F173442

General Info

Members Datasets Scaffolds Average Seq Length
138 107 276 149

Family's Representative Sequence

Representative Sequence 3300028666|Ga0265336_10016550|Ga0265336_100165503
Length 168
Sequence MAEPSGDGPSARSGEDSPRVRFTTTLLRAGKTATGIEVPAEVVARLGPTKRPPVRVTINGHTYRSTVAVMGGVFMVGVSAENRTSAGVAGGDEVEVELELDTTPREVTVPADLAEALGRDPAAKQRFDALSYSHKRAHVEAIEAAKAAETRQRRIAKAISMLRADPPR

Samples

Sample ID Description Type Environment
1 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
2 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
3 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
4 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
7 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
8 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
9 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
10 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
18 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
19 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
22 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
26 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
27 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
28 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
29 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
30 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
31 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
32 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
33 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
34 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
37 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
38 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
39 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
40 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
41 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
42 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
43 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
54 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
55 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
56 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
57 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
58 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
61 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
62 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
63 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
64 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
65 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
66 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
67 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
68 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
69 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
70 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
71 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
72 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
73 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
74 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
75 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
76 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
77 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
78 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
79 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
80 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
81 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
82 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
83 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
84 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
85 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
86 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
87 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
88 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
89 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
90 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
91 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
92 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
93 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
94 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
95 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
96 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
97 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
98 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
99 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
100 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
101 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
102 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
103 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
104 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
105 2857729791 Plantibacter sp. R-72288 Isolate Unclassified
106 2888578766 Paenibacillus lycopersici 12200R-189 Isolate Rhizosphere
107 2928121344 Plantibacter flavus 1756 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.1
Metatranscriptomes 0
Isolates 2.9

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.67
Nodule 0
Rhizoplane 3.62
Rhizosphere 73.91
Stem 0
Stem Tuber 0
Unclassified 15.22

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0265336_10016550 3300028666 Bacteria 2411
2 Ga0065707_10217416 3300005295 Bacteria 1239
3 Ga0070690_100072970 3300005330 Bacteria 2232
4 Ga0070689_100847072 3300005340 Bacteria 806
5 Ga0070692_10154738 3300005345 Bacteria 1309
6 Ga0070671_100709041 3300005355 Bacteria 873
7 Ga0070701_10960104 3300005438 Bacteria 594
8 Ga0070705_100004788 3300005440 Bacteria 6588
9 Ga0070705_100440393 3300005440 Bacteria 975
10 Ga0070700_100374273 3300005441 Unclassified 1063
11 Ga0070708_100240774 3300005445 Bacteria 1698
12 Ga0070708_100256283 3300005445 Bacteria 1644
13 Ga0070706_100107279 3300005467 Bacteria 2598
14 Ga0070707_100006409 3300005468 Bacteria 10939
15 Ga0070707_100039571 3300005468 Bacteria 4507
16 Ga0070707_100058713 3300005468 Unclassified 3689
17 Ga0070707_100083807 3300005468 Bacteria 3081
18 Ga0070707_100225987 3300005468 Bacteria 1823
19 Ga0070707_100468561 3300005468 Bacteria 1221
20 Ga0070698_100017416 3300005471 Bacteria 7573
21 Ga0070698_100195364 3300005471 Bacteria 1960
22 Ga0070698_100256587 3300005471 Bacteria 1681
23 Ga0070699_100015473 3300005518 Bacteria 6556
24 Ga0070699_100361484 3300005518 Bacteria 1309
25 Ga0070697_100496072 3300005536 Bacteria 1067
26 Ga0070697_100941405 3300005536 Unclassified 767
27 Ga0070696_100031064 3300005546 Unclassified 3659
28 Ga0070696_100109564 3300005546 Unclassified 1987
29 Ga0070696_100235816 3300005546 Bacteria 1378
30 Ga0070693_100177081 3300005547 Bacteria 1370
31 Ga0070704_100030906 3300005549 Bacteria 3595
32 Ga0070704_100293967 3300005549 Unclassified 1351
33 Ga0068854_100345925 3300005578 Bacteria 1215
34 Ga0068856_101126644 3300005614 Bacteria 802
35 Ga0070702_101412054 3300005615 Unclassified 569
36 Ga0068852_100999653 3300005616 Bacteria 855
37 Ga0068859_100221732 3300005617 Bacteria 1979
38 Ga0068862_100370449 3300005844 Bacteria 1333
39 Ga0075365_10017997 3300006038 Bacteria 4336
40 Ga0075365_10416465 3300006038 Bacteria 948
41 Ga0075363_100004296 3300006048 Bacteria 6201
42 Ga0075364_10003577 3300006051 Bacteria 8849
43 Ga0075364_10004571 3300006051 Bacteria 7966
44 Ga0070712_100478257 3300006175 Bacteria 1041
45 Ga0075362_10007267 3300006177 Bacteria 4185
46 Ga0075362_10022814 3300006177 Bacteria 2641
47 Ga0075367_10047710 3300006178 Bacteria 2520
48 Ga0075367_10467260 3300006178 Bacteria 800
49 Ga0075367_10638513 3300006178 Bacteria 677
50 Ga0068865_100115319 3300006881 Bacteria 1988
51 Ga0097620_100221720 3300006931 Bacteria 1979
52 Ga0111539_10483221 3300009094 Bacteria 1442
53 Ga0111539_10613132 3300009094 Bacteria 1267
54 Ga0111539_11372887 3300009094 Unclassified 820
55 Ga0105247_10258727 3300009101 Bacteria 1193
56 Ga0105248_10144854 3300009177 Bacteria 2681
57 Ga0105248_11853850 3300009177 Unclassified 684
58 Ga0099796_10044344 3300010159 Bacteria 1519
59 Ga0105239_10658201 3300010375 Bacteria 1196
60 Ga0105246_10550289 3300011119 Bacteria 989
61 Ga0157369_10116884 3300013105 Bacteria 2831
62 Ga0163162_10473003 3300013306 Bacteria 1385
63 Ga0157376_10947537 3300014969 Bacteria 881
64 Ga0213875_10000519 3300021388 Bacteria 32028
65 Ga0207684_10074081 3300025910 Bacteria 2892
66 Ga0207684_11332955 3300025910 Unclassified 590
67 Ga0207662_10093590 3300025918 Bacteria 1852
68 Ga0207646_10009790 3300025922 Bacteria 9441
69 Ga0207646_10253638 3300025922 Bacteria 1590
70 Ga0207704_10112808 3300025938 Bacteria 1842
71 Ga0207704_10919743 3300025938 Bacteria 736
72 Ga0207711_10220734 3300025941 Bacteria 1734
73 Ga0207661_11679395 3300025944 Unclassified 580
74 Ga0207712_11675044 3300025961 Unclassified 570
75 Ga0207640_10062375 3300025981 Bacteria 2473
76 Ga0207708_10052537 3300026075 Bacteria 3104
77 Ga0207683_10121887 3300026121 Bacteria 2341
78 Ga0209813_10030467 3300027866 Unclassified 1585
79 Ga0265319_1122079 3300028563 Bacteria 811
80 Ga0265338_10002851 3300028800 Bacteria 25265
81 Ga0265325_10029559 3300031241 Bacteria 2945
82 Ga0307513_10125071 3300031456 Bacteria 2529
83 Ga0307410_10130005 3300031852 Bacteria 1849
84 Ga0307409_100490878 3300031995 Bacteria 1194
85 Ga0307414_12084356 3300032004 Bacteria 530
86 Ga0307415_100110441 3300032126 Bacteria 2039
87 Ga0373956_0188866 3300035119 Unclassified 975
88 Ga0373931_0966085 3300035691 Bacteria 575
89 Ga0373933_0336344 3300035724 Bacteria 980
90 Ga0436364_1531377 3300037853 Bacteria 65823
91 Ga0451802_0231537 3300041460 Bacteria 600
92 Ga0451839_0983894 3300041496 Bacteria 685
93 Ga0439441_003714 3300042001 Bacteria 2271
94 Ga0450923_027846 3300042125 Bacteria 1138
95 Ga0450910_005277 3300042147 Bacteria 1760
96 Ga0450908_037124 3300042184 Bacteria 845
97 Ga0439435_0103592 3300042436 Unclassified 877
98 Ga0451577_0002725 3300042876 Bacteria 20541
99 Ga0466963_0479848 3300044694 Bacteria 878
100 Ga0453684_0000012 3300044712 Bacteria 1062512
101 Ga0466960_0222942 3300044901 Bacteria 1038
102 Ga0466959_1139482 3300045049 Bacteria 518
103 Ga0495653_0309368 3300046463 Bacteria 1028
104 Ga0495607_0087024 3300046501 Bacteria 1702
105 Ga0495618_0192744 3300046514 Bacteria 1292
106 Ga0495640_0415142 3300046533 Bacteria 825
107 Ga0495611_0082290 3300046648 Bacteria 1482
108 Ga0495635_0710166 3300046663 Bacteria 651
109 Ga0495646_0427298 3300046680 Bacteria 686
110 Ga0495658_0270673 3300046683 Bacteria 1071
111 Ga0495613_0136852 3300046689 Unclassified 1752
112 Ga0495684_0939090 3300047471 Bacteria 554
113 Ga0496101_0214581 3300048904 Bacteria 1492
114 Ga0496102_1488055 3300048905 Unclassified 596
115 Ga0496102_1797820 3300048905 Bacteria 530
116 Ga0496109_0822515 3300048912 Unclassified 867
117 Ga0496117_0115042 3300048920 Bacteria 1666
118 Ga0496118_0169701 3300048921 Bacteria 1335
119 Ga0496123_0113709 3300048926 Bacteria 1541
120 Ga0501067_0280213 3300049583 Unclassified 928
121 nmdc:mga03683_19095_c1 3300050489 Bacteria 2613
122 nmdc:mga03683_4137_c1 3300050489 Bacteria 4771
123 nmdc:mga00v17_1774_c1 3300050491 Bacteria 11195
124 nmdc:mga00v17_40858_c1 3300050491 Bacteria 2784
125 nmdc:mga0yw44_168529_c1 3300050492 Bacteria 1437
126 nmdc:mga0yw44_27944_c1 3300050492 Bacteria 3239
127 nmdc:mga0yw44_4718_c1 3300050492 Bacteria 6308
128 nmdc:mga06z11_281916_c1 3300050494 Bacteria 984
129 nmdc:mga06z11_48773_c2 3300050494 Bacteria 1591
130 nmdc:mga04h51_107467_c1 3300050495 Bacteria 1024
131 nmdc:mga0qj67_590897_c1 3300050509 Bacteria 888
132 nmdc:mga08y16_886291_c1 3300050511 Bacteria 879
133 nmdc:mga0sz30_174610_c1 3300050516 Unclassified 953
134 Ga0500573_0423590 3300053140 Unclassified 623
135 2795781694 2795385470 Bacteria 8317180
136 2857733187 2857729791 Bacteria 4040535
137 2888579296 2888578766 Bacteria 6743310
138 2928121891 2928121344 Bacteria 3972376
139 Ga0265336_10016550
140 Ga0065707_10217416
141 Ga0070690_100072970
142 Ga0070689_100847072
143 Ga0070692_10154738
144 Ga0070671_100709041
145 Ga0070701_10960104
146 Ga0070705_100004788
147 Ga0070705_100440393
148 Ga0070700_100374273
149 Ga0070708_100240774
150 Ga0070708_100256283
151 Ga0070706_100107279
152 Ga0070707_100006409
153 Ga0070707_100039571
154 Ga0070707_100058713
155 Ga0070707_100083807
156 Ga0070707_100225987
157 Ga0070707_100468561
158 Ga0070698_100017416
159 Ga0070698_100195364
160 Ga0070698_100256587
161 Ga0070699_100015473
162 Ga0070699_100361484
163 Ga0070697_100496072
164 Ga0070697_100941405
165 Ga0070696_100031064
166 Ga0070696_100109564
167 Ga0070696_100235816
168 Ga0070693_100177081
169 Ga0070704_100030906
170 Ga0070704_100293967
171 Ga0068854_100345925
172 Ga0068856_101126644
173 Ga0070702_101412054
174 Ga0068852_100999653
175 Ga0068859_100221732
176 Ga0068862_100370449
177 Ga0075365_10017997
178 Ga0075365_10416465
179 Ga0075363_100004296
180 Ga0075364_10003577
181 Ga0075364_10004571
182 Ga0070712_100478257
183 Ga0075362_10007267
184 Ga0075362_10022814
185 Ga0075367_10047710
186 Ga0075367_10467260
187 Ga0075367_10638513
188 Ga0068865_100115319
189 Ga0097620_100221720
190 Ga0111539_10483221
191 Ga0111539_10613132
192 Ga0111539_11372887
193 Ga0105247_10258727
194 Ga0105248_10144854
195 Ga0105248_11853850
196 Ga0099796_10044344
197 Ga0105239_10658201
198 Ga0105246_10550289
199 Ga0157369_10116884
200 Ga0163162_10473003
201 Ga0157376_10947537
202 Ga0213875_10000519
203 Ga0207684_10074081
204 Ga0207684_11332955
205 Ga0207662_10093590
206 Ga0207646_10009790
207 Ga0207646_10253638
208 Ga0207704_10112808
209 Ga0207704_10919743
210 Ga0207711_10220734
211 Ga0207661_11679395
212 Ga0207712_11675044
213 Ga0207640_10062375
214 Ga0207708_10052537
215 Ga0207683_10121887
216 Ga0209813_10030467
217 Ga0265319_1122079
218 Ga0265338_10002851
219 Ga0265325_10029559
220 Ga0307513_10125071
221 Ga0307410_10130005
222 Ga0307409_100490878
223 Ga0307414_12084356
224 Ga0307415_100110441
225 Ga0373956_0188866
226 Ga0373931_0966085
227 Ga0373933_0336344
228 Ga0436364_1531377
229 Ga0451802_0231537
230 Ga0451839_0983894
231 Ga0439441_003714
232 Ga0450923_027846
233 Ga0450910_005277
234 Ga0450908_037124
235 Ga0439435_0103592
236 Ga0451577_0002725
237 Ga0466963_0479848
238 Ga0453684_0000012
239 Ga0466960_0222942
240 Ga0466959_1139482
241 Ga0495653_0309368
242 Ga0495607_0087024
243 Ga0495618_0192744
244 Ga0495640_0415142
245 Ga0495611_0082290
246 Ga0495635_0710166
247 Ga0495646_0427298
248 Ga0495658_0270673
249 Ga0495613_0136852
250 Ga0495684_0939090
251 Ga0496101_0214581
252 Ga0496102_1488055
253 Ga0496102_1797820
254 Ga0496109_0822515
255 Ga0496117_0115042
256 Ga0496118_0169701
257 Ga0496123_0113709
258 Ga0501067_0280213
259 nmdc:mga03683_19095_c1
260 nmdc:mga03683_4137_c1
261 nmdc:mga00v17_1774_c1
262 nmdc:mga00v17_40858_c1
263 nmdc:mga0yw44_168529_c1
264 nmdc:mga0yw44_27944_c1
265 nmdc:mga0yw44_4718_c1
266 nmdc:mga06z11_281916_c1
267 nmdc:mga06z11_48773_c2
268 nmdc:mga04h51_107467_c1
269 nmdc:mga0qj67_590897_c1
270 nmdc:mga08y16_886291_c1
271 nmdc:mga0sz30_174610_c1
272 Ga0500573_0423590
273 2795781694
274 2857733187
275 2888579296
276 2928121891

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08922

DUF1905

Domain of unknown function (DUF1905)

22

98

0.98

PF13376

OmdA

Bacteriocin-protection, YdeI or OmpD-Associated

106

165

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2d9r-assembly1.cif.gz_A structure of conserved protein of unknown function pg0164 from porphyromonas gingivalis [w83] 0.8787 1 82
2d9r-assembly1.cif.gz_A structure of conserved protein of unknown function pg0164 from porphyromonas gingivalis [w83] 0.8411 1 82
5lmz-assembly1.cif.gz_B fluorinase from streptomyces sp. ma37 0.6476 2 80
5lmz-assembly1.cif.gz_A fluorinase from streptomyces sp. ma37 0.6453 2 80
2zbu-assembly1.cif.gz_A crystal structure of uncharacterized conserved protein from thermotoga maritima 0.6221 2 77
ID Description Score Start End Superfamily
2d9rA00 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;AF2212/PG0164-like 0.8774 1 82 2.40.30.100
2d9rA00 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3;AF2212/PG0164-like 0.8487 1 82 2.40.30.100
af_A0A0R0I043_2_75_2.40.330.10 Mainly Beta;Beta Barrel;At1g16640 B3 domain;DNA-binding pseudobarrel domain 0.7155 16 73 2.40.330.10
af_K7M5I9_285_404_2.40.330.10 Mainly Beta;Beta Barrel;At1g16640 B3 domain;DNA-binding pseudobarrel domain 0.7072 16 76 2.40.330.10
af_F4IQL7_126_220_2.40.330.10 Mainly Beta;Beta Barrel;At1g16640 B3 domain;DNA-binding pseudobarrel domain 0.6872 2 78 2.40.330.10
ID Description Score Start End GO Terms
AF-A0A536ANT6-F1-model_v4 DUF1905 domain-containing protein 0.9916 1 83
AF-A0A536ANT6-F1-model_v4 DUF1905 domain-containing protein 0.9798 1 83
AF-A0A535NTL2-F1-model_v4 DUF1905 domain-containing protein 0.975 1 83
AF-A0A4Q2GAG9-F1-model_v4 deleted 0.9748 88 146
AF-A0A260BCR6-F1-model_v4 Uncharacterized protein 0.954 87 143

Map