 Ga0496121_0011087_4174_5736 495
149 3300048929 Ga0496126_0050004 Ga0496126_0050004_99_1727 495
150 3300039437 Ga0436365_1504556 Ga0436365_1504556_2939_4519 497
151 3300044684 Ga0466966_0083077 Ga0466966_0083077_213_1772 500
152 3300044719 Ga0466971_0047461 Ga0466971_0047461_171_1724 500
153 3300061719 Ga0466962_0011103 Ga0466962_0011103_998_2551 500
154 3300003771 Ga0055526_1000016 Ga0055526_100001652 503
155 3300025295 Ga0209564_1000002 Ga0209564_10000021354 503
156 3300048927 Ga0496124_0004606 Ga0496124_0004606_2476_4056 503
157 iso_pu_bacteria 2585428062 2587757665 503

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08811

DUF1800

Protein of unknown function (DUF1800)

116

590

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6m6u-assembly1.cif.gz_I crystal structure the toxin-antitoxin mnta-hpet mutant-d39ed41e 0.3718 69 187
5yqg-assembly1.cif.gz_A the structure of 14-3-3 and pnumb peptide 0.353 28 199
6m6u-assembly1.cif.gz_I crystal structure the toxin-antitoxin mnta-hpet mutant-d39ed41e 0.3503 69 187
5yqg-assembly1.cif.gz_A the structure of 14-3-3 and pnumb peptide 0.2939 28 199
8dgp-assembly2.cif.gz_D 14-3-3 epsilon bound to phosphorylated peak3 (ps69) peptide 0.2861 28 237
ID Description Score Start End Superfamily
af_A0A1D8PK25_22_146_1.20.58.70 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.403 57 176 1.20.58.70
af_A0A1D8PK25_22_146_1.20.58.70 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1; 0.331 57 176 1.20.58.70
af_Q9VU33_17_159_1.20.1310.10 Mainly Alpha;Up-down Bundle;5 helical Cullin repeat like;Cullin Repeats 0.2972 57 195 1.20.1310.10
af_Q9I9H8_452_591_1.25.40.370 Mainly Alpha;Alpha Horseshoe;Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat; 0.2693 86 191 1.25.40.370
af_Q9VDC9_584_785_1.20.58.240 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;STAT; domain 1 0.269 52 175 1.20.58.240
ID Description Score Start End GO Terms
AF-C9YBW2-F1-model_v4 DUF1800 domain-containing protein 0.9898 34 500
AF-A0A5C8SZX5-F1-model_v4 DUF1800 domain-containing protein 0.9861 113 309
AF-A0A2M8V7C3-F1-model_v4 deleted 0.9858 84 350
AF-A0A7Y4IRA9-F1-model_v4 DUF1800 family protein 0.9805 74 204
AF-C9YBW2-F1-model_v4 DUF1800 domain-containing protein 0.9794 34 500

Feature Viewer

pLDDT pTM Quality
91.52 0.91 High
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Predicted Structure (AlphaFold2)

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