F097934

General Info

Members Datasets Scaffolds Average Seq Length
118 107 117 337

Family's Representative Sequence

Representative Sequence 3300031507|Ga0307509_10003801|Ga0307509_1000380115
Length 362
Sequence MSTVLVTGGSGFIGSYCVLQLLAAGHQVRTTVRNLDREADVRAMLEYGGAEPGERLSFFAANLESDEGWRDAVSGCEYVLHVASPFPAGIPKHEDELIVPARDGALRVLRASRDSGVKRVVLTSSFAAIGYGHKPREKPFDEGDWTDLSSPKLAPYVKSKTLAERAAWDFVAREGRGLELCVINPVAVFGPILGPDYSTSIGLLKGLMDGAMRAVPRLYFGVVDVRDVADLHIRAMTSPAAQGERFLAIAGDCMSVQDMAKVLKAHLGAAGGKVPTWQAPDWLIRIAALRNPTARPVLSELGKIKRASNAKARRVLGWSPRSNEAAIVATADSLVQLAAGQATCVPTSAEHKLGNAGQTHTA

Samples

Sample ID Description Type Environment
1 2558860280 Kutzneria sp. 744 Isolate Unclassified
2 2739367654 Promicromonospora sp. YR516 Isolate Unclassified
3 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
4 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
7 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
8 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
15 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
16 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
17 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
18 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
19 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
20 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
24 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
25 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
26 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
27 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
28 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
29 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
32 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
33 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
34 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
35 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
36 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
37 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
38 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
39 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
49 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
50 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
51 3300030879 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
52 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
53 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
54 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
55 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
56 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
57 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
58 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
59 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
60 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
61 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
62 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
63 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
64 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
65 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
66 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
67 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
68 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
69 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
70 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
71 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
72 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
73 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
74 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
75 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
76 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
77 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
78 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
79 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
80 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
81 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
82 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
83 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
84 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
85 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
86 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
87 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
88 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
89 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
90 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
91 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
92 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
93 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
94 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
95 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
96 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
97 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
98 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
100 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
101 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
102 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
103 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
104 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
105 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
106 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
107 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.61
Metatranscriptomes 1.69
Isolates 1.69

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.93
Nodule 0
Rhizoplane 3.39
Rhizosphere 77.97
Stem 0
Stem Tuber 0
Unclassified 12.71

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 LJNas_1000229 3300000546 Bacteria 9649
2 JGI24740J21852_10001584 3300001979 Bacteria 10460
3 rootH2_10215540 3300003320 Bacteria 1253
4 rootL2_10088973 3300003322 Bacteria 1939
5 rootH1_10061495 3300003316 Bacteria 1865
6 rootH1_10061495 3300003323 Bacteria 5872
7 Ga0055529_1000042 3300003763 Bacteria 225663
8 Ga0068869_100025797 3300005334 Bacteria 4085
9 Ga0070668_100180510 3300005347 Bacteria 1724
10 Ga0070669_100289251 3300005353 Bacteria 1315
11 Ga0070675_100223295 3300005354 Bacteria 1641
12 Ga0070681_10004950 3300005458 Bacteria 12810
13 Ga0068853_100004433 3300005539 Bacteria 10873
14 Ga0070686_100183522 3300005544 Bacteria 1488
15 Ga0070665_100031543 3300005548 Bacteria 5334
16 Ga0068855_100332020 3300005563 Bacteria 1678
17 Ga0070664_100477498 3300005564 Bacteria 1147
18 Ga0068857_100158921 3300005577 Bacteria 2050
19 Ga0068856_100037274 3300005614 Bacteria 4771
20 Ga0068852_100226405 3300005616 Bacteria 1781
21 Ga0068864_100155960 3300005618 Bacteria 2072
22 Ga0068861_100029875 3300005719 Bacteria 3990
23 Ga0068861_100188613 3300005719 Bacteria 1722
24 Ga0081455_10003309 3300005937 Bacteria 18639
25 Ga0070717_10004922 3300006028 Bacteria 9717
26 Ga0070716_100125427 3300006173 Bacteria 1614
27 Ga0075430_100009693 3300006846 Bacteria 8136
28 Ga0075431_100010600 3300006847 Bacteria 9269
29 Ga0099795_10000365 3300007788 Bacteria 8128
30 Ga0114129_10017410 3300009147 Bacteria 10236
31 Ga0114129_10476150 3300009147 Bacteria 1634
32 Ga0105238_10060130 3300009551 Bacteria 3805
33 Ga0099796_10004703 3300010159 Bacteria 3332
34 Ga0105239_10191947 3300010375 Unclassified 2286
35 Ga0157374_10152547 3300013296 Bacteria 2247
36 Ga0157380_10020926 3300014326 Bacteria 4899
37 Ga0213872_10023714 3300021361 Bacteria 2822
38 Ga0209148_1000026 3300025254 Bacteria 629213
39 Ga0209455_1000005 3300025272 Bacteria 1416756
40 Ga0207647_10015207 3300025904 Bacteria 5284
41 Ga0207707_10074765 3300025912 Bacteria 2955
42 Ga0207652_10065718 3300025921 Bacteria 3142
43 Ga0207694_10038597 3300025924 Bacteria 3672
44 Ga0207689_10008755 3300025942 Bacteria 8800
45 Ga0207667_10240573 3300025949 Bacteria 1852
46 Ga0207667_10297461 3300025949 Bacteria 1649
47 Ga0207702_10015312 3300026078 Bacteria 6357
48 Ga0207674_10137906 3300026116 Bacteria 2400
49 Ga0207675_100019024 3300026118 Bacteria 6411
50 Ga0207675_100110211 3300026118 Bacteria 2597
51 Ga0207675_100138619 3300026118 Bacteria 2310
52 Ga0207698_10116333 3300026142 Bacteria 2253
53 Ga0307515_10004328 3300028794 Bacteria 29443
54 Ga0307515_10347552 3300028794 Bacteria 1132
55 Ga0265770_1017189 3300030878 Bacteria 1115
56 Ga0265765_1002621 3300030879 Bacteria 1755
57 Ga0265320_10109399 3300031240 Bacteria 1267
58 Ga0265327_10013786 3300031251 Bacteria 5342
59 Ga0265327_10047509 3300031251 Bacteria 2264
60 Ga0307513_10043909 3300031456 Bacteria 4903
61 Ga0307509_10003801 3300031507 Bacteria 22384
62 Ga0307406_10394684 3300031901 Bacteria 1095
63 Ga0307507_10045829 3300033179 Bacteria 4295
64 Ga0307510_10063599 3300033180 Bacteria 3756
65 Ga0373934_0044506 3300035086 Bacteria 1755
66 Ga0436360_0342790 3300039438 Bacteria 1385
67 Ga0436361_0510731 3300039447 Bacteria 1699
68 Ga0451577_0402548 3300042876 Bacteria 1242
69 Ga0453683_0052063 3300044673 Bacteria 2564
70 Ga0453684_0178809 3300044712 Bacteria 2492
71 Ga0495629_0081524 3300046459 Bacteria 2258
72 Ga0495638_0089349 3300046460 Bacteria 1859
73 Ga0495651_0014068 3300046462 Bacteria 6189
74 Ga0495650_0000461 3300046471 Bacteria 63382
75 Ga0495662_0039220 3300046476 Bacteria 2288
76 Ga0495583_0002396 3300046506 Bacteria 16129
77 Ga0495666_0151975 3300046526 Bacteria 1076
78 Ga0495652_0058004 3300046529 Bacteria 3281
79 Ga0495640_0001535 3300046533 Bacteria 18188
80 Ga0495634_0053777 3300046642 Bacteria 2696
81 Ga0495661_0166992 3300046665 Bacteria 1177
82 Ga0495657_0009643 3300046675 Bacteria 7308
83 Ga0495613_0004303 3300046689 Bacteria 10659
84 Ga0495600_0006053 3300046809 Bacteria 7328
85 Ga0495604_0003615 3300047317 Bacteria 12325
86 Ga0495676_0001019 3300047321 Bacteria 23662
87 Ga0496102_0518297 3300048905 Bacteria 1115
88 Ga0496104_0577315 3300048907 Bacteria 1035
89 Ga0496113_0093897 3300048916 Bacteria 2317
90 Ga0496115_0299545 3300048918 Bacteria 1318
91 Ga0496117_0096866 3300048920 Unclassified 1881
92 Ga0496118_0059114 3300048921 Bacteria 2858
93 Ga0496121_0019695 3300048924 Bacteria 6731
94 Ga0496126_0052926 3300048929 Bacteria 3686
95 Ga0501032_0084872 3300049569 Bacteria 2105
96 Ga0501033_0011348 3300049570 Bacteria 6817
97 Ga0501034_0053604 3300049571 Bacteria 4060
98 Ga0501034_0153273 3300049571 Bacteria 2280
99 Ga0501034_0441164 3300049571 Bacteria 1220
100 Ga0501036_0058154 3300049572 Bacteria 3275
101 Ga0501037_0008503 3300049573 Bacteria 7527
102 Ga0501038_0010261 3300049574 Bacteria 8570
103 Ga0501038_0117563 3300049574 Bacteria 2196
104 Ga0501042_0038878 3300049578 Bacteria 3379
105 Ga0501043_0005635 3300049579 Bacteria 10084
106 Ga0501047_0103567 3300049581 Bacteria 2726
107 Ga0501048_0004692 3300049582 Bacteria 10402
108 Ga0501068_0303038 3300049584 Bacteria 1023
109 Ga0501080_0025665 3300049742 Bacteria 5473
110 Ga0501035_0054298 3300049822 Bacteria 3580
111 Ga0501035_0155933 3300049822 Bacteria 1979
112 nmdc:mga06z11_156843_c1 3300050494 Bacteria 1298
113 nmdc:mga06r32_26521_c1 3300050510 Bacteria 5403
114 Ga0495595_0062457 3300053084 Bacteria 1747
115 Ga0500595_014079 3300053119 Bacteria 3045
116 Ga0500559_0000710 3300053136 Bacteria 21857
117 Ga0500616_0000138 3300053153 Bacteria 124476

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300046476 Ga0495662_0039220 Ga0495662_0039220_21_902 287
2 3300049742 Ga0501080_0025665 Ga0501080_0025665_4138_5067 290
3 3300028794 Ga0307515_10347552 Ga0307515_103475522 294
4 3300039447 Ga0436361_0510731 Ga0436361_0510731_195_1091 298
5 3300009147 Ga0114129_10476150 Ga0114129_104761502 299
6 3300031240 Ga0265320_10109399 Ga0265320_101093991 299
7 3300048905 Ga0496102_0518297 Ga0496102_0518297_35_961 299
8 3300048918 Ga0496115_0299545 Ga0496115_0299545_349_1275 299
9 3300048929 Ga0496126_0052926 Ga0496126_0052926_93_998 299
10 3300048907 Ga0496104_0577315 Ga0496104_0577315_11_916 300
11 3300005563 Ga0068855_100332020 Ga0068855_1003320202 301
12 3300025949 Ga0207667_10297461 Ga0207667_102974612 302
13 3300003763 Ga0055529_1000042 Ga0055529_1000042237 303
14 3300025949 Ga0207667_10240573 Ga0207667_102405731 303
15 3300025254 Ga0209148_1000026 Ga0209148_1000026620 304
16 3300025272 Ga0209455_1000005 Ga0209455_10000051367 304
17 3300005347 Ga0070668_100180510 Ga0070668_1001805102 306
18 3300005353 Ga0070669_100289251 Ga0070669_1002892512 306
19 3300005719 Ga0068861_100188613 Ga0068861_1001886132 306
20 3300026118 Ga0207675_100110211 Ga0207675_1001102112 306
21 3300005544 Ga0070686_100183522 Ga0070686_1001835222 307
22 3300042876 Ga0451577_0402548 Ga0451577_0402548_79_1005 307
23 3300049584 Ga0501068_0303038 Ga0501068_0303038_58_984 307
24 3300005614 Ga0068856_100037274 Ga0068856_1000372744 319
25 3300026078 Ga0207702_10015312 Ga0207702_100153124 319
26 3300050494 nmdc:mga06z11_156843_c1 nmdc:mga06z11_156843_c1_265_1230 320
27 iso_pu_bacteria 2739367654 2739605323 322
28 3300005334 Ga0068869_100025797 Ga0068869_1000257972 323
29 3300005719 Ga0068861_100029875 Ga0068861_1000298753 323
30 3300025942 Ga0207689_10008755 Ga0207689_100087555 323
31 3300026118 Ga0207675_100019024 Ga0207675_1000190243 323
32 3300003320 rootH2_10215540 rootH2_102155401 327
33 3300003323 rootH1_10061495 rootH1_100614956 327
34 3300046526 Ga0495666_0151975 Ga0495666_0151975_18_1019 328
35 3300049578 Ga0501042_0038878 Ga0501042_0038878_16_1020 328
36 3300031901 Ga0307406_10394684 Ga0307406_103946841 329
37 3300005354 Ga0070675_100223295 Ga0070675_1002232952 330
38 3300005618 Ga0068864_100155960 Ga0068864_1001559602 330
39 3300014326 Ga0157380_10020926 Ga0157380_100209262 330
40 3300026118 Ga0207675_100138619 Ga0207675_1001386192 330
41 3300006173 Ga0070716_100125427 Ga0070716_1001254271 331
42 3300035086 Ga0373934_0044506 Ga0373934_0044506_107_1132 331
43 3300048920 Ga0496117_0096866 Ga0496117_0096866_690_1706 332
44 3300048921 Ga0496118_0059114 Ga0496118_0059114_282_1298 332
45 3300053084 Ga0495595_0062457 Ga0495595_0062457_465_1541 332
46 iso_pu_bacteria 2558860280 2559423213 334
47 3300010375 Ga0105239_10191947 Ga0105239_101919473 335
48 3300005539 Ga0068853_100004433 Ga0068853_1000044331 338
49 3300005616 Ga0068852_100226405 Ga0068852_1002264052 338
50 3300025924 Ga0207694_10038597 Ga0207694_100385973 338
51 3300026142 Ga0207698_10116333 Ga0207698_101163332 338
52 3300001979 JGI24740J21852_10001584 JGI24740J21852_100015844 339
53 3300003322 rootL2_10088973 rootL2_100889732 340
54 3300009551 Ga0105238_10060130 Ga0105238_100601303 340
55 3300031251 Ga0265327_10013786 Ga0265327_100137865 340
56 3300031251 Ga0265327_10047509 Ga0265327_100475093 340
57 3300033179 Ga0307507_10045829 Ga0307507_100458295 340
58 3300033180 Ga0307510_10063599 Ga0307510_100635994 340
59 3300046459 Ga0495629_0081524 Ga0495629_0081524_1102_2127 340
60 3300046471 Ga0495650_0000461 Ga0495650_0000461_7470_8495 340
61 3300046506 Ga0495583_0002396 Ga0495583_0002396_498_1523 340
62 3300046665 Ga0495661_0166992 Ga0495661_0166992_89_1114 340
63 3300046809 Ga0495600_0006053 Ga0495600_0006053_1638_2663 340
64 3300049571 Ga0501034_0153273 Ga0501034_0153273_1072_2109 340
65 3300053119 Ga0500595_014079 Ga0500595_014079_409_1434 340
66 3300005458 Ga0070681_10004950 Ga0070681_1000495010 341
67 3300005548 Ga0070665_100031543 Ga0070665_1000315432 341
68 3300005564 Ga0070664_100477498 Ga0070664_1004774982 341
69 3300005577 Ga0068857_100158921 Ga0068857_1001589213 341
70 3300006846 Ga0075430_100009693 Ga0075430_1000096933 341
71 3300021361 Ga0213872_10023714 Ga0213872_100237142 341
72 3300025912 Ga0207707_10074765 Ga0207707_100747653 341
73 3300025921 Ga0207652_10065718 Ga0207652_100657184 341
74 3300026116 Ga0207674_10137906 Ga0207674_101379064 341
75 3300006028 Ga0070717_10004922 Ga0070717_100049223 342
76 3300007788 Ga0099795_10000365 Ga0099795_100003652 342
77 3300010159 Ga0099796_10004703 Ga0099796_100047033 342
78 3300030878 Ga0265770_1017189 Ga0265770_10171891 342
79 3300030879 Ga0265765_1002621 Ga0265765_10026211 342
80 3300031456 Ga0307513_10043909 Ga0307513_100439092 342
81 3300031507 Ga0307509_10003801 Ga0307509_1000380115 342
82 3300049571 Ga0501034_0441164 Ga0501034_0441164_23_1063 342
83 3300049574 Ga0501038_0117563 Ga0501038_0117563_843_1883 342
84 3300049581 Ga0501047_0103567 Ga0501047_0103567_521_1561 342
85 3300053136 Ga0500559_0000710 Ga0500559_0000710_18363_19397 342
86 3300053153 Ga0500616_0000138 Ga0500616_0000138_31471_32502 342
87 3300005937 Ga0081455_10003309 Ga0081455_100033096 343
88 3300044712 Ga0453684_0178809 Ga0453684_0178809_908_1942 343
89 3300049570 Ga0501033_0011348 Ga0501033_0011348_2778_3815 343
90 3300049822 Ga0501035_0155933 Ga0501035_0155933_908_1945 343
91 3300013296 Ga0157374_10152547 Ga0157374_101525473 344
92 3300025904 Ga0207647_10015207 Ga0207647_100152076 344
93 3300028794 Ga0307515_10004328 Ga0307515_1000432825 344
94 3300046462 Ga0495651_0014068 Ga0495651_0014068_939_1997 344
95 3300046529 Ga0495652_0058004 Ga0495652_0058004_1093_2142 344
96 3300046533 Ga0495640_0001535 Ga0495640_0001535_4151_5200 344
97 3300046642 Ga0495634_0053777 Ga0495634_0053777_45_1094 344
98 3300046675 Ga0495657_0009643 Ga0495657_0009643_4174_5223 344
99 3300046689 Ga0495613_0004303 Ga0495613_0004303_7123_8172 344
100 3300047317 Ga0495604_0003615 Ga0495604_0003615_8800_9849 344
101 3300047321 Ga0495676_0001019 Ga0495676_0001019_4161_5210 344
102 3300048916 Ga0496113_0093897 Ga0496113_0093897_70_1134 344
103 3300048924 Ga0496121_0019695 Ga0496121_0019695_5533_6576 344
104 3300049569 Ga0501032_0084872 Ga0501032_0084872_476_1564 344
105 3300049571 Ga0501034_0053604 Ga0501034_0053604_477_1565 344
106 3300049572 Ga0501036_0058154 Ga0501036_0058154_1081_2169 344
107 3300049573 Ga0501037_0008503 Ga0501037_0008503_2394_3482 344
108 3300049574 Ga0501038_0010261 Ga0501038_0010261_4863_5951 344
109 3300049579 Ga0501043_0005635 Ga0501043_0005635_1870_2958 344
110 3300049582 Ga0501048_0004692 Ga0501048_0004692_1698_2786 344
111 3300049822 Ga0501035_0054298 Ga0501035_0054298_123_1211 344
112 3300044673 Ga0453683_0052063 Ga0453683_0052063_606_1643 345
113 3300006847 Ga0075431_100010600 Ga0075431_1000106008 349
114 3300009147 Ga0114129_10017410 Ga0114129_100174105 349
115 3300050510 nmdc:mga06r32_26521_c1 nmdc:mga06r32_26521_c1_115_1194 349
116 3300046460 Ga0495638_0089349 Ga0495638_0089349_330_1520 361
117 3300039438 Ga0436360_0342790 Ga0436360_0342790_76_1260 365
118 3300000546 LJNas_1000229 LJNas_10002295 368

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01370

Epimerase

NAD dependent epimerase/dehydratase family

4

249

0.81

PF01073

3Beta_HSD

3-beta hydroxysteroid dehydrogenase/isomerase family

5

267

0.78

PF07993

NAD_binding_4

Male sterility protein

6

220

0.78

PF16363

GDP_Man_Dehyd

GDP-mannose 4,6 dehydratase

5

330

0.78

PF13460

NAD_binding_10

NAD(P)H-binding

8

187

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
4qtz-assembly1.cif.gz_A crystal structure of cinnamyl-alcohol dehydrogenase 2 0.8985 26 367
4quk-assembly1.cif.gz_A crystal structure of cinnamyl-alcohol dehydrogenase 2 mutant k169a 0.8971 27 367
4quk-assembly1.cif.gz_A crystal structure of cinnamyl-alcohol dehydrogenase 2 mutant k169a 0.8944 27 367
4qtz-assembly1.cif.gz_A crystal structure of cinnamyl-alcohol dehydrogenase 2 0.8931 26 367
4r1u-assembly1.cif.gz_A crystal structure of medicago truncatula cinnamoyl-coa reductase 0.8922 26 365
ID Description Score Start End Superfamily
af_Q19391_1_343_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9454 27 368 3.40.50.720
af_Q2G146_1_341_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.937 26 365 3.40.50.720
af_Q2G146_1_341_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9317 26 365 3.40.50.720
af_Q19391_1_343_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9294 27 368 3.40.50.720
af_A0A0P0VRA9_111_287_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9047 181 366 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A434SK63-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9872 54 368 GO:0016616
AF-A0A529VC85-F1-model_v4 deleted 0.9872 181 367
AF-A0A434TVA9-F1-model_v4 Aldehyde reductase 0.9869 212 368
AF-A0A7Y7YBD3-F1-model_v4 NAD-dependent epimerase/dehydratase family protein 0.9847 162 367 GO:0016616
AF-A0A3S1PFN8-F1-model_v4 Aldehyde reductase 0.9844 227 367 GO:0004029
GO:0005737

Feature Viewer

pLDDT pTM Quality
89.96 0.88 High
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Predicted Structure (AlphaFold2)

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