F440437

General Info

Members Datasets Scaffolds Average Seq Length
423 286 309 943

Family's Representative Sequence

Representative Sequence 3300002737|JGI25162J39368_1000016|JGI25162J39368_1000016144
Length 1021
Sequence LAQISKQSKTYLDSANFFRIFAFRKKDHGQLSIDHSFEKQLWSMDHRLSTIMTKEAEKDPQKHIIIKGARVHNLKNMDVAIPKNKLVVVTGMSGSGKSSLAFDTLYAEGQRRYVESLSSYARQFLGRMNKPDVDYIKGIAPAIAIEQKVITSNPRSTVGTSTEIYDYLKLLFSRIGKTISPVSGQIVKKDSVTDVVNFILSLPNESQVTVLAPLYPHNNRSLKEELAVLMQKGFVRVEYLNKLSKIEALLEDESIENTSLIAETHGEKKAKGKKLKAESEETITQEEEAPTHYPGVRIVIDRISKNEEDETISRLGDSVQTAFFEGKGDCYVRYQEPDADGELERFFCDRFELDGIKFEEPTPNFFSFNNPYGACKKCEGYGKVIGIDEDLVIPDKSKSIYEGAIAPWRGEKMREWNDILIKHALQFDFPIHRQYNQLTEKQQRLLWTGNKYFRGLDEFFHEMEAQTYKIQYRVMLSRYRGKTTCPECKGSRLRKDASYVKINERSITDVVLMPLDRALEFFKGLQLNETDAKVGKRLLMEITNRLSFLNDVGLSYLTLNRLSNTLSGGESQRINLATSLGSSLVGSVYVLDEPSIGLHPRDTQRLISVLKSLRDVGNTVLVVEHEEEIMEAADHIIDIGPEAGTHGGELIFTGTYKEILKDEHSLTGKYLSGRESIAIPAHRRKWNDYIEIKGARENNLQHVTAKFPLGVLTVVTGVSGSGKTSLVKRILAPALQKALGNYSGEQTGSYDGIDGDYAKIEQVELVDQNPIGRSSRSNPVTYVKAWDEIRNLYASQPAAKAAGLKPSAFSFNVEGGRCDVCQGEGEVKIEMQFMADIFLTCETCGGNRFKQHILDITYNEKNVAEVLRMTIDEALIFFAKEPKIIAKIKPLVDVGLGYVQLGQSSNTLSGGEAQRIKLASFLVKGNNTNKTLFIFDEPTTGLHFADIKKLLKSFDALLEHGNTIIVIEHNMDVIKCADWIIDIGPEGGDRGGKVVFEGVPEDLIKEKKSHTGYYLKERFGK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2511231000 Chryseobacterium populi CF314 Isolate Rhizosphere
3 2513020052 Flavobacterium sp. CF136 Isolate Rhizosphere
4 2519899754 Flavobacterium sp. F52 Isolate Rhizosphere
5 2523533629 Kaistella palustris DSM 21579 Isolate Rhizosphere
6 2582581278 Chryseobacterium sp. CF365 Isolate Rhizosphere
7 2582581281 Chryseobacterium sp. CF284 Isolate Rhizosphere
8 2582581282 Chryseobacterium sp. CF299 Isolate Rhizosphere
9 2582581873 Chryseobacterium sp. OV259 Isolate Rhizosphere
10 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
11 2585428045 Chryseobacterium sp. OV705 Isolate Rhizosphere
12 2585428060 Chryseobacterium sp. OV715 Isolate Rhizosphere
13 2585428061 Chryseobacterium sp. CF356 Isolate Rhizosphere
14 2585428095 Chryseobacterium sp. YR005 Isolate Rhizosphere
15 2585428115 Chryseobacterium sp. YR561 Isolate Rhizosphere
16 2585428182 Chryseobacterium sp. YR477 Isolate Rhizosphere
17 2585428183 Chryseobacterium sp. YR485 Isolate Rhizosphere
18 2585428184 Chryseobacterium sp. YR480 Isolate Rhizosphere
19 2585428185 Chryseobacterium sp. YR459 Isolate Rhizosphere
20 2585428187 Chryseobacterium sp. YR460 Isolate Rhizosphere
21 2588253712 Chryseobacterium sp. OV279 Isolate Rhizosphere
22 2588254255 Chryseobacterium sp. YR221 Isolate Rhizosphere
23 2588254257 Chryseobacterium sp. YR203 Isolate Rhizosphere
24 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
25 2643221600 Flavobacterium sp. Root186 Isolate Unclassified
26 2643221667 Flavobacterium sp. Root420 Isolate Unclassified
27 2643221716 Flavobacterium sp. Root901 Isolate Unclassified
28 2643221725 Flavobacterium sp. Root935 Isolate Unclassified
29 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
30 2728369107 Chryseobacterium kwangjuense KJ1R5 Isolate Unclassified
31 2738541273 Elizabethkingia sp. YR214 Isolate Unclassified
32 2738541279 Flavobacterium sp. GV069 Isolate Unclassified
33 2738541283 Pedobacter sp. OK701 Isolate Unclassified
34 2738541284 Pedobacter sp. YR016 Isolate Unclassified
35 2738541285 Flavobacterium sp. GV030 Isolate Unclassified
36 2738541302 Pedobacter sp. CF074 Isolate Unclassified
37 2738543007 Flavobacterium sp. GV063 Isolate Unclassified
38 2738543014 Elizabethkingia sp. YR191 Isolate Unclassified
39 2738543023 Pedobacter sp. OK628 Isolate Unclassified
40 2739367651 Pedobacter sp. OK291 Isolate Unclassified
41 2739367656 Pedobacter sp. CF523 Isolate Unclassified
42 2739367663 Pedobacter sp. YR510 Isolate Unclassified
43 2739367857 Flavobacterium sp. GV029 Isolate Unclassified
44 2739367858 Flavobacterium sp. GV028 Isolate Unclassified
45 2739367874 Chryseobacterium sp. T16E-39 Isolate Unclassified
46 2751185877 Chryseobacterium artocarpi UTM-3 Isolate Rhizosphere
47 2765235839 Chryseobacterium indologenes AA5 Isolate Unclassified
48 2772190705 Chryseobacterium contaminans C-26 Isolate Rhizosphere
49 2775506739 Chryseobacterium sp. 1335 Isolate Unclassified
50 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
51 2802428842 Flavobacterium sp. S87F.05.LMB.W.Kidney.N Isolate Unclassified
52 2816332188 Chryseobacterium aquifrigidense 110 (version 2) Isolate Unclassified
53 2816332280 Flavobacterium johnsoniae GSE09 Isolate Unclassified
54 2818991437 Pedobacter terrae 518 Isolate Unclassified
55 2842083920 Chryseobacterium lathyri KCTC 22544 Isolate Rhizosphere
56 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
57 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
58 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
59 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
60 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
61 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
62 2857613821 Flavobacterium sp. R-72247 Isolate Unclassified
63 2857618242 Flavobacterium sp. R-74482 Isolate Unclassified
64 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
65 2871720351 Chryseobacterium sp. KLBC 52 Isolate Nodule
66 2881247448 Flavobacterium beibuense RSKm HC5 Isolate Rhizosphere
67 2881359912 Flavobacterium ustbae T13 Isolate Rhizosphere
68 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
69 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
70 2889290771 Chryseobacterium sp. PvR013 Isolate Rhizosphere
71 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
72 2890804823 Fluviicola sp. SGL-29 Isolate Rhizosphere
73 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
74 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
75 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
76 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
77 2903895155 Flavobacterium sp. HBTb2-11-1 Isolate Rhizosphere
78 2904419702 Flavobacterium sp. 1355 Isolate Rhizosphere
79 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
80 2904555929 Flavobacterium sp. 1750 Isolate Rhizosphere
81 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
82 2905999023 Chryseobacterium elymi KCTC 22547 Isolate Rhizosphere
83 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
84 2919097161 Chryseobacterium ginsenosidimutans 1394 Isolate Rhizosphere
85 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
86 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
87 2919191525 Flavobacterium sp. 2755 Isolate Rhizosphere
88 2919399522 Chryseobacterium sp. 2987 Isolate Unclassified
89 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
90 2919509842 Flavobacterium arsenatis 3773 Isolate Unclassified
91 2919683626 Flavobacterium piscis 4129 Isolate Unclassified
92 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
93 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
94 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
95 2929150217 Flavobacterium sp. R-74510 Hybrid assembly Isolate Unclassified
96 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
97 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
98 2945924605 Chryseobacterium ginsenosidimutans W1I9 Isolate Rhizosphere
99 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
100 2946019816 Chryseobacterium sp. W4I1 Isolate Rhizosphere
101 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
102 2958458903 Flavobacterium anhuiense RCM74 Isolate Rhizosphere
103 2965320100 Flavobacterium agri MAH-1 Isolate Rhizosphere
104 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
105 2977243572 Chryseobacterium sp. SORGH_AS 447 Isolate Unclassified
106 2977268062 Flavobacterium sp. SORGH_AS 622 Isolate Unclassified
107 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
108 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root
109 2993372514 Chryseobacterium sp. SLBN-27 Isolate Rhizosphere
110 2993480792 Chryseobacterium nepalense SLBN-92 Isolate Rhizosphere
111 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
112 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
113 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
114 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
115 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
116 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
117 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
118 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
119 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
120 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
121 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
122 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
123 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
124 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
125 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
126 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
127 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
128 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
129 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
130 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
131 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
132 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
133 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
134 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
135 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
136 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
137 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
138 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
139 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
140 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
141 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
142 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
143 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
144 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
145 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
146 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
147 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
148 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
149 3300006942 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW Metagenome Nodule
150 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
151 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
152 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
153 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
154 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
155 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
156 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
157 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
158 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
159 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
160 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
161 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
162 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
163 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
164 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
165 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
166 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
167 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
168 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
169 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
170 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
171 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
172 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
173 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
174 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
175 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
176 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
177 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
178 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
179 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
180 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
181 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
182 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
183 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
184 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
185 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
186 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
187 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
188 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
189 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
190 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
191 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
192 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
193 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
194 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
195 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
196 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
197 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
198 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
199 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
200 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
201 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
202 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
203 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
204 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
205 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
206 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
207 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
208 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
209 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
210 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
211 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
212 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
213 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
214 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
215 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
216 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
217 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
218 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
219 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
220 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
221 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
222 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
223 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
224 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
225 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
226 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
227 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
228 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
229 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
230 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
231 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
232 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
233 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
234 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
235 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
236 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
237 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
238 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
239 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
240 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
241 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
242 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
243 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
244 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
245 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
246 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
247 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
248 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
249 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
250 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
251 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
252 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
253 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
254 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
255 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
256 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
257 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
258 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
259 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
260 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
261 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
262 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
263 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
264 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
265 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
266 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
267 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
268 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
269 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
270 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
271 3300049763 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C11_A_4_control Metagenome Rhizosphere
272 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
273 3300049776 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H24_A_5_drought Metagenome Rhizosphere
274 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
275 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
276 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
277 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
278 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
279 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
280 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
281 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
282 8054307821 Flavobacterium soyae SCIV07 Isolate Rhizosphere
283 8055419101 Flavobacterium tyrosinilyticum KCTC 42726 Isolate Rhizosphere
284 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere
285 8055592153 Flavobacterium panacis DCY106 Isolate Rhizosphere
286 8056440228 Flavobacterium hibisci THG-HG1.4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.05
Metatranscriptomes 0
Isolates 26.95

Biome Distribution

Category Percentage (%)
Aerial Root 0.47
Bulb 0
Endosphere 7.09
Nodule 1.18
Rhizoplane 0.47
Rhizosphere 72.58
Stem 0
Stem Tuber 0
Unclassified 18.2

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_2422272 2162886007 Bacteria 11793
2 SwRhRL2b_contig_509673 2162886007 Bacteria 2884
3 JGI24737J22298_10001214 3300001990 Bacteria 9089
4 JGI24735J21928_10000015 3300002067 Bacteria 167231
5 JGI25162J39368_1000016 3300002737 Bacteria 288734
6 JGI25164J39214_1000962 3300002772 Bacteria 9240
7 JGI25152J39213_1000537 3300002773 Bacteria 20946
8 JGI25150J39212_1000001 3300002774 Bacteria 1318726
9 JGI25151J46595_10000001 3300003187 Bacteria 887211
10 JGI25165J46597_1000728 3300003214 Bacteria 25784
11 JGI25153J46596_10000001 3300003215 Bacteria 748985
12 rootH2_10011116 3300003320 Bacteria 111907
13 Ga0055536_1000038 3300003781 Bacteria 133102
14 Ga0055530_10000250 3300003791 Bacteria 48786
15 Ga0065714_10002656 3300005288 Bacteria 14911
16 Ga0065714_10002719 3300005288 Bacteria 11749
17 Ga0065714_10003459 3300005288 Bacteria 7433
18 Ga0065714_10003658 3300005288 Bacteria 10172
19 Ga0065714_10003783 3300005288 Bacteria 11572
20 Ga0065714_10004483 3300005288 Bacteria 9292
21 Ga0065714_10065255 3300005288 Bacteria 11438
22 Ga0065704_10070251 3300005289 Bacteria 48366
23 Ga0065704_10071762 3300005289 Bacteria 9989
24 Ga0065704_10075398 3300005289 Bacteria 5615
25 Ga0065704_10076512 3300005289 Bacteria 5094
26 Ga0065704_10085240 3300005289 Bacteria 3243
27 Ga0065704_10089113 3300005289 Bacteria 2884
28 Ga0070658_10000041 3300005327 Bacteria 134208
29 Ga0070676_10001756 3300005328 Bacteria 11020
30 Ga0070682_100000507 3300005337 Bacteria 24434
31 Ga0070660_100015981 3300005339 Bacteria 5436
32 Ga0070673_100005959 3300005364 Bacteria 7880
33 Ga0070659_100001388 3300005366 Bacteria 17468
34 Ga0070659_100034141 3300005366 Bacteria 3955
35 Ga0070663_100010142 3300005455 Bacteria 5862
36 Ga0070678_100005395 3300005456 Bacteria 7377
37 Ga0070662_100000020 3300005457 Bacteria 99425
38 Ga0070681_10008323 3300005458 Bacteria 10161
39 Ga0068867_100000492 3300005459 Bacteria 26405
40 Ga0070685_10019643 3300005466 Bacteria 3649
41 Ga0070679_100018533 3300005530 Bacteria 6757
42 Ga0070684_100026921 3300005535 Bacteria 4848
43 Ga0068853_100020134 3300005539 Bacteria 5546
44 Ga0070693_100000328 3300005547 Bacteria 21805
45 Ga0070665_100000125 3300005548 Bacteria 146809
46 Ga0068855_100000246 3300005563 Bacteria 68191
47 Ga0068855_100000522 3300005563 Bacteria 47210
48 Ga0068855_100008142 3300005563 Bacteria 12670
49 Ga0068857_100004876 3300005577 Bacteria 11384
50 Ga0068856_100000021 3300005614 Bacteria 145017
51 Ga0068856_100000690 3300005614 Bacteria 36629
52 Ga0068852_100003213 3300005616 Bacteria 11411
53 Ga0097621_100000087 3300006237 Bacteria 49983
54 Ga0068871_100000316 3300006358 Bacteria 33595
55 Ga0068865_100000037 3300006881 Bacteria 81388
56 Ga0099824_1006455 3300006942 Bacteria 16073
57 Ga0079104_1000271 3300006946 Bacteria 67895
58 Ga0099826_10002269 3300006948 Bacteria 12296
59 Ga0105244_10000003 3300009036 Bacteria 494610
60 Ga0105244_10006831 3300009036 Bacteria 7335
61 Ga0105240_10000128 3300009093 Bacteria 156107
62 Ga0105240_10001151 3300009093 Bacteria 46302
63 Ga0105240_10003925 3300009093 Bacteria 22967
64 Ga0105240_10004108 3300009093 Bacteria 22346
65 Ga0105240_10019508 3300009093 Bacteria 9058
66 Ga0105243_10000016 3300009148 Bacteria 235629
67 Ga0105243_10006502 3300009148 Bacteria 9035
68 Ga0105241_10001158 3300009174 Bacteria 20034
69 Ga0105241_10014600 3300009174 Bacteria 5751
70 Ga0105241_10017058 3300009174 Bacteria 5332
71 Ga0105237_10001477 3300009545 Bacteria 30982
72 Ga0105237_10002031 3300009545 Bacteria 25729
73 Ga0105239_10000077 3300010375 Bacteria 135944
74 Ga0105239_10000115 3300010375 Bacteria 113217
75 Ga0105239_10001575 3300010375 Bacteria 30140
76 Ga0105239_10002353 3300010375 Bacteria 24104
77 Ga0105239_10062091 3300010375 Bacteria 4101
78 Ga0157373_10000012 3300013100 Bacteria 188666
79 Ga0157373_10000036 3300013100 Bacteria 122723
80 Ga0157373_10000487 3300013100 Bacteria 31398
81 Ga0157373_10002091 3300013100 Bacteria 15131
82 Ga0157373_10003795 3300013100 Bacteria 11425
83 Ga0157373_10060933 3300013100 Bacteria 2673
84 Ga0157371_10000081 3300013102 Bacteria 151138
85 Ga0157371_10000133 3300013102 Bacteria 110113
86 Ga0157371_10000486 3300013102 Bacteria 48340
87 Ga0157371_10000779 3300013102 Bacteria 36655
88 Ga0157371_10000789 3300013102 Bacteria 36476
89 Ga0157371_10001175 3300013102 Bacteria 28108
90 Ga0157371_10004288 3300013102 Bacteria 12513
91 Ga0157370_10000303 3300013104 Bacteria 61868
92 Ga0157370_10000451 3300013104 Bacteria 51369
93 Ga0157370_10002044 3300013104 Bacteria 24782
94 Ga0157370_10003961 3300013104 Bacteria 17235
95 Ga0157370_10020372 3300013104 Bacteria 6625
96 Ga0157369_10000007 3300013105 Bacteria 402562
97 Ga0157369_10000494 3300013105 Bacteria 52196
98 Ga0157369_10035285 3300013105 Bacteria 5485
99 Ga0157374_10000079 3300013296 Bacteria 95883
100 Ga0163162_10000005 3300013306 Bacteria 447195
101 Ga0163162_10000035 3300013306 Bacteria 147102
102 Ga0163162_10001421 3300013306 Bacteria 22260
103 Ga0157372_10000042 3300013307 Bacteria 157651
104 Ga0157372_10000354 3300013307 Bacteria 50294
105 Ga0157372_10002722 3300013307 Bacteria 19119
106 Ga0157375_10000771 3300013308 Bacteria 28093
107 Ga0157380_10000001 3300014326 Bacteria 254890
108 Ga0182008_10000014 3300014497 Bacteria 263844
109 Ga0182008_10000039 3300014497 Bacteria 124930
110 Ga0182008_10000446 3300014497 Bacteria 31409
111 Ga0182008_10000869 3300014497 Bacteria 21005
112 Ga0182008_10002603 3300014497 Bacteria 11208
113 Ga0182008_10019873 3300014497 Bacteria 3462
114 Ga0182006_1000011 3300015261 Bacteria 408647
115 Ga0182006_1000220 3300015261 Bacteria 55777
116 Ga0182006_1000650 3300015261 Bacteria 24687
117 Ga0182006_1001616 3300015261 Bacteria 13326
118 Ga0182006_1004372 3300015261 Bacteria 6987
119 Ga0182007_10000007 3300015262 Bacteria 376596
120 Ga0182007_10001315 3300015262 Bacteria 13426
121 Ga0182007_10004722 3300015262 Bacteria 6129
122 Ga0183373_1001 3300015682 Bacteria 1410374
123 Ga0163161_10000260 3300017792 Bacteria 46554
124 Ga0163161_10000518 3300017792 Bacteria 31450
125 Ga0163161_10000783 3300017792 Bacteria 24993
126 Ga0163161_10001451 3300017792 Bacteria 17533
127 Ga0163161_10003503 3300017792 Bacteria 10984
128 Ga0163161_10032023 3300017792 Bacteria 3751
129 Ga0213872_10003111 3300021361 Bacteria 9325
130 Ga0207427_100210 3300025231 Bacteria 53314
131 Ga0209437_100021 3300025233 Bacteria 646400
132 Ga0209437_100119 3300025233 Bacteria 206549
133 Ga0207425_1000002 3300025245 Bacteria 1362590
134 Ga0209026_1000273 3300025250 Bacteria 61449
135 Ga0209129_1000002 3300025258 Bacteria 1359086
136 Ga0209233_1000035 3300025261 Bacteria 568478
137 Ga0209455_1004196 3300025272 Bacteria 4815
138 Ga0209675_1000032 3300025291 Bacteria 273013
139 Ga0209676_1000201 3300025292 Bacteria 133195
140 Ga0209025_1000004 3300025294 Bacteria 1361782
141 Ga0209758_1000006 3300025297 Bacteria 1359562
142 Ga0209050_1000203 3300025298 Bacteria 133156
143 Ga0207655_1000010 3300025728 Bacteria 649325
144 Ga0207655_1001186 3300025728 Bacteria 25280
145 Ga0207647_10000510 3300025904 Bacteria 30942
146 Ga0207647_10002531 3300025904 Bacteria 13846
147 Ga0207645_10000177 3300025907 Bacteria 51193
148 Ga0207705_10000068 3300025909 Bacteria 134316
149 Ga0207654_10007495 3300025911 Bacteria 5498
150 Ga0207654_10009272 3300025911 Bacteria 4994
151 Ga0207654_10024280 3300025911 Bacteria 3257
152 Ga0207695_10000179 3300025913 Bacteria 185564
153 Ga0207695_10007041 3300025913 Bacteria 14430
154 Ga0207671_10000960 3300025914 Bacteria 35779
155 Ga0207671_10005493 3300025914 Bacteria 11661
156 Ga0207671_10006958 3300025914 Bacteria 9947
157 Ga0207671_10008531 3300025914 Bacteria 8675
158 Ga0207671_10009607 3300025914 Bacteria 8064
159 Ga0207652_10002930 3300025921 Bacteria 14278
160 Ga0207706_10000044 3300025933 Bacteria 123576
161 Ga0207709_10000020 3300025935 Bacteria 392366
162 Ga0207709_10042087 3300025935 Bacteria 2745
163 Ga0207704_10000023 3300025938 Bacteria 142638
164 Ga0207667_10000197 3300025949 Bacteria 87987
165 Ga0207667_10002511 3300025949 Bacteria 22878
166 Ga0207667_10018698 3300025949 Bacteria 7764
167 Ga0207639_10024420 3300026041 Bacteria 4375
168 Ga0207702_10010662 3300026078 Bacteria 7678
169 Ga0207648_10000774 3300026089 Bacteria 36044
170 Ga0207683_10000934 3300026121 Bacteria 26876
171 Ga0207698_10011046 3300026142 Bacteria 5838
172 Ga0209281_1000396 3300027111 Bacteria 67930
173 Ga0268266_10000132 3300028379 Bacteria 145563
174 Ga0307517_10003919 3300028786 Bacteria 23073
175 Ga0307515_10001029 3300028794 Bacteria 63730
176 Ga0307515_10010864 3300028794 Bacteria 17373
177 Ga0307515_10034872 3300028794 Bacteria 8213
178 Ga0307515_10109181 3300028794 Bacteria 3252
179 Ga0316183_1131408 3300030742 Bacteria 29862
180 Ga0316181_1178700 3300030744 Bacteria 13560
181 Ga0307408_100000152 3300031548 Bacteria 77487
182 Ga0307408_100000333 3300031548 Bacteria 44985
183 Ga0307408_100001737 3300031548 Bacteria 15946
184 Ga0307408_100002451 3300031548 Bacteria 13012
185 Ga0307408_100003885 3300031548 Bacteria 10171
186 Ga0316576_10021933 3300031727 Bacteria 4427
187 Ga0316578_10000709 3300031728 Bacteria 12050
188 Ga0307405_10000001 3300031731 Bacteria 1731270
189 Ga0307405_10000044 3300031731 Bacteria 77117
190 Ga0316577_10000172 3300031733 Bacteria 20720
191 Ga0316577_10001434 3300031733 Bacteria 11267
192 Ga0307406_10000009 3300031901 Bacteria 119997
193 Ga0307407_10000025 3300031903 Bacteria 112811
194 Ga0307407_10001566 3300031903 Bacteria 8413
195 Ga0307412_10000012 3300031911 Bacteria 404180
196 Ga0307412_10000043 3300031911 Bacteria 166562
197 Ga0307412_10000266 3300031911 Bacteria 33662
198 Ga0307416_100000010 3300032002 Bacteria 320243
199 Ga0307416_100000068 3300032002 Bacteria 86974
200 Ga0307414_10000001 3300032004 Bacteria 1352954
201 Ga0307414_10000009 3300032004 Bacteria 359782
202 Ga0307414_10000780 3300032004 Bacteria 16282
203 Ga0307414_10013027 3300032004 Bacteria 4940
204 Ga0307411_10000005 3300032005 Bacteria 391311
205 Ga0307507_10000099 3300033179 Bacteria 139532
206 Ga0307510_10006258 3300033180 Bacteria 14207
207 Ga0316574_0006094 3300035398 Bacteria 6486
208 Ga0316584_0018097 3300036712 Bacteria 5080
209 Ga0395899_0000011 3300037312 Bacteria 521331
210 Ga0395899_0000084 3300037312 Bacteria 159161
211 Ga0395899_0003210 3300037312 Bacteria 12964
212 Ga0395900_0000314 3300037418 Bacteria 71758
213 Ga0395900_0001300 3300037418 Bacteria 30387
214 Ga0395898_0018762 3300037466 Bacteria 7050
215 Ga0395905_0000477 3300037471 Bacteria 55299
216 Ga0395905_0000757 3300037471 Bacteria 42574
217 Ga0395901_0005968 3300038443 Bacteria 12332
218 Ga0436361_0417016 3300039447 Bacteria 15796
219 Ga0439447_001511 3300041407 Bacteria 8512
220 Ga0439466_0000367 3300041411 Bacteria 17392
221 Ga0439445_0000039 3300042004 Bacteria 17900
222 Ga0439448_0001231 3300042005 Bacteria 6540
223 Ga0453683_0004426 3300044673 Bacteria 9969
224 Ga0466961_0016933 3300044693 Bacteria 4684
225 Ga0453684_0000792 3300044712 Bacteria 108377
226 Ga0453684_0004535 3300044712 Bacteria 29128
227 Ga0453684_0021401 3300044712 Bacteria 9663
228 Ga0453684_0033679 3300044712 Bacteria 7134
229 Ga0451576_0007962 3300045051 Bacteria 12535
230 Ga0466958_0029540 3300045836 Bacteria 3253
231 Ga0495627_000003 3300046453 Bacteria 704557
232 Ga0495650_0000144 3300046471 Bacteria 165957
233 Ga0495585_0000312 3300046492 Bacteria 48297
234 Ga0495585_0000348 3300046492 Bacteria 44925
235 Ga0495583_0021742 3300046506 Bacteria 3292
236 Ga0495606_0000926 3300046507 Bacteria 43259
237 Ga0495606_0004458 3300046507 Bacteria 13979
238 Ga0495610_0000001 3300046512 Bacteria 1620061
239 Ga0495610_0000503 3300046512 Bacteria 39937
240 Ga0495610_0001817 3300046512 Bacteria 18559
241 Ga0495610_0002375 3300046512 Bacteria 15891
242 Ga0495616_0000915 3300046513 Bacteria 21238
243 Ga0495616_0009552 3300046513 Bacteria 5663
244 Ga0495632_0002305 3300046519 Bacteria 14692
245 Ga0495644_0002551 3300046523 Bacteria 7246
246 Ga0495663_0000109 3300046525 Bacteria 34149
247 Ga0495654_0000001 3300046530 Bacteria 1513197
248 Ga0495609_0000460 3300046538 Bacteria 33189
249 Ga0495609_0005279 3300046538 Bacteria 6854
250 Ga0495609_0009926 3300046538 Bacteria 4586
251 Ga0495633_0000006 3300046558 Bacteria 326774
252 Ga0495633_0000008 3300046558 Bacteria 301830
253 Ga0495633_0001260 3300046558 Bacteria 20176
254 Ga0495668_0000086 3300046616 Bacteria 151960
255 Ga0495625_0000059 3300046660 Bacteria 180330
256 Ga0495625_0000371 3300046660 Bacteria 68809
257 Ga0495625_0002039 3300046660 Bacteria 22734
258 Ga0495625_0005177 3300046660 Bacteria 12030
259 Ga0495661_0005900 3300046665 Bacteria 8655
260 Ga0495661_0011405 3300046665 Bacteria 6033
261 Ga0495649_0000031 3300046694 Bacteria 151547
262 Ga0495683_0015240 3300047323 Bacteria 4002
263 Ga0495687_000601 3300047443 Bacteria 42037
264 Ga0495687_000783 3300047443 Bacteria 34231
265 Ga0495686_0000118 3300047472 Bacteria 165897
266 Ga0495686_0000581 3300047472 Bacteria 51820
267 Ga0495686_0001365 3300047472 Bacteria 27228
268 Ga0495686_0016930 3300047472 Bacteria 4925
269 Ga0495614_0016929 3300048089 Bacteria 3169
270 Ga0496115_0002406 3300048918 Bacteria 13427
271 Ga0496116_0000041 3300048919 Bacteria 343299
272 Ga0496116_0000695 3300048919 Bacteria 43598
273 Ga0496116_0001273 3300048919 Bacteria 29010
274 Ga0496117_0000050 3300048920 Bacteria 292727
275 Ga0496117_0000750 3300048920 Bacteria 51106
276 Ga0496118_0000044 3300048921 Bacteria 283524
277 Ga0496119_0000002 3300048922 Bacteria 738385
278 Ga0496122_0000188 3300048925 Bacteria 143808
279 Ga0496122_0000290 3300048925 Bacteria 111581
280 Ga0496122_0000658 3300048925 Bacteria 69587
281 Ga0496122_0002081 3300048925 Bacteria 29667
282 Ga0496122_0002721 3300048925 Bacteria 24530
283 Ga0496122_0004574 3300048925 Bacteria 17045
284 Ga0496123_0000856 3300048926 Bacteria 48564
285 Ga0496123_0005962 3300048926 Bacteria 12001
286 Ga0496123_0040482 3300048926 Bacteria 3244
287 Ga0496124_0009016 3300048927 Bacteria 10321
288 Ga0496124_0021542 3300048927 Bacteria 5937
289 Ga0496124_0040980 3300048927 Bacteria 4001
290 Ga0496125_0000036 3300048928 Bacteria 335814
291 Ga0496125_0000177 3300048928 Bacteria 140730
292 Ga0496125_0000349 3300048928 Bacteria 87610
293 Ga0496125_0011293 3300048928 Bacteria 8952
294 Ga0496125_0021856 3300048928 Bacteria 5954
295 Ga0496126_0000765 3300048929 Bacteria 58196
296 Ga0501249_000003 3300049679 Bacteria 242930
297 Ga0501241_000013 3300049758 Bacteria 104728
298 Ga0501266_000015 3300049763 Bacteria 177219
299 Ga0501269_000241 3300049766 Bacteria 16034
300 Ga0501280_002074 3300049776 Bacteria 3463
301 nmdc:mga0k408_170_c1 3300050493 Bacteria 5894
302 Ga0500635_0000274 3300053080 Bacteria 19596
303 Ga0500651_0000363 3300053093 Bacteria 25057
304 Ga0500641_0000030 3300053096 Bacteria 96500
305 Ga0500641_0000340 3300053096 Bacteria 17310
306 Ga0500618_000018 3300053125 Bacteria 163272
307 Ga0500658_0000008 3300053134 Bacteria 273324
308 Ga0500622_0000537 3300053156 Bacteria 35129
309 Ga0500624_000185 3300053157 Bacteria 24629

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035398 Ga0316574_0006094 Ga0316574_0006094_4011_6443 709
2 3300005547 Ga0070693_100000328 Ga0070693_10000032819 765
3 3300025935 Ga0207709_10042087 Ga0207709_100420871 784
4 3300013100 Ga0157373_10060933 Ga0157373_100609331 857
5 3300045836 Ga0466958_0029540 Ga0466958_0029540_593_3187 857
6 3300031728 Ga0316578_10000709 Ga0316578_100007093 881
7 3300031733 Ga0316577_10001434 Ga0316577_100014342 881
8 3300031733 Ga0316577_10000172 Ga0316577_1000017215 892
9 3300036712 Ga0316584_0018097 Ga0316584_0018097_1519_4467 892
10 3300044673 Ga0453683_0004426 Ga0453683_0004426_3989_6850 895
11 3300045051 Ga0451576_0007962 Ga0451576_0007962_7761_10598 897
12 3300044712 Ga0453684_0004535 Ga0453684_0004535_20017_22857 906
13 3300048089 Ga0495614_0016929 Ga0495614_0016929_54_2915 908
14 iso_pu_bacteria 2890804823 2890805307 910
15 3300031548 Ga0307408_100002451 Ga0307408_1000024513 911
16 3300031901 Ga0307406_10000009 Ga0307406_10000009107 911
17 3300031903 Ga0307407_10001566 Ga0307407_100015663 911
18 3300032004 Ga0307414_10000001 Ga0307414_10000001390 911
19 3300041411 Ga0439466_0000367 Ga0439466_0000367_6435_9230 911
20 3300049776 Ga0501280_002074 Ga0501280_002074_147_2942 911
21 3300005466 Ga0070685_10019643 Ga0070685_100196431 913
22 iso_pu_bacteria 2523533629 2524006069 913
23 3300006942 Ga0099824_1006455 Ga0099824_10064554 914
24 3300006948 Ga0099826_10002269 Ga0099826_100022693 914
25 3300017792 Ga0163161_10000260 Ga0163161_1000026012 914
26 iso_pu_bacteria 2585428095 2587866712 914
27 iso_pu_bacteria 2585428115 2587942978 914
28 3300009036 Ga0105244_10000003 Ga0105244_10000003176 915
29 3300025728 Ga0207655_1000010 Ga0207655_1000010373 915
30 3300031548 Ga0307408_100000152 Ga0307408_10000015256 915
31 iso_pu_bacteria 2582581278 2585143398 915
32 iso_pu_bacteria 2582581873 2585424803 915
33 iso_pu_bacteria 2585428045 2587679656 915
34 iso_pu_bacteria 2585428060 2587747950 915
35 iso_pu_bacteria 2585428061 2587750242 915
36 iso_pu_bacteria 2585428182 2588208413 915
37 iso_pu_bacteria 2585428183 2588213082 915
38 iso_pu_bacteria 2585428184 2588219675 915
39 iso_pu_bacteria 2585428185 2588224018 915
40 iso_pu_bacteria 2585428187 2588233534 915
41 iso_pu_bacteria 2588253712 2588446358 915
42 iso_pu_bacteria 2588254257 2590611603 915
43 iso_pu_bacteria 2728369107 2729203184 915
44 iso_pu_bacteria 2738541273 2738700657 915
45 iso_pu_bacteria 2738543014 2739254406 915
46 iso_pu_bacteria 2739367874 2740057540 915
47 iso_pu_bacteria 2751185877 2753672787 915
48 iso_pu_bacteria 2765235839 2765572489 915
49 iso_pu_bacteria 2772190705 2772605402 915
50 iso_pu_bacteria 2775506739 2775672980 915
51 iso_pu_bacteria 2816332188 2816872748 915
52 iso_pu_bacteria 2842083920 2842084120 915
53 iso_pu_bacteria 2871720351 2871722472 915
54 iso_pu_bacteria 2905999023 2906000878 915
55 iso_pu_bacteria 2919097161 2919099398 915
56 iso_pu_bacteria 2919399522 2919402820 915
57 iso_pu_bacteria 2945924605 2945927391 915
58 iso_pu_bacteria 2946019816 2946021320 915
59 iso_pu_bacteria 2977243572 2977246275 915
60 iso_pu_bacteria 2984572630 2984575908 915
61 iso_pu_bacteria 2984606641 2984609364 915
62 iso_pu_bacteria 2993372514 2993373553 915
63 iso_pu_bacteria 2993480792 2993484238 915
64 3300014326 Ga0157380_10000001 Ga0157380_10000001109 917
65 3300044712 Ga0453684_0021401 Ga0453684_0021401_2032_4797 917
66 3300005289 Ga0065704_10085240 Ga0065704_100852401 918
67 3300013100 Ga0157373_10000036 Ga0157373_1000003655 918
68 3300014497 Ga0182008_10000039 Ga0182008_1000003945 918
69 3300046453 Ga0495627_000003 Ga0495627_000003_440839_443625 918
70 3300046525 Ga0495663_0000109 Ga0495663_0000109_18834_21620 918
71 3300046530 Ga0495654_0000001 Ga0495654_0000001_676048_678834 918
72 3300046538 Ga0495609_0000460 Ga0495609_0000460_20297_23083 918
73 3300046558 Ga0495633_0000008 Ga0495633_0000008_107116_109902 918
74 3300048918 Ga0496115_0002406 Ga0496115_0002406_705_3494 918
75 3300048928 Ga0496125_0000177 Ga0496125_0000177_96565_99354 918
76 3300005289 Ga0065704_10071762 Ga0065704_100717626 919
77 3300005289 Ga0065704_10075398 Ga0065704_100753982 919
78 3300005289 Ga0065704_10076512 Ga0065704_100765124 919
79 3300005337 Ga0070682_100000507 Ga0070682_10000050720 919
80 3300005535 Ga0070684_100026921 Ga0070684_1000269212 919
81 3300009036 Ga0105244_10006831 Ga0105244_100068315 919
82 3300009148 Ga0105243_10006502 Ga0105243_100065023 919
83 3300013102 Ga0157371_10000081 Ga0157371_1000008110 919
84 3300013104 Ga0157370_10003961 Ga0157370_100039612 919
85 3300013308 Ga0157375_10000771 Ga0157375_1000077126 919
86 3300015261 Ga0182006_1000011 Ga0182006_1000011180 919
87 3300017792 Ga0163161_10001451 Ga0163161_100014512 919
88 3300025291 Ga0209675_1000032 Ga0209675_1000032167 919
89 3300025728 Ga0207655_1001186 Ga0207655_10011862 919
90 3300031911 Ga0307412_10000012 Ga0307412_10000012274 919
91 3300031911 Ga0307412_10000266 Ga0307412_1000026628 919
92 3300032002 Ga0307416_100000010 Ga0307416_100000010256 919
93 3300032004 Ga0307414_10000009 Ga0307414_10000009217 919
94 3300037312 Ga0395899_0000084 Ga0395899_0000084_68536_71355 919
95 3300042004 Ga0439445_0000039 Ga0439445_0000039_2000_4792 919
96 3300046512 Ga0495610_0000001 Ga0495610_0000001_1385523_1388321 919
97 3300046519 Ga0495632_0002305 Ga0495632_0002305_11541_14333 919
98 3300046660 Ga0495625_0005177 Ga0495625_0005177_7575_10367 919
99 3300047472 Ga0495686_0000118 Ga0495686_0000118_67913_70705 919
100 3300048919 Ga0496116_0001273 Ga0496116_0001273_24508_27300 919
101 3300048920 Ga0496117_0000050 Ga0496117_0000050_122091_124883 919
102 3300048921 Ga0496118_0000044 Ga0496118_0000044_167872_170664 919
103 3300048922 Ga0496119_0000002 Ga0496119_0000002_170050_172842 919
104 3300048925 Ga0496122_0000188 Ga0496122_0000188_127156_130053 919
105 3300048925 Ga0496122_0000290 Ga0496122_0000290_88878_91685 919
106 3300048925 Ga0496122_0000658 Ga0496122_0000658_17173_19965 919
107 3300048925 Ga0496122_0002081 Ga0496122_0002081_24797_27601 919
108 3300048925 Ga0496122_0002721 Ga0496122_0002721_16919_19711 919
109 3300048926 Ga0496123_0000856 Ga0496123_0000856_43230_46022 919
110 3300048926 Ga0496123_0040482 Ga0496123_0040482_297_3194 919
111 3300048927 Ga0496124_0009016 Ga0496124_0009016_288_3080 919
112 3300048928 Ga0496125_0000349 Ga0496125_0000349_76090_78894 919
113 3300048928 Ga0496125_0011293 Ga0496125_0011293_1797_4589 919
114 3300048928 Ga0496125_0021856 Ga0496125_0021856_698_3490 919
115 3300048929 Ga0496126_0000765 Ga0496126_0000765_13794_16601 919
116 3300049758 Ga0501241_000013 Ga0501241_000013_126_2918 919
117 3300049766 Ga0501269_000241 Ga0501269_000241_7951_10743 919
118 iso_pu_bacteria 2511231000 2511234805 919
119 iso_pu_bacteria 2519899754 2520878461 919
120 iso_pu_bacteria 2582581281 2585158563 919
121 iso_pu_bacteria 2582581282 2585162799 919
122 iso_pu_bacteria 2588254255 2590600956 919
123 iso_pu_bacteria 2643221600 2644011787 919
124 iso_pu_bacteria 2643221667 2644370173 919
125 iso_pu_bacteria 2643221716 2644641983 919
126 iso_pu_bacteria 2738541279 2738736173 919
127 iso_pu_bacteria 2738541285 2738768616 919
128 iso_pu_bacteria 2738543007 2739217755 919
129 iso_pu_bacteria 2739367857 2740003396 919
130 iso_pu_bacteria 2739367858 2740008213 919
131 iso_pu_bacteria 2816332280 2817415481 919
132 iso_pu_bacteria 2857613821 2857614255 919
133 iso_pu_bacteria 2857618242 2857619412 919
134 iso_pu_bacteria 2881359912 2881362312 919
135 iso_pu_bacteria 2889290771 2889291853 919
136 iso_pu_bacteria 2903895155 2903898257 919
137 iso_pu_bacteria 2904419702 2904424080 919
138 iso_pu_bacteria 2904555929 2904556318 919
139 iso_pu_bacteria 2919191525 2919193292 919
140 iso_pu_bacteria 2929150217 2929152721 919
141 iso_pu_bacteria 2958458903 2958462507 919
142 iso_pu_bacteria 8054307821 8054312062 919
143 iso_pu_bacteria 8055592153 8055594468 919
144 iso_pu_bacteria 2919683626 2919686805 920
145 iso_pu_bacteria 2965320100 2965320305 920
146 iso_pu_bacteria 2881247448 2881249504 921
147 iso_pu_bacteria 2919509842 2919511252 921
148 3300005288 Ga0065714_10003658 Ga0065714_100036581 922
149 3300005288 Ga0065714_10004483 Ga0065714_100044833 922
150 3300006946 Ga0079104_1000271 Ga0079104_100027122 922
151 3300013100 Ga0157373_10000012 Ga0157373_1000001267 922
152 3300013102 Ga0157371_10004288 Ga0157371_100042884 922
153 3300013104 Ga0157370_10000451 Ga0157370_1000045111 922
154 3300013104 Ga0157370_10002044 Ga0157370_1000204410 922
155 3300027111 Ga0209281_1000396 Ga0209281_100039620 922
156 3300032005 Ga0307411_10000005 Ga0307411_10000005256 922
157 3300041407 Ga0439447_001511 Ga0439447_001511_3680_6475 922
158 3300048919 Ga0496116_0000041 Ga0496116_0000041_279809_282604 922
159 3300048927 Ga0496124_0021542 Ga0496124_0021542_3122_5917 922
160 3300048928 Ga0496125_0000036 Ga0496125_0000036_39682_42477 922
161 3300049679 Ga0501249_000003 Ga0501249_000003_139789_142584 922
162 3300049763 Ga0501266_000015 Ga0501266_000015_157740_160535 922
163 3300053096 Ga0500641_0000030 Ga0500641_0000030_21231_24026 922
164 3300053134 Ga0500658_0000008 Ga0500658_0000008_142299_145094 922
165 iso_pu_bacteria 2643221725 2644685579 922
166 iso_pu_bacteria 2802428842 2802653390 922
167 iso_pu_bacteria 2977268062 2977269421 922
168 iso_pu_bacteria 8055419101 8055421118 922
169 3300031731 Ga0307405_10000001 Ga0307405_100000011373 923
170 3300053096 Ga0500641_0000340 Ga0500641_0000340_1052_3850 923
171 iso_pu_bacteria 2513020052 2513234393 923
172 iso_pu_bacteria 2919692658 2919693591 923
173 iso_pu_bacteria 8056440228 8056444570 923
174 3300031727 Ga0316576_10021933 Ga0316576_100219333 924
175 iso_pu_bacteria 8055588893 8055592120 924
176 3300044712 Ga0453684_0000792 Ga0453684_0000792_64195_67014 926
177 iso_pu_bacteria 2842903701 2842908109 926
178 iso_pu_bacteria 2884634485 2884637688 926
179 3300044712 Ga0453684_0033679 Ga0453684_0033679_4226_7051 927
180 iso_pu_bacteria 2884933994 2884935607 927
181 iso_pu_bacteria 2890737413 2890740255 927
182 iso_pu_bacteria 2896344016 2896346704 927
183 iso_pu_bacteria 2599185184 2599481686 928
184 iso_pu_bacteria 2721755487 2722725728 928
185 iso_pu_bacteria 2738543023 2739305269 928
186 iso_pu_bacteria 2852623160 2852625870 928
187 iso_pu_bacteria 2896317667 2896320421 928
188 iso_pu_bacteria 2898713307 2898714432 928
189 iso_pu_bacteria 2904780799 2904782488 928
190 iso_pu_bacteria 2919177583 2919178346 928
191 iso_pu_bacteria 2919437846 2919440497 928
192 iso_pu_bacteria 2928078545 2928082171 928
193 iso_pu_bacteria 2928147474 2928149253 928
194 iso_pu_bacteria 2932082852 2932087687 928
195 iso_pu_bacteria 2977232053 2977235334 928
196 iso_pu_bacteria 2738541283 2738756692 929
197 iso_pu_bacteria 2738541284 2738764236 929
198 iso_pu_bacteria 2775506987 2776611941 929
199 iso_pu_bacteria 2852627209 2852630918 929
200 iso_pu_bacteria 2902048731 2902050352 929
201 iso_pu_bacteria 2911138879 2911139444 929
202 iso_pu_bacteria 2919186247 2919190536 929
203 iso_pu_bacteria 2939664404 2939668817 929
204 3300005563 Ga0068855_100000522 Ga0068855_10000052238 930
205 3300005577 Ga0068857_100004876 Ga0068857_1000048767 930
206 3300009093 Ga0105240_10019508 Ga0105240_100195089 930
207 3300013100 Ga0157373_10002091 Ga0157373_1000209114 930
208 3300013102 Ga0157371_10000789 Ga0157371_1000078921 930
209 3300013307 Ga0157372_10000354 Ga0157372_1000035421 930
210 3300025949 Ga0207667_10000197 Ga0207667_1000019741 930
211 3300030742 Ga0316183_1131408 Ga0316183_11314083 930
212 3300030744 Ga0316181_1178700 Ga0316181_11787003 930
213 iso_pu_bacteria 2585427687 2586210597 930
214 iso_pu_bacteria 2738541302 2738856403 930
215 iso_pu_bacteria 2739367651 2739589234 930
216 iso_pu_bacteria 2739367656 2739616171 930
217 iso_pu_bacteria 2739367663 2739646824 930
218 iso_pu_bacteria 2842722452 2842725563 930
219 iso_pu_bacteria 2842909656 2842914707 930
220 iso_pu_bacteria 2849281842 2849283259 930
221 iso_pu_bacteria 2857627736 2857631266 930
222 iso_pu_bacteria 2904445276 2904447018 930
223 iso_pu_bacteria 2945997725 2946002580 930
224 iso_pu_bacteria 2954016120 2954019428 930
225 3300005366 Ga0070659_100034141 Ga0070659_1000341412 931
226 3300009093 Ga0105240_10004108 Ga0105240_100041086 931
227 3300009174 Ga0105241_10017058 Ga0105241_100170582 931
228 3300013306 Ga0163162_10001421 Ga0163162_100014213 931
229 3300025904 Ga0207647_10002531 Ga0207647_100025312 931
230 3300025911 Ga0207654_10024280 Ga0207654_100242801 931
231 3300001990 JGI24737J22298_10001214 JGI24737J22298_100012149 932
232 3300002067 JGI24735J21928_10000015 JGI24735J21928_1000001585 932
233 3300003320 rootH2_10011116 rootH2_1001111641 932
234 3300005288 Ga0065714_10003459 Ga0065714_100034593 932
235 3300005328 Ga0070676_10001756 Ga0070676_100017561 932
236 3300005339 Ga0070660_100015981 Ga0070660_1000159814 932
237 3300005364 Ga0070673_100005959 Ga0070673_1000059594 932
238 3300005366 Ga0070659_100001388 Ga0070659_1000013889 932
239 3300005456 Ga0070678_100005395 Ga0070678_1000053955 932
240 3300005457 Ga0070662_100000020 Ga0070662_10000002032 932
241 3300005458 Ga0070681_10008323 Ga0070681_100083239 932
242 3300005459 Ga0068867_100000492 Ga0068867_10000049224 932
243 3300005530 Ga0070679_100018533 Ga0070679_1000185331 932
244 3300005539 Ga0068853_100020134 Ga0068853_1000201342 932
245 3300005548 Ga0070665_100000125 Ga0070665_10000012529 932
246 3300005563 Ga0068855_100000246 Ga0068855_1000002462 932
247 3300005563 Ga0068855_100008142 Ga0068855_10000814211 932
248 3300005614 Ga0068856_100000021 Ga0068856_10000002134 932
249 3300005614 Ga0068856_100000690 Ga0068856_10000069014 932
250 3300005616 Ga0068852_100003213 Ga0068852_1000032133 932
251 3300006237 Ga0097621_100000087 Ga0097621_1000000874 932
252 3300006358 Ga0068871_100000316 Ga0068871_1000003168 932
253 3300006881 Ga0068865_100000037 Ga0068865_10000003722 932
254 3300009093 Ga0105240_10001151 Ga0105240_100011514 932
255 3300009093 Ga0105240_10003925 Ga0105240_100039258 932
256 3300009148 Ga0105243_10000016 Ga0105243_1000001640 932
257 3300009174 Ga0105241_10001158 Ga0105241_1000115818 932
258 3300009174 Ga0105241_10014600 Ga0105241_100146005 932
259 3300010375 Ga0105239_10000077 Ga0105239_1000007784 932
260 3300013296 Ga0157374_10000079 Ga0157374_1000007979 932
261 3300013306 Ga0163162_10000005 Ga0163162_10000005107 932
262 3300013307 Ga0157372_10002722 Ga0157372_100027226 932
263 3300021361 Ga0213872_10003111 Ga0213872_100031114 932
264 3300025250 Ga0209026_1000273 Ga0209026_100027322 932
265 3300025272 Ga0209455_1004196 Ga0209455_10041962 932
266 3300025904 Ga0207647_10000510 Ga0207647_1000051027 932
267 3300025907 Ga0207645_10000177 Ga0207645_1000017710 932
268 3300025911 Ga0207654_10007495 Ga0207654_100074954 932
269 3300025911 Ga0207654_10009272 Ga0207654_100092723 932
270 3300025913 Ga0207695_10007041 Ga0207695_100070414 932
271 3300025914 Ga0207671_10009607 Ga0207671_100096076 932
272 3300025921 Ga0207652_10002930 Ga0207652_1000293011 932
273 3300025933 Ga0207706_10000044 Ga0207706_1000004454 932
274 3300025935 Ga0207709_10000020 Ga0207709_10000020155 932
275 3300025938 Ga0207704_10000023 Ga0207704_1000002349 932
276 3300025949 Ga0207667_10002511 Ga0207667_1000251115 932
277 3300025949 Ga0207667_10018698 Ga0207667_100186986 932
278 3300026041 Ga0207639_10024420 Ga0207639_100244203 932
279 3300026078 Ga0207702_10010662 Ga0207702_100106626 932
280 3300026089 Ga0207648_10000774 Ga0207648_100007743 932
281 3300026121 Ga0207683_10000934 Ga0207683_100009349 932
282 3300026142 Ga0207698_10011046 Ga0207698_100110463 932
283 3300028379 Ga0268266_10000132 Ga0268266_1000013223 932
284 3300032004 Ga0307414_10000780 Ga0307414_100007808 932
285 3300037312 Ga0395899_0003210 Ga0395899_0003210_7198_10128 932
286 3300037418 Ga0395900_0000314 Ga0395900_0000314_56536_59442 932
287 3300037418 Ga0395900_0001300 Ga0395900_0001300_3368_6298 932
288 3300037466 Ga0395898_0018762 Ga0395898_0018762_674_3604 932
289 3300037471 Ga0395905_0000757 Ga0395905_0000757_38300_41230 932
290 3300039447 Ga0436361_0417016 Ga0436361_0417016_6944_9928 932
291 3300042005 Ga0439448_0001231 Ga0439448_0001231_1735_4647 932
292 3300046513 Ga0495616_0009552 Ga0495616_0009552_2605_5511 932
293 3300046665 Ga0495661_0005900 Ga0495661_0005900_3079_6030 932
294 3300047443 Ga0495687_000601 Ga0495687_000601_14564_17479 932
295 3300047443 Ga0495687_000783 Ga0495687_000783_11042_13954 932
296 3300047472 Ga0495686_0001365 Ga0495686_0001365_17042_20044 932
297 3300047472 Ga0495686_0016930 Ga0495686_0016930_1340_4228 932
298 3300048919 Ga0496116_0000695 Ga0496116_0000695_1797_4598 932
299 3300048920 Ga0496117_0000750 Ga0496117_0000750_10581_13382 932
300 3300048926 Ga0496123_0005962 Ga0496123_0005962_7190_9991 932
301 3300048927 Ga0496124_0040980 Ga0496124_0040980_84_2885 932
302 3300053080 Ga0500635_0000274 Ga0500635_0000274_9688_12543 932
303 2162886007 SwRhRL2b_contig_2422272 SwRhRL2b_0806.00006970 933
304 2162886007 SwRhRL2b_contig_509673 SwRhRL2b_0883.00004470 933
305 3300002737 JGI25162J39368_1000016 JGI25162J39368_1000016144 933
306 3300002772 JGI25164J39214_1000962 JGI25164J39214_10009622 933
307 3300002773 JGI25152J39213_1000537 JGI25152J39213_100053716 933
308 3300002774 JGI25150J39212_1000001 JGI25150J39212_100000126 933
309 3300003187 JGI25151J46595_10000001 JGI25151J46595_10000001766 933
310 3300003214 JGI25165J46597_1000728 JGI25165J46597_100072821 933
311 3300003215 JGI25153J46596_10000001 JGI25153J46596_10000001655 933
312 3300003781 Ga0055536_1000038 Ga0055536_100003837 933
313 3300003791 Ga0055530_10000250 Ga0055530_1000025015 933
314 3300005288 Ga0065714_10002656 Ga0065714_1000265610 933
315 3300005288 Ga0065714_10002719 Ga0065714_100027191 933
316 3300005288 Ga0065714_10003783 Ga0065714_100037832 933
317 3300005288 Ga0065714_10065255 Ga0065714_100652559 933
318 3300005289 Ga0065704_10070251 Ga0065704_100702517 933
319 3300005289 Ga0065704_10089113 Ga0065704_100891131 933
320 3300005327 Ga0070658_10000041 Ga0070658_10000041110 933
321 3300005455 Ga0070663_100010142 Ga0070663_1000101423 933
322 3300009093 Ga0105240_10000128 Ga0105240_1000012824 933
323 3300009545 Ga0105237_10001477 Ga0105237_1000147723 933
324 3300009545 Ga0105237_10002031 Ga0105237_100020318 933
325 3300010375 Ga0105239_10000115 Ga0105239_1000011591 933
326 3300010375 Ga0105239_10001575 Ga0105239_100015757 933
327 3300010375 Ga0105239_10002353 Ga0105239_1000235314 933
328 3300010375 Ga0105239_10062091 Ga0105239_100620911 933
329 3300013100 Ga0157373_10000487 Ga0157373_1000048715 933
330 3300013100 Ga0157373_10003795 Ga0157373_100037957 933
331 3300013102 Ga0157371_10000133 Ga0157371_1000013310 933
332 3300013102 Ga0157371_10000486 Ga0157371_100004867 933
333 3300013102 Ga0157371_10000779 Ga0157371_1000077914 933
334 3300013102 Ga0157371_10001175 Ga0157371_100011757 933
335 3300013104 Ga0157370_10000303 Ga0157370_1000030311 933
336 3300013104 Ga0157370_10020372 Ga0157370_100203723 933
337 3300013105 Ga0157369_10000007 Ga0157369_10000007258 933
338 3300013105 Ga0157369_10000494 Ga0157369_1000049451 933
339 3300013105 Ga0157369_10035285 Ga0157369_100352854 933
340 3300013306 Ga0163162_10000035 Ga0163162_1000003577 933
341 3300013307 Ga0157372_10000042 Ga0157372_1000004237 933
342 3300014497 Ga0182008_10000014 Ga0182008_10000014196 933
343 3300014497 Ga0182008_10000446 Ga0182008_1000044611 933
344 3300014497 Ga0182008_10000869 Ga0182008_1000086911 933
345 3300014497 Ga0182008_10002603 Ga0182008_100026032 933
346 3300014497 Ga0182008_10019873 Ga0182008_100198732 933
347 3300015261 Ga0182006_1000220 Ga0182006_100022035 933
348 3300015261 Ga0182006_1000650 Ga0182006_10006504 933
349 3300015261 Ga0182006_1001616 Ga0182006_10016167 933
350 3300015261 Ga0182006_1004372 Ga0182006_10043725 933
351 3300015262 Ga0182007_10000007 Ga0182007_10000007125 933
352 3300015262 Ga0182007_10001315 Ga0182007_100013154 933
353 3300015262 Ga0182007_10004722 Ga0182007_100047224 933
354 3300015682 Ga0183373_1001 Ga0183373_100196 933
355 3300017792 Ga0163161_10000518 Ga0163161_1000051819 933
356 3300017792 Ga0163161_10000783 Ga0163161_1000078313 933
357 3300017792 Ga0163161_10003503 Ga0163161_100035038 933
358 3300017792 Ga0163161_10032023 Ga0163161_100320231 933
359 3300025231 Ga0207427_100210 Ga0207427_10021045 933
360 3300025233 Ga0209437_100021 Ga0209437_100021630 933
361 3300025233 Ga0209437_100119 Ga0209437_10011961 933
362 3300025245 Ga0207425_1000002 Ga0207425_10000021128 933
363 3300025258 Ga0209129_1000002 Ga0209129_10000021128 933
364 3300025261 Ga0209233_1000035 Ga0209233_10000357 933
365 3300025292 Ga0209676_1000201 Ga0209676_100020168 933
366 3300025294 Ga0209025_1000004 Ga0209025_100000464 933
367 3300025297 Ga0209758_1000006 Ga0209758_100000664 933
368 3300025298 Ga0209050_1000203 Ga0209050_100020368 933
369 3300025909 Ga0207705_10000068 Ga0207705_1000006814 933
370 3300025913 Ga0207695_10000179 Ga0207695_10000179157 933
371 3300025914 Ga0207671_10000960 Ga0207671_1000096023 933
372 3300025914 Ga0207671_10005493 Ga0207671_100054936 933
373 3300025914 Ga0207671_10006958 Ga0207671_100069588 933
374 3300025914 Ga0207671_10008531 Ga0207671_100085312 933
375 3300028786 Ga0307517_10003919 Ga0307517_1000391911 933
376 3300028794 Ga0307515_10001029 Ga0307515_1000102964 933
377 3300028794 Ga0307515_10010864 Ga0307515_100108643 933
378 3300028794 Ga0307515_10034872 Ga0307515_100348724 933
379 3300028794 Ga0307515_10109181 Ga0307515_101091811 933
380 3300031548 Ga0307408_100000333 Ga0307408_10000033338 933
381 3300031548 Ga0307408_100001737 Ga0307408_1000017374 933
382 3300031548 Ga0307408_100003885 Ga0307408_1000038854 933
383 3300031731 Ga0307405_10000044 Ga0307405_1000004413 933
384 3300031903 Ga0307407_10000025 Ga0307407_1000002572 933
385 3300031911 Ga0307412_10000043 Ga0307412_1000004314 933
386 3300032002 Ga0307416_100000068 Ga0307416_10000006858 933
387 3300032004 Ga0307414_10013027 Ga0307414_100130271 933
388 3300033179 Ga0307507_10000099 Ga0307507_10000099109 933
389 3300033180 Ga0307510_10006258 Ga0307510_1000625813 933
390 3300037312 Ga0395899_0000011 Ga0395899_0000011_368773_371625 933
391 3300037471 Ga0395905_0000477 Ga0395905_0000477_11766_14699 933
392 3300038443 Ga0395901_0005968 Ga0395901_0005968_3537_6470 933
393 3300044693 Ga0466961_0016933 Ga0466961_0016933_382_3204 933
394 3300046471 Ga0495650_0000144 Ga0495650_0000144_34247_37141 933
395 3300046492 Ga0495585_0000312 Ga0495585_0000312_10460_13414 933
396 3300046492 Ga0495585_0000348 Ga0495585_0000348_13515_16442 933
397 3300046506 Ga0495583_0021742 Ga0495583_0021742_210_3104 933
398 3300046507 Ga0495606_0000926 Ga0495606_0000926_3257_6151 933
399 3300046507 Ga0495606_0004458 Ga0495606_0004458_4116_7079 933
400 3300046512 Ga0495610_0000503 Ga0495610_0000503_27929_30742 933
401 3300046512 Ga0495610_0001817 Ga0495610_0001817_3181_6075 933
402 3300046512 Ga0495610_0002375 Ga0495610_0002375_1971_4784 933
403 3300046513 Ga0495616_0000915 Ga0495616_0000915_13324_16218 933
404 3300046523 Ga0495644_0002551 Ga0495644_0002551_4051_6921 933
405 3300046538 Ga0495609_0005279 Ga0495609_0005279_2611_5565 933
406 3300046538 Ga0495609_0009926 Ga0495609_0009926_1673_4492 933
407 3300046558 Ga0495633_0000006 Ga0495633_0000006_52871_55825 933
408 3300046558 Ga0495633_0001260 Ga0495633_0001260_1767_4661 933
409 3300046616 Ga0495668_0000086 Ga0495668_0000086_58371_61331 933
410 3300046660 Ga0495625_0000059 Ga0495625_0000059_141323_144217 933
411 3300046660 Ga0495625_0000371 Ga0495625_0000371_2543_5497 933
412 3300046660 Ga0495625_0002039 Ga0495625_0002039_2942_5911 933
413 3300046665 Ga0495661_0011405 Ga0495661_0011405_1363_4257 933
414 3300046694 Ga0495649_0000031 Ga0495649_0000031_112548_115442 933
415 3300047323 Ga0495683_0015240 Ga0495683_0015240_85_3027 933
416 3300047472 Ga0495686_0000581 Ga0495686_0000581_625_3543 933
417 3300048925 Ga0496122_0004574 Ga0496122_0004574_13215_16016 933
418 3300050493 nmdc:mga0k408_170_c1 nmdc:mga0k408_170_c1_1286_4255 933
419 3300053093 Ga0500651_0000363 Ga0500651_0000363_4511_7312 933
420 3300053125 Ga0500618_000018 Ga0500618_000018_47820_50741 933
421 3300053156 Ga0500622_0000537 Ga0500622_0000537_434_3382 933
422 3300053157 Ga0500624_000185 Ga0500624_000185_21469_24381 933
423 iso_pu_bacteria 2818991437 2819546855 933

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF17760

UvrA_inter

UvrA interaction domain

190

260

0.91

PF17755

UvrA_DNA-bind

UvrA DNA-binding domain

388

473

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
6n9l-assembly1.cif.gz_A crystal structure of t. maritima uvra d117-399 with adp 0.9396 12 930
6n9l-assembly1.cif.gz_A crystal structure of t. maritima uvra d117-399 with adp 0.9337 12 930
7sh1-assembly1.cif.gz_B-2 class ii uvra protein - ecm16 0.922 8 932
7sh1-assembly1.cif.gz_A class ii uvra protein - ecm16 0.9171 8 932
7sh1-assembly1.cif.gz_B-2 class ii uvra protein - ecm16 0.9135 8 932
ID Description Score Start End Superfamily
2r6fB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.975 13 579 3.40.50.300
2r6fB01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9595 13 579 3.40.50.300
2ygrD06 Mainly Alpha;Up-down Bundle;ABC transporter ATPase like fold;ABC transporter ATPase 0.9397 683 821 1.20.1580.10
2r6fB06 Mainly Alpha;Up-down Bundle;ABC transporter ATPase like fold;ABC transporter ATPase 0.937 685 821 1.20.1580.10
2ygrD06 Mainly Alpha;Up-down Bundle;ABC transporter ATPase like fold;ABC transporter ATPase 0.9333 683 821 1.20.1580.10
ID Description Score Start End GO Terms
AF-A0A349LIU2-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.984 845 932 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
AF-A0A1C4RUJ1-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.9703 703 933 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
GO:0016887
AF-A0A7C0XV46-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.9676 424 932 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006289
GO:0009380
GO:0016887
GO:0046872
AF-X1A4B2-F1-model_v4 UvrA DNA-binding domain-containing protein 0.9621 434 598 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
AF-A0A1C4RUJ1-F1-model_v4 UvrABC system protein A (Excinuclease ABC subunit A) 0.9621 703 933 GO:0003677
GO:0004518
GO:0005524
GO:0005737
GO:0006281
GO:0016887

Feature Viewer

pLDDT pTM Quality
86.72 0.75 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map