F428628

General Info

Members Datasets Scaffolds Average Seq Length
380 215 365 388

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10020532|Ga0105240_100205329
Length 405
Sequence LAVTEPTFNLDFPPHLLTLRDTVASFVANEILPVEQKLPPEARAIPAEQLSVLQGRARKLGLWCLDAPAEYGGAGLTSLEFVVAVEQASKHKFCFPQPGGGVFGHPPPIVLYSASPAQIERYVVGSIQDGAYGFTAIAEPTGGSDPARAIRCRAVRKGDTYVLNGTKSWITHGEYAKYGVVYARTENGVSTFIVDAGTPGMMVVRSLPVLRDHWPTEIQFTDCVIPAENLIGQEGRGLELAGKWVQRARLLYAARAIGVAEESLRIATEWARTRTTFGAALATRQAVQFAIAESRVEVNAARWLVLEAAWKHDMERDIRTDASIAKYAAVEAGFRTVDRMMQIMGAMGLSKELPLEAWFRDLRVAKVLEGSSEMLRIFIARNEIGPAASSKTASSSSKVTGKETQ

Samples

Sample ID Description Type Environment
1 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
2 2643221605 Sphingomonas sp. Root710 Isolate Unclassified
3 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
4 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
5 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
6 2643221672 Variovorax sp. Root434 Isolate Unclassified
7 2808606401 Sphingobium sp. AEW010 Isolate Rhizosphere
8 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
9 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
10 2842733646 Variovorax sp. R-72446 Isolate Unclassified
11 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
12 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
13 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
14 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
15 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
16 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
17 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
18 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
19 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
20 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
21 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
22 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
23 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
24 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
25 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
26 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
30 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
31 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
32 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
33 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
34 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
35 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
36 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
37 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
38 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
39 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
40 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
41 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
42 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
43 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
44 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
45 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
46 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
47 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
48 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
49 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
52 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
53 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
54 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
55 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
56 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
57 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
58 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
59 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
60 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
61 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
62 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
63 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
64 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
65 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
66 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
67 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
68 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
69 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
70 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
71 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
72 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
73 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
74 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
75 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
76 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
77 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
78 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
79 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
80 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
81 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
82 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
83 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
84 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
85 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
86 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
87 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
88 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
89 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
90 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
91 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
92 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
93 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
94 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
95 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
96 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
97 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
98 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
99 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
100 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
102 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
132 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
143 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
147 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
148 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
149 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
150 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
151 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
152 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
153 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
154 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
155 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
156 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
157 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
158 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
159 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
160 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
161 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
162 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
163 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
164 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
165 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
166 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
167 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
168 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
169 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
170 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
171 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
172 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
173 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
174 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
175 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
176 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
177 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
178 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
179 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
180 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
181 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
182 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
183 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
184 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
185 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
186 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
187 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
188 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
189 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
190 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
191 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
192 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
193 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
194 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
195 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
196 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
197 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
198 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
199 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
200 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
202 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
203 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
204 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
205 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
206 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
207 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
208 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
209 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
210 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
211 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
212 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
213 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
214 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
215 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96.05
Metatranscriptomes 0
Isolates 3.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 4.47
Nodule 0
Rhizoplane 1.84
Rhizosphere 87.89
Stem 0
Stem Tuber 0
Unclassified 5.79

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000267 3300001915 Bacteria 15619
2 JGI24740J21852_10000586 3300001979 Bacteria 15698
3 JGI24740J21852_10023183 3300001979 Bacteria 2124
4 JGI24739J22299_10019942 3300001989 Bacteria 2397
5 JGI24739J22299_10024333 3300001989 Bacteria 2135
6 JGI24737J22298_10002355 3300001990 Bacteria 6734
7 JGI25151J46595_10000985 3300003187 Bacteria 21531
8 JGI25151J46595_10030897 3300003187 Bacteria 2100
9 Ga0055530_10000039 3300003791 Bacteria 115587
10 Ga0055531_10003500 3300003794 Bacteria 9985
11 Ga0055543_1004683 3300004625 Bacteria 3660
12 Ga0065165_1000950 3300005262 Bacteria 36689
13 Ga0065165_1013294 3300005262 Bacteria 3284
14 Ga0070658_10000524 3300005327 Bacteria 33242
15 Ga0070670_100000065 3300005331 Bacteria 108496
16 Ga0070666_10026865 3300005335 Bacteria 3765
17 Ga0070666_10071839 3300005335 Bacteria 2356
18 Ga0068868_100189305 3300005338 Bacteria 1711
19 Ga0070660_100024182 3300005339 Bacteria 4506
20 Ga0070691_10000084 3300005341 Bacteria 26309
21 Ga0070691_10007251 3300005341 Bacteria 5075
22 Ga0070661_100001942 3300005344 Bacteria 14311
23 Ga0070668_100000889 3300005347 Bacteria 20782
24 Ga0070668_100001805 3300005347 Bacteria 15563
25 Ga0070668_100003972 3300005347 Bacteria 10941
26 Ga0070668_100289919 3300005347 Bacteria 1369
27 Ga0070669_100100776 3300005353 Bacteria 2178
28 Ga0070671_100000065 3300005355 Bacteria 71901
29 Ga0070671_100014942 3300005355 Bacteria 6272
30 Ga0070671_100070675 3300005355 Bacteria 2912
31 Ga0070673_100034763 3300005364 Bacteria 3817
32 Ga0070659_100013998 3300005366 Bacteria 5986
33 Ga0070659_100020953 3300005366 Bacteria 4972
34 Ga0070659_100049667 3300005366 Bacteria 3299
35 Ga0070667_100000317 3300005367 Bacteria 54103
36 Ga0070667_100013172 3300005367 Bacteria 6836
37 Ga0070709_10000264 3300005434 Bacteria 33638
38 Ga0070714_100019853 3300005435 Bacteria 5482
39 Ga0070714_100071776 3300005435 Bacteria 2995
40 Ga0070714_100209603 3300005435 Bacteria 1786
41 Ga0070713_100000007 3300005436 Bacteria 186402
42 Ga0070713_100003564 3300005436 Bacteria 10283
43 Ga0070710_10011449 3300005437 Bacteria 4382
44 Ga0070711_100022454 3300005439 Bacteria 4090
45 Ga0070705_100063772 3300005440 Bacteria 2199
46 Ga0070694_100089585 3300005444 Bacteria 2156
47 Ga0070663_100009064 3300005455 Bacteria 6147
48 Ga0070663_100041466 3300005455 Bacteria 3229
49 Ga0070678_100054133 3300005456 Bacteria 2922
50 Ga0070662_100071778 3300005457 Bacteria 2554
51 Ga0070681_10042454 3300005458 Bacteria 4557
52 Ga0070685_10098269 3300005466 Bacteria 1783
53 Ga0070697_100000719 3300005536 Bacteria 24687
54 Ga0068853_100000192 3300005539 Bacteria 42895
55 Ga0068853_100026199 3300005539 Bacteria 4895
56 Ga0068853_100079249 3300005539 Bacteria 2872
57 Ga0068853_100095431 3300005539 Plasmid 2622
58 Ga0070686_100127762 3300005544 Bacteria 1754
59 Ga0070695_100014490 3300005545 Bacteria 4752
60 Ga0070696_100013366 3300005546 Bacteria 5507
61 Ga0070693_100008900 3300005547 Bacteria 4979
62 Ga0070665_100000194 3300005548 Bacteria 107719
63 Ga0070665_100004019 3300005548 Bacteria 15490
64 Ga0070665_100081129 3300005548 Bacteria 3249
65 Ga0070665_100197033 3300005548 Bacteria 2015
66 Ga0070704_100037213 3300005549 Bacteria 3322
67 Ga0070704_100076583 3300005549 Bacteria 2447
68 Ga0068855_100024133 3300005563 Bacteria 7279
69 Ga0068855_100033239 3300005563 Bacteria 6157
70 Ga0068855_100083317 3300005563 Bacteria 3704
71 Ga0068855_100286714 3300005563 Bacteria 1826
72 Ga0070664_100005038 3300005564 Bacteria 10588
73 Ga0068857_100005648 3300005577 Bacteria 10695
74 Ga0068857_100034060 3300005577 Bacteria 4506
75 Ga0068857_100070830 3300005577 Bacteria 3106
76 Ga0068857_100244150 3300005577 Bacteria 1645
77 Ga0068854_100017259 3300005578 Bacteria 4828
78 Ga0068854_100031875 3300005578 Bacteria 3664
79 Ga0068854_100063772 3300005578 Bacteria 2676
80 Ga0068856_100003631 3300005614 Bacteria 15494
81 Ga0068856_100016399 3300005614 Bacteria 7167
82 Ga0068852_100001877 3300005616 Bacteria 14300
83 Ga0068852_100005220 3300005616 Bacteria 9263
84 Ga0068852_100199785 3300005616 Bacteria 1892
85 Ga0068859_100006638 3300005617 Bacteria 11752
86 Ga0068859_100038452 3300005617 Bacteria 4801
87 Ga0068864_100000224 3300005618 Bacteria 51280
88 Ga0068864_100008998 3300005618 Bacteria 8234
89 Ga0068864_100012984 3300005618 Bacteria 6894
90 Ga0068861_100072396 3300005719 Bacteria 2674
91 Ga0068851_10004246 3300005834 Bacteria 6452
92 Ga0068851_10009261 3300005834 Bacteria 4572
93 Ga0068863_100000061 3300005841 Bacteria 121811
94 Ga0068858_100000382 3300005842 Bacteria 46439
95 Ga0068858_100001592 3300005842 Bacteria 23140
96 Ga0068858_100045125 3300005842 Bacteria 4084
97 Ga0068860_100000027 3300005843 Bacteria 267207
98 Ga0068860_100000051 3300005843 Bacteria 208179
99 Ga0068860_100000123 3300005843 Bacteria 124700
100 Ga0068862_100000202 3300005844 Bacteria 65969
101 Ga0068862_100001965 3300005844 Bacteria 18641
102 Ga0068862_100002765 3300005844 Bacteria 15371
103 Ga0068862_100068027 3300005844 Bacteria 3072
104 Ga0070717_10071318 3300006028 Bacteria 2898
105 Ga0075431_100377061 3300006847 Bacteria 1423
106 Ga0075434_100101920 3300006871 Bacteria 2878
107 Ga0075436_100000100 3300006914 Bacteria 51034
108 Ga0075436_100121604 3300006914 Bacteria 1827
109 Ga0097620_100006638 3300006931 Bacteria 11752
110 Ga0097620_100038450 3300006931 Bacteria 4801
111 Ga0075435_100012381 3300007076 Bacteria 6312
112 Ga0075435_100019549 3300007076 Bacteria 5176
113 Ga0105251_10072326 3300009011 Bacteria 1603
114 Ga0105240_10002315 3300009093 Bacteria 30826
115 Ga0105240_10005185 3300009093 Bacteria 19495
116 Ga0105240_10020532 3300009093 Bacteria 8806
117 Ga0105240_10029544 3300009093 Bacteria 7139
118 Ga0105240_10067181 3300009093 Bacteria 4444
119 Ga0105240_10136356 3300009093 Bacteria 2939
120 Ga0105240_10161560 3300009093 Bacteria 2660
121 Ga0114129_10075188 3300009147 Bacteria 4704
122 Ga0105243_10000101 3300009148 Bacteria 98298
123 Ga0105241_10002069 3300009174 Bacteria 15160
124 Ga0105241_10003911 3300009174 Bacteria 11035
125 Ga0105241_10007359 3300009174 Bacteria 8099
126 Ga0105248_10000176 3300009177 Bacteria 74521
127 Ga0105248_10048347 3300009177 Bacteria 4772
128 Ga0105237_10000842 3300009545 Bacteria 41838
129 Ga0105237_10009887 3300009545 Bacteria 10186
130 Ga0105237_10029683 3300009545 Bacteria 5556
131 Ga0105237_10322415 3300009545 Bacteria 1549
132 Ga0105238_10000606 3300009551 Bacteria 37665
133 Ga0105238_10005419 3300009551 Bacteria 12608
134 Ga0105238_10018065 3300009551 Bacteria 7167
135 Ga0105238_10071383 3300009551 Bacteria 3470
136 Ga0105249_10009123 3300009553 Bacteria 8675
137 Ga0105249_10129100 3300009553 Bacteria 2411
138 Ga0105249_10315856 3300009553 Bacteria 1572
139 Ga0105239_10021184 3300010375 Bacteria 7167
140 Ga0157373_10001012 3300013100 Bacteria 21704
141 Ga0157373_10014579 3300013100 Bacteria 5762
142 Ga0157371_10000111 3300013102 Bacteria 123977
143 Ga0157370_10001478 3300013104 Bacteria 29082
144 Ga0157370_10053072 3300013104 Bacteria 3867
145 Ga0157369_10065124 3300013105 Bacteria 3923
146 Ga0157372_10010868 3300013307 Bacteria 9691
147 Ga0157372_10030378 3300013307 Bacteria 5912
148 Ga0157372_10069866 3300013307 Bacteria 3950
149 Ga0157375_10295322 3300013308 Bacteria 1783
150 Ga0157375_10456362 3300013308 Bacteria 1443
151 Ga0163163_10007652 3300014325 Bacteria 9544
152 Ga0163163_10033929 3300014325 Bacteria 4940
153 Ga0163163_10205278 3300014325 Bacteria 2019
154 Ga0157379_10011651 3300014968 Bacteria 7677
155 Ga0157379_10022333 3300014968 Bacteria 5606
156 Ga0213872_10022587 3300021361 Bacteria 2897
157 Ga0213876_10001713 3300021384 Bacteria 13306
158 Ga0209148_1011829 3300025254 Bacteria 1612
159 Ga0209025_1000139 3300025294 Bacteria 188553
160 Ga0209025_1000652 3300025294 Bacteria 60620
161 Ga0209758_1000885 3300025297 Bacteria 41066
162 Ga0209050_1000073 3300025298 Bacteria 292046
163 Ga0209257_1000099 3300025304 Bacteria 255304
164 Ga0209257_1005575 3300025304 Bacteria 8750
165 Ga0207656_10001396 3300025321 Bacteria 7980
166 Ga0207656_10016451 3300025321 Bacteria 2880
167 Ga0207692_10031007 3300025898 Bacteria 2556
168 Ga0207680_10002850 3300025903 Bacteria 8091
169 Ga0207680_10030677 3300025903 Bacteria 3036
170 Ga0207680_10121277 3300025903 Bacteria 1710
171 Ga0207647_10000538 3300025904 Bacteria 30267
172 Ga0207647_10007086 3300025904 Bacteria 8131
173 Ga0207699_10000279 3300025906 Bacteria 27893
174 Ga0207705_10000315 3300025909 Bacteria 44169
175 Ga0207705_10007526 3300025909 Bacteria 8003
176 Ga0207654_10000047 3300025911 Bacteria 89940
177 Ga0207654_10000338 3300025911 Bacteria 28052
178 Ga0207707_10048129 3300025912 Bacteria 3714
179 Ga0207695_10000321 3300025913 Bacteria 116087
180 Ga0207695_10000325 3300025913 Bacteria 113706
181 Ga0207695_10001284 3300025913 Bacteria 42684
182 Ga0207695_10003676 3300025913 Bacteria 21385
183 Ga0207695_10004015 3300025913 Bacteria 20253
184 Ga0207695_10005717 3300025913 Bacteria 16388
185 Ga0207695_10010736 3300025913 Bacteria 11176
186 Ga0207695_10016068 3300025913 Bacteria 8778
187 Ga0207695_10061856 3300025913 Bacteria 3868
188 Ga0207671_10005890 3300025914 Bacteria 11124
189 Ga0207671_10011102 3300025914 Bacteria 7367
190 Ga0207671_10024424 3300025914 Bacteria 4545
191 Ga0207660_10002546 3300025917 Bacteria 11976
192 Ga0207657_10002387 3300025919 Bacteria 20320
193 Ga0207657_10003614 3300025919 Bacteria 16486
194 Ga0207649_10000590 3300025920 Bacteria 24648
195 Ga0207694_10000307 3300025924 Bacteria 46003
196 Ga0207694_10009186 3300025924 Bacteria 7459
197 Ga0207694_10032617 3300025924 Bacteria 3988
198 Ga0207694_10064837 3300025924 Bacteria 2847
199 Ga0207694_10120288 3300025924 Bacteria 2096
200 Ga0207650_10000031 3300025925 Bacteria 230128
201 Ga0207700_10000014 3300025928 Bacteria 229475
202 Ga0207664_10042790 3300025929 Bacteria 3538
203 Ga0207664_10275754 3300025929 Bacteria 1474
204 Ga0207644_10000045 3300025931 Bacteria 105495
205 Ga0207644_10049933 3300025931 Bacteria 2997
206 Ga0207644_10102079 3300025931 Bacteria 2156
207 Ga0207690_10000853 3300025932 Bacteria 19537
208 Ga0207690_10003683 3300025932 Bacteria 9121
209 Ga0207690_10173720 3300025932 Bacteria 1616
210 Ga0207706_10123140 3300025933 Bacteria 2281
211 Ga0207709_10000103 3300025935 Bacteria 131589
212 Ga0207704_10004159 3300025938 Bacteria 6600
213 Ga0207711_10000088 3300025941 Bacteria 98086
214 Ga0207711_10023291 3300025941 Bacteria 5182
215 Ga0207679_10286592 3300025945 Bacteria 1414
216 Ga0207667_10000004 3300025949 Bacteria 737718
217 Ga0207667_10002165 3300025949 Bacteria 24613
218 Ga0207667_10040310 3300025949 Bacteria 4973
219 Ga0207667_10060252 3300025949 Bacteria 3973
220 Ga0207667_10406214 3300025949 Bacteria 1386
221 Ga0207712_10013837 3300025961 Bacteria 5174
222 Ga0207668_10001162 3300025972 Bacteria 15634
223 Ga0207668_10016651 3300025972 Bacteria 4592
224 Ga0207668_10017267 3300025972 Bacteria 4517
225 Ga0207640_10001468 3300025981 Bacteria 12731
226 Ga0207640_10030196 3300025981 Bacteria 3336
227 Ga0207640_10165517 3300025981 Bacteria 1641
228 Ga0207658_10000301 3300025986 Bacteria 51412
229 Ga0207658_10006415 3300025986 Bacteria 8029
230 Ga0207677_10182744 3300026023 Bacteria 1651
231 Ga0207703_10000955 3300026035 Bacteria 27947
232 Ga0207703_10017191 3300026035 Bacteria 5643
233 Ga0207703_10174929 3300026035 Bacteria 1891
234 Ga0207639_10000642 3300026041 Bacteria 24089
235 Ga0207639_10041113 3300026041 Bacteria 3456
236 Ga0207639_10065090 3300026041 Bacteria 2829
237 Ga0207678_10002266 3300026067 Bacteria 17415
238 Ga0207702_10000022 3300026078 Bacteria 192961
239 Ga0207702_10000066 3300026078 Bacteria 117825
240 Ga0207702_10000087 3300026078 Bacteria 105856
241 Ga0207702_10001109 3300026078 Bacteria 27532
242 Ga0207641_10005123 3300026088 Bacteria 11225
243 Ga0207676_10000111 3300026095 Bacteria 73558
244 Ga0207676_10005953 3300026095 Bacteria 8601
245 Ga0207676_10011648 3300026095 Bacteria 6289
246 Ga0207674_10000004 3300026116 Bacteria 241430
247 Ga0207674_10007563 3300026116 Bacteria 12656
248 Ga0207674_10028940 3300026116 Bacteria 5840
249 Ga0207675_100180744 3300026118 Bacteria 2020
250 Ga0207683_10086015 3300026121 Bacteria 2795
251 Ga0207698_10000517 3300026142 Bacteria 22420
252 Ga0207698_10024614 3300026142 Bacteria 4229
253 Ga0207698_10047560 3300026142 Bacteria 3251
254 Ga0209974_10051663 3300027876 Bacteria 1383
255 Ga0268266_10000189 3300028379 Bacteria 109217
256 Ga0268266_10002065 3300028379 Bacteria 22244
257 Ga0268266_10109925 3300028379 Bacteria 2441
258 Ga0268266_10173356 3300028379 Bacteria 1959
259 Ga0268265_10003746 3300028380 Bacteria 10810
260 Ga0268265_10013630 3300028380 Bacteria 5528
261 Ga0268265_10016850 3300028380 Bacteria 5030
262 Ga0268265_10022477 3300028380 Bacteria 4432
263 Ga0268265_10129131 3300028380 Bacteria 2097
264 Ga0268264_10000014 3300028381 Bacteria 509962
265 Ga0268264_10000021 3300028381 Bacteria 481580
266 Ga0268264_10000178 3300028381 Bacteria 134713
267 Ga0265337_1003944 3300028556 Bacteria 6283
268 Ga0307517_10002588 3300028786 Bacteria 28810
269 Ga0265338_10004370 3300028800 Bacteria 19128
270 Ga0265338_10007553 3300028800 Bacteria 13444
271 Ga0307511_10089015 3300030521 Bacteria 2107
272 Ga0265320_10001320 3300031240 Bacteria 18140
273 Ga0265325_10000273 3300031241 Bacteria 36707
274 Ga0265340_10012699 3300031247 Bacteria 4445
275 Ga0265339_10007136 3300031249 Bacteria 7252
276 Ga0265339_10013997 3300031249 Bacteria 4849
277 Ga0265339_10021496 3300031249 Bacteria 3752
278 Ga0265327_10000462 3300031251 Bacteria 72507
279 Ga0265327_10003337 3300031251 Bacteria 15498
280 Ga0265316_10063474 3300031344 Bacteria 2864
281 Ga0307513_10000471 3300031456 Bacteria 57936
282 Ga0307513_10000636 3300031456 Bacteria 50426
283 Ga0307513_10000793 3300031456 Bacteria 45951
284 Ga0265313_10007799 3300031595 Bacteria 7231
285 Ga0265313_10029382 3300031595 Bacteria 2844
286 Ga0265313_10077103 3300031595 Bacteria 1522
287 Ga0265314_10002209 3300031711 Bacteria 20295
288 Ga0307516_10000121 3300031730 Bacteria 91748
289 Ga0307412_10000628 3300031911 Bacteria 20571
290 Ga0307414_10000175 3300032004 Bacteria 43382
291 Ga0307510_10003534 3300033180 Bacteria 18228
292 Ga0373936_0000754 3300035113 Bacteria 11359
293 Ga0373927_0042791 3300035695 Bacteria 2935
294 Ga0373927_0143655 3300035695 Bacteria 1562
295 Ga0373933_0035602 3300035724 Bacteria 2908
296 Ga0373947_0008684 3300035725 Bacteria 5847
297 Ga0373937_0257617 3300036401 Bacteria 1645
298 Ga0395899_0000052 3300037312 Bacteria 221643
299 Ga0395900_0000002 3300037418 Bacteria 671103
300 Ga0395900_0005792 3300037418 Bacteria 12909
301 Ga0395898_0016033 3300037466 Bacteria 7675
302 Ga0395898_0082634 3300037466 Bacteria 3096
303 Ga0395905_0037611 3300037471 Bacteria 4543
304 Ga0395905_0071702 3300037471 Bacteria 3248
305 Ga0395905_0085070 3300037471 Bacteria 2964
306 Ga0395905_0148560 3300037471 Bacteria 2205
307 Ga0395901_0000013 3300038443 Bacteria 375733
308 Ga0395901_0009087 3300038443 Bacteria 10061
309 Ga0395901_0029093 3300038443 Bacteria 5685
310 Ga0395901_0134979 3300038443 Bacteria 2594
311 Ga0436365_0704739 3300039437 Bacteria 1544
312 Ga0436365_1505547 3300039437 Bacteria 55840
313 Ga0436360_0385810 3300039438 Bacteria 2867
314 Ga0436360_0868397 3300039438 Bacteria 1700
315 Ga0436361_0468291 3300039447 Bacteria 1845
316 Ga0466970_0097369 3300044765 Bacteria 1601
317 Ga0451576_0000007 3300045051 Bacteria 782228
318 Ga0495638_0098204 3300046460 Bacteria 1755
319 Ga0495628_0242539 3300046516 Bacteria 1348
320 Ga0495668_0077648 3300046616 Bacteria 1823
321 Ga0495669_0086844 3300046684 Bacteria 1441
322 Ga0495672_0023154 3300047320 Bacteria 4027
323 Ga0495684_0079600 3300047471 Unclassified 2488
324 Ga0495686_0000023 3300047472 Bacteria 400457
325 Ga0495686_0064219 3300047472 Bacteria 2273
326 Ga0496100_0039259 3300048903 Bacteria 3006
327 Ga0496101_0026614 3300048904 Bacteria 4022
328 Ga0496102_0039098 3300048905 Bacteria 4285
329 Ga0496108_0082330 3300048911 Bacteria 2729
330 Ga0496109_0046992 3300048912 Bacteria 3922
331 Ga0496110_0084808 3300048913 Bacteria 2828
332 Ga0496115_0002601 3300048918 Bacteria 12956
333 Ga0496125_0063838 3300048928 Bacteria 2933
334 Ga0496126_0002612 3300048929 Bacteria 24000
335 Ga0501032_0000393 3300049569 Bacteria 36019
336 Ga0501034_0095023 3300049571 Bacteria 2977
337 Ga0501036_0319938 3300049572 Bacteria 1296
338 Ga0501037_0009450 3300049573 Bacteria 7159
339 Ga0501043_0030848 3300049579 Bacteria 4215
340 Ga0501043_0225464 3300049579 Bacteria 1449
341 Ga0501046_0069629 3300049580 Bacteria 2737
342 Ga0501047_0008722 3300049581 Bacteria 9569
343 Ga0501047_0250378 3300049581 Bacteria 1620
344 Ga0501067_0000034 3300049583 Bacteria 84068
345 Ga0501067_0040431 3300049583 Bacteria 2590
346 Ga0501073_0000013 3300049589 Bacteria 160591
347 Ga0501077_0000032 3300049593 Bacteria 69728
348 Ga0501257_015148 3300049686 Bacteria 1779
349 Ga0501080_0002052 3300049742 Bacteria 17441
350 Ga0501080_0110850 3300049742 Bacteria 2543
351 Ga0501080_0177114 3300049742 Bacteria 1964
352 Ga0501083_0018702 3300049744 Bacteria 4825
353 Ga0501083_0066548 3300049744 Bacteria 2399
354 Ga0501044_0002338 3300049823 Bacteria 21619
355 Ga0501044_0057452 3300049823 Bacteria 3993
356 nmdc:mga0n895_67682_c1 3300050512 Bacteria 3537
357 nmdc:mga0rr50_28477_c1 3300050513 Bacteria 3927
358 nmdc:mga0rr50_8605_c1 3300050513 Bacteria 6360
359 nmdc:mga08x19_132877_c1 3300050514 Bacteria 1675
360 nmdc:mga08x19_18_c1 3300050514 Bacteria 321445
361 nmdc:mga08x19_52_c1 3300050514 Bacteria 123790
362 Ga0495612_0087908 3300053078 Bacteria 1312
363 Ga0500643_000256 3300053087 Bacteria 48356
364 Ga0500641_0011083 3300053096 Bacteria 3269
365 Ga0500645_008812 3300053730 Bacteria 3419

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049744 Ga0501083_0066548 Ga0501083_0066548_1382_2377 321
2 3300047472 Ga0495686_0064219 Ga0495686_0064219_453_1556 352
3 3300026118 Ga0207675_100180744 Ga0207675_1001807442 355
4 3300005616 Ga0068852_100199785 Ga0068852_1001997852 357
5 3300025949 Ga0207667_10060252 Ga0207667_100602522 357
6 3300026142 Ga0207698_10047560 Ga0207698_100475603 357
7 3300039438 Ga0436360_0385810 Ga0436360_0385810_760_1923 357
8 3300031456 Ga0307513_10000471 Ga0307513_1000047133 362
9 3300031730 Ga0307516_10000121 Ga0307516_1000012135 363
10 3300039437 Ga0436365_1505547 Ga0436365_1505547_2385_3521 363
11 3300006847 Ga0075431_100377061 Ga0075431_1003770612 364
12 3300025254 Ga0209148_1011829 Ga0209148_10118292 364
13 3300005355 Ga0070671_100014942 Ga0070671_1000149424 365
14 3300025931 Ga0207644_10049933 Ga0207644_100499333 365
15 3300001989 JGI24739J22299_10019942 JGI24739J22299_100199422 366
16 3300005366 Ga0070659_100049667 Ga0070659_1000496674 366
17 3300005539 Ga0068853_100026199 Ga0068853_1000261995 366
18 3300005548 Ga0070665_100000194 Ga0070665_100000194103 366
19 3300013104 Ga0157370_10053072 Ga0157370_100530724 366
20 3300025909 Ga0207705_10007526 Ga0207705_100075265 366
21 3300025912 Ga0207707_10048129 Ga0207707_100481293 366
22 3300025913 Ga0207695_10005717 Ga0207695_100057176 366
23 3300025917 Ga0207660_10002546 Ga0207660_100025463 366
24 3300025919 Ga0207657_10003614 Ga0207657_1000361411 366
25 3300025932 Ga0207690_10173720 Ga0207690_101737201 366
26 3300025949 Ga0207667_10040310 Ga0207667_100403102 366
27 3300028379 Ga0268266_10000189 Ga0268266_1000018995 366
28 3300048918 Ga0496115_0002601 Ga0496115_0002601_7085_8251 366
29 3300035113 Ga0373936_0000754 Ga0373936_0000754_9342_10508 367
30 3300037471 Ga0395905_0071702 Ga0395905_0071702_338_1504 367
31 3300009551 Ga0105238_10005419 Ga0105238_100054199 368
32 3300021361 Ga0213872_10022587 Ga0213872_100225874 368
33 3300025924 Ga0207694_10032617 Ga0207694_100326172 368
34 3300039447 Ga0436361_0468291 Ga0436361_0468291_74_1240 368
35 iso_pu_bacteria 2643221598 2644001711 369
36 iso_pu_bacteria 2643221614 2644087890 369
37 iso_pu_bacteria 2643221661 2644345495 369
38 iso_pu_bacteria 2643221666 2644367246 369
39 iso_pu_bacteria 2643221672 2644401325 369
40 iso_pu_bacteria 2842733646 2842738385 369
41 iso_pu_bacteria 2904541872 2904544633 369
42 iso_pu_bacteria 2929160207 2929163695 369
43 iso_pu_bacteria 2643221605 2644038487 370
44 iso_pu_bacteria 2929199973 2929201177 370
45 iso_pu_bacteria 8055909800 8055909938 370
46 3300005347 Ga0070668_100000889 Ga0070668_1000008894 371
47 3300005347 Ga0070668_100289919 Ga0070668_1002899191 371
48 3300005353 Ga0070669_100100776 Ga0070669_1001007761 371
49 3300005367 Ga0070667_100013172 Ga0070667_1000131721 371
50 3300005617 Ga0068859_100038452 Ga0068859_1000384525 371
51 3300005843 Ga0068860_100000051 Ga0068860_10000005150 371
52 3300005844 Ga0068862_100002765 Ga0068862_1000027654 371
53 3300005844 Ga0068862_100068027 Ga0068862_1000680272 371
54 3300006931 Ga0097620_100038450 Ga0097620_1000384505 371
55 3300025972 Ga0207668_10017267 Ga0207668_100172673 371
56 3300025986 Ga0207658_10006415 Ga0207658_1000641510 371
57 3300028380 Ga0268265_10003746 Ga0268265_100037464 371
58 3300028380 Ga0268265_10013630 Ga0268265_100136303 371
59 3300028381 Ga0268264_10000021 Ga0268264_10000021388 371
60 3300039437 Ga0436365_0704739 Ga0436365_0704739_107_1267 371
61 3300049686 Ga0501257_015148 Ga0501257_015148_87_1247 371
62 3300003187 JGI25151J46595_10000985 JGI25151J46595_100009855 373
63 3300003187 JGI25151J46595_10030897 JGI25151J46595_100308972 373
64 3300003791 Ga0055530_10000039 Ga0055530_10000039108 373
65 3300003794 Ga0055531_10003500 Ga0055531_100035009 373
66 3300004625 Ga0055543_1004683 Ga0055543_10046832 373
67 3300005262 Ga0065165_1000950 Ga0065165_100095032 373
68 3300005262 Ga0065165_1013294 Ga0065165_10132944 373
69 3300005331 Ga0070670_100000065 Ga0070670_10000006581 373
70 3300005335 Ga0070666_10026865 Ga0070666_100268654 373
71 3300005335 Ga0070666_10071839 Ga0070666_100718392 373
72 3300005338 Ga0068868_100189305 Ga0068868_1001893052 373
73 3300005341 Ga0070691_10000084 Ga0070691_100000847 373
74 3300005341 Ga0070691_10007251 Ga0070691_100072512 373
75 3300005347 Ga0070668_100001805 Ga0070668_1000018052 373
76 3300005347 Ga0070668_100003972 Ga0070668_1000039724 373
77 3300005355 Ga0070671_100070675 Ga0070671_1000706752 373
78 3300005364 Ga0070673_100034763 Ga0070673_1000347631 373
79 3300005366 Ga0070659_100013998 Ga0070659_1000139984 373
80 3300005367 Ga0070667_100000317 Ga0070667_10000031742 373
81 3300005434 Ga0070709_10000264 Ga0070709_100002646 373
82 3300005435 Ga0070714_100071776 Ga0070714_1000717763 373
83 3300005435 Ga0070714_100209603 Ga0070714_1002096032 373
84 3300005436 Ga0070713_100000007 Ga0070713_10000000780 373
85 3300005437 Ga0070710_10011449 Ga0070710_100114492 373
86 3300005439 Ga0070711_100022454 Ga0070711_1000224543 373
87 3300005440 Ga0070705_100063772 Ga0070705_1000637722 373
88 3300005444 Ga0070694_100089585 Ga0070694_1000895852 373
89 3300005456 Ga0070678_100054133 Ga0070678_1000541332 373
90 3300005458 Ga0070681_10042454 Ga0070681_100424543 373
91 3300005466 Ga0070685_10098269 Ga0070685_100982692 373
92 3300005536 Ga0070697_100000719 Ga0070697_10000071910 373
93 3300005539 Ga0068853_100000192 Ga0068853_1000001929 373
94 3300005544 Ga0070686_100127762 Ga0070686_1001277622 373
95 3300005545 Ga0070695_100014490 Ga0070695_1000144904 373
96 3300005546 Ga0070696_100013366 Ga0070696_1000133662 373
97 3300005547 Ga0070693_100008900 Ga0070693_1000089002 373
98 3300005548 Ga0070665_100004019 Ga0070665_1000040195 373
99 3300005548 Ga0070665_100081129 Ga0070665_1000811292 373
100 3300005548 Ga0070665_100197033 Ga0070665_1001970332 373
101 3300005549 Ga0070704_100037213 Ga0070704_1000372132 373
102 3300005549 Ga0070704_100076583 Ga0070704_1000765832 373
103 3300005563 Ga0068855_100083317 Ga0068855_1000833173 373
104 3300005563 Ga0068855_100286714 Ga0068855_1002867142 373
105 3300005577 Ga0068857_100005648 Ga0068857_1000056483 373
106 3300005577 Ga0068857_100070830 Ga0068857_1000708303 373
107 3300005578 Ga0068854_100017259 Ga0068854_1000172593 373
108 3300005614 Ga0068856_100003631 Ga0068856_1000036316 373
109 3300005616 Ga0068852_100005220 Ga0068852_1000052207 373
110 3300005617 Ga0068859_100006638 Ga0068859_1000066387 373
111 3300005618 Ga0068864_100000224 Ga0068864_10000022436 373
112 3300005618 Ga0068864_100008998 Ga0068864_1000089986 373
113 3300005618 Ga0068864_100012984 Ga0068864_1000129842 373
114 3300005719 Ga0068861_100072396 Ga0068861_1000723962 373
115 3300005841 Ga0068863_100000061 Ga0068863_10000006191 373
116 3300005842 Ga0068858_100000382 Ga0068858_1000003824 373
117 3300005842 Ga0068858_100045125 Ga0068858_1000451252 373
118 3300005843 Ga0068860_100000027 Ga0068860_100000027211 373
119 3300005843 Ga0068860_100000123 Ga0068860_10000012328 373
120 3300005844 Ga0068862_100000202 Ga0068862_10000020213 373
121 3300005844 Ga0068862_100001965 Ga0068862_1000019653 373
122 3300006871 Ga0075434_100101920 Ga0075434_1001019202 373
123 3300006914 Ga0075436_100000100 Ga0075436_10000010018 373
124 3300006914 Ga0075436_100121604 Ga0075436_1001216042 373
125 3300006931 Ga0097620_100006638 Ga0097620_1000066387 373
126 3300007076 Ga0075435_100012381 Ga0075435_1000123815 373
127 3300007076 Ga0075435_100019549 Ga0075435_1000195492 373
128 3300009011 Ga0105251_10072326 Ga0105251_100723262 373
129 3300009093 Ga0105240_10002315 Ga0105240_100023154 373
130 3300009093 Ga0105240_10005185 Ga0105240_1000518513 373
131 3300009093 Ga0105240_10029544 Ga0105240_100295444 373
132 3300009093 Ga0105240_10067181 Ga0105240_100671811 373
133 3300009093 Ga0105240_10136356 Ga0105240_101363562 373
134 3300009093 Ga0105240_10161560 Ga0105240_101615602 373
135 3300009147 Ga0114129_10075188 Ga0114129_100751883 373
136 3300009148 Ga0105243_10000101 Ga0105243_1000010145 373
137 3300009174 Ga0105241_10003911 Ga0105241_100039113 373
138 3300009177 Ga0105248_10000176 Ga0105248_1000017654 373
139 3300009177 Ga0105248_10048347 Ga0105248_100483472 373
140 3300009545 Ga0105237_10000842 Ga0105237_1000084213 373
141 3300009551 Ga0105238_10000606 Ga0105238_1000060641 373
142 3300009553 Ga0105249_10009123 Ga0105249_100091233 373
143 3300009553 Ga0105249_10129100 Ga0105249_101291003 373
144 3300009553 Ga0105249_10315856 Ga0105249_103158561 373
145 3300013100 Ga0157373_10001012 Ga0157373_1000101213 373
146 3300013104 Ga0157370_10001478 Ga0157370_1000147814 373
147 3300013105 Ga0157369_10065124 Ga0157369_100651245 373
148 3300013307 Ga0157372_10030378 Ga0157372_100303786 373
149 3300013307 Ga0157372_10069866 Ga0157372_100698662 373
150 3300013308 Ga0157375_10456362 Ga0157375_104563621 373
151 3300014325 Ga0163163_10033929 Ga0163163_100339293 373
152 3300014968 Ga0157379_10011651 Ga0157379_100116515 373
153 3300014968 Ga0157379_10022333 Ga0157379_100223332 373
154 3300021384 Ga0213876_10001713 Ga0213876_1000171310 373
155 3300025294 Ga0209025_1000139 Ga0209025_1000139118 373
156 3300025294 Ga0209025_1000652 Ga0209025_100065243 373
157 3300025297 Ga0209758_1000885 Ga0209758_10008859 373
158 3300025298 Ga0209050_1000073 Ga0209050_1000073161 373
159 3300025304 Ga0209257_1000099 Ga0209257_1000099135 373
160 3300025304 Ga0209257_1005575 Ga0209257_10055753 373
161 3300025898 Ga0207692_10031007 Ga0207692_100310072 373
162 3300025903 Ga0207680_10002850 Ga0207680_100028508 373
163 3300025903 Ga0207680_10030677 Ga0207680_100306772 373
164 3300025903 Ga0207680_10121277 Ga0207680_101212772 373
165 3300025906 Ga0207699_10000279 Ga0207699_100002796 373
166 3300025913 Ga0207695_10000321 Ga0207695_1000032124 373
167 3300025913 Ga0207695_10001284 Ga0207695_1000128416 373
168 3300025913 Ga0207695_10003676 Ga0207695_100036764 373
169 3300025913 Ga0207695_10010736 Ga0207695_100107366 373
170 3300025913 Ga0207695_10016068 Ga0207695_100160683 373
171 3300025913 Ga0207695_10061856 Ga0207695_100618565 373
172 3300025914 Ga0207671_10024424 Ga0207671_100244242 373
173 3300025924 Ga0207694_10120288 Ga0207694_101202881 373
174 3300025925 Ga0207650_10000031 Ga0207650_1000003196 373
175 3300025928 Ga0207700_10000014 Ga0207700_10000014143 373
176 3300025929 Ga0207664_10275754 Ga0207664_102757542 373
177 3300025931 Ga0207644_10102079 Ga0207644_101020791 373
178 3300025932 Ga0207690_10003683 Ga0207690_100036834 373
179 3300025935 Ga0207709_10000103 Ga0207709_1000010356 373
180 3300025941 Ga0207711_10000088 Ga0207711_1000008817 373
181 3300025941 Ga0207711_10023291 Ga0207711_100232912 373
182 3300025949 Ga0207667_10002165 Ga0207667_100021657 373
183 3300025949 Ga0207667_10406214 Ga0207667_104062141 373
184 3300025961 Ga0207712_10013837 Ga0207712_100138375 373
185 3300025972 Ga0207668_10001162 Ga0207668_100011628 373
186 3300025972 Ga0207668_10016651 Ga0207668_100166512 373
187 3300025981 Ga0207640_10165517 Ga0207640_101655172 373
188 3300025986 Ga0207658_10000301 Ga0207658_1000030126 373
189 3300026023 Ga0207677_10182744 Ga0207677_101827442 373
190 3300026035 Ga0207703_10000955 Ga0207703_1000095523 373
191 3300026035 Ga0207703_10017191 Ga0207703_100171915 373
192 3300026041 Ga0207639_10041113 Ga0207639_100411133 373
193 3300026041 Ga0207639_10065090 Ga0207639_100650902 373
194 3300026078 Ga0207702_10000066 Ga0207702_1000006626 373
195 3300026078 Ga0207702_10001109 Ga0207702_100011095 373
196 3300026088 Ga0207641_10005123 Ga0207641_100051232 373
197 3300026095 Ga0207676_10000111 Ga0207676_1000011166 373
198 3300026095 Ga0207676_10005953 Ga0207676_100059535 373
199 3300026095 Ga0207676_10011648 Ga0207676_100116486 373
200 3300026116 Ga0207674_10000004 Ga0207674_1000000484 373
201 3300026121 Ga0207683_10086015 Ga0207683_100860154 373
202 3300028379 Ga0268266_10002065 Ga0268266_1000206515 373
203 3300028379 Ga0268266_10109925 Ga0268266_101099252 373
204 3300028379 Ga0268266_10173356 Ga0268266_101733562 373
205 3300028380 Ga0268265_10016850 Ga0268265_100168504 373
206 3300028380 Ga0268265_10022477 Ga0268265_100224773 373
207 3300028380 Ga0268265_10129131 Ga0268265_101291312 373
208 3300028381 Ga0268264_10000014 Ga0268264_10000014377 373
209 3300028381 Ga0268264_10000178 Ga0268264_1000017868 373
210 3300028556 Ga0265337_1003944 Ga0265337_10039442 373
211 3300028786 Ga0307517_10002588 Ga0307517_1000258816 373
212 3300028800 Ga0265338_10004370 Ga0265338_1000437010 373
213 3300028800 Ga0265338_10007553 Ga0265338_100075538 373
214 3300031240 Ga0265320_10001320 Ga0265320_1000132017 373
215 3300031241 Ga0265325_10000273 Ga0265325_100002734 373
216 3300031247 Ga0265340_10012699 Ga0265340_100126992 373
217 3300031249 Ga0265339_10007136 Ga0265339_100071363 373
218 3300031249 Ga0265339_10013997 Ga0265339_100139972 373
219 3300031249 Ga0265339_10021496 Ga0265339_100214962 373
220 3300031251 Ga0265327_10000462 Ga0265327_1000046219 373
221 3300031251 Ga0265327_10003337 Ga0265327_100033372 373
222 3300031344 Ga0265316_10063474 Ga0265316_100634742 373
223 3300031456 Ga0307513_10000636 Ga0307513_1000063611 373
224 3300031456 Ga0307513_10000793 Ga0307513_1000079329 373
225 3300031595 Ga0265313_10007799 Ga0265313_100077991 373
226 3300031595 Ga0265313_10029382 Ga0265313_100293822 373
227 3300031595 Ga0265313_10077103 Ga0265313_100771032 373
228 3300031711 Ga0265314_10002209 Ga0265314_100022095 373
229 3300033180 Ga0307510_10003534 Ga0307510_100035345 373
230 3300035695 Ga0373927_0042791 Ga0373927_0042791_235_1398 373
231 3300035724 Ga0373933_0035602 Ga0373933_0035602_986_2152 373
232 3300035725 Ga0373947_0008684 Ga0373947_0008684_4489_5655 373
233 3300036401 Ga0373937_0257617 Ga0373937_0257617_309_1472 373
234 3300037312 Ga0395899_0000052 Ga0395899_0000052_123439_124605 373
235 3300037418 Ga0395900_0000002 Ga0395900_0000002_577862_579028 373
236 3300037418 Ga0395900_0005792 Ga0395900_0005792_4065_5231 373
237 3300037466 Ga0395898_0016033 Ga0395898_0016033_3025_4191 373
238 3300037471 Ga0395905_0037611 Ga0395905_0037611_1900_3066 373
239 3300038443 Ga0395901_0000013 Ga0395901_0000013_124757_125923 373
240 3300038443 Ga0395901_0029093 Ga0395901_0029093_805_1971 373
241 3300038443 Ga0395901_0134979 Ga0395901_0134979_719_1885 373
242 3300039438 Ga0436360_0868397 Ga0436360_0868397_350_1516 373
243 3300044765 Ga0466970_0097369 Ga0466970_0097369_251_1417 373
244 3300045051 Ga0451576_0000007 Ga0451576_0000007_325652_326818 373
245 3300046460 Ga0495638_0098204 Ga0495638_0098204_369_1532 373
246 3300046516 Ga0495628_0242539 Ga0495628_0242539_24_1187 373
247 3300046616 Ga0495668_0077648 Ga0495668_0077648_360_1526 373
248 3300046684 Ga0495669_0086844 Ga0495669_0086844_29_1195 373
249 3300047320 Ga0495672_0023154 Ga0495672_0023154_1474_2640 373
250 3300047471 Ga0495684_0079600 Ga0495684_0079600_328_1491 373
251 3300047472 Ga0495686_0000023 Ga0495686_0000023_283554_284720 373
252 3300048928 Ga0496125_0063838 Ga0496125_0063838_583_1749 373
253 3300048929 Ga0496126_0002612 Ga0496126_0002612_2895_4061 373
254 3300049571 Ga0501034_0095023 Ga0501034_0095023_1565_2731 373
255 3300049579 Ga0501043_0225464 Ga0501043_0225464_103_1269 373
256 3300049580 Ga0501046_0069629 Ga0501046_0069629_871_2037 373
257 3300049581 Ga0501047_0250378 Ga0501047_0250378_400_1566 373
258 3300049583 Ga0501067_0040431 Ga0501067_0040431_1154_2320 373
259 3300049742 Ga0501080_0110850 Ga0501080_0110850_329_1495 373
260 3300049742 Ga0501080_0177114 Ga0501080_0177114_370_1536 373
261 3300049744 Ga0501083_0018702 Ga0501083_0018702_1635_2801 373
262 3300050512 nmdc:mga0n895_67682_c1 nmdc:mga0n895_67682_c1_997_2163 373
263 3300050513 nmdc:mga0rr50_28477_c1 nmdc:mga0rr50_28477_c1_2337_3500 373
264 3300050513 nmdc:mga0rr50_8605_c1 nmdc:mga0rr50_8605_c1_2634_3800 373
265 3300050514 nmdc:mga08x19_132877_c1 nmdc:mga08x19_132877_c1_306_1469 373
266 3300050514 nmdc:mga08x19_18_c1 nmdc:mga08x19_18_c1_116541_117704 373
267 3300050514 nmdc:mga08x19_52_c1 nmdc:mga08x19_52_c1_23740_24906 373
268 3300053078 Ga0495612_0087908 Ga0495612_0087908_81_1247 373
269 3300053096 Ga0500641_0011083 Ga0500641_0011083_294_1457 373
270 3300005355 Ga0070671_100000065 Ga0070671_10000006558 374
271 3300005539 Ga0068853_100079249 Ga0068853_1000792493 374
272 3300025931 Ga0207644_10000045 Ga0207644_1000004538 374
273 3300027876 Ga0209974_10051663 Ga0209974_100516632 374
274 3300049569 Ga0501032_0000393 Ga0501032_0000393_12794_13963 374
275 3300049572 Ga0501036_0319938 Ga0501036_0319938_109_1278 374
276 3300049573 Ga0501037_0009450 Ga0501037_0009450_2230_3399 374
277 3300049579 Ga0501043_0030848 Ga0501043_0030848_2668_3837 374
278 3300049583 Ga0501067_0000034 Ga0501067_0000034_5319_6488 374
279 3300049589 Ga0501073_0000013 Ga0501073_0000013_85715_86884 374
280 3300049593 Ga0501077_0000032 Ga0501077_0000032_9420_10589 374
281 3300049742 Ga0501080_0002052 Ga0501080_0002052_10007_11176 374
282 3300049823 Ga0501044_0002338 Ga0501044_0002338_1772_2941 374
283 3300053087 Ga0500643_000256 Ga0500643_000256_6071_7234 374
284 3300005435 Ga0070714_100019853 Ga0070714_1000198534 375
285 3300005436 Ga0070713_100003564 Ga0070713_1000035649 375
286 3300006028 Ga0070717_10071318 Ga0070717_100713183 375
287 3300009545 Ga0105237_10029683 Ga0105237_100296832 375
288 3300009551 Ga0105238_10071383 Ga0105238_100713831 375
289 3300025924 Ga0207694_10064837 Ga0207694_100648371 375
290 3300025929 Ga0207664_10042790 Ga0207664_100427902 375
291 3300025938 Ga0207704_10004159 Ga0207704_100041593 375
292 3300035695 Ga0373927_0143655 Ga0373927_0143655_112_1320 375
293 3300013308 Ga0157375_10295322 Ga0157375_102953222 376
294 3300014325 Ga0163163_10205278 Ga0163163_102052782 376
295 3300030521 Ga0307511_10089015 Ga0307511_100890152 376
296 3300037471 Ga0395905_0085070 Ga0395905_0085070_1429_2622 376
297 3300037471 Ga0395905_0148560 Ga0395905_0148560_620_1813 376
298 3300048903 Ga0496100_0039259 Ga0496100_0039259_428_1621 376
299 3300048904 Ga0496101_0026614 Ga0496101_0026614_546_1739 376
300 3300048905 Ga0496102_0039098 Ga0496102_0039098_1503_2696 376
301 3300048911 Ga0496108_0082330 Ga0496108_0082330_159_1352 376
302 3300048912 Ga0496109_0046992 Ga0496109_0046992_1372_2565 376
303 3300048913 Ga0496110_0084808 Ga0496110_0084808_1501_2694 376
304 3300049581 Ga0501047_0008722 Ga0501047_0008722_5814_7025 376
305 3300053730 Ga0500645_008812 Ga0500645_008812_1314_2510 376
306 3300049823 Ga0501044_0057452 Ga0501044_0057452_2170_3354 377
307 iso_pu_bacteria 2808606401 2809064020 382
308 iso_pu_bacteria 2808606404 2809079988 382
309 iso_pu_bacteria 2808606405 2809084353 382
310 iso_pu_bacteria 2880518877 2880522839 382
311 3300001979 JGI24740J21852_10023183 JGI24740J21852_100231832 385
312 3300001989 JGI24739J22299_10024333 JGI24739J22299_100243332 385
313 3300005455 Ga0070663_100041466 Ga0070663_1000414662 385
314 3300005457 Ga0070662_100071778 Ga0070662_1000717782 385
315 3300005539 Ga0068853_100095431 Ga0068853_1000954311 385
316 3300005563 Ga0068855_100024133 Ga0068855_1000241337 385
317 3300005577 Ga0068857_100244150 Ga0068857_1002441501 385
318 3300005578 Ga0068854_100063772 Ga0068854_1000637722 385
319 3300005614 Ga0068856_100016399 Ga0068856_1000163997 385
320 3300005616 Ga0068852_100001877 Ga0068852_1000018778 385
321 3300005834 Ga0068851_10004246 Ga0068851_100042464 385
322 3300009093 Ga0105240_10020532 Ga0105240_100205329 385
323 3300009174 Ga0105241_10007359 Ga0105241_100073596 385
324 3300009545 Ga0105237_10322415 Ga0105237_103224151 385
325 3300009551 Ga0105238_10018065 Ga0105238_100180654 385
326 3300010375 Ga0105239_10021184 Ga0105239_100211844 385
327 3300025321 Ga0207656_10016451 Ga0207656_100164512 385
328 3300025904 Ga0207647_10000538 Ga0207647_1000053823 385
329 3300025911 Ga0207654_10000047 Ga0207654_1000004772 385
330 3300025913 Ga0207695_10000325 Ga0207695_1000032593 385
331 3300025914 Ga0207671_10011102 Ga0207671_100111026 385
332 3300025924 Ga0207694_10000307 Ga0207694_1000030736 385
333 3300025933 Ga0207706_10123140 Ga0207706_101231402 385
334 3300026078 Ga0207702_10000022 Ga0207702_10000022158 385
335 3300026116 Ga0207674_10028940 Ga0207674_100289402 385
336 3300026142 Ga0207698_10024614 Ga0207698_100246143 385
337 3300037466 Ga0395898_0082634 Ga0395898_0082634_163_1347 385
338 3300038443 Ga0395901_0009087 Ga0395901_0009087_219_1403 385
339 3300001915 JGI24741J21665_1000267 JGI24741J21665_100026714 386
340 3300001979 JGI24740J21852_10000586 JGI24740J21852_1000058612 386
341 3300001990 JGI24737J22298_10002355 JGI24737J22298_100023552 386
342 3300005327 Ga0070658_10000524 Ga0070658_1000052414 386
343 3300005339 Ga0070660_100024182 Ga0070660_1000241822 386
344 3300005344 Ga0070661_100001942 Ga0070661_10000194212 386
345 3300005366 Ga0070659_100020953 Ga0070659_1000209532 386
346 3300005455 Ga0070663_100009064 Ga0070663_1000090642 386
347 3300005563 Ga0068855_100033239 Ga0068855_1000332393 386
348 3300005564 Ga0070664_100005038 Ga0070664_1000050382 386
349 3300005577 Ga0068857_100034060 Ga0068857_1000340603 386
350 3300005578 Ga0068854_100031875 Ga0068854_1000318753 386
351 3300005834 Ga0068851_10009261 Ga0068851_100092612 386
352 3300005842 Ga0068858_100001592 Ga0068858_10000159217 386
353 3300009174 Ga0105241_10002069 Ga0105241_1000206913 386
354 3300009545 Ga0105237_10009887 Ga0105237_100098877 386
355 3300013100 Ga0157373_10014579 Ga0157373_100145793 386
356 3300013102 Ga0157371_10000111 Ga0157371_1000011140 386
357 3300013307 Ga0157372_10010868 Ga0157372_100108688 386
358 3300014325 Ga0163163_10007652 Ga0163163_100076526 386
359 3300025321 Ga0207656_10001396 Ga0207656_100013963 386
360 3300025904 Ga0207647_10007086 Ga0207647_100070869 386
361 3300025909 Ga0207705_10000315 Ga0207705_1000031516 386
362 3300025911 Ga0207654_10000338 Ga0207654_100003389 386
363 3300025913 Ga0207695_10004015 Ga0207695_100040159 386
364 3300025914 Ga0207671_10005890 Ga0207671_100058907 386
365 3300025919 Ga0207657_10002387 Ga0207657_100023879 386
366 3300025920 Ga0207649_10000590 Ga0207649_1000059020 386
367 3300025924 Ga0207694_10009186 Ga0207694_100091866 386
368 3300025932 Ga0207690_10000853 Ga0207690_100008539 386
369 3300025945 Ga0207679_10286592 Ga0207679_102865921 386
370 3300025949 Ga0207667_10000004 Ga0207667_10000004598 386
371 3300025981 Ga0207640_10001468 Ga0207640_100014686 386
372 3300025981 Ga0207640_10030196 Ga0207640_100301962 386
373 3300026035 Ga0207703_10174929 Ga0207703_101749292 386
374 3300026041 Ga0207639_10000642 Ga0207639_100006422 386
375 3300026067 Ga0207678_10002266 Ga0207678_100022666 386
376 3300026078 Ga0207702_10000087 Ga0207702_1000008711 386
377 3300026116 Ga0207674_10007563 Ga0207674_100075639 386
378 3300026142 Ga0207698_10000517 Ga0207698_100005177 386
379 3300031911 Ga0307412_10000628 Ga0307412_100006286 386
380 3300032004 Ga0307414_10000175 Ga0307414_1000017530 386

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00441

Acyl-CoA_dh_1

Acyl-CoA dehydrogenase, C-terminal domain

235

384

0.99

PF08028

Acyl-CoA_dh_2

Acyl-CoA dehydrogenase, C-terminal domain

250

373

0.93

PF02770

Acyl-CoA_dh_M

Acyl-CoA dehydrogenase, middle domain

135

223

0.88

PF02771

Acyl-CoA_dh_N

Acyl-CoA dehydrogenase, N-terminal domain

13

128

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
4hr3-assembly1.cif.gz_A structure of a putative acyl-coa dehydrogenase from mycobacterium abscessus 0.9154 6 380
6fah-assembly1.cif.gz_C molecular basis of the flavin-based electron-bifurcating caffeyl-coa reductase reaction 0.9036 6 382
2vig-assembly2.cif.gz_H crystal structure of human short-chain acyl coa dehydrogenase 0.9021 8 380
2wbi-assembly1.cif.gz_A-2 crystal structure of human acyl-coa dehydrogenase 11 0.9017 9 380
2vig-assembly1.cif.gz_B crystal structure of human short-chain acyl coa dehydrogenase 0.9007 8 380
ID Description Score Start End Superfamily
af_A0A0K3AQR2_269_362_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9727 237 325 1.20.140.10
af_Q9VDT1_256_405_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9576 237 380 1.20.140.10
af_P0A9U8_233_383_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9576 241 380 1.20.140.10
2dvlA03 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9569 232 379 1.20.140.10
af_Q8K370_905_1064_1.20.140.10 Mainly Alpha;Up-down Bundle;Butyryl-CoA Dehydrogenase, subunit A; domain 3;Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.9567 232 380 1.20.140.10
ID Description Score Start End GO Terms
AF-A0A535L0D3-F1-model_v4 Acyl-CoA dehydrogenase 0.9745 225 325 GO:0003995
AF-A0A521X181-F1-model_v4 Acyl-CoA dehydrogenase 0.9596 167 380 GO:0003995
GO:0005737
GO:0033539
AF-A0A351SL69-F1-model_v4 Acyl-CoA dehydrogenase 0.958 132 380 GO:0003995
GO:0005737
GO:0033539
AF-A0A3S2AM29-F1-model_v4 Acyl-CoA dehydrogenase 0.9574 217 382 GO:0003995
AF-A0A2E3PX44-F1-model_v4 Acyl-CoA dehydrogenase 0.957 253 380 GO:0003995

Feature Viewer

pLDDT pTM Quality
88.61 0.89 High
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Predicted Structure (AlphaFold2)

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