F141634

General Info

Members Datasets Scaffolds Average Seq Length
129 111 118 349

Family's Representative Sequence

Representative Sequence 3300009148|Ga0105243_10295458|Ga0105243_102954581
Length 396
Sequence MGFISGAAATILYGRYRRTTIDRTTGGDGQNGESTGAAEQGDGHRRRHGRHPLDREVQAPRRDDEPVAHHGGGPDEGDADIVDGGLRWAEREAGPNATEDKVVKLALDRLAVEFGLRILKVVPGRVSTEVDARLSYNTQASIEKGRYLISQYKAAGIGTDRVLIKIASTWEGIKAAEVLEKEGIHCNLTLLFGMHQAVACAEANVTLISPFVGRILDWYLKAEKRDSYPPTEDPGVKSVTTIYNYYKKFGHKTEVMGASFRNKDEIIELAGSDLLTIAPKLLDQLREGQGTLVRKLDPEKAKGMNIERIKMDEKTFRAMHEKDPMAKEKLDEGIVGFSKAIEALEKLLTERYRAMHNRVVVGEAARAFFKAYDLDGDGHVTREEWAGGLGGAHHLK

Samples

Sample ID Description Type Environment
1 2848694841 Nostoc sp. RF31YmG Isolate Unclassified
2 2849660919 Nostoc sp. T09 Isolate Unclassified
3 2886627955 Nostoc sp. PA-18-2419 JC1668 Isolate Unclassified
4 2894510363 Methylomonas sp. Kb3 Isolate Unclassified
5 2913844669 Nostocales cyanobacterium LEGE 12452 Isolate Unclassified
6 2913912277 Desmonostoc muscorum LEGE 12446 Isolate Unclassified
7 2913939268 Nostoc sp. LEGE 12447 Isolate Unclassified
8 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere
9 2989392574 Methylomonas rhizoryzae GJ1 Isolate Unclassified
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
15 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
16 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
19 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
20 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
21 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
22 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
23 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
24 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
25 3300006194 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 Metagenome Rhizosphere
26 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
29 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
30 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
31 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
32 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
33 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
34 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
35 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
36 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
37 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
38 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
40 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
41 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
53 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
55 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
56 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
57 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
58 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
59 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
60 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
61 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
62 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
63 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
64 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
65 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
66 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
67 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
68 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
69 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
70 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
71 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
72 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
73 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
74 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
75 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
76 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
77 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
78 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
79 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
80 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
81 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
82 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
83 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
84 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
85 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
86 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
87 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
88 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
89 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
90 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
91 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
92 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
93 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
94 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
95 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
96 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
97 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
98 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
99 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
100 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
101 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
102 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
103 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
104 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
105 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
106 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
107 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
108 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
109 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
110 642555144 Nostoc punctiforme PCC 73102 Isolate Unclassified
111 8001522603 Methylomicrobium sp. RS1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 88.37
Metatranscriptomes 3.1
Isolates 8.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 11.63
Nodule 0
Rhizoplane 0
Rhizosphere 71.32
Stem 0
Stem Tuber 0
Unclassified 17.05

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070690_100061499 3300005330 Bacteria 2419
2 Ga0070675_100167513 3300005354 Bacteria 1893
3 Ga0070713_100018421 3300005436 Bacteria 5306
4 Ga0070678_100015310 3300005456 Bacteria 4871
5 Ga0070679_100089547 3300005530 Bacteria 3064
6 Ga0070695_100131697 3300005545 Bacteria 1724
7 Ga0070696_100020966 3300005546 Bacteria 4430
8 Ga0068855_100420031 3300005563 Bacteria 1463
9 Ga0068857_100112590 3300005577 Bacteria 2447
10 Ga0068857_100116889 3300005577 Bacteria 2400
11 Ga0068856_100150922 3300005614 Bacteria 2333
12 Ga0068859_100166297 3300005617 Bacteria 2286
13 Ga0081538_10029625 3300005981 Bacteria 3735
14 Ga0070717_10090982 3300006028 Bacteria 2576
15 Ga0075432_10039307 3300006058 Bacteria 1650
16 Ga0075362_10000014 3300006177 Bacteria 98315
17 Ga0075427_10001178 3300006194 Bacteria 3320
18 Ga0075366_10046812 3300006195 Bacteria 2563
19 Ga0075370_10154227 3300006353 Bacteria 1346
20 Ga0075428_100112211 3300006844 Bacteria 2969
21 Ga0075430_100055931 3300006846 Bacteria 3317
22 Ga0075431_100026100 3300006847 Bacteria 5991
23 Ga0075431_100029740 3300006847 Bacteria 5625
24 Ga0075433_10098713 3300006852 Bacteria 2585
25 Ga0075429_100184782 3300006880 Bacteria 1826
26 Ga0068865_100030171 3300006881 Bacteria 3604
27 Ga0097620_100166301 3300006931 Bacteria 2286
28 Ga0099795_10029864 3300007788 Bacteria 1866
29 Ga0105245_10000375 3300009098 Bacteria 41499
30 Ga0105247_10000590 3300009101 Bacteria 29497
31 Ga0114129_10029682 3300009147 Bacteria 7743
32 Ga0114129_10473559 3300009147 Bacteria 1639
33 Ga0105243_10295458 3300009148 Bacteria 1466
34 Ga0105249_10096319 3300009553 Bacteria 2776
35 Ga0207692_10265126 3300025898 Bacteria 1034
36 Ga0207710_10000740 3300025900 Bacteria 18047
37 Ga0207660_10102674 3300025917 Bacteria 2138
38 Ga0207659_10115923 3300025926 Bacteria 2044
39 Ga0207687_10000048 3300025927 Bacteria 96215
40 Ga0207687_10178596 3300025927 Bacteria 1643
41 Ga0207661_10036087 3300025944 Bacteria 3857
42 Ga0207712_10018597 3300025961 Bacteria 4528
43 Ga0207648_10024668 3300026089 Bacteria 5364
44 Ga0207674_10159175 3300026116 Bacteria 2213
45 Ga0207674_10236821 3300026116 Bacteria 1773
46 Ga0207683_10185604 3300026121 Bacteria 1887
47 Ga0209588_1006623 3300027671 Bacteria 3376
48 Ga0207428_10121662 3300027907 Bacteria 2001
49 Ga0268266_10013613 3300028379 Bacteria 7006
50 Ga0265318_10000742 3300028577 Bacteria 21773
51 Ga0307517_10177633 3300028786 Bacteria 1382
52 Ga0307515_10043907 3300028794 Bacteria 6931
53 Ga0265338_10025075 3300028800 Bacteria 6070
54 Ga0307511_10140107 3300030521 Bacteria 1425
55 Ga0265330_10050568 3300031235 Bacteria 1823
56 Ga0265328_10045710 3300031239 Bacteria 1610
57 Ga0265325_10001617 3300031241 Bacteria 15709
58 Ga0265340_10008154 3300031247 Bacteria 5668
59 Ga0265327_10004409 3300031251 Bacteria 12487
60 Ga0265316_10000825 3300031344 Bacteria 34300
61 Ga0265316_10019023 3300031344 Bacteria 5888
62 Ga0307513_10085738 3300031456 Bacteria 3231
63 Ga0307509_10000559 3300031507 Bacteria 63703
64 Ga0307509_10015196 3300031507 Bacteria 8998
65 Ga0307408_100028654 3300031548 Bacteria 3850
66 Ga0265313_10000613 3300031595 Bacteria 36961
67 Ga0307508_10028337 3300031616 Bacteria 5064
68 Ga0265314_10007013 3300031711 Bacteria 9847
69 Ga0265314_10024571 3300031711 Bacteria 4565
70 Ga0307516_10057779 3300031730 Bacteria 3778
71 Ga0307516_10161331 3300031730 Bacteria 1991
72 Ga0307416_100007656 3300032002 Bacteria 6892
73 Ga0316593_10003034 3300032168 Bacteria 4094
74 Ga0316593_10022447 3300032168 Bacteria 1982
75 Ga0316592_1005146 3300033524 Bacteria 2469
76 Ga0316596_1009188 3300033541 Bacteria 2369
77 Ga0373949_0000022 3300035090 Bacteria 54914
78 Ga0373956_0003713 3300035119 Bacteria 6156
79 Ga0373961_0000031 3300035241 Bacteria 88779
80 Ga0400489_88805 3300039093 Bacteria 7647
81 Ga0436365_1420068 3300039437 Bacteria 4468
82 Ga0436365_1568770 3300039437 Bacteria 4423
83 Ga0451577_0000100 3300042876 Bacteria 191528
84 Ga0466969_0015076 3300044656 Bacteria 4054
85 Ga0453684_0017392 3300044712 Bacteria 11141
86 Ga0453684_0543719 3300044712 Bacteria 1280
87 Ga0466959_0007153 3300045049 Bacteria 7812
88 Ga0495686_0015590 3300047472 Bacteria 5183
89 Ga0501075_0040050 3300049591 Bacteria 3508
90 Ga0501076_0065183 3300049592 Bacteria 2904
91 Ga0501079_0048177 3300049741 Bacteria 3288
92 nmdc:mga03683_9_c1 3300050489 Bacteria 137145
93 nmdc:mga00v17_61_c1 3300050491 Bacteria 67209
94 nmdc:mga05p37_148911_c1 3300050507 Bacteria 2865
95 nmdc:mga05p37_1772_c1 3300050507 Bacteria 25202
96 nmdc:mga09592_10215_c1 3300050508 Bacteria 7639
97 nmdc:mga09592_114316_c1 3300050508 Bacteria 2317
98 nmdc:mga09592_43638_c1 3300050508 Bacteria 3772
99 nmdc:mga09592_74452_c1 3300050508 Bacteria 2885
100 nmdc:mga0qj67_56291_c1 3300050509 Bacteria 3117
101 nmdc:mga06r32_23141_c1 3300050510 Bacteria 5749
102 nmdc:mga06r32_33845_c1 3300050510 Bacteria 4815
103 nmdc:mga0n895_61105_c1 3300050512 Bacteria 3719
104 nmdc:mga0n895_61685_c1 3300050512 Bacteria 3703
105 nmdc:mga0rr50_318688_c1 3300050513 Bacteria 1303
106 nmdc:mga08x19_13184_c1 3300050514 Bacteria 4992
107 nmdc:mga0a205_95931_c1 3300050515 Bacteria 2394
108 Ga0500566_0002722 3300053094 Bacteria 10536
109 Ga0500640_000038 3300053095 Bacteria 20146
110 Ga0500554_000900 3300053102 Bacteria 5816
111 Ga0500572_003295 3300053111 Bacteria 3716
112 Ga0500595_000090 3300053119 Bacteria 62882
113 Ga0500614_000633 3300053123 Bacteria 8957
114 Ga0500559_0003855 3300053136 Bacteria 7253
115 Ga0500603_000647 3300053150 Bacteria 8451
116 Ga0500616_0053637 3300053153 Bacteria 2115
117 Ga0500630_045640 3300053159 Bacteria 2129
118 Ga0501082_0174080 3300060353 Bacteria 1871

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006177 Ga0075362_10000014 Ga0075362_1000001467 303
2 3300050489 nmdc:mga03683_9_c1 nmdc:mga03683_9_c1_37563_38528 303
3 3300050491 nmdc:mga00v17_61_c1 nmdc:mga00v17_61_c1_28693_29658 303
4 3300039093 Ga0400489_88805 Ga0400489_88805_2577_3533 305
5 iso_pu_bacteria 2920107658 2920107848 307
6 3300028577 Ga0265318_10000742 Ga0265318_100007424 309
7 3300031235 Ga0265330_10050568 Ga0265330_100505682 309
8 3300031239 Ga0265328_10045710 Ga0265328_100457101 309
9 3300031241 Ga0265325_10001617 Ga0265325_1000161710 309
10 3300031247 Ga0265340_10008154 Ga0265340_100081543 309
11 3300031344 Ga0265316_10000825 Ga0265316_100008257 309
12 3300031595 Ga0265313_10000613 Ga0265313_1000061332 309
13 3300039437 Ga0436365_1568770 Ga0436365_1568770_2851_3822 309
14 iso_pu_bacteria 2894510363 2894512172 310
15 3300009101 Ga0105247_10000590 Ga0105247_1000059011 311
16 3300025900 Ga0207710_10000740 Ga0207710_1000074012 311
17 3300005456 Ga0070678_100015310 Ga0070678_1000153104 312
18 3300005577 Ga0068857_100116889 Ga0068857_1001168893 312
19 3300005614 Ga0068856_100150922 Ga0068856_1001509222 312
20 3300026116 Ga0207674_10236821 Ga0207674_102368212 312
21 3300026121 Ga0207683_10185604 Ga0207683_101856042 312
22 3300044656 Ga0466969_0015076 Ga0466969_0015076_3009_4004 312
23 3300045049 Ga0466959_0007153 Ga0466959_0007153_6751_7746 312
24 iso_pu_bacteria 2989392574 2989393306 313
25 3300025898 Ga0207692_10265126 Ga0207692_102651261 314
26 3300031251 Ga0265327_10004409 Ga0265327_100044091 314
27 3300031344 Ga0265316_10019023 Ga0265316_100190235 314
28 3300031711 Ga0265314_10007013 Ga0265314_100070137 314
29 3300031730 Ga0307516_10161331 Ga0307516_101613311 314
30 3300032168 Ga0316593_10003034 Ga0316593_100030342 314
31 3300032168 Ga0316593_10022447 Ga0316593_100224472 314
32 3300042876 Ga0451577_0000100 Ga0451577_0000100_4164_5150 314
33 3300044712 Ga0453684_0017392 Ga0453684_0017392_8805_9791 314
34 3300044712 Ga0453684_0543719 Ga0453684_0543719_171_1157 314
35 3300053094 Ga0500566_0002722 Ga0500566_0002722_7955_8935 314
36 3300053095 Ga0500640_000038 Ga0500640_000038_18225_19205 314
37 3300053102 Ga0500554_000900 Ga0500554_000900_2940_3920 314
38 3300053111 Ga0500572_003295 Ga0500572_003295_1189_2169 314
39 3300053119 Ga0500595_000090 Ga0500595_000090_26198_27178 314
40 3300053123 Ga0500614_000633 Ga0500614_000633_467_1447 314
41 3300053136 Ga0500559_0003855 Ga0500559_0003855_296_1276 314
42 3300006353 Ga0075370_10154227 Ga0075370_101542272 315
43 3300053150 Ga0500603_000647 Ga0500603_000647_6030_7013 315
44 3300006195 Ga0075366_10046812 Ga0075366_100468122 316
45 3300031507 Ga0307509_10000559 Ga0307509_1000055927 316
46 3300031730 Ga0307516_10057779 Ga0307516_100577792 316
47 iso_pu_bacteria 2886627955 2886630959 316
48 iso_pu_bacteria 2913844669 2913846400 316
49 iso_pu_bacteria 2913912277 2913918197 316
50 iso_pu_bacteria 2913939268 2913941404 316
51 iso_pu_bacteria 642555144 642599365 316
52 iso_pu_bacteria 2848694841 2848696617 317
53 iso_pu_bacteria 2849660919 2849662322 317
54 iso_pu_bacteria 8001522603 8001525859 317
55 3300005436 Ga0070713_100018421 Ga0070713_1000184215 319
56 3300033524 Ga0316592_1005146 Ga0316592_10051462 321
57 3300033541 Ga0316596_1009188 Ga0316596_10091882 321
58 3300005354 Ga0070675_100167513 Ga0070675_1001675132 325
59 3300005617 Ga0068859_100166297 Ga0068859_1001662972 325
60 3300006931 Ga0097620_100166301 Ga0097620_1001663012 325
61 3300025926 Ga0207659_10115923 Ga0207659_101159232 325
62 3300050508 nmdc:mga09592_43638_c1 nmdc:mga09592_43638_c1_30_1112 326
63 3300006194 Ga0075427_10001178 Ga0075427_100011783 337
64 3300006847 Ga0075431_100026100 Ga0075431_1000261008 337
65 3300009147 Ga0114129_10029682 Ga0114129_100296825 337
66 3300050507 nmdc:mga05p37_1772_c1 nmdc:mga05p37_1772_c1_1838_3007 337
67 3300050508 nmdc:mga09592_10215_c1 nmdc:mga09592_10215_c1_4631_5800 337
68 3300050510 nmdc:mga06r32_33845_c1 nmdc:mga06r32_33845_c1_2565_3734 337
69 3300005981 Ga0081538_10029625 Ga0081538_100296253 345
70 3300007788 Ga0099795_10029864 Ga0099795_100298642 348
71 3300009098 Ga0105245_10000375 Ga0105245_1000037517 348
72 3300025927 Ga0207687_10000048 Ga0207687_1000004875 348
73 3300005530 Ga0070679_100089547 Ga0070679_1000895473 349
74 3300005563 Ga0068855_100420031 Ga0068855_1004200311 349
75 3300005577 Ga0068857_100112590 Ga0068857_1001125902 349
76 3300025917 Ga0207660_10102674 Ga0207660_101026742 349
77 3300026116 Ga0207674_10159175 Ga0207674_101591752 349
78 3300031711 Ga0265314_10024571 Ga0265314_100245715 349
79 3300031548 Ga0307408_100028654 Ga0307408_1000286543 350
80 3300031616 Ga0307508_10028337 Ga0307508_100283375 350
81 3300032002 Ga0307416_100007656 Ga0307416_1000076562 350
82 3300027671 Ga0209588_1006623 Ga0209588_10066232 351
83 3300005546 Ga0070696_100020966 Ga0070696_1000209664 352
84 3300026089 Ga0207648_10024668 Ga0207648_100246683 352
85 3300031456 Ga0307513_10085738 Ga0307513_100857382 352
86 3300050512 nmdc:mga0n895_61685_c1 nmdc:mga0n895_61685_c1_1621_2790 352
87 3300050514 nmdc:mga08x19_13184_c1 nmdc:mga08x19_13184_c1_3109_4278 352
88 3300006028 Ga0070717_10090982 Ga0070717_100909822 353
89 3300009148 Ga0105243_10295458 Ga0105243_102954581 353
90 3300025944 Ga0207661_10036087 Ga0207661_100360872 353
91 3300028379 Ga0268266_10013613 Ga0268266_100136133 353
92 3300028800 Ga0265338_10025075 Ga0265338_100250752 353
93 3300028794 Ga0307515_10043907 Ga0307515_100439077 354
94 3300030521 Ga0307511_10140107 Ga0307511_101401072 354
95 3300031507 Ga0307509_10015196 Ga0307509_100151964 354
96 3300035119 Ga0373956_0003713 Ga0373956_0003713_4946_6115 354
97 3300049591 Ga0501075_0040050 Ga0501075_0040050_239_1408 354
98 3300049592 Ga0501076_0065183 Ga0501076_0065183_60_1229 354
99 3300049741 Ga0501079_0048177 Ga0501079_0048177_2083_3252 354
100 3300053159 Ga0500630_045640 Ga0500630_045640_557_1732 354
101 3300060353 Ga0501082_0174080 Ga0501082_0174080_112_1281 354
102 3300009553 Ga0105249_10096319 Ga0105249_100963192 355
103 3300025927 Ga0207687_10178596 Ga0207687_101785961 355
104 3300025961 Ga0207712_10018597 Ga0207712_100185971 355
105 3300035090 Ga0373949_0000022 Ga0373949_0000022_34410_35579 355
106 3300035241 Ga0373961_0000031 Ga0373961_0000031_56788_57957 355
107 3300047472 Ga0495686_0015590 Ga0495686_0015590_712_1884 355
108 3300053153 Ga0500616_0053637 Ga0500616_0053637_352_1533 355
109 3300005545 Ga0070695_100131697 Ga0070695_1001316972 356
110 3300006058 Ga0075432_10039307 Ga0075432_100393071 356
111 3300006844 Ga0075428_100112211 Ga0075428_1001122113 356
112 3300006846 Ga0075430_100055931 Ga0075430_1000559312 356
113 3300006847 Ga0075431_100029740 Ga0075431_1000297405 356
114 3300006852 Ga0075433_10098713 Ga0075433_100987132 356
115 3300006880 Ga0075429_100184782 Ga0075429_1001847821 356
116 3300009147 Ga0114129_10473559 Ga0114129_104735592 356
117 3300027907 Ga0207428_10121662 Ga0207428_101216621 356
118 3300050507 nmdc:mga05p37_148911_c1 nmdc:mga05p37_148911_c1_1406_2650 356
119 3300050508 nmdc:mga09592_114316_c1 nmdc:mga09592_114316_c1_704_1948 356
120 3300050508 nmdc:mga09592_74452_c1 nmdc:mga09592_74452_c1_1619_2788 356
121 3300050509 nmdc:mga0qj67_56291_c1 nmdc:mga0qj67_56291_c1_680_1924 356
122 3300050510 nmdc:mga06r32_23141_c1 nmdc:mga06r32_23141_c1_3165_4409 356
123 3300050512 nmdc:mga0n895_61105_c1 nmdc:mga0n895_61105_c1_522_1766 356
124 3300050513 nmdc:mga0rr50_318688_c1 nmdc:mga0rr50_318688_c1_80_1252 356
125 3300050515 nmdc:mga0a205_95931_c1 nmdc:mga0a205_95931_c1_612_1856 356
126 3300039437 Ga0436365_1420068 Ga0436365_1420068_422_1588 357
127 3300005330 Ga0070690_100061499 Ga0070690_1000614991 359
128 3300006881 Ga0068865_100030171 Ga0068865_1000301714 359
129 3300028786 Ga0307517_10177633 Ga0307517_101776332 359

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00923

TAL_FSA

Transaldolase/Fructose-6-phosphate aldolase

84

348

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1f05-assembly1.cif.gz_B crystal structure of human transaldolase 0.957 3 309
2e1d-assembly1.cif.gz_A crystal structure of mouse transaldolase 0.9564 3 309
3hjz-assembly1.cif.gz_A the structure of an aldolase from prochlorococcus marinus 0.9486 3 317
3m16-assembly1.cif.gz_A-2 structure of a transaldolase from oleispira antarctica 0.935 1 308
1i2r-assembly1.cif.gz_B crystal structure of escherichia coli transaldolase b mutant s176a 0.9335 3 307
ID Description Score Start End Superfamily
af_P37837_1_337_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9514 2 314 3.20.20.70
af_A0A1L1QZF2_1_286_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9455 2 264 3.20.20.70
3tk7A00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9159 3 307 3.20.20.70
af_P37837_1_337_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8829 2 314 3.20.20.70
af_Q84ZL6_63_393_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8752 4 307 3.20.20.70
ID Description Score Start End GO Terms
AF-A0A366W925-F1-model_v4 Transaldolase 0.9958 156 255 GO:0004801
GO:0005975
GO:0006098
AF-A0A6I1ILT4-F1-model_v4 deleted 0.9942 113 238
AF-A0A656K757-F1-model_v4 deleted 0.994 99 191
AF-A0A1G7QTF6-F1-model_v4 Transaldolase 0.9931 151 242 GO:0004801
GO:0005975
GO:0009052
AF-A0A7G2K0X4-F1-model_v4 Transaldolase (EC 2.2.1.2) 0.9915 106 199 GO:0004801
GO:0005829
GO:0005975
GO:0006098

Feature Viewer

pLDDT pTM Quality
84.47 0.8 High
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Predicted Structure (AlphaFold2)

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