F433671

General Info

Members Datasets Scaffolds Average Seq Length
397 216 355 275

Family's Representative Sequence

Representative Sequence 3300003316|rootH1_10024829|rootH1_1002482926
Length 309
Sequence MTVNRLNPKLQVKITLFIGGNPVEFNGKKIKMNYYELFFTTITTEDYQQDLLINALGEIGFDTFEELELGFKAYIPEDVFDQQALDEQLLPYKDLFTFSYEVNLIPQKNWNEVWESNFEPIEIGDKIYVRATFHEPKPEFDYEIVIDPKMAFGTGHHQTTAMMLALMLENEFAGKKVLDMGCGTGILAIMAAKLGAGDITAIDYDQVCYESTIENSALNNVGNIKPLCGSKEVIPDEQYDIILANINRNILLDQMQRYAEVLKTDGEIYFSGFYESPDLDIITDEARKYGLKYITHKKDKEWVAAKFIK

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
5 2738541283 Pedobacter sp. OK701 Isolate Unclassified
6 2738541284 Pedobacter sp. YR016 Isolate Unclassified
7 2738541302 Pedobacter sp. CF074 Isolate Unclassified
8 2738543023 Pedobacter sp. OK628 Isolate Unclassified
9 2739367651 Pedobacter sp. OK291 Isolate Unclassified
10 2739367656 Pedobacter sp. CF523 Isolate Unclassified
11 2739367663 Pedobacter sp. YR510 Isolate Unclassified
12 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
13 2818991437 Pedobacter terrae 518 Isolate Unclassified
14 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
15 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
16 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
17 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
18 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
19 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
20 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
21 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
22 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
23 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
24 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
25 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
26 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
27 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
28 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
29 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
30 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
31 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
32 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
33 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
34 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
35 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
36 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
37 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
38 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
39 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
40 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
41 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
42 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
43 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
44 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
45 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
46 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
47 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
48 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
49 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
50 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
51 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
52 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
53 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
54 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
55 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
56 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
57 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
58 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
59 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
60 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
61 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
62 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
63 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
64 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
65 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
66 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
67 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
68 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
69 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
70 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
71 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
72 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
73 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
74 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
75 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
76 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
77 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
78 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
79 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
80 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
81 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
82 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
83 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
84 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
85 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
86 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
87 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
88 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
89 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
90 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
91 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
92 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
93 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
94 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
95 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
96 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
97 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
98 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
99 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
100 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
101 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
102 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
103 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
104 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
105 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
106 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
107 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
108 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
109 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
110 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
111 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
112 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
113 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
114 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
115 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
116 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
117 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
118 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
119 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
122 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
123 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
148 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
149 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
150 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
151 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
152 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
153 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
154 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
155 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
156 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
157 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
158 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
159 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
160 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
161 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
162 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
163 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
164 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
165 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
166 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
167 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
168 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
169 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
170 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
171 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
172 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
173 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
174 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
175 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
176 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
177 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
178 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
179 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
180 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
181 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
182 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
183 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
184 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
185 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
186 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
187 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
188 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
189 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
190 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
191 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
192 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
193 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
194 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
195 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
196 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
197 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
198 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
199 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
200 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
201 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
202 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
203 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
204 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
205 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
206 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
207 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
208 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
209 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
210 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
211 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
212 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
213 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
214 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
215 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
216 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 89.42
Metatranscriptomes 0
Isolates 10.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.32
Nodule 0
Rhizoplane 0.5
Rhizosphere 79.35
Stem 0
Stem Tuber 0
Unclassified 10.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1587187 2162886007 Bacteria 9294
2 SwRhRL2b_contig_2669455 2162886007 Bacteria 1854
3 JGI24736J21556_1016942 3300001904 Bacteria 1157
4 JGI24740J21852_10011425 3300001979 Bacteria 3382
5 JGI24739J22299_10009508 3300001989 Bacteria 3622
6 JGI24737J22298_10000823 3300001990 Bacteria 11028
7 JGI24737J22298_10029473 3300001990 Bacteria 1721
8 JGI24735J21928_10000001 3300002067 Bacteria 650042
9 JGI24744J21845_10005615 3300002077 Bacteria 2598
10 JGI25162J39368_1000011 3300002737 Bacteria 379156
11 JGI25162J39368_1000733 3300002737 Bacteria 22513
12 JGI25157J39369_1009348 3300002741 Bacteria 1323
13 JGI25152J39213_1001701 3300002773 Bacteria 9036
14 JGI25150J39212_1000030 3300002774 Bacteria 101822
15 JGI25151J46595_10000129 3300003187 Bacteria 101822
16 JGI25165J46597_1001509 3300003214 Bacteria 11814
17 JGI25153J46596_10000096 3300003215 Bacteria 101822
18 rootH1_10024829 3300003316 Bacteria 25564
19 rootH1_10034112 3300003316 Bacteria 3455
20 rootH2_10006566 3300003320 Bacteria 99379
21 rootH2_10173610 3300003320 Bacteria 3293
22 rootL2_10076109 3300003322 Bacteria 2618
23 rootH1_10031035 3300003323 Bacteria 9255
24 rootH1_10096670 3300003323 Bacteria 4894
25 rootH1_10100595 3300003323 Bacteria 1570
26 rootH1_10192830 3300003323 Bacteria 5284
27 rootH1_10208522 3300003323 Bacteria 2084
28 Ga0055536_1000086 3300003781 Bacteria 80100
29 Ga0055530_10001976 3300003791 Bacteria 13939
30 Ga0065714_10004765 3300005288 Bacteria 7547
31 Ga0065714_10012757 3300005288 Bacteria 2553
32 Ga0065714_10065719 3300005288 Bacteria 8736
33 Ga0065714_10066179 3300005288 Bacteria 7422
34 Ga0065714_10074284 3300005288 Bacteria 3058
35 Ga0065714_10114724 3300005288 Bacteria 1425
36 Ga0065714_10161560 3300005288 Bacteria 1049
37 Ga0065704_10077783 3300005289 Bacteria 4622
38 Ga0065704_10105124 3300005289 Bacteria 2052
39 Ga0070683_100093299 3300005329 Bacteria 2828
40 Ga0068868_100172551 3300005338 Bacteria 1791
41 Ga0068868_100226997 3300005338 Bacteria 1565
42 Ga0070660_100017781 3300005339 Bacteria 5185
43 Ga0070660_100219410 3300005339 Bacteria 1545
44 Ga0070671_100051095 3300005355 Bacteria 3438
45 Ga0070673_100012973 3300005364 Bacteria 5745
46 Ga0070659_100000154 3300005366 Bacteria 52564
47 Ga0070659_100033537 3300005366 Bacteria 3988
48 Ga0070678_100000507 3300005456 Bacteria 18795
49 Ga0070662_100000103 3300005457 Bacteria 46838
50 Ga0070681_10054331 3300005458 Bacteria 3991
51 Ga0068867_100001225 3300005459 Bacteria 17675
52 Ga0070679_100023401 3300005530 Bacteria 6046
53 Ga0068853_100019944 3300005539 Bacteria 5568
54 Ga0068853_100043073 3300005539 Bacteria 3862
55 Ga0068853_100347647 3300005539 Bacteria 1379
56 Ga0070672_100057221 3300005543 Bacteria 3060
57 Ga0070665_100000083 3300005548 Bacteria 181044
58 Ga0068855_100000227 3300005563 Bacteria 71930
59 Ga0068855_100004780 3300005563 Bacteria 16536
60 Ga0068855_100028994 3300005563 Bacteria 6620
61 Ga0068855_100133069 3300005563 Bacteria 2839
62 Ga0068855_100190352 3300005563 Bacteria 2315
63 Ga0068855_100226479 3300005563 Bacteria 2095
64 Ga0068857_100021138 3300005577 Bacteria 5726
65 Ga0068856_100000015 3300005614 Bacteria 157353
66 Ga0068856_100009813 3300005614 Bacteria 9301
67 Ga0068856_100118699 3300005614 Bacteria 2646
68 Ga0068852_100002453 3300005616 Bacteria 12768
69 Ga0068852_100280216 3300005616 Bacteria 1607
70 Ga0068852_100370367 3300005616 Bacteria 1403
71 Ga0068866_10019315 3300005718 Bacteria 3100
72 Ga0068858_100080704 3300005842 Bacteria 3023
73 Ga0075366_10006856 3300006195 Bacteria 6267
74 Ga0075366_10060040 3300006195 Bacteria 2259
75 Ga0097621_100000041 3300006237 Bacteria 66329
76 Ga0075370_10019216 3300006353 Bacteria 3719
77 Ga0068871_100000719 3300006358 Bacteria 22424
78 Ga0068865_100000886 3300006881 Bacteria 16967
79 Ga0105240_10000010 3300009093 Bacteria 537830
80 Ga0105240_10006933 3300009093 Bacteria 16551
81 Ga0105240_10050600 3300009093 Bacteria 5236
82 Ga0105240_10050856 3300009093 Bacteria 5221
83 Ga0105240_10051628 3300009093 Bacteria 5172
84 Ga0105240_10167314 3300009093 Bacteria 2606
85 Ga0105240_10227652 3300009093 Bacteria 2168
86 Ga0105240_10359937 3300009093 Bacteria 1648
87 Ga0105240_10473432 3300009093 Bacteria 1397
88 Ga0105243_10000109 3300009148 Bacteria 94597
89 Ga0105241_10005060 3300009174 Bacteria 9723
90 Ga0105241_10005271 3300009174 Bacteria 9548
91 Ga0105241_10039709 3300009174 Bacteria 3551
92 Ga0105241_10499396 3300009174 Bacteria 1084
93 Ga0105237_10001190 3300009545 Bacteria 34836
94 Ga0105237_10003268 3300009545 Bacteria 19368
95 Ga0105237_10005875 3300009545 Bacteria 13760
96 Ga0105237_10007003 3300009545 Bacteria 12423
97 Ga0105237_10007552 3300009545 Bacteria 11881
98 Ga0105237_10192546 3300009545 Bacteria 2039
99 Ga0105237_10380589 3300009545 Bacteria 1416
100 Ga0105238_10033269 3300009551 Bacteria 5247
101 Ga0105239_10000002 3300010375 Bacteria 610298
102 Ga0105239_10000006 3300010375 Bacteria 442319
103 Ga0105239_10002369 3300010375 Bacteria 24039
104 Ga0105239_10003056 3300010375 Bacteria 20800
105 Ga0105239_10020541 3300010375 Bacteria 7285
106 Ga0105239_10035026 3300010375 Bacteria 5513
107 Ga0105239_10063175 3300010375 Bacteria 4065
108 Ga0105239_11085421 3300010375 Bacteria 921
109 Ga0105246_10085688 3300011119 Bacteria 2257
110 Ga0105246_10139006 3300011119 Bacteria 1824
111 Ga0105246_10292277 3300011119 Bacteria 1312
112 Ga0157373_10000181 3300013100 Bacteria 51804
113 Ga0157373_10000496 3300013100 Bacteria 31139
114 Ga0157373_10002319 3300013100 Bacteria 14426
115 Ga0157373_10009423 3300013100 Bacteria 7211
116 Ga0157373_10025813 3300013100 Bacteria 4247
117 Ga0157373_10060299 3300013100 Bacteria 2688
118 Ga0157373_10063345 3300013100 Bacteria 2618
119 Ga0157371_10000141 3300013102 Bacteria 104396
120 Ga0157371_10000348 3300013102 Bacteria 59339
121 Ga0157371_10000869 3300013102 Bacteria 34259
122 Ga0157371_10001213 3300013102 Bacteria 27466
123 Ga0157371_10017779 3300013102 Bacteria 5274
124 Ga0157371_10025503 3300013102 Bacteria 4307
125 Ga0157371_10054989 3300013102 Bacteria 2825
126 Ga0157370_10016882 3300013104 Bacteria 7379
127 Ga0157370_10028975 3300013104 Bacteria 5440
128 Ga0157370_10028982 3300013104 Bacteria 5439
129 Ga0157370_10034905 3300013104 Bacteria 4893
130 Ga0157370_10055630 3300013104 Bacteria 3768
131 Ga0157370_10070466 3300013104 Bacteria 3300
132 Ga0157370_10080370 3300013104 Bacteria 3069
133 Ga0157370_10118478 3300013104 Bacteria 2473
134 Ga0157370_10211262 3300013104 Bacteria 1798
135 Ga0157370_10734877 3300013104 Bacteria 900
136 Ga0157369_10000005 3300013105 Bacteria 470816
137 Ga0157369_10334547 3300013105 Bacteria 1573
138 Ga0157369_10344326 3300013105 Bacteria 1548
139 Ga0157374_10000129 3300013296 Bacteria 69468
140 Ga0157374_10009486 3300013296 Bacteria 8358
141 Ga0157378_10005178 3300013297 Bacteria 11451
142 Ga0157378_10533424 3300013297 Bacteria 1177
143 Ga0157378_10701871 3300013297 Bacteria 1031
144 Ga0163162_10000068 3300013306 Bacteria 97068
145 Ga0163162_10000205 3300013306 Bacteria 54827
146 Ga0163162_10023053 3300013306 Bacteria 6140
147 Ga0163162_10051854 3300013306 Bacteria 4118
148 Ga0163162_10523559 3300013306 Bacteria 1315
149 Ga0157372_10000016 3300013307 Bacteria 220177
150 Ga0157372_10000418 3300013307 Bacteria 46635
151 Ga0157372_10001333 3300013307 Bacteria 26670
152 Ga0157372_10026851 3300013307 Bacteria 6268
153 Ga0157372_10137828 3300013307 Bacteria 2811
154 Ga0157372_10159458 3300013307 Bacteria 2606
155 Ga0157372_10205212 3300013307 Bacteria 2284
156 Ga0157375_10012166 3300013308 Bacteria 7627
157 Ga0157375_10026133 3300013308 Bacteria 5437
158 Ga0157375_10062384 3300013308 Bacteria 3704
159 Ga0157375_10070440 3300013308 Bacteria 3507
160 Ga0182008_10000009 3300014497 Bacteria 331416
161 Ga0182008_10000128 3300014497 Bacteria 57510
162 Ga0182008_10000159 3300014497 Bacteria 53199
163 Ga0182008_10027796 3300014497 Bacteria 2862
164 Ga0182008_10054294 3300014497 Bacteria 1982
165 Ga0182008_10121688 3300014497 Bacteria 1297
166 Ga0157377_10002017 3300014745 Bacteria 8897
167 Ga0157376_10019140 3300014969 Bacteria 5268
168 Ga0182006_1000743 3300015261 Bacteria 22312
169 Ga0182006_1003034 3300015261 Bacteria 8828
170 Ga0182006_1006938 3300015261 Bacteria 5213
171 Ga0182007_10000080 3300015262 Bacteria 73401
172 Ga0182007_10006303 3300015262 Bacteria 5102
173 Ga0182007_10022277 3300015262 Bacteria 2239
174 Ga0182007_10036588 3300015262 Bacteria 1651
175 Ga0183373_1003 3300015682 Bacteria 558813
176 Ga0163161_10006049 3300017792 Bacteria 8389
177 Ga0163161_10007755 3300017792 Bacteria 7426
178 Ga0163161_10007957 3300017792 Bacteria 7335
179 Ga0163161_10016132 3300017792 Bacteria 5214
180 Ga0163161_10016886 3300017792 Bacteria 5102
181 Ga0163161_10039893 3300017792 Bacteria 3372
182 Ga0213872_10027569 3300021361 Bacteria 2607
183 Ga0207427_100090 3300025231 Bacteria 133759
184 Ga0209437_100017 3300025233 Bacteria 694471
185 Ga0209437_100034 3300025233 Bacteria 494007
186 Ga0207425_1000004 3300025245 Bacteria 1092421
187 Ga0209026_1002280 3300025250 Bacteria 7334
188 Ga0209129_1000005 3300025258 Bacteria 777812
189 Ga0209233_1000038 3300025261 Bacteria 548972
190 Ga0209233_1004117 3300025261 Bacteria 5010
191 Ga0209455_1008250 3300025272 Bacteria 2849
192 Ga0209676_1000001 3300025292 Bacteria 1852142
193 Ga0209025_1000009 3300025294 Bacteria 1092561
194 Ga0209758_1000010 3300025297 Bacteria 1092782
195 Ga0209050_1000408 3300025298 Bacteria 80140
196 Ga0207647_10000062 3300025904 Bacteria 83809
197 Ga0207647_10000263 3300025904 Bacteria 43120
198 Ga0207705_10000080 3300025909 Bacteria 119562
199 Ga0207654_10037439 3300025911 Bacteria 2716
200 Ga0207695_10000019 3300025913 Bacteria 732137
201 Ga0207695_10005987 3300025913 Bacteria 15904
202 Ga0207695_10028435 3300025913 Bacteria 6199
203 Ga0207695_10136865 3300025913 Bacteria 2402
204 Ga0207695_10357498 3300025913 Bacteria 1347
205 Ga0207671_10000667 3300025914 Bacteria 44873
206 Ga0207671_10011704 3300025914 Bacteria 7111
207 Ga0207671_10013713 3300025914 Bacteria 6436
208 Ga0207671_10038242 3300025914 Bacteria 3556
209 Ga0207671_10126988 3300025914 Bacteria 1954
210 Ga0207657_10135076 3300025919 Bacteria 2019
211 Ga0207652_10015415 3300025921 Bacteria 6209
212 Ga0207694_10017459 3300025924 Bacteria 5424
213 Ga0207694_10175215 3300025924 Bacteria 1738
214 Ga0207700_10683410 3300025928 Bacteria 916
215 Ga0207644_10004371 3300025931 Bacteria 9169
216 Ga0207690_10000518 3300025932 Bacteria 25073
217 Ga0207690_10098975 3300025932 Bacteria 2078
218 Ga0207706_10004297 3300025933 Bacteria 13389
219 Ga0207709_10000072 3300025935 Bacteria 178084
220 Ga0207704_10000037 3300025938 Bacteria 93990
221 Ga0207661_10071519 3300025944 Bacteria 2835
222 Ga0207667_10000217 3300025949 Bacteria 80489
223 Ga0207667_10004777 3300025949 Bacteria 16568
224 Ga0207667_10010632 3300025949 Bacteria 10742
225 Ga0207667_10016394 3300025949 Bacteria 8375
226 Ga0207667_10070791 3300025949 Bacteria 3629
227 Ga0207667_10196421 3300025949 Bacteria 2070
228 Ga0207667_10324607 3300025949 Bacteria 1572
229 Ga0207677_10101093 3300026023 Bacteria 2122
230 Ga0207639_10022388 3300026041 Bacteria 4552
231 Ga0207702_10000883 3300026078 Bacteria 31196
232 Ga0207702_10043049 3300026078 Bacteria 3789
233 Ga0207648_10006640 3300026089 Bacteria 11486
234 Ga0207683_10002162 3300026121 Bacteria 17271
235 Ga0207698_10273665 3300026142 Bacteria 1558
236 Ga0268266_10000095 3300028379 Bacteria 186169
237 Ga0307517_10005537 3300028786 Bacteria 18980
238 Ga0307515_10001752 3300028794 Bacteria 48338
239 Ga0307515_10003953 3300028794 Bacteria 30928
240 Ga0307515_10050824 3300028794 Bacteria 6198
241 Ga0265338_10014893 3300028800 Bacteria 8601
242 Ga0316177_1115437 3300030731 Bacteria 2725
243 Ga0316176_1034171 3300030732 Bacteria 18263
244 Ga0316183_1083168 3300030742 Bacteria 31711
245 Ga0316181_1043546 3300030744 Bacteria 1218
246 Ga0265330_10001163 3300031235 Bacteria 15675
247 Ga0307509_10043540 3300031507 Bacteria 4858
248 Ga0307408_100001197 3300031548 Bacteria 19594
249 Ga0307408_100002023 3300031548 Bacteria 14625
250 Ga0307405_10000030 3300031731 Bacteria 99574
251 Ga0307405_10055188 3300031731 Bacteria 2485
252 Ga0307407_10000023 3300031903 Bacteria 118352
253 Ga0307412_10000084 3300031911 Bacteria 90908
254 Ga0307412_10087903 3300031911 Bacteria 2166
255 Ga0307412_10105615 3300031911 Bacteria 2001
256 Ga0307412_10370943 3300031911 Bacteria 1156
257 Ga0307416_100000049 3300032002 Bacteria 118358
258 Ga0307416_100177238 3300032002 Bacteria 1993
259 Ga0307414_10000056 3300032004 Bacteria 113603
260 Ga0307414_10000555 3300032004 Bacteria 19494
261 Ga0307414_10002575 3300032004 Bacteria 9540
262 Ga0307414_10007494 3300032004 Bacteria 6132
263 Ga0307414_10016670 3300032004 Bacteria 4474
264 Ga0307414_10052597 3300032004 Bacteria 2835
265 Ga0307414_10070712 3300032004 Bacteria 2514
266 Ga0307507_10005801 3300033179 Bacteria 19805
267 Ga0307510_10003047 3300033180 Bacteria 19348
268 Ga0373941_0109017 3300035115 Bacteria 973
269 Ga0395899_0000002 3300037312 Bacteria 1324310
270 Ga0395899_0000283 3300037312 Bacteria 65893
271 Ga0395899_0013561 3300037312 Bacteria 6230
272 Ga0395900_0000095 3300037418 Bacteria 164383
273 Ga0395900_0000694 3300037418 Bacteria 44919
274 Ga0395900_0007931 3300037418 Bacteria 10931
275 Ga0395900_0332515 3300037418 Bacteria 1497
276 Ga0395898_0015496 3300037466 Bacteria 7818
277 Ga0395898_0306045 3300037466 Bacteria 1516
278 Ga0395905_0000686 3300037471 Bacteria 44822
279 Ga0395905_0002844 3300037471 Bacteria 18950
280 Ga0395905_0077673 3300037471 Bacteria 3111
281 Ga0395901_0000890 3300038443 Bacteria 32857
282 Ga0395901_0006685 3300038443 Bacteria 11656
283 Ga0400483_151799 3300039062 Bacteria 2706
284 Ga0436361_0088997 3300039447 Bacteria 5506
285 Ga0451787_240679 3300041441 Bacteria 1359
286 Ga0439448_0031970 3300042005 Bacteria 1673
287 Ga0439455_0063217 3300042012 Bacteria 985
288 Ga0439457_005091 3300042014 Bacteria 3347
289 Ga0451577_0000010 3300042876 Bacteria 616686
290 Ga0451577_0083282 3300042876 Unclassified 2853
291 Ga0453683_0000111 3300044673 Bacteria 122663
292 Ga0453683_0006778 3300044673 Bacteria 7825
293 Ga0453683_0199574 3300044673 Bacteria 1270
294 Ga0466966_0118556 3300044684 Bacteria 1627
295 Ga0453684_0000130 3300044712 Bacteria 331761
296 Ga0453684_0269559 3300044712 Bacteria 1946
297 Ga0453684_0646178 3300044712 Bacteria 1155
298 Ga0451576_0000670 3300045051 Bacteria 70399
299 Ga0451576_0123353 3300045051 Bacteria 2698
300 Ga0451576_0165377 3300045051 Unclassified 2308
301 Ga0451576_0520747 3300045051 Bacteria 1249
302 Ga0466958_0069529 3300045836 Bacteria 2153
303 Ga0495650_0000014 3300046471 Bacteria 581606
304 Ga0495585_0001438 3300046492 Bacteria 18677
305 Ga0495585_0002656 3300046492 Bacteria 12556
306 Ga0495583_0046887 3300046506 Bacteria 1991
307 Ga0495606_0000241 3300046507 Bacteria 96663
308 Ga0495606_0019665 3300046507 Bacteria 5012
309 Ga0495606_0204474 3300046507 Bacteria 1123
310 Ga0495610_0000565 3300046512 Bacteria 37056
311 Ga0495610_0004805 3300046512 Bacteria 9859
312 Ga0495610_0005548 3300046512 Bacteria 8931
313 Ga0495616_0005420 3300046513 Bacteria 7861
314 Ga0495616_0018379 3300046513 Bacteria 3838
315 Ga0495631_0008204 3300046518 Bacteria 5268
316 Ga0495648_0001856 3300046524 Bacteria 20231
317 Ga0495648_0036840 3300046524 Bacteria 3149
318 Ga0495642_0130802 3300046528 Unclassified 1080
319 Ga0495652_0120907 3300046529 Bacteria 2089
320 Ga0495609_0007672 3300046538 Bacteria 5361
321 Ga0495633_0000069 3300046558 Bacteria 135128
322 Ga0495633_0002743 3300046558 Bacteria 12174
323 Ga0495668_0000494 3300046616 Bacteria 49401
324 Ga0495668_0048289 3300046616 Bacteria 2362
325 Ga0495625_0000003 3300046660 Bacteria 686847
326 Ga0495625_0020998 3300046660 Bacteria 5034
327 Ga0495625_0025434 3300046660 Bacteria 4491
328 Ga0495625_0063732 3300046660 Bacteria 2602
329 Ga0495661_0002857 3300046665 Bacteria 13074
330 Ga0495661_0035590 3300046665 Bacteria 3122
331 Ga0495658_0010036 3300046683 Bacteria 4728
332 Ga0495649_0000002 3300046694 Bacteria 1093458
333 Ga0495687_000785 3300047443 Bacteria 34129
334 Ga0495687_001629 3300047443 Bacteria 20224
335 Ga0495686_0000582 3300047472 Bacteria 51799
336 Ga0495686_0001784 3300047472 Bacteria 21898
337 Ga0496116_0001232 3300048919 Bacteria 29803
338 Ga0496117_0005680 3300048920 Bacteria 13001
339 Ga0496122_0001073 3300048925 Bacteria 47498
340 Ga0496122_0004988 3300048925 Bacteria 16061
341 Ga0501223_000832 3300049663 Bacteria 7325
342 Ga0501241_011223 3300049758 Bacteria 1627
343 nmdc:mga0k408_1769_c1 3300050493 Bacteria 11585
344 nmdc:mga0k408_847_c1 3300050493 Bacteria 16835
345 nmdc:mga07m45_19897_c1 3300050496 Bacteria 3641
346 Ga0500635_0000725 3300053080 Bacteria 8283
347 Ga0500651_0001952 3300053093 Bacteria 10673
348 Ga0500608_000867 3300053122 Bacteria 10918
349 Ga0500608_001234 3300053122 Bacteria 9125
350 Ga0500618_000002 3300053125 Bacteria 370822
351 Ga0500618_016674 3300053125 Bacteria 1835
352 Ga0500568_0020262 3300053139 Bacteria 2880
353 Ga0500579_141190 3300053143 Bacteria 1087
354 Ga0500616_0121493 3300053153 Bacteria 1247
355 Ga0500624_000602 3300053157 Bacteria 9830

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031731 Ga0307405_10055188 Ga0307405_100551882 202
2 3300031911 Ga0307412_10087903 Ga0307412_100879032 202
3 3300049663 Ga0501223_000832 Ga0501223_000832_3326_4165 202
4 3300046665 Ga0495661_0002857 Ga0495661_0002857_4619_5455 205
5 3300002737 JGI25162J39368_1000011 JGI25162J39368_1000011153 206
6 3300010375 Ga0105239_10020541 Ga0105239_100205416 206
7 3300025233 Ga0209437_100017 Ga0209437_100017316 206
8 3300053153 Ga0500616_0121493 Ga0500616_0121493_146_982 206
9 3300001904 JGI24736J21556_1016942 JGI24736J21556_10169422 208
10 3300001990 JGI24737J22298_10029473 JGI24737J22298_100294732 208
11 3300005338 Ga0068868_100226997 Ga0068868_1002269972 208
12 3300005366 Ga0070659_100033537 Ga0070659_1000335374 208
13 3300005457 Ga0070662_100000103 Ga0070662_1000001034 208
14 3300005842 Ga0068858_100080704 Ga0068858_1000807042 208
15 3300009093 Ga0105240_10050856 Ga0105240_100508564 208
16 3300009174 Ga0105241_10039709 Ga0105241_100397093 208
17 3300011119 Ga0105246_10139006 Ga0105246_101390063 208
18 3300013100 Ga0157373_10063345 Ga0157373_100633454 208
19 3300013296 Ga0157374_10000129 Ga0157374_1000012927 208
20 3300013307 Ga0157372_10137828 Ga0157372_101378282 208
21 3300014745 Ga0157377_10002017 Ga0157377_100020175 208
22 3300025904 Ga0207647_10000062 Ga0207647_1000006251 208
23 3300025911 Ga0207654_10037439 Ga0207654_100374393 208
24 3300025913 Ga0207695_10005987 Ga0207695_1000598720 208
25 3300025933 Ga0207706_10004297 Ga0207706_100042974 208
26 3300026023 Ga0207677_10101093 Ga0207677_101010933 208
27 3300009093 Ga0105240_10359937 Ga0105240_103599372 209
28 3300010375 Ga0105239_10035026 Ga0105239_100350266 209
29 3300017792 Ga0163161_10007755 Ga0163161_100077557 209
30 3300025914 Ga0207671_10038242 Ga0207671_100382423 209
31 3300053157 Ga0500624_000602 Ga0500624_000602_5832_6668 209
32 3300046507 Ga0495606_0204474 Ga0495606_0204474_128_964 210
33 3300005563 Ga0068855_100133069 Ga0068855_1001330692 214
34 3300025949 Ga0207667_10016394 Ga0207667_100163946 214
35 3300002077 JGI24744J21845_10005615 JGI24744J21845_100056154 215
36 3300005338 Ga0068868_100172551 Ga0068868_1001725511 215
37 3300005364 Ga0070673_100012973 Ga0070673_1000129732 215
38 3300005456 Ga0070678_100000507 Ga0070678_1000005075 215
39 3300005459 Ga0068867_100001225 Ga0068867_10000122510 215
40 3300005539 Ga0068853_100347647 Ga0068853_1003476472 215
41 3300005543 Ga0070672_100057221 Ga0070672_1000572211 215
42 3300005616 Ga0068852_100002453 Ga0068852_1000024536 215
43 3300005718 Ga0068866_10019315 Ga0068866_100193151 215
44 3300006237 Ga0097621_100000041 Ga0097621_10000004135 215
45 3300006358 Ga0068871_100000719 Ga0068871_10000071917 215
46 3300006881 Ga0068865_100000886 Ga0068865_1000008869 215
47 3300009174 Ga0105241_10005060 Ga0105241_100050601 215
48 3300009545 Ga0105237_10007003 Ga0105237_100070034 215
49 3300009551 Ga0105238_10033269 Ga0105238_100332693 215
50 3300011119 Ga0105246_10292277 Ga0105246_102922771 215
51 3300013105 Ga0157369_10344326 Ga0157369_103443263 215
52 3300013296 Ga0157374_10009486 Ga0157374_1000948611 215
53 3300013297 Ga0157378_10533424 Ga0157378_105334241 215
54 3300013308 Ga0157375_10062384 Ga0157375_100623842 215
55 3300014969 Ga0157376_10019140 Ga0157376_100191403 215
56 3300025924 Ga0207694_10017459 Ga0207694_100174592 215
57 3300025938 Ga0207704_10000037 Ga0207704_1000003733 215
58 3300026089 Ga0207648_10006640 Ga0207648_1000664012 215
59 3300026121 Ga0207683_10002162 Ga0207683_100021622 215
60 3300009545 Ga0105237_10007552 Ga0105237_1000755210 220
61 3300010375 Ga0105239_10000006 Ga0105239_1000000686 220
62 3300017792 Ga0163161_10007957 Ga0163161_100079578 220
63 3300013102 Ga0157371_10001213 Ga0157371_1000121315 221
64 3300013104 Ga0157370_10070466 Ga0157370_100704662 221
65 3300013104 Ga0157370_10118478 Ga0157370_101184782 221
66 3300013105 Ga0157369_10334547 Ga0157369_103345472 221
67 3300013307 Ga0157372_10026851 Ga0157372_100268515 221
68 3300014497 Ga0182008_10000159 Ga0182008_100001599 221
69 3300013100 Ga0157373_10060299 Ga0157373_100602993 222
70 3300031731 Ga0307405_10000030 Ga0307405_1000003071 222
71 3300013102 Ga0157371_10025503 Ga0157371_100255034 223
72 3300013104 Ga0157370_10055630 Ga0157370_100556304 223
73 3300031548 Ga0307408_100001197 Ga0307408_1000011974 224
74 3300050493 nmdc:mga0k408_1769_c1 nmdc:mga0k408_1769_c1_8139_8978 224
75 3300037466 Ga0395898_0015496 Ga0395898_0015496_2508_3329 225
76 3300037418 Ga0395900_0332515 Ga0395900_0332515_345_1169 226
77 3300039062 Ga0400483_151799 Ga0400483_151799_1155_1982 226
78 3300002773 JGI25152J39213_1001701 JGI25152J39213_10017018 227
79 3300002774 JGI25150J39212_1000030 JGI25150J39212_10000308 227
80 3300003187 JGI25151J46595_10000129 JGI25151J46595_1000012986 227
81 3300003215 JGI25153J46596_10000096 JGI25153J46596_1000009686 227
82 3300009545 Ga0105237_10005875 Ga0105237_1000587511 227
83 3300013100 Ga0157373_10009423 Ga0157373_100094234 227
84 3300014497 Ga0182008_10000128 Ga0182008_1000012869 227
85 3300015261 Ga0182006_1000743 Ga0182006_10007436 227
86 3300015261 Ga0182006_1006938 Ga0182006_10069383 227
87 3300017792 Ga0163161_10016886 Ga0163161_100168863 227
88 3300025245 Ga0207425_1000004 Ga0207425_1000004302 227
89 3300025258 Ga0209129_1000005 Ga0209129_1000005638 227
90 3300025294 Ga0209025_1000009 Ga0209025_1000009302 227
91 3300025297 Ga0209758_1000010 Ga0209758_1000010303 227
92 3300025914 Ga0207671_10013713 Ga0207671_100137134 227
93 3300028794 Ga0307515_10050824 Ga0307515_100508246 227
94 3300048925 Ga0496122_0001073 Ga0496122_0001073_8418_9257 227
95 3300053093 Ga0500651_0001952 Ga0500651_0001952_7403_8239 227
96 3300002741 JGI25157J39369_1009348 JGI25157J39369_10093481 228
97 3300003323 rootH1_10192830 rootH1_101928305 228
98 3300005329 Ga0070683_100093299 Ga0070683_1000932992 228
99 3300006195 Ga0075366_10060040 Ga0075366_100600402 228
100 3300013100 Ga0157373_10000181 Ga0157373_1000018133 228
101 3300025250 Ga0209026_1002280 Ga0209026_10022805 228
102 3300025944 Ga0207661_10071519 Ga0207661_100715192 228
103 3300031235 Ga0265330_10001163 Ga0265330_100011635 228
104 3300032004 Ga0307414_10000056 Ga0307414_1000005637 228
105 3300032004 Ga0307414_10070712 Ga0307414_100707123 228
106 3300041441 Ga0451787_240679 Ga0451787_240679_306_1151 228
107 iso_pu_bacteria 2884634485 2884635868 228
108 iso_pu_bacteria 2919692658 2919694972 228
109 3300005458 Ga0070681_10054331 Ga0070681_100543312 229
110 3300005530 Ga0070679_100023401 Ga0070679_1000234016 229
111 3300009093 Ga0105240_10051628 Ga0105240_100516284 229
112 3300013100 Ga0157373_10000496 Ga0157373_100004963 229
113 3300014497 Ga0182008_10027796 Ga0182008_100277962 229
114 3300014497 Ga0182008_10054294 Ga0182008_100542941 229
115 3300015262 Ga0182007_10006303 Ga0182007_100063037 229
116 3300015262 Ga0182007_10022277 Ga0182007_100222773 229
117 3300015262 Ga0182007_10036588 Ga0182007_100365882 229
118 3300025921 Ga0207652_10015415 Ga0207652_100154153 229
119 3300031548 Ga0307408_100002023 Ga0307408_1000020236 229
120 3300031911 Ga0307412_10000084 Ga0307412_1000008462 229
121 3300032002 Ga0307416_100177238 Ga0307416_1001772381 229
122 3300042014 Ga0439457_005091 Ga0439457_005091_2340_3179 229
123 3300042876 Ga0451577_0000010 Ga0451577_0000010_301021_301857 229
124 3300042876 Ga0451577_0083282 Ga0451577_0083282_1684_2520 229
125 3300044673 Ga0453683_0000111 Ga0453683_0000111_8903_9739 229
126 3300044673 Ga0453683_0006778 Ga0453683_0006778_593_1429 229
127 3300044673 Ga0453683_0199574 Ga0453683_0199574_326_1165 229
128 3300044712 Ga0453684_0000130 Ga0453684_0000130_47163_47999 229
129 3300044712 Ga0453684_0269559 Ga0453684_0269559_373_1215 229
130 3300044712 Ga0453684_0646178 Ga0453684_0646178_23_829 229
131 3300045051 Ga0451576_0000670 Ga0451576_0000670_39195_40031 229
132 3300045051 Ga0451576_0123353 Ga0451576_0123353_295_1131 229
133 3300045051 Ga0451576_0165377 Ga0451576_0165377_322_1158 229
134 3300045051 Ga0451576_0520747 Ga0451576_0520747_13_849 229
135 3300053139 Ga0500568_0020262 Ga0500568_0020262_921_1757 229
136 iso_pu_bacteria 2839989709 2839992826 229
137 iso_pu_bacteria 2902048731 2902051267 229
138 2162886007 SwRhRL2b_contig_1587187 SwRhRL2b_0907.00002480 230
139 2162886007 SwRhRL2b_contig_2669455 SwRhRL2b_0959.00001720 230
140 3300001979 JGI24740J21852_10011425 JGI24740J21852_100114255 230
141 3300001989 JGI24739J22299_10009508 JGI24739J22299_100095081 230
142 3300001990 JGI24737J22298_10000823 JGI24737J22298_100008239 230
143 3300002067 JGI24735J21928_10000001 JGI24735J21928_10000001369 230
144 3300002737 JGI25162J39368_1000733 JGI25162J39368_100073319 230
145 3300003214 JGI25165J46597_1001509 JGI25165J46597_10015092 230
146 3300003316 rootH1_10024829 rootH1_1002482926 230
147 3300003316 rootH1_10034112 rootH1_100341125 230
148 3300003320 rootH2_10006566 rootH2_100065664 230
149 3300003320 rootH2_10173610 rootH2_101736104 230
150 3300003322 rootL2_10076109 rootL2_100761093 230
151 3300003323 rootH1_10031035 rootH1_100310356 230
152 3300003323 rootH1_10096670 rootH1_100966704 230
153 3300003323 rootH1_10100595 rootH1_101005951 230
154 3300003323 rootH1_10208522 rootH1_102085221 230
155 3300003781 Ga0055536_1000086 Ga0055536_100008625 230
156 3300003791 Ga0055530_10001976 Ga0055530_1000197617 230
157 3300005288 Ga0065714_10004765 Ga0065714_100047656 230
158 3300005288 Ga0065714_10012757 Ga0065714_100127572 230
159 3300005288 Ga0065714_10065719 Ga0065714_100657198 230
160 3300005288 Ga0065714_10066179 Ga0065714_100661796 230
161 3300005288 Ga0065714_10074284 Ga0065714_100742842 230
162 3300005288 Ga0065714_10114724 Ga0065714_101147242 230
163 3300005288 Ga0065714_10161560 Ga0065714_101615601 230
164 3300005289 Ga0065704_10077783 Ga0065704_100777834 230
165 3300005289 Ga0065704_10105124 Ga0065704_101051241 230
166 3300005339 Ga0070660_100017781 Ga0070660_1000177813 230
167 3300005339 Ga0070660_100219410 Ga0070660_1002194101 230
168 3300005355 Ga0070671_100051095 Ga0070671_1000510953 230
169 3300005366 Ga0070659_100000154 Ga0070659_10000015418 230
170 3300005539 Ga0068853_100019944 Ga0068853_1000199446 230
171 3300005539 Ga0068853_100043073 Ga0068853_1000430732 230
172 3300005548 Ga0070665_100000083 Ga0070665_10000008345 230
173 3300005563 Ga0068855_100000227 Ga0068855_10000022763 230
174 3300005563 Ga0068855_100004780 Ga0068855_1000047807 230
175 3300005563 Ga0068855_100028994 Ga0068855_1000289946 230
176 3300005563 Ga0068855_100190352 Ga0068855_1001903523 230
177 3300005563 Ga0068855_100226479 Ga0068855_1002264792 230
178 3300005577 Ga0068857_100021138 Ga0068857_1000211387 230
179 3300005614 Ga0068856_100000015 Ga0068856_10000001570 230
180 3300005614 Ga0068856_100009813 Ga0068856_10000981312 230
181 3300005614 Ga0068856_100118699 Ga0068856_1001186993 230
182 3300005616 Ga0068852_100280216 Ga0068852_1002802162 230
183 3300005616 Ga0068852_100370367 Ga0068852_1003703672 230
184 3300006195 Ga0075366_10006856 Ga0075366_100068568 230
185 3300006353 Ga0075370_10019216 Ga0075370_100192164 230
186 3300009093 Ga0105240_10000010 Ga0105240_10000010323 230
187 3300009093 Ga0105240_10006933 Ga0105240_1000693320 230
188 3300009093 Ga0105240_10050600 Ga0105240_100506005 230
189 3300009093 Ga0105240_10167314 Ga0105240_101673143 230
190 3300009093 Ga0105240_10227652 Ga0105240_102276523 230
191 3300009093 Ga0105240_10473432 Ga0105240_104734322 230
192 3300009148 Ga0105243_10000109 Ga0105243_1000010921 230
193 3300009174 Ga0105241_10005271 Ga0105241_1000527111 230
194 3300009174 Ga0105241_10499396 Ga0105241_104993961 230
195 3300009545 Ga0105237_10001190 Ga0105237_1000119023 230
196 3300009545 Ga0105237_10003268 Ga0105237_1000326822 230
197 3300009545 Ga0105237_10192546 Ga0105237_101925462 230
198 3300009545 Ga0105237_10380589 Ga0105237_103805892 230
199 3300010375 Ga0105239_10000002 Ga0105239_1000000235 230
200 3300010375 Ga0105239_10002369 Ga0105239_100023696 230
201 3300010375 Ga0105239_10003056 Ga0105239_1000305620 230
202 3300010375 Ga0105239_10063175 Ga0105239_100631753 230
203 3300010375 Ga0105239_11085421 Ga0105239_110854211 230
204 3300011119 Ga0105246_10085688 Ga0105246_100856882 230
205 3300013100 Ga0157373_10002319 Ga0157373_1000231910 230
206 3300013100 Ga0157373_10025813 Ga0157373_100258132 230
207 3300013102 Ga0157371_10000141 Ga0157371_1000014150 230
208 3300013102 Ga0157371_10000348 Ga0157371_1000034839 230
209 3300013102 Ga0157371_10000869 Ga0157371_100008698 230
210 3300013102 Ga0157371_10017779 Ga0157371_100177793 230
211 3300013102 Ga0157371_10054989 Ga0157371_100549893 230
212 3300013104 Ga0157370_10016882 Ga0157370_100168824 230
213 3300013104 Ga0157370_10028975 Ga0157370_100289754 230
214 3300013104 Ga0157370_10028982 Ga0157370_100289824 230
215 3300013104 Ga0157370_10034905 Ga0157370_100349055 230
216 3300013104 Ga0157370_10080370 Ga0157370_100803703 230
217 3300013104 Ga0157370_10211262 Ga0157370_102112622 230
218 3300013104 Ga0157370_10734877 Ga0157370_107348771 230
219 3300013105 Ga0157369_10000005 Ga0157369_10000005366 230
220 3300013297 Ga0157378_10005178 Ga0157378_1000517813 230
221 3300013297 Ga0157378_10701871 Ga0157378_107018712 230
222 3300013306 Ga0163162_10000068 Ga0163162_1000006845 230
223 3300013306 Ga0163162_10000205 Ga0163162_1000020519 230
224 3300013306 Ga0163162_10023053 Ga0163162_100230534 230
225 3300013306 Ga0163162_10051854 Ga0163162_100518546 230
226 3300013306 Ga0163162_10523559 Ga0163162_105235591 230
227 3300013307 Ga0157372_10000016 Ga0157372_10000016197 230
228 3300013307 Ga0157372_10000418 Ga0157372_1000041819 230
229 3300013307 Ga0157372_10001333 Ga0157372_1000133327 230
230 3300013307 Ga0157372_10159458 Ga0157372_101594584 230
231 3300013307 Ga0157372_10205212 Ga0157372_102052123 230
232 3300013308 Ga0157375_10012166 Ga0157375_100121664 230
233 3300013308 Ga0157375_10026133 Ga0157375_100261334 230
234 3300013308 Ga0157375_10070440 Ga0157375_100704402 230
235 3300014497 Ga0182008_10000009 Ga0182008_10000009128 230
236 3300014497 Ga0182008_10121688 Ga0182008_101216882 230
237 3300015261 Ga0182006_1003034 Ga0182006_10030348 230
238 3300015262 Ga0182007_10000080 Ga0182007_1000008046 230
239 3300015682 Ga0183373_1003 Ga0183373_1003193 230
240 3300017792 Ga0163161_10006049 Ga0163161_100060498 230
241 3300017792 Ga0163161_10016132 Ga0163161_100161325 230
242 3300017792 Ga0163161_10039893 Ga0163161_100398933 230
243 3300021361 Ga0213872_10027569 Ga0213872_100275694 230
244 3300025231 Ga0207427_100090 Ga0207427_10009063 230
245 3300025233 Ga0209437_100034 Ga0209437_100034272 230
246 3300025261 Ga0209233_1000038 Ga0209233_1000038272 230
247 3300025261 Ga0209233_1004117 Ga0209233_10041173 230
248 3300025272 Ga0209455_1008250 Ga0209455_10082502 230
249 3300025292 Ga0209676_1000001 Ga0209676_1000001312 230
250 3300025298 Ga0209050_1000408 Ga0209050_100040824 230
251 3300025904 Ga0207647_10000263 Ga0207647_1000026340 230
252 3300025909 Ga0207705_10000080 Ga0207705_1000008045 230
253 3300025913 Ga0207695_10000019 Ga0207695_10000019132 230
254 3300025913 Ga0207695_10028435 Ga0207695_100284354 230
255 3300025913 Ga0207695_10136865 Ga0207695_101368652 230
256 3300025913 Ga0207695_10357498 Ga0207695_103574982 230
257 3300025914 Ga0207671_10000667 Ga0207671_1000066724 230
258 3300025914 Ga0207671_10011704 Ga0207671_100117041 230
259 3300025914 Ga0207671_10126988 Ga0207671_101269882 230
260 3300025919 Ga0207657_10135076 Ga0207657_101350761 230
261 3300025924 Ga0207694_10175215 Ga0207694_101752152 230
262 3300025928 Ga0207700_10683410 Ga0207700_106834101 230
263 3300025931 Ga0207644_10004371 Ga0207644_100043713 230
264 3300025932 Ga0207690_10000518 Ga0207690_1000051811 230
265 3300025932 Ga0207690_10098975 Ga0207690_100989753 230
266 3300025935 Ga0207709_10000072 Ga0207709_1000007268 230
267 3300025949 Ga0207667_10000217 Ga0207667_1000021716 230
268 3300025949 Ga0207667_10004777 Ga0207667_100047777 230
269 3300025949 Ga0207667_10010632 Ga0207667_1001063210 230
270 3300025949 Ga0207667_10070791 Ga0207667_100707914 230
271 3300025949 Ga0207667_10196421 Ga0207667_101964212 230
272 3300025949 Ga0207667_10324607 Ga0207667_103246072 230
273 3300026041 Ga0207639_10022388 Ga0207639_100223883 230
274 3300026078 Ga0207702_10000883 Ga0207702_1000088325 230
275 3300026078 Ga0207702_10043049 Ga0207702_100430493 230
276 3300026142 Ga0207698_10273665 Ga0207698_102736652 230
277 3300028379 Ga0268266_10000095 Ga0268266_1000009549 230
278 3300028786 Ga0307517_10005537 Ga0307517_100055379 230
279 3300028794 Ga0307515_10001752 Ga0307515_100017529 230
280 3300028794 Ga0307515_10003953 Ga0307515_1000395334 230
281 3300028800 Ga0265338_10014893 Ga0265338_100148936 230
282 3300030731 Ga0316177_1115437 Ga0316177_11154372 230
283 3300030732 Ga0316176_1034171 Ga0316176_103417115 230
284 3300030742 Ga0316183_1083168 Ga0316183_10831682 230
285 3300030744 Ga0316181_1043546 Ga0316181_10435462 230
286 3300031507 Ga0307509_10043540 Ga0307509_100435402 230
287 3300031903 Ga0307407_10000023 Ga0307407_1000002349 230
288 3300031911 Ga0307412_10105615 Ga0307412_101056152 230
289 3300031911 Ga0307412_10370943 Ga0307412_103709431 230
290 3300032002 Ga0307416_100000049 Ga0307416_10000004962 230
291 3300032004 Ga0307414_10000555 Ga0307414_100005556 230
292 3300032004 Ga0307414_10002575 Ga0307414_100025756 230
293 3300032004 Ga0307414_10007494 Ga0307414_100074947 230
294 3300032004 Ga0307414_10016670 Ga0307414_100166705 230
295 3300032004 Ga0307414_10052597 Ga0307414_100525973 230
296 3300033179 Ga0307507_10005801 Ga0307507_1000580113 230
297 3300033180 Ga0307510_10003047 Ga0307510_100030473 230
298 3300035115 Ga0373941_0109017 Ga0373941_0109017_144_953 230
299 3300037312 Ga0395899_0000002 Ga0395899_0000002_750835_751671 230
300 3300037312 Ga0395899_0000283 Ga0395899_0000283_6463_7299 230
301 3300037312 Ga0395899_0013561 Ga0395899_0013561_4266_5102 230
302 3300037418 Ga0395900_0000095 Ga0395900_0000095_5924_6763 230
303 3300037418 Ga0395900_0000694 Ga0395900_0000694_37108_37944 230
304 3300037418 Ga0395900_0007931 Ga0395900_0007931_4061_4900 230
305 3300037466 Ga0395898_0306045 Ga0395898_0306045_69_908 230
306 3300037471 Ga0395905_0000686 Ga0395905_0000686_3692_4531 230
307 3300037471 Ga0395905_0002844 Ga0395905_0002844_14158_14994 230
308 3300037471 Ga0395905_0077673 Ga0395905_0077673_2185_3021 230
309 3300038443 Ga0395901_0000890 Ga0395901_0000890_23768_24604 230
310 3300038443 Ga0395901_0006685 Ga0395901_0006685_2705_3544 230
311 3300039447 Ga0436361_0088997 Ga0436361_0088997_1519_2358 230
312 3300042005 Ga0439448_0031970 Ga0439448_0031970_703_1542 230
313 3300042012 Ga0439455_0063217 Ga0439455_0063217_68_907 230
314 3300044684 Ga0466966_0118556 Ga0466966_0118556_552_1388 230
315 3300045836 Ga0466958_0069529 Ga0466958_0069529_766_1602 230
316 3300046471 Ga0495650_0000014 Ga0495650_0000014_38657_39493 230
317 3300046492 Ga0495585_0001438 Ga0495585_0001438_4323_5159 230
318 3300046492 Ga0495585_0002656 Ga0495585_0002656_1196_2110 230
319 3300046506 Ga0495583_0046887 Ga0495583_0046887_569_1405 230
320 3300046507 Ga0495606_0000241 Ga0495606_0000241_43005_43841 230
321 3300046507 Ga0495606_0019665 Ga0495606_0019665_3767_4603 230
322 3300046512 Ga0495610_0000565 Ga0495610_0000565_30054_30893 230
323 3300046512 Ga0495610_0004805 Ga0495610_0004805_5263_6099 230
324 3300046512 Ga0495610_0005548 Ga0495610_0005548_2285_3124 230
325 3300046513 Ga0495616_0005420 Ga0495616_0005420_3953_4789 230
326 3300046513 Ga0495616_0018379 Ga0495616_0018379_875_1711 230
327 3300046518 Ga0495631_0008204 Ga0495631_0008204_4333_5169 230
328 3300046524 Ga0495648_0001856 Ga0495648_0001856_2311_3147 230
329 3300046524 Ga0495648_0036840 Ga0495648_0036840_503_1339 230
330 3300046528 Ga0495642_0130802 Ga0495642_0130802_58_894 230
331 3300046529 Ga0495652_0120907 Ga0495652_0120907_685_1521 230
332 3300046538 Ga0495609_0007672 Ga0495609_0007672_4415_5305 230
333 3300046558 Ga0495633_0000069 Ga0495633_0000069_47242_48078 230
334 3300046558 Ga0495633_0002743 Ga0495633_0002743_690_1526 230
335 3300046616 Ga0495668_0000494 Ga0495668_0000494_25511_26347 230
336 3300046616 Ga0495668_0048289 Ga0495668_0048289_662_1498 230
337 3300046660 Ga0495625_0000003 Ga0495625_0000003_197013_197849 230
338 3300046660 Ga0495625_0020998 Ga0495625_0020998_897_1733 230
339 3300046660 Ga0495625_0025434 Ga0495625_0025434_3365_4201 230
340 3300046660 Ga0495625_0063732 Ga0495625_0063732_487_1323 230
341 3300046665 Ga0495661_0035590 Ga0495661_0035590_2169_3005 230
342 3300046683 Ga0495658_0010036 Ga0495658_0010036_1074_1910 230
343 3300046694 Ga0495649_0000002 Ga0495649_0000002_809144_809980 230
344 3300047443 Ga0495687_000785 Ga0495687_000785_13664_14515 230
345 3300047443 Ga0495687_001629 Ga0495687_001629_15787_16626 230
346 3300047472 Ga0495686_0000582 Ga0495686_0000582_50180_51016 230
347 3300047472 Ga0495686_0001784 Ga0495686_0001784_5834_6670 230
348 3300048919 Ga0496116_0001232 Ga0496116_0001232_5714_6553 230
349 3300048920 Ga0496117_0005680 Ga0496117_0005680_5512_6351 230
350 3300048925 Ga0496122_0004988 Ga0496122_0004988_3778_4617 230
351 3300049758 Ga0501241_011223 Ga0501241_011223_141_980 230
352 3300050493 nmdc:mga0k408_847_c1 nmdc:mga0k408_847_c1_16_852 230
353 3300050496 nmdc:mga07m45_19897_c1 nmdc:mga07m45_19897_c1_1144_1986 230
354 3300053080 Ga0500635_0000725 Ga0500635_0000725_5900_6736 230
355 3300053122 Ga0500608_000867 Ga0500608_000867_2549_3385 230
356 3300053122 Ga0500608_001234 Ga0500608_001234_3835_4671 230
357 3300053125 Ga0500618_000002 Ga0500618_000002_210945_211781 230
358 3300053125 Ga0500618_016674 Ga0500618_016674_120_956 230
359 3300053143 Ga0500579_141190 Ga0500579_141190_107_970 230
360 iso_pu_bacteria 2585427687 2586208040 230
361 iso_pu_bacteria 2599185184 2599477259 230
362 iso_pu_bacteria 2721755487 2722730284 230
363 iso_pu_bacteria 2738541283 2738753949 230
364 iso_pu_bacteria 2738541284 2738762833 230
365 iso_pu_bacteria 2738541302 2738853412 230
366 iso_pu_bacteria 2738543023 2739304718 230
367 iso_pu_bacteria 2739367651 2739591123 230
368 iso_pu_bacteria 2739367656 2739615516 230
369 iso_pu_bacteria 2739367663 2739644742 230
370 iso_pu_bacteria 2775506987 2776614395 230
371 iso_pu_bacteria 2818991437 2819548905 230
372 iso_pu_bacteria 2842722452 2842723370 230
373 iso_pu_bacteria 2842903701 2842906862 230
374 iso_pu_bacteria 2842909656 2842909863 230
375 iso_pu_bacteria 2849281842 2849287045 230
376 iso_pu_bacteria 2852623160 2852624120 230
377 iso_pu_bacteria 2852627209 2852627572 230
378 iso_pu_bacteria 2857627736 2857628743 230
379 iso_pu_bacteria 2884933994 2884936960 230
380 iso_pu_bacteria 2890737413 2890739777 230
381 iso_pu_bacteria 2896317667 2896318361 230
382 iso_pu_bacteria 2896344016 2896345971 230
383 iso_pu_bacteria 2898713307 2898715012 230
384 iso_pu_bacteria 2904445276 2904446074 230
385 iso_pu_bacteria 2904780799 2904783916 230
386 iso_pu_bacteria 2919177583 2919181854 230
387 iso_pu_bacteria 2919186247 2919187741 230
388 iso_pu_bacteria 2919437846 2919440760 230
389 iso_pu_bacteria 2928078545 2928079175 230
390 iso_pu_bacteria 2928147474 2928148454 230
391 iso_pu_bacteria 2932082852 2932085751 230
392 iso_pu_bacteria 2939664404 2939664992 230
393 iso_pu_bacteria 2945997725 2946000176 230
394 iso_pu_bacteria 2954016120 2954017092 230
395 iso_pu_bacteria 2977232053 2977232984 230
396 iso_pu_bacteria 3003233435 3003236023 230
397 iso_pu_bacteria 8055588893 8055589188 230

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06325

PrmA

Ribosomal protein L11 methyltransferase (PrmA)

32

309

0.89

PF13649

Methyltransf_25

Methyltransferase domain

177

266

0.87

PF13847

Methyltransf_31

Methyltransferase domain

171

306

0.86

PF05175

MTS

Methyltransferase small domain

142

270

0.82

PF08241

Methyltransf_11

Methyltransferase domain

178

270

0.82

PF13489

Methyltransf_23

Methyltransferase domain

156

289

0.77

PF02475

Met_10

Met-10+ like-protein

130

270

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
3grz-assembly1.cif.gz_B crystal structure of ribosomal protein l11 methylase from lactobacillus delbrueckii subsp. bulgaricus 0.8992 45 228
8g2g-assembly2.cif.gz_B-3 crystal structure of prmt3 with compound yd1113 0.8911 93 189
3r0q-assembly2.cif.gz_G a uniquely open conformation revealed in the crystal structure of arabidopsis thaliana protein arginine methyltransferase 10 0.8897 93 189
1f3l-assembly1.cif.gz_A crystal structure of the conserved core of protein arginine methyltransferase prmt3 0.8896 94 189
8g2g-assembly1.cif.gz_A crystal structure of prmt3 with compound yd1113 0.8876 93 189
ID Description Score Start End Superfamily
3grzA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9347 88 228 3.40.50.150
af_A0A1D6EFY7_537_616_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9265 91 153 3.40.50.150
2nxjB03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9067 88 230 3.40.50.150
af_O02325_138_271_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9047 86 165 3.40.50.150
af_Q8IEC3_50_217_3.40.50.150 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Vaccinia Virus protein VP39 0.9013 92 150 3.40.50.150
ID Description Score Start End GO Terms
AF-A0A519QTR5-F1-model_v4 50S ribosomal protein L11 methyltransferase 1.002 117 230 GO:0005840
GO:0008276
GO:0032259
AF-A0A519QTR5-F1-model_v4 50S ribosomal protein L11 methyltransferase 0.9846 117 230 GO:0005840
GO:0008276
GO:0032259
AF-A0A533T6Q1-F1-model_v4 Class I SAM-dependent rRNA methyltransferase 0.9746 93 150 GO:0003723
GO:0005737
GO:0008168
GO:0032259
AF-A0A354M190-F1-model_v4 50S ribosomal protein L11 methyltransferase 0.9727 104 230 GO:0005840
GO:0008276
GO:0032259
AF-A0A4S4GBJ9-F1-model_v4 50S ribosomal protein L11 methyltransferase 0.9648 86 230 GO:0005840
GO:0008276
GO:0032259

Feature Viewer

pLDDT pTM Quality
90.39 0.81 High
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Predicted Structure (AlphaFold2)

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