F218627

General Info

Members Datasets Scaffolds Average Seq Length
154 114 141 487

Family's Representative Sequence

Representative Sequence 3300005295|Ga0065707_10086896|Ga0065707_100868963
Length 527
Sequence VRRRISRPAKPGACRLYLSFNRKGDPVVLPLDAHNRELIDNVHPADWVNPQPASRYNLVVIGAGTAGLVTAAGAAGLGARVALVERHLLGGDCLNYGCVPSKCVIRSSRVAGELQKAAKLGFVFPGEARAEFSTVMERMRRLRARISHHDSAERFRSLGVDVFLGEARFTMPDTVQVGGKALRFKRAVVATGARAVHPPIPGIAEAGYHTNETIFSLTELPARLGVIGGGPVGCELAQAFRRLGSEVVLFQGASRLLNREDSDAAEILRQTFLREGIRLALNSRPVRVERSAAGKTLILSTPSGEERIEVDEILVGAGRAPNVAGMNLEGVGVAYDARKGIQVDDSLRTTNPRIFAAGDVCLEDKHTHGADAAARIVIQNALFLGRKKLSSLVIPRCTYTDPEIAQVGMSGEQARESGVDVTTFLRPFSEVDRAIVDGEEDGFVKVHVRSGSDKIVGATIVAPHAGEMIGEITLAMVGGLGLGTLSGVIHPYPTQSEAIKQAGDAYQRTRLTPFVKNLLSRWMEWTR

Samples

Sample ID Description Type Environment
1 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
2 2617270889 Nostoc punctiforme PCC 73102 Isolate Unclassified
3 2831426010 Nostoc sp. 106C Isolate Unclassified
4 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
5 2849660919 Nostoc sp. T09 Isolate Unclassified
6 2884411467 Dyella sp. AD56 Isolate Rhizosphere
7 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
8 2894772417 Roseomonas oryzicola KCTC 22478 Isolate Rhizosphere
9 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
10 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
11 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
12 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
13 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
14 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
15 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
16 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
17 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
18 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
19 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
20 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
21 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
22 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
23 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
26 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
27 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
28 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
36 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
52 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
76 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
78 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
79 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
80 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
83 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
84 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
85 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
86 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
87 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
88 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
89 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
90 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
91 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
92 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
93 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
94 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
95 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
96 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
97 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
98 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
99 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
100 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
101 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
102 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
103 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
104 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
105 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
106 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
107 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
108 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
109 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
110 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
111 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
112 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
113 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
114 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 91.56
Metatranscriptomes 0
Isolates 8.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.25
Nodule 0
Rhizoplane 0
Rhizosphere 89.61
Stem 0
Stem Tuber 0
Unclassified 7.14

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1001991 3300001915 Bacteria 5492
2 JGI24741J21665_1002650 3300001915 Bacteria 4566
3 JGI24737J22298_10000065 3300001990 Bacteria 31150
4 rootH1_10081726 3300003316 Bacteria 2534
5 Ga0065707_10086896 3300005295 Bacteria 5254
6 Ga0070666_10039545 3300005335 Bacteria 3144
7 Ga0070682_100013413 3300005337 Bacteria 4713
8 Ga0070660_100032261 3300005339 Bacteria 3940
9 Ga0070661_100049105 3300005344 Bacteria 3089
10 Ga0070669_100038129 3300005353 Bacteria 3488
11 Ga0070659_100005005 3300005366 Bacteria 9495
12 Ga0070667_100120216 3300005367 Bacteria 2285
13 Ga0070708_100022352 3300005445 Bacteria 5364
14 Ga0070681_10076622 3300005458 Bacteria 3302
15 Ga0070698_100084479 3300005471 Unclassified 3163
16 Ga0070698_100086745 3300005471 Bacteria 3116
17 Ga0070699_100000025 3300005518 Bacteria 158245
18 Ga0070697_100013895 3300005536 Bacteria 6319
19 Ga0070697_100127081 3300005536 Bacteria 2136
20 Ga0068853_100013659 3300005539 Bacteria 6635
21 Ga0068855_100000002 3300005563 Bacteria 616881
22 Ga0068856_100025070 3300005614 Bacteria 5811
23 Ga0068860_100062025 3300005843 Bacteria 3552
24 Ga0068862_100066447 3300005844 Bacteria 3108
25 Ga0068862_100158933 3300005844 Bacteria 2016
26 Ga0081455_10000246 3300005937 Bacteria 70584
27 Ga0070717_10051192 3300006028 Bacteria 3398
28 Ga0075364_10055814 3300006051 Bacteria 2585
29 Ga0070716_100049390 3300006173 Bacteria 2383
30 Ga0075367_10043855 3300006178 Bacteria 2620
31 Ga0097621_100026821 3300006237 Bacteria 4524
32 Ga0068871_100006433 3300006358 Bacteria 8310
33 Ga0075428_100012064 3300006844 Bacteria 9613
34 Ga0075428_100022323 3300006844 Bacteria 7007
35 Ga0075428_100045013 3300006844 Bacteria 4849
36 Ga0075428_100248034 3300006844 Bacteria 1919
37 Ga0075430_100000047 3300006846 Bacteria 63972
38 Ga0075430_100005099 3300006846 Bacteria 11054
39 Ga0075430_100006570 3300006846 Bacteria 9808
40 Ga0075431_100000424 3300006847 Bacteria 34431
41 Ga0075431_100078063 3300006847 Bacteria 3418
42 Ga0075433_10014781 3300006852 Bacteria 6389
43 Ga0075433_10040849 3300006852 Bacteria 4017
44 Ga0075433_10254916 3300006852 Unclassified 1556
45 Ga0075434_100038844 3300006871 Unclassified 4717
46 Ga0075429_100001517 3300006880 Bacteria 19114
47 Ga0075429_100008965 3300006880 Bacteria 8689
48 Ga0075436_100017291 3300006914 Bacteria 4936
49 Ga0111539_10023631 3300009094 Bacteria 7554
50 Ga0111539_10038279 3300009094 Bacteria 5785
51 Ga0114129_10003745 3300009147 Bacteria 21438
52 Ga0114129_10006918 3300009147 Bacteria 16137
53 Ga0114129_10009746 3300009147 Bacteria 13700
54 Ga0114129_10011616 3300009147 Bacteria 12538
55 Ga0105241_10058036 3300009174 Bacteria 2971
56 Ga0105241_10110558 3300009174 Bacteria 2199
57 Ga0105238_10041071 3300009551 Bacteria 4686
58 Ga0157373_10034749 3300013100 Bacteria 3621
59 Ga0157369_10000100 3300013105 Bacteria 118782
60 Ga0157369_10029133 3300013105 Bacteria 6103
61 Ga0163162_10002578 3300013306 Bacteria 17157
62 Ga0157372_10026454 3300013307 Bacteria 6313
63 Ga0163163_10173562 3300014325 Bacteria 2202
64 Ga0157379_10112158 3300014968 Bacteria 2450
65 Ga0207647_10005864 3300025904 Bacteria 8954
66 Ga0207699_10115299 3300025906 Bacteria 1728
67 Ga0207705_10046196 3300025909 Bacteria 3129
68 Ga0207684_10135105 3300025910 Bacteria 2117
69 Ga0207654_10018761 3300025911 Bacteria 3636
70 Ga0207707_10000911 3300025912 Bacteria 28830
71 Ga0207695_10000689 3300025913 Bacteria 66235
72 Ga0207671_10017814 3300025914 Bacteria 5465
73 Ga0207693_10020274 3300025915 Bacteria 5289
74 Ga0207693_10107544 3300025915 Bacteria 2188
75 Ga0207660_10013069 3300025917 Bacteria 5436
76 Ga0207657_10088794 3300025919 Bacteria 2583
77 Ga0207652_10000810 3300025921 Bacteria 29837
78 Ga0207690_10002977 3300025932 Bacteria 10197
79 Ga0207665_10017952 3300025939 Bacteria 4651
80 Ga0207665_10125604 3300025939 Bacteria 1816
81 Ga0207661_10106507 3300025944 Bacteria 2363
82 Ga0207667_10000005 3300025949 Bacteria 715503
83 Ga0207667_10036432 3300025949 Bacteria 5273
84 Ga0207668_10032645 3300025972 Bacteria 3443
85 Ga0207702_10004498 3300026078 Bacteria 12376
86 Ga0207702_10054231 3300026078 Bacteria 3396
87 Ga0207428_10094054 3300027907 Bacteria 2324
88 Ga0268264_10051279 3300028381 Bacteria 3438
89 Ga0316183_1169378 3300030742 Bacteria 7390
90 Ga0316182_1000534 3300030745 Bacteria 12578
91 Ga0316579_10031900 3300031691 Bacteria 2414
92 Ga0265314_10039278 3300031711 Bacteria 3411
93 Ga0307414_10034698 3300032004 Bacteria 3349
94 Ga0373923_0000931 3300035111 Bacteria 7833
95 Ga0373946_0038821 3300035171 Bacteria 1941
96 Ga0373937_0010425 3300036401 Bacteria 8116
97 Ga0373937_0032848 3300036401 Bacteria 4708
98 Ga0316582_0045509 3300036647 Bacteria 2763
99 Ga0436360_0430179 3300039438 Bacteria 2448
100 Ga0436360_0692021 3300039438 Bacteria 2193
101 Ga0436361_0552439 3300039447 Bacteria 2227
102 Ga0436361_0772766 3300039447 Bacteria 1662
103 Ga0436362_0395962 3300039453 Bacteria 4101
104 Ga0439439_0016735 3300041406 Bacteria 1798
105 Ga0451577_0007124 3300042876 Bacteria 11028
106 Ga0453683_0018209 3300044673 Bacteria 4511
107 Ga0453684_0000205 3300044712 Bacteria 257921
108 Ga0453684_0000208 3300044712 Bacteria 255911
109 Ga0451576_0000654 3300045051 Bacteria 71548
110 Ga0501033_0025567 3300049570 Bacteria 4448
111 Ga0501037_0082435 3300049573 Bacteria 2330
112 Ga0501072_0002085 3300049588 Bacteria 14890
113 Ga0501072_0112209 3300049588 Bacteria 2170
114 Ga0501076_0003992 3300049592 Bacteria 10423
115 Ga0501076_0008046 3300049592 Bacteria 7705
116 Ga0501079_0246712 3300049741 Bacteria 1395
117 Ga0501080_0209567 3300049742 Bacteria 1786
118 Ga0501081_0080546 3300049743 Bacteria 2279
119 Ga0501045_0012669 3300049824 Bacteria 5937
120 nmdc:mga00v17_37081_c1 3300050491 Bacteria 2908
121 nmdc:mga05p37_1553_c1 3300050507 Bacteria 13903
122 nmdc:mga05p37_9756_c1 3300050507 Bacteria 11388
123 nmdc:mga09592_1112_c1 3300050508 Bacteria 21395
124 nmdc:mga09592_15952_c1 3300050508 Bacteria 6138
125 nmdc:mga0qj67_1315_c1 3300050509 Bacteria 17441
126 nmdc:mga0qj67_15473_c1 3300050509 Bacteria 5776
127 nmdc:mga06r32_12297_c1 3300050510 Bacteria 7719
128 nmdc:mga06r32_143111_c1 3300050510 Bacteria 2368
129 nmdc:mga06r32_2394_c1 3300050510 Bacteria 16783
130 nmdc:mga08y16_218824_c1 3300050511 Bacteria 1972
131 nmdc:mga0n895_63524_c1 3300050512 Unclassified 3651
132 nmdc:mga0n895_65555_c1 3300050512 Bacteria 3595
133 nmdc:mga08x19_11319_c1 3300050514 Bacteria 5369
134 nmdc:mga08x19_39656_c1 3300050514 Bacteria 2994
135 nmdc:mga0a205_12465_c1 3300050515 Bacteria 7867
136 nmdc:mga0a205_145266_c1 3300050515 Bacteria 2272
137 nmdc:mga0a205_26917_c1 3300050515 Unclassified 2651
138 nmdc:mga0a205_48296_c1 3300050515 Bacteria 4108
139 Ga0500651_0000690 3300053093 Bacteria 16757
140 Ga0500556_0005480 3300053104 Bacteria 3584
141 Ga0501082_0021038 3300060353 Bacteria 5627

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005563 Ga0068855_100000002 Ga0068855_100000002477 418
2 3300025949 Ga0207667_10000005 Ga0207667_10000005587 418
3 3300049741 Ga0501079_0246712 Ga0501079_0246712_50_1372 427
4 3300031711 Ga0265314_10039278 Ga0265314_100392782 433
5 3300026078 Ga0207702_10054231 Ga0207702_100542311 436
6 3300005536 Ga0070697_100013895 Ga0070697_1000138952 438
7 3300005445 Ga0070708_100022352 Ga0070708_1000223527 443
8 3300049592 Ga0501076_0003992 Ga0501076_0003992_1630_3036 445
9 3300049743 Ga0501081_0080546 Ga0501081_0080546_583_1989 445
10 3300049824 Ga0501045_0012669 Ga0501045_0012669_2522_3928 445
11 3300060353 Ga0501082_0021038 Ga0501082_0021038_1262_2668 445
12 3300042876 Ga0451577_0007124 Ga0451577_0007124_4618_6060 446
13 3300044712 Ga0453684_0000208 Ga0453684_0000208_216375_217817 446
14 3300045051 Ga0451576_0000654 Ga0451576_0000654_31278_32720 446
15 3300005844 Ga0068862_100066447 Ga0068862_1000664472 449
16 iso_pu_bacteria 2894772417 2894777271 452
17 3300006178 Ga0075367_10043855 Ga0075367_100438552 453
18 3300006852 Ga0075433_10254916 Ga0075433_102549161 453
19 3300009147 Ga0114129_10006918 Ga0114129_100069184 453
20 3300050515 nmdc:mga0a205_26917_c1 nmdc:mga0a205_26917_c1_1183_2607 453
21 3300006844 Ga0075428_100012064 Ga0075428_1000120649 454
22 3300006846 Ga0075430_100006570 Ga0075430_1000065701 454
23 3300006852 Ga0075433_10014781 Ga0075433_100147814 454
24 3300009094 Ga0111539_10023631 Ga0111539_100236313 454
25 3300032004 Ga0307414_10034698 Ga0307414_100346982 454
26 3300050512 nmdc:mga0n895_65555_c1 nmdc:mga0n895_65555_c1_676_2169 454
27 3300050515 nmdc:mga0a205_12465_c1 nmdc:mga0a205_12465_c1_2208_3701 454
28 3300005471 Ga0070698_100084479 Ga0070698_1000844792 455
29 3300006914 Ga0075436_100017291 Ga0075436_1000172914 455
30 3300009147 Ga0114129_10011616 Ga0114129_100116164 455
31 3300050514 nmdc:mga08x19_11319_c1 nmdc:mga08x19_11319_c1_65_1495 455
32 3300050514 nmdc:mga08x19_39656_c1 nmdc:mga08x19_39656_c1_1421_2851 455
33 3300003316 rootH1_10081726 rootH1_100817262 456
34 3300006847 Ga0075431_100078063 Ga0075431_1000780633 456
35 3300050510 nmdc:mga06r32_143111_c1 nmdc:mga06r32_143111_c1_939_2357 456
36 3300001990 JGI24737J22298_10000065 JGI24737J22298_100000656 457
37 3300030742 Ga0316183_1169378 Ga0316183_11693783 457
38 3300030745 Ga0316182_1000534 Ga0316182_100053417 457
39 3300031691 Ga0316579_10031900 Ga0316579_100319002 457
40 3300036647 Ga0316582_0045509 Ga0316582_0045509_382_1797 457
41 3300006173 Ga0070716_100049390 Ga0070716_1000493902 459
42 3300025915 Ga0207693_10020274 Ga0207693_100202745 459
43 3300025939 Ga0207665_10017952 Ga0207665_100179523 459
44 3300006844 Ga0075428_100022323 Ga0075428_1000223234 461
45 3300006880 Ga0075429_100001517 Ga0075429_10000151711 461
46 3300006051 Ga0075364_10055814 Ga0075364_100558142 466
47 3300050491 nmdc:mga00v17_37081_c1 nmdc:mga00v17_37081_c1_731_2185 466
48 3300050507 nmdc:mga05p37_9756_c1 nmdc:mga05p37_9756_c1_6946_8418 466
49 3300050515 nmdc:mga0a205_145266_c1 nmdc:mga0a205_145266_c1_70_1521 468
50 3300006871 Ga0075434_100038844 Ga0075434_1000388444 469
51 3300039438 Ga0436360_0692021 Ga0436360_0692021_669_2108 469
52 3300039447 Ga0436361_0552439 Ga0436361_0552439_760_2199 469
53 3300039453 Ga0436362_0395962 Ga0436362_0395962_2141_3580 469
54 3300050512 nmdc:mga0n895_63524_c1 nmdc:mga0n895_63524_c1_1581_3038 469
55 3300006846 Ga0075430_100005099 Ga0075430_1000050998 470
56 3300050509 nmdc:mga0qj67_15473_c1 nmdc:mga0qj67_15473_c1_80_1537 470
57 3300025906 Ga0207699_10115299 Ga0207699_101152991 471
58 3300025915 Ga0207693_10107544 Ga0207693_101075441 471
59 3300009147 Ga0114129_10003745 Ga0114129_100037452 473
60 iso_pu_bacteria 2849660919 2849665965 473
61 3300025910 Ga0207684_10135105 Ga0207684_101351052 474
62 3300041406 Ga0439439_0016735 Ga0439439_0016735_195_1661 474
63 3300050511 nmdc:mga08y16_218824_c1 nmdc:mga08y16_218824_c1_162_1616 474
64 3300050507 nmdc:mga05p37_1553_c1 nmdc:mga05p37_1553_c1_5559_7058 477
65 3300050508 nmdc:mga09592_1112_c1 nmdc:mga09592_1112_c1_10032_11531 477
66 3300039447 Ga0436361_0772766 Ga0436361_0772766_86_1525 479
67 iso_pu_bacteria 2515154155 2515856172 479
68 3300006844 Ga0075428_100248034 Ga0075428_1002480342 480
69 3300006846 Ga0075430_100000047 Ga0075430_10000004733 480
70 3300006847 Ga0075431_100000424 Ga0075431_10000042423 480
71 3300006880 Ga0075429_100008965 Ga0075429_1000089659 480
72 3300009094 Ga0111539_10038279 Ga0111539_100382792 480
73 3300009147 Ga0114129_10009746 Ga0114129_1000974611 480
74 3300025939 Ga0207665_10125604 Ga0207665_101256041 480
75 3300027907 Ga0207428_10094054 Ga0207428_100940542 480
76 3300050508 nmdc:mga09592_15952_c1 nmdc:mga09592_15952_c1_320_1792 480
77 3300050509 nmdc:mga0qj67_1315_c1 nmdc:mga0qj67_1315_c1_15424_16938 480
78 3300050510 nmdc:mga06r32_12297_c1 nmdc:mga06r32_12297_c1_5173_6645 480
79 3300050510 nmdc:mga06r32_2394_c1 nmdc:mga06r32_2394_c1_14893_16407 480
80 3300025972 Ga0207668_10032645 Ga0207668_100326452 481
81 3300006844 Ga0075428_100045013 Ga0075428_1000450135 482
82 3300049588 Ga0501072_0002085 Ga0501072_0002085_13279_14793 482
83 3300049592 Ga0501076_0008046 Ga0501076_0008046_87_1601 482
84 3300014325 Ga0163163_10173562 Ga0163163_101735621 484
85 iso_pu_bacteria 2913912277 2913915845 484
86 3300005337 Ga0070682_100013413 Ga0070682_1000134133 486
87 3300005339 Ga0070660_100032261 Ga0070660_1000322612 486
88 3300005366 Ga0070659_100005005 Ga0070659_1000050053 486
89 3300005937 Ga0081455_10000246 Ga0081455_100002465 486
90 3300025932 Ga0207690_10002977 Ga0207690_100029776 486
91 3300005471 Ga0070698_100086745 Ga0070698_1000867452 487
92 3300005536 Ga0070697_100127081 Ga0070697_1001270812 487
93 3300006028 Ga0070717_10051192 Ga0070717_100511922 487
94 3300035111 Ga0373923_0000931 Ga0373923_0000931_1806_3356 487
95 3300035171 Ga0373946_0038821 Ga0373946_0038821_270_1820 487
96 3300036401 Ga0373937_0032848 Ga0373937_0032848_2528_4078 487
97 3300039438 Ga0436360_0430179 Ga0436360_0430179_510_1976 487
98 3300005353 Ga0070669_100038129 Ga0070669_1000381292 488
99 3300053104 Ga0500556_0005480 Ga0500556_0005480_1232_2734 488
100 3300044712 Ga0453684_0000205 Ga0453684_0000205_236892_238400 490
101 3300049588 Ga0501072_0112209 Ga0501072_0112209_44_1558 491
102 3300005295 Ga0065707_10086896 Ga0065707_100868963 493
103 3300014968 Ga0157379_10112158 Ga0157379_101121582 493
104 iso_pu_bacteria 2617270889 2617913939 493
105 iso_pu_bacteria 2831426010 2831433444 493
106 iso_pu_bacteria 2848694841 2848701256 493
107 iso_pu_bacteria 2849660919 2849665269 493
108 iso_pu_bacteria 2884411467 2884414162 493
109 iso_pu_bacteria 2886627955 2886629783 493
110 iso_pu_bacteria 2913844669 2913847103 493
111 iso_pu_bacteria 2913939268 2913941301 493
112 iso_pu_bacteria 642555144 642602467 493
113 3300006852 Ga0075433_10040849 Ga0075433_100408494 494
114 3300050515 nmdc:mga0a205_48296_c1 nmdc:mga0a205_48296_c1_1805_3367 494
115 3300005518 Ga0070699_100000025 Ga0070699_10000002591 495
116 3300044673 Ga0453683_0018209 Ga0453683_0018209_711_2276 495
117 3300001915 JGI24741J21665_1001991 JGI24741J21665_10019912 496
118 3300001915 JGI24741J21665_1002650 JGI24741J21665_10026502 496
119 3300005335 Ga0070666_10039545 Ga0070666_100395451 496
120 3300005344 Ga0070661_100049105 Ga0070661_1000491052 496
121 3300005367 Ga0070667_100120216 Ga0070667_1001202162 496
122 3300005458 Ga0070681_10076622 Ga0070681_100766222 496
123 3300005539 Ga0068853_100013659 Ga0068853_1000136592 496
124 3300005614 Ga0068856_100025070 Ga0068856_1000250703 496
125 3300005843 Ga0068860_100062025 Ga0068860_1000620252 496
126 3300005844 Ga0068862_100158933 Ga0068862_1001589332 496
127 3300006237 Ga0097621_100026821 Ga0097621_1000268212 496
128 3300006358 Ga0068871_100006433 Ga0068871_10000643310 496
129 3300009174 Ga0105241_10058036 Ga0105241_100580363 496
130 3300009174 Ga0105241_10110558 Ga0105241_101105582 496
131 3300009551 Ga0105238_10041071 Ga0105238_100410712 496
132 3300013100 Ga0157373_10034749 Ga0157373_100347492 496
133 3300013105 Ga0157369_10000100 Ga0157369_100001006 496
134 3300013105 Ga0157369_10029133 Ga0157369_100291335 496
135 3300013306 Ga0163162_10002578 Ga0163162_100025782 496
136 3300013307 Ga0157372_10026454 Ga0157372_100264544 496
137 3300025904 Ga0207647_10005864 Ga0207647_100058643 496
138 3300025909 Ga0207705_10046196 Ga0207705_100461962 496
139 3300025911 Ga0207654_10018761 Ga0207654_100187612 496
140 3300025912 Ga0207707_10000911 Ga0207707_1000091122 496
141 3300025913 Ga0207695_10000689 Ga0207695_1000068944 496
142 3300025914 Ga0207671_10017814 Ga0207671_100178142 496
143 3300025917 Ga0207660_10013069 Ga0207660_100130694 496
144 3300025919 Ga0207657_10088794 Ga0207657_100887942 496
145 3300025921 Ga0207652_10000810 Ga0207652_100008103 496
146 3300025944 Ga0207661_10106507 Ga0207661_101065072 496
147 3300025949 Ga0207667_10036432 Ga0207667_100364322 496
148 3300026078 Ga0207702_10004498 Ga0207702_100044987 496
149 3300028381 Ga0268264_10051279 Ga0268264_100512793 496
150 3300036401 Ga0373937_0010425 Ga0373937_0010425_2150_3673 496
151 3300049570 Ga0501033_0025567 Ga0501033_0025567_1851_3374 496
152 3300049573 Ga0501037_0082435 Ga0501037_0082435_377_1900 496
153 3300049742 Ga0501080_0209567 Ga0501080_0209567_20_1543 496
154 3300053093 Ga0500651_0000690 Ga0500651_0000690_2636_4159 496

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02852

Pyr_redox_dim

Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

394

503

0.99

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

223

303

0.95

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

56

376

0.89

PF01134

GIDA

Glucose inhibited division protein A

57

123

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
1ebd-assembly1.cif.gz_B dihydrolipoamide dehydrogenase complexed with the binding domain of the dihydrolipoamide acetylase 0.954 35 482
5x1y-assembly3.cif.gz_F structure of mercuric reductase from lysinibacillus sphaericus 0.9466 36 480
4ywo-assembly1.cif.gz_A-2 mercuric reductase from metallosphaera sedula 0.9462 28 481
4jq9-assembly1.cif.gz_A dihydrolipoyl dehydrogenase of escherichia coli pyruvate dehydrogenase complex 0.9446 36 480
2eq8-assembly1.cif.gz_A crystal structure of lipoamide dehydrogenase from thermus thermophilus hb8 with psbdp 0.938 36 480
ID Description Score Start End Superfamily
af_A0A1D6LYX0_29_117_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9793 192 258 3.50.50.60
af_A0A1D6HP35_184_301_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9583 184 302 3.50.50.60
1ebdB02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9569 184 293 3.50.50.60
2eq6B02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9569 195 293 3.50.50.60
4k8dA03 Alpha Beta;2-Layer Sandwich;Enolase-like; domain 1;FAD/NAD-linked reductase, C-terminal dimerisation domain 0.9562 370 481 3.30.390.30
ID Description Score Start End GO Terms
AF-A0A660QGN2-F1-model_v4 FAD-containing oxidoreductase 0.9848 124 486 GO:0003955
GO:0050660
AF-A0A7S1TF56-F1-model_v4 DEP domain-containing protein 0.9845 11 486 GO:0003955
GO:0016668
GO:0035556
GO:0050660
AF-A0A2W4WF93-F1-model_v4 FAD-containing oxidoreductase 0.9843 57 485 GO:0003955
GO:0016668
GO:0050660
AF-A0A838IHR2-F1-model_v4 FAD-containing oxidoreductase 0.9841 11 486 GO:0003955
GO:0016020
GO:0016668
GO:0050660
AF-B7ZGN8-F1-model_v4 Mercuric reductase A 0.981 112 486 GO:0003955
GO:0050660

Feature Viewer

pLDDT pTM Quality
92.56 0.9 High
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Predicted Structure (AlphaFold2)

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