F427884

General Info

Members Datasets Scaffolds Average Seq Length
377 245 306 201

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3006486233|3006488607
Length 231
Sequence GAVTGPAAAAITAAAPAADGTAADGTAAESRPGNLPKQARSRVTRRHLLDAAITCLAEHGWAGSTVAVVAERAGVSRGAAQHHFPTREDLFTAAVEFMAEERSAALPALLRESTGAGGAAGSGRAAVVEALVDLYTGPMFRAALQLWVAASHEEQLRARVAGLEARLGRETHRMAVQLLGADESVPGVRETVQGFLDMARGLGLANVLTDDTARRARVVAQWTRILDATLG

Samples

Sample ID Description Type Environment
1 2547132424 Nocardia nova SH22a Isolate Unclassified
2 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
3 2554235005 Streptomyces violaceusniger SPC6 Isolate Rhizosphere
4 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
5 2643221576 Nocardioides sp. Root614 Isolate Unclassified
6 2643221587 Streptomyces sp. Root66D1 Isolate Unclassified
7 2643221590 Nocardioides sp. Root682 Isolate Unclassified
8 2643221617 Nocardioides sp. Root79 Isolate Unclassified
9 2643221620 Nocardioides sp. Root240 Isolate Unclassified
10 2643221670 Streptomyces sp. Root431 Isolate Unclassified
11 2643221677 Streptomyces sp. Root1304 Isolate Unclassified
12 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
13 2643221692 Nocardia sp. Root136 Isolate Unclassified
14 2643221696 Nocardioides sp. Root140 Isolate Unclassified
15 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
16 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
17 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
18 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
19 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
20 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
21 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
22 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
23 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
24 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
25 2795385472 Herbihabitans rhizosphaerae DSM 101727 Isolate Rhizosphere
26 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
27 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
28 2808606448 Streptomyces sp. 193411 Isolate Unclassified
29 2808606982 Streptomyces sp. SLBN-118 Isolate Unclassified
30 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
31 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
32 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
33 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
34 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
35 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
36 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
37 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
38 2867369537 Streptomyces sp. Z26 Isolate Unclassified
39 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
40 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
41 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
42 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
43 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
44 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
45 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
46 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
47 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
48 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
49 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
50 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
51 2922554459 Rhodococcus sp. 66b Isolate Unclassified
52 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
53 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
54 2935390628 Streptomyces sp. PvR034 Isolate Rhizosphere
55 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
56 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
57 2990088156 Streptomyces albidus CAP 215 Isolate Unclassified
58 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
59 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
60 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
61 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
62 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
63 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
64 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
65 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
66 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
67 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
68 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
69 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
70 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
71 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
72 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
73 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
74 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
75 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
76 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
77 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
78 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
79 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
80 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
81 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
82 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
83 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
84 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
85 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
86 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
87 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
88 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
89 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
90 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
91 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
92 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
93 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
94 3300009984 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_127 metaG Metagenome Rhizosphere
95 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
96 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
97 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
98 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
99 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
100 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
101 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
102 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
103 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
104 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
105 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
120 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
121 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
122 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
123 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
124 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
125 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
126 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
127 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
128 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
129 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
130 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
131 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
132 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
133 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
134 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
135 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
136 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
137 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
138 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
139 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
140 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
141 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
142 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
143 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
144 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
145 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
146 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
147 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
148 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
149 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
150 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
151 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
152 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
153 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
154 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
155 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
156 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
157 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
158 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
159 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
160 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
161 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
162 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
163 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
164 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
165 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
166 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
167 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
168 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
169 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
170 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
171 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
172 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
173 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
174 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
175 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
176 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
177 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
178 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
179 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
180 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
181 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
182 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
183 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
184 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
186 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
188 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
189 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
190 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
191 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
192 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
193 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
194 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
195 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
196 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
197 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
198 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
199 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
200 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
201 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
202 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
203 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
205 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
206 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
207 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
208 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
209 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
210 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
211 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
212 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
213 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
214 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
215 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
216 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
217 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
218 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
219 3300053106 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 endosphere Metagenome Endosphere
220 3300053107 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 endosphere Metagenome Endosphere
221 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
222 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
223 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
224 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
225 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
226 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
227 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
228 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
229 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
230 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
231 3300053732 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 endosphere Metagenome Endosphere
232 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
233 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
234 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
235 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
236 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
237 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
238 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere
239 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
240 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
241 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
242 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
243 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
244 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
245 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 80.11
Metatranscriptomes 1.06
Isolates 18.83

Biome Distribution

Category Percentage (%)
Aerial Root 0.27
Bulb 0
Endosphere 23.34
Nodule 0
Rhizoplane 1.86
Rhizosphere 57.56
Stem 0
Stem Tuber 0
Unclassified 16.98

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10047797 3300003316 Bacteria 5473
2 rootH2_10054733 3300003320 Bacteria 4008
3 rootL2_10004468 3300003322 Bacteria 8551
4 rootH1_10034183 3300003323 Bacteria 2868
5 rootH1_10034196 3300003323 Bacteria 7762
6 Ga0006562J51391_1105644 3300003578 Bacteria 1798
7 Ga0006562J51391_1116078 3300003578 Bacteria 12055
8 Ga0006562J51391_1116086 3300003578 Bacteria 2750
9 Ga0070683_100756425 3300005329 Bacteria 931
10 Ga0070689_100359263 3300005340 Bacteria 1223
11 Ga0070675_100472222 3300005354 Bacteria 1127
12 Ga0070674_100097915 3300005356 Bacteria 2131
13 Ga0070674_100430550 3300005356 Bacteria 1085
14 Ga0070667_100015914 3300005367 Bacteria 6223
15 Ga0070667_100089089 3300005367 Bacteria 2650
16 Ga0070678_100968105 3300005456 Bacteria 781
17 Ga0070685_10833398 3300005466 Bacteria 682
18 Ga0070672_100579469 3300005543 Bacteria 976
19 Ga0070665_100002422 3300005548 Bacteria 20575
20 Ga0068857_100517706 3300005577 Bacteria 1121
21 Ga0068861_100742890 3300005719 Bacteria 916
22 Ga0068860_100000902 3300005843 Bacteria 32958
23 Ga0068860_100271576 3300005843 Bacteria 1655
24 Ga0081539_10027734 3300005985 Bacteria 3579
25 Ga0081539_10036294 3300005985 Bacteria 2952
26 Ga0075365_10013217 3300006038 Bacteria 4926
27 Ga0075365_10016813 3300006038 Bacteria 4461
28 Ga0075365_10021506 3300006038 Bacteria 4026
29 Ga0075365_10041264 3300006038 Bacteria 3014
30 Ga0075365_10042910 3300006038 Bacteria 2959
31 Ga0075365_10051174 3300006038 Bacteria 2727
32 Ga0075365_10051780 3300006038 Bacteria 2713
33 Ga0075365_10099820 3300006038 Bacteria 1987
34 Ga0075365_10154985 3300006038 Bacteria 1594
35 Ga0075365_10221820 3300006038 Bacteria 1326
36 Ga0075365_10263237 3300006038 Bacteria 1212
37 Ga0075365_10334751 3300006038 Bacteria 1066
38 Ga0075365_10379283 3300006038 Bacteria 997
39 Ga0075365_10391976 3300006038 Bacteria 980
40 Ga0075368_10001785 3300006042 Bacteria 6920
41 Ga0075368_10125312 3300006042 Bacteria 1066
42 Ga0075363_100008413 3300006048 Bacteria 4801
43 Ga0075363_100010927 3300006048 Bacteria 4332
44 Ga0075363_100037832 3300006048 Bacteria 2535
45 Ga0075363_100080848 3300006048 Bacteria 1777
46 Ga0075363_100177265 3300006048 Bacteria 1212
47 Ga0075364_10023870 3300006051 Bacteria 3875
48 Ga0075364_10032747 3300006051 Bacteria 3342
49 Ga0075364_10066346 3300006051 Bacteria 2371
50 Ga0075364_10068704 3300006051 Bacteria 2330
51 Ga0075364_10078808 3300006051 Bacteria 2176
52 Ga0075364_10096497 3300006051 Bacteria 1966
53 Ga0075364_10433744 3300006051 Bacteria 897
54 Ga0070715_10036910 3300006163 Bacteria 2019
55 Ga0075367_10017897 3300006178 Bacteria 3899
56 Ga0075367_10031462 3300006178 Bacteria 3047
57 Ga0075367_10154159 3300006178 Bacteria 1427
58 Ga0075370_10014486 3300006353 Bacteria 4207
59 Ga0075370_10028837 3300006353 Bacteria 3088
60 Ga0075370_10056569 3300006353 Bacteria 2229
61 Ga0075370_10263762 3300006353 Bacteria 1022
62 Ga0075370_10267633 3300006353 Bacteria 1014
63 Ga0075429_100131167 3300006880 Bacteria 2192
64 Ga0075429_100169034 3300006880 Bacteria 1915
65 Ga0111539_10302580 3300009094 Bacteria 1861
66 Ga0111539_11391920 3300009094 Bacteria 814
67 Ga0105245_10499318 3300009098 Bacteria 1232
68 Ga0114129_10000012 3300009147 Bacteria 135523
69 Ga0114129_11111942 3300009147 Bacteria 989
70 Ga0105243_10309969 3300009148 Bacteria 1434
71 Ga0105243_10529150 3300009148 Bacteria 1122
72 Ga0105243_11143957 3300009148 Bacteria 789
73 Ga0105242_10591402 3300009176 Bacteria 1070
74 Ga0105248_10469573 3300009177 Bacteria 1418
75 Ga0105029_105274 3300009984 Bacteria 904
76 Ga0105246_10861037 3300011119 Bacteria 809
77 Ga0157375_11207179 3300013308 Bacteria 887
78 Ga0157375_11851138 3300013308 Bacteria 716
79 Ga0163163_10714280 3300014325 Bacteria 1066
80 Ga0163163_10718950 3300014325 Bacteria 1062
81 Ga0163163_10851707 3300014325 Bacteria 975
82 Ga0163163_11318257 3300014325 Bacteria 784
83 Ga0182008_10003431 3300014497 Bacteria 9569
84 Ga0157379_10972668 3300014968 Bacteria 808
85 Ga0182007_10000488 3300015262 Bacteria 23798
86 Ga0182005_1006787 3300015265 Bacteria 3470
87 Ga0163161_10024268 3300017792 Bacteria 4283
88 Ga0206353_10029737 3300020082 Bacteria 5878
89 Ga0207426_1079077 3300025302 Bacteria 896
90 Ga0207685_10121226 3300025905 Bacteria 1148
91 Ga0207643_10101268 3300025908 Bacteria 1689
92 Ga0207659_10443083 3300025926 Bacteria 1093
93 Ga0207709_10139791 3300025935 Bacteria 1663
94 Ga0207709_10672522 3300025935 Bacteria 826
95 Ga0207669_10091619 3300025937 Bacteria 1981
96 Ga0207704_10360054 3300025938 Bacteria 1135
97 Ga0207691_10349407 3300025940 Bacteria 1265
98 Ga0207658_10123345 3300025986 Bacteria 2069
99 Ga0207658_10130827 3300025986 Bacteria 2016
100 Ga0207674_10282695 3300026116 Bacteria 1607
101 Ga0207675_100102552 3300026118 Bacteria 2696
102 Ga0207683_10847042 3300026121 Bacteria 849
103 Ga0209813_10051855 3300027866 Bacteria 1285
104 Ga0209813_10099392 3300027866 Bacteria 988
105 Ga0268266_10002026 3300028379 Bacteria 22552
106 Ga0268264_10000664 3300028381 Bacteria 40313
107 Ga0268264_10236207 3300028381 Bacteria 1691
108 Ga0307517_10036318 3300028786 Bacteria 5545
109 Ga0316181_1042970 3300030744 Bacteria 1731
110 Ga0307513_10196452 3300031456 Bacteria 1863
111 Ga0307509_10150669 3300031507 Bacteria 2242
112 Ga0307509_10382525 3300031507 Bacteria 1120
113 Ga0307508_10075635 3300031616 Bacteria 2944
114 Ga0307514_10074652 3300031649 Bacteria 2531
115 Ga0307514_10140106 3300031649 Bacteria 1646
116 Ga0307516_10050128 3300031730 Bacteria 4097
117 Ga0307516_10071211 3300031730 Bacteria 3338
118 Ga0307413_10002760 3300031824 Bacteria 7226
119 Ga0307413_10034442 3300031824 Bacteria 2895
120 Ga0307413_10497657 3300031824 Bacteria 978
121 Ga0307410_10254038 3300031852 Bacteria 1368
122 Ga0307407_10310546 3300031903 Bacteria 1103
123 Ga0307409_100184888 3300031995 Bacteria 1849
124 Ga0307409_100452285 3300031995 Bacteria 1240
125 Ga0307409_100468168 3300031995 Bacteria 1220
126 Ga0307416_100405792 3300032002 Bacteria 1402
127 Ga0307411_10390224 3300032005 Bacteria 1148
128 Ga0307411_10605349 3300032005 Bacteria 943
129 Ga0307415_101165225 3300032126 Unclassified 725
130 Ga0307510_10318933 3300033180 Bacteria 1011
131 Ga0395900_0030657 3300037418 Bacteria 5522
132 Ga0395905_0355215 3300037471 Bacteria 1358
133 Ga0395905_0713613 3300037471 Bacteria 905
134 Ga0395905_1042905 3300037471 Bacteria 721
135 Ga0395901_0069099 3300038443 Bacteria 3679
136 Ga0395901_0129437 3300038443 Bacteria 2652
137 Ga0395901_0917486 3300038443 Bacteria 857
138 Ga0395901_1077627 3300038443 Bacteria 775
139 Ga0451843_0181192 3300041509 Bacteria 659
140 Ga0451853_3069724 3300041512 Bacteria 1336
141 Ga0439433_0123416 3300041999 Bacteria 654
142 Ga0450894_000158 3300042131 Bacteria 11965
143 Ga0466969_0029706 3300044656 Bacteria 2790
144 Ga0466969_0112193 3300044656 Bacteria 1275
145 Ga0466972_0057334 3300044658 Bacteria 1871
146 Ga0466972_0191174 3300044658 Bacteria 959
147 Ga0466965_0024595 3300044683 Bacteria 2914
148 Ga0466965_0131393 3300044683 Bacteria 1299
149 Ga0466965_0340745 3300044683 Bacteria 820
150 Ga0466966_0039051 3300044684 Bacteria 3057
151 Ga0466966_0097579 3300044684 Bacteria 1820
152 Ga0466966_0326562 3300044684 Bacteria 922
153 Ga0466961_0041198 3300044693 Bacteria 2961
154 Ga0466961_0051112 3300044693 Bacteria 2640
155 Ga0466961_0093529 3300044693 Bacteria 1897
156 Ga0466961_0294279 3300044693 Bacteria 992
157 Ga0466961_0299404 3300044693 Bacteria 983
158 Ga0466963_0011873 3300044694 Bacteria 5317
159 Ga0466963_0052834 3300044694 Bacteria 2697
160 Ga0466971_0211227 3300044719 Bacteria 918
161 Ga0466970_0006671 3300044765 Bacteria 5773
162 Ga0466970_0006851 3300044765 Bacteria 5704
163 Ga0466970_0022091 3300044765 Bacteria 3321
164 Ga0466970_0062051 3300044765 Bacteria 2003
165 Ga0466970_0250307 3300044765 Bacteria 993
166 Ga0466957_0130435 3300044842 Bacteria 1610
167 Ga0466957_0200528 3300044842 Bacteria 1310
168 Ga0466957_0800441 3300044842 Bacteria 669
169 Ga0466960_0002420 3300044901 Bacteria 7030
170 Ga0466960_0004668 3300044901 Bacteria 5372
171 Ga0466960_0009696 3300044901 Bacteria 3980
172 Ga0466960_0040598 3300044901 Bacteria 2201
173 Ga0466960_0147697 3300044901 Bacteria 1253
174 Ga0466959_0018250 3300045049 Bacteria 5151
175 Ga0466959_0429936 3300045049 Bacteria 896
176 Ga0466958_0032344 3300045836 Bacteria 3112
177 Ga0466958_0308858 3300045836 Bacteria 1016
178 Ga0466967_0036510 3300045976 Bacteria 4196
179 Ga0466967_0061397 3300045976 Bacteria 3334
180 Ga0466967_0093154 3300045976 Bacteria 2741
181 Ga0466967_0660890 3300045976 Bacteria 1034
182 Ga0466967_0831073 3300045976 Bacteria 918
183 Ga0495603_0196928 3300046455 Bacteria 1164
184 Ga0495603_0242926 3300046455 Bacteria 1037
185 Ga0495629_0280133 3300046459 Bacteria 1144
186 Ga0495582_0091359 3300046473 Bacteria 1698
187 Ga0495639_0072048 3300046475 Bacteria 1597
188 Ga0495594_0197648 3300046499 Bacteria 1146
189 Ga0495606_0003316 3300046507 Bacteria 17184
190 Ga0495610_0131233 3300046512 Bacteria 1087
191 Ga0495610_0140330 3300046512 Bacteria 1041
192 Ga0495643_0019446 3300046522 Bacteria 3929
193 Ga0495645_0025609 3300046543 Bacteria 4283
194 Ga0495668_0000265 3300046616 Bacteria 73791
195 Ga0495668_0431091 3300046616 Bacteria 725
196 Ga0495588_0154468 3300046674 Bacteria 1213
197 Ga0495588_0312906 3300046674 Bacteria 826
198 Ga0495670_0047167 3300046691 Bacteria 2153
199 Ga0495589_0228680 3300046794 Bacteria 873
200 Ga0495660_0070501 3300046810 Bacteria 1855
201 Ga0495581_0006435 3300047315 Bacteria 6816
202 Ga0495683_0000585 3300047323 Bacteria 27495
203 Ga0495687_014531 3300047443 Bacteria 4047
204 Ga0495687_043530 3300047443 Bacteria 1955
205 Ga0495675_0004687 3300047444 Bacteria 8309
206 Ga0495679_054123 3300047446 Bacteria 1196
207 Ga0495685_008780 3300047447 Bacteria 3365
208 Ga0495681_0013840 3300047470 Bacteria 4662
209 Ga0495686_0173003 3300047472 Bacteria 1255
210 Ga0495593_0192396 3300047673 Bacteria 1026
211 Ga0495626_0000052 3300048091 Bacteria 156421
212 Ga0496101_0126638 3300048904 Bacteria 1936
213 Ga0496102_0201486 3300048905 Bacteria 1876
214 Ga0496102_1221990 3300048905 Bacteria 671
215 Ga0496106_0596946 3300048909 Bacteria 884
216 Ga0496111_0099899 3300048914 Bacteria 2131
217 Ga0496113_0936580 3300048916 Bacteria 684
218 Ga0496124_0050639 3300048927 Bacteria 3538
219 Ga0501031_0127008 3300049568 Bacteria 1666
220 Ga0501031_0244197 3300049568 Bacteria 1167
221 Ga0501036_0351979 3300049572 Bacteria 1230
222 Ga0501040_0193868 3300049576 Bacteria 1442
223 Ga0501041_0119667 3300049577 Bacteria 1636
224 Ga0501043_0050608 3300049579 Bacteria 3265
225 Ga0501046_0135567 3300049580 Bacteria 1865
226 Ga0501047_0051379 3300049581 Bacteria 3983
227 Ga0501068_0269677 3300049584 Bacteria 1087
228 Ga0501069_0221317 3300049585 Bacteria 1100
229 Ga0501070_0073422 3300049586 Bacteria 2830
230 Ga0501071_0249676 3300049587 Bacteria 1339
231 Ga0501071_0325057 3300049587 Bacteria 1168
232 Ga0501072_0244762 3300049588 Bacteria 1428
233 Ga0501072_0399783 3300049588 Bacteria 1090
234 Ga0501074_0183868 3300049590 Bacteria 1491
235 Ga0501075_0386534 3300049591 Bacteria 1067
236 Ga0501075_0679846 3300049591 Bacteria 784
237 Ga0501076_0039611 3300049592 Bacteria 3700
238 Ga0501076_0328871 3300049592 Bacteria 1254
239 Ga0501077_0485538 3300049593 Bacteria 792
240 Ga0501079_0176509 3300049741 Bacteria 1666
241 Ga0501080_0367230 3300049742 Bacteria 1298
242 Ga0501080_0619373 3300049742 Bacteria 960
243 Ga0501035_0169985 3300049822 Bacteria 1884
244 Ga0501044_0258374 3300049823 Bacteria 1681
245 Ga0501045_0035483 3300049824 Bacteria 3621
246 Ga0501045_0056525 3300049824 Bacteria 2870
247 Ga0501045_0428266 3300049824 Bacteria 984
248 nmdc:mga03n38_102542_c1 3300050490 Bacteria 1382
249 nmdc:mga03n38_180834_c1 3300050490 Bacteria 1080
250 nmdc:mga03n38_241901_c1 3300050490 Bacteria 950
251 nmdc:mga03n38_285606_c1 3300050490 Bacteria 882
252 nmdc:mga03n38_3116_c1 3300050490 Bacteria 5271
253 nmdc:mga03n38_88315_c1 3300050490 Bacteria 1471
254 nmdc:mga00v17_101671_c1 3300050491 Bacteria 1815
255 nmdc:mga00v17_191062_c1 3300050491 Bacteria 1323
256 nmdc:mga00v17_300293_c1 3300050491 Bacteria 1043
257 nmdc:mga00v17_370413_c1 3300050491 Bacteria 931
258 nmdc:mga00v17_39088_c1 3300050491 Bacteria 2839
259 nmdc:mga00v17_59733_c1 3300050491 Bacteria 2340
260 nmdc:mga0yw44_109212_c1 3300050492 Bacteria 1771
261 nmdc:mga0yw44_112634_c1 3300050492 Bacteria 1745
262 nmdc:mga0yw44_186103_c1 3300050492 Bacteria 1368
263 nmdc:mga0yw44_192512_c1 3300050492 Bacteria 1345
264 nmdc:mga0yw44_206441_c1 3300050492 Bacteria 1299
265 nmdc:mga0yw44_227538_c1 3300050492 Bacteria 705
266 nmdc:mga0yw44_3076_c1 3300050492 Bacteria 7308
267 nmdc:mga0yw44_33407_c1 3300050492 Bacteria 3006
268 nmdc:mga0yw44_40955_c1 3300050492 Bacteria 2755
269 nmdc:mga0yw44_60743_c1 3300050492 Bacteria 2316
270 nmdc:mga06z11_106417_c1 3300050494 Bacteria 1547
271 nmdc:mga06z11_14415_c1 3300050494 Bacteria 3501
272 nmdc:mga06z11_59087_c1 3300050494 Bacteria 1992
273 nmdc:mga06z11_75153_c1 3300050494 Bacteria 1798
274 nmdc:mga04h51_20477_c1 3300050495 Bacteria 1976
275 nmdc:mga07m45_162887_c1 3300050496 Bacteria 1295
276 nmdc:mga07m45_6058_c1 3300050496 Bacteria 6089
277 nmdc:mga07m45_92552_c1 3300050496 Bacteria 1733
278 nmdc:mga05p37_1195_c1 3300050507 Bacteria 30001
279 nmdc:mga09592_111475_c1 3300050508 Bacteria 2347
280 nmdc:mga08y16_544860_c1 3300050511 Bacteria 1175
281 Ga0495655_0023025 3300053083 Bacteria 1431
282 Ga0500578_0184700 3300053086 Bacteria 1283
283 Ga0500654_066832 3300053099 Bacteria 1787
284 Ga0500554_061450 3300053102 Bacteria 1206
285 Ga0500556_0001438 3300053104 Bacteria 10133
286 Ga0500558_190832 3300053106 Bacteria 722
287 Ga0500560_000153 3300053107 Bacteria 7755
288 Ga0500560_029577 3300053107 Bacteria 1644
289 Ga0500569_055755 3300053109 Bacteria 1206
290 Ga0500593_000122 3300053117 Bacteria 30524
291 Ga0500652_094142 3300053131 Bacteria 1251
292 Ga0500658_0018460 3300053134 Bacteria 2615
293 Ga0500561_0002143 3300053137 Bacteria 3295
294 Ga0500573_0009948 3300053140 Bacteria 5300
295 Ga0500573_0031305 3300053140 Bacteria 3070
296 Ga0500579_131778 3300053143 Bacteria 1166
297 Ga0500616_0020298 3300053153 Bacteria 3733
298 Ga0500633_0006831 3300053160 Bacteria 2829
299 Ga0500634_0013868 3300053161 Bacteria 4238
300 Ga0500656_003100 3300053732 Bacteria 1536
301 Ga0501084_0119155 3300054114 Bacteria 2219
302 Ga0501084_0549559 3300054114 Bacteria 976
303 Ga0501084_0570880 3300054114 Bacteria 956
304 Ga0501082_0069973 3300060353 Bacteria 3022
305 Ga0466962_0020278 3300061719 Bacteria 3194
306 Ga0530510_0562290 3300061734 Bacteria 867

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300041999 Ga0439433_0123416 Ga0439433_0123416_65_586 172
2 3300042131 Ga0450894_000158 Ga0450894_000158_4062_4787 172
3 3300046455 Ga0495603_0196928 Ga0495603_0196928_141_659 172
4 3300046512 Ga0495610_0131233 Ga0495610_0131233_140_658 172
5 3300047315 Ga0495581_0006435 Ga0495581_0006435_6251_6769 172
6 3300038443 Ga0395901_0917486 Ga0395901_0917486_284_841 176
7 3300048904 Ga0496101_0126638 Ga0496101_0126638_1341_1880 176
8 3300048909 Ga0496106_0596946 Ga0496106_0596946_310_849 176
9 3300050490 nmdc:mga03n38_285606_c1 nmdc:mga03n38_285606_c1_245_796 176
10 3300013308 Ga0157375_11207179 Ga0157375_112071791 177
11 iso_pu_bacteria 2643221696 2644532492 177
12 3300005548 Ga0070665_100002422 Ga0070665_10000242219 180
13 3300028379 Ga0268266_10002026 Ga0268266_1000202619 180
14 3300005367 Ga0070667_100015914 Ga0070667_1000159146 181
15 3300005577 Ga0068857_100517706 Ga0068857_1005177062 181
16 3300005985 Ga0081539_10027734 Ga0081539_100277343 181
17 3300006038 Ga0075365_10016813 Ga0075365_100168133 181
18 3300006038 Ga0075365_10042910 Ga0075365_100429102 181
19 3300006038 Ga0075365_10051780 Ga0075365_100517803 181
20 3300006038 Ga0075365_10099820 Ga0075365_100998202 181
21 3300006042 Ga0075368_10001785 Ga0075368_100017854 181
22 3300006048 Ga0075363_100037832 Ga0075363_1000378322 181
23 3300006048 Ga0075363_100080848 Ga0075363_1000808482 181
24 3300006051 Ga0075364_10023870 Ga0075364_100238702 181
25 3300006051 Ga0075364_10032747 Ga0075364_100327473 181
26 3300006051 Ga0075364_10096497 Ga0075364_100964972 181
27 3300006353 Ga0075370_10056569 Ga0075370_100565692 181
28 3300009094 Ga0111539_10302580 Ga0111539_103025802 181
29 3300009094 Ga0111539_11391920 Ga0111539_113919202 181
30 3300009148 Ga0105243_11143957 Ga0105243_111439571 181
31 3300014325 Ga0163163_10718950 Ga0163163_107189501 181
32 3300026116 Ga0207674_10282695 Ga0207674_102826952 181
33 3300027866 Ga0209813_10051855 Ga0209813_100518551 181
34 3300030744 Ga0316181_1042970 Ga0316181_10429702 181
35 3300031824 Ga0307413_10034442 Ga0307413_100344422 181
36 3300031852 Ga0307410_10254038 Ga0307410_102540382 181
37 3300037418 Ga0395900_0030657 Ga0395900_0030657_2442_3017 181
38 3300037471 Ga0395905_1042905 Ga0395905_1042905_115_681 181
39 3300041509 Ga0451843_0181192 Ga0451843_0181192_31_591 181
40 3300044658 Ga0466972_0057334 Ga0466972_0057334_29_583 181
41 3300044683 Ga0466965_0340745 Ga0466965_0340745_25_606 181
42 3300044765 Ga0466970_0022091 Ga0466970_0022091_2498_3073 181
43 3300044901 Ga0466960_0147697 Ga0466960_0147697_647_1201 181
44 3300048927 Ga0496124_0050639 Ga0496124_0050639_2261_2824 181
45 3300049568 Ga0501031_0244197 Ga0501031_0244197_108_671 181
46 3300049576 Ga0501040_0193868 Ga0501040_0193868_13_576 181
47 3300049577 Ga0501041_0119667 Ga0501041_0119667_764_1327 181
48 3300049580 Ga0501046_0135567 Ga0501046_0135567_195_758 181
49 3300049587 Ga0501071_0249676 Ga0501071_0249676_400_963 181
50 3300049587 Ga0501071_0325057 Ga0501071_0325057_433_996 181
51 3300049588 Ga0501072_0244762 Ga0501072_0244762_113_676 181
52 3300049588 Ga0501072_0399783 Ga0501072_0399783_409_1032 181
53 3300049590 Ga0501074_0183868 Ga0501074_0183868_267_833 181
54 3300049591 Ga0501075_0386534 Ga0501075_0386534_42_665 181
55 3300049591 Ga0501075_0679846 Ga0501075_0679846_211_774 181
56 3300049592 Ga0501076_0039611 Ga0501076_0039611_1092_1655 181
57 3300049592 Ga0501076_0328871 Ga0501076_0328871_353_916 181
58 3300049593 Ga0501077_0485538 Ga0501077_0485538_95_670 181
59 3300049741 Ga0501079_0176509 Ga0501079_0176509_862_1425 181
60 3300049822 Ga0501035_0169985 Ga0501035_0169985_71_634 181
61 3300049824 Ga0501045_0056525 Ga0501045_0056525_921_1484 181
62 3300049824 Ga0501045_0428266 Ga0501045_0428266_229_792 181
63 3300050490 nmdc:mga03n38_241901_c1 nmdc:mga03n38_241901_c1_317_874 181
64 3300050490 nmdc:mga03n38_88315_c1 nmdc:mga03n38_88315_c1_753_1319 181
65 3300050491 nmdc:mga00v17_191062_c1 nmdc:mga00v17_191062_c1_240_806 181
66 3300050491 nmdc:mga00v17_300293_c1 nmdc:mga00v17_300293_c1_233_793 181
67 3300050491 nmdc:mga00v17_370413_c1 nmdc:mga00v17_370413_c1_333_893 181
68 3300050492 nmdc:mga0yw44_109212_c1 nmdc:mga0yw44_109212_c1_1122_1676 181
69 3300050492 nmdc:mga0yw44_33407_c1 nmdc:mga0yw44_33407_c1_623_1189 181
70 3300050494 nmdc:mga06z11_14415_c1 nmdc:mga06z11_14415_c1_706_1272 181
71 3300050494 nmdc:mga06z11_59087_c1 nmdc:mga06z11_59087_c1_1284_1841 181
72 3300050495 nmdc:mga04h51_20477_c1 nmdc:mga04h51_20477_c1_1135_1701 181
73 3300050496 nmdc:mga07m45_6058_c1 nmdc:mga07m45_6058_c1_2209_2775 181
74 3300050511 nmdc:mga08y16_544860_c1 nmdc:mga08y16_544860_c1_16_579 181
75 3300053083 Ga0495655_0023025 Ga0495655_0023025_545_1114 181
76 3300053102 Ga0500554_061450 Ga0500554_061450_16_576 181
77 3300053104 Ga0500556_0001438 Ga0500556_0001438_2791_3354 181
78 3300053117 Ga0500593_000122 Ga0500593_000122_16280_16834 181
79 3300053140 Ga0500573_0031305 Ga0500573_0031305_1034_1588 181
80 3300054114 Ga0501084_0119155 Ga0501084_0119155_1556_2119 181
81 3300054114 Ga0501084_0549559 Ga0501084_0549559_225_788 181
82 3300054114 Ga0501084_0570880 Ga0501084_0570880_291_854 181
83 3300060353 Ga0501082_0069973 Ga0501082_0069973_1118_1681 181
84 3300006038 Ga0075365_10021506 Ga0075365_100215063 182
85 3300041512 Ga0451853_3069724 Ga0451853_3069724_158_916 183
86 3300048905 Ga0496102_0201486 Ga0496102_0201486_446_1021 185
87 3300003578 Ga0006562J51391_1116078 Ga0006562J51391_11160786 187
88 3300003578 Ga0006562J51391_1116086 Ga0006562J51391_11160863 187
89 3300031730 Ga0307516_10071211 Ga0307516_100712113 187
90 3300046512 Ga0495610_0140330 Ga0495610_0140330_273_950 187
91 iso_pu_bacteria 2643221670 2644389843 188
92 iso_pu_bacteria 2808606982 2811849047 188
93 iso_pu_bacteria 2866612099 2866614618 188
94 iso_pu_bacteria 2918501144 2918505642 188
95 iso_pu_bacteria 2928142448 2928143058 188
96 3300031649 Ga0307514_10140106 Ga0307514_101401061 189
97 iso_pu_bacteria 2565956761 2566992554 189
98 iso_pu_bacteria 2738541308 2738887547 189
99 iso_pu_bacteria 2904535858 2904541584 189
100 iso_pu_bacteria 2904765812 2904767425 189
101 iso_pu_bacteria 2904770941 2904774771 189
102 iso_pu_bacteria 2908811453 2908813076 189
103 iso_pu_bacteria 2919420072 2919423955 189
104 iso_pu_bacteria 2919432681 2919436593 189
105 iso_pu_bacteria 2922554459 2922560039 189
106 3300020082 Ga0206353_10029737 Ga0206353_100297372 190
107 3300045976 Ga0466967_0061397 Ga0466967_0061397_1454_2065 190
108 iso_pu_bacteria 2866552031 2866552366 190
109 iso_pu_bacteria 8025478263 8025480354 190
110 iso_pu_bacteria 2547132424 2548699447 191
111 iso_pu_bacteria 2551306166 2552111276 191
112 iso_pu_bacteria 2643221692 2644514335 191
113 iso_pu_bacteria 2738543034 2739366270 191
114 iso_pu_bacteria 2811994874 2812330106 191
115 iso_pu_bacteria 2919713450 2919715333 191
116 iso_pu_bacteria 8056667051 8056669623 191
117 3300006038 Ga0075365_10391976 Ga0075365_103919762 192
118 iso_pu_bacteria 2643221617 2644101061 192
119 iso_pu_bacteria 2643221620 2644117942 192
120 iso_pu_bacteria 2773857762 2774395173 192
121 iso_pu_bacteria 2795385470 2795782613 192
122 iso_pu_bacteria 2808606439 2809193993 192
123 iso_pu_bacteria 2811994878 2812348731 192
124 iso_pu_bacteria 2857481737 2857484922 192
125 iso_pu_bacteria 2867369537 2867371875 192
126 iso_pu_bacteria 2891326441 2891327712 192
127 iso_pu_bacteria 2891968417 2891973505 192
128 iso_pu_bacteria 2990088156 2990088923 192
129 iso_pu_bacteria 8001781756 8001787246 192
130 3300006048 Ga0075363_100010927 Ga0075363_1000109273 193
131 3300006178 Ga0075367_10154159 Ga0075367_101541592 193
132 3300006353 Ga0075370_10014486 Ga0075370_100144862 193
133 3300006353 Ga0075370_10267633 Ga0075370_102676331 193
134 3300025935 Ga0207709_10672522 Ga0207709_106725222 193
135 3300044901 Ga0466960_0004668 Ga0466960_0004668_782_1399 193
136 3300046674 Ga0495588_0154468 Ga0495588_0154468_319_912 193
137 3300047673 Ga0495593_0192396 Ga0495593_0192396_291_884 193
138 iso_pu_bacteria 2751185725 2753035758 193
139 iso_pu_bacteria 2751185792 2753326217 193
140 iso_pu_bacteria 2887478801 2887485192 193
141 iso_pu_bacteria 2932398195 2932401161 193
142 3300044694 Ga0466963_0011873 Ga0466963_0011873_1791_2387 194
143 3300045976 Ga0466967_0660890 Ga0466967_0660890_60_656 194
144 iso_pu_bacteria 2643221576 2643891175 194
145 iso_pu_bacteria 2643221590 2643960231 194
146 iso_pu_bacteria 2791355406 2793980055 194
147 iso_pu_bacteria 2842888712 2842889050 194
148 iso_pu_bacteria 3002998708 3003005916 194
149 iso_pu_bacteria 8047893842 8047898099 194
150 iso_pu_bacteria 8048127548 8048136797 194
151 iso_pu_bacteria 8048356638 8048360794 194
152 iso_pu_bacteria 8048369669 8048375062 194
153 iso_pu_bacteria 8048379754 8048383144 194
154 3300003578 Ga0006562J51391_1105644 Ga0006562J51391_11056443 195
155 3300006051 Ga0075364_10068704 Ga0075364_100687042 195
156 3300027866 Ga0209813_10099392 Ga0209813_100993922 195
157 3300031995 Ga0307409_100452285 Ga0307409_1004522852 195
158 3300031995 Ga0307409_100468168 Ga0307409_1004681681 195
159 3300032005 Ga0307411_10390224 Ga0307411_103902242 195
160 3300032126 Ga0307415_101165225 Ga0307415_1011652251 195
161 3300037471 Ga0395905_0713613 Ga0395905_0713613_107_706 195
162 3300038443 Ga0395901_0129437 Ga0395901_0129437_1599_2198 195
163 3300044658 Ga0466972_0191174 Ga0466972_0191174_314_916 195
164 3300044683 Ga0466965_0024595 Ga0466965_0024595_1406_2008 195
165 3300044693 Ga0466961_0041198 Ga0466961_0041198_1626_2228 195
166 3300044694 Ga0466963_0052834 Ga0466963_0052834_1738_2340 195
167 3300044719 Ga0466971_0211227 Ga0466971_0211227_44_646 195
168 3300044842 Ga0466957_0200528 Ga0466957_0200528_50_652 195
169 3300049585 Ga0501069_0221317 Ga0501069_0221317_61_663 195
170 3300050491 nmdc:mga00v17_101671_c1 nmdc:mga00v17_101671_c1_236_859 195
171 3300061719 Ga0466962_0020278 Ga0466962_0020278_2499_3101 195
172 iso_pu_bacteria 2795385472 2795793122 195
173 iso_pu_bacteria 2974315732 2974316144 195
174 iso_pu_bacteria 2984523437 2984524306 195
175 iso_pu_bacteria 8056447290 8056451070 195
176 3300009176 Ga0105242_10591402 Ga0105242_105914022 196
177 3300009984 Ga0105029_105274 Ga0105029_1052742 196
178 3300031456 Ga0307513_10196452 Ga0307513_101964522 196
179 3300031824 Ga0307413_10002760 Ga0307413_100027602 196
180 3300031824 Ga0307413_10497657 Ga0307413_104976571 196
181 3300044683 Ga0466965_0131393 Ga0466965_0131393_81_734 196
182 3300044684 Ga0466966_0097579 Ga0466966_0097579_187_789 196
183 3300044693 Ga0466961_0093529 Ga0466961_0093529_963_1565 196
184 3300044765 Ga0466970_0006671 Ga0466970_0006671_776_1378 196
185 3300044765 Ga0466970_0062051 Ga0466970_0062051_86_688 196
186 3300044842 Ga0466957_0800441 Ga0466957_0800441_16_618 196
187 3300044901 Ga0466960_0009696 Ga0466960_0009696_2752_3354 196
188 3300045049 Ga0466959_0429936 Ga0466959_0429936_48_650 196
189 3300045836 Ga0466958_0308858 Ga0466958_0308858_47_760 196
190 3300045976 Ga0466967_0036510 Ga0466967_0036510_486_1088 196
191 3300046455 Ga0495603_0242926 Ga0495603_0242926_345_962 196
192 3300046475 Ga0495639_0072048 Ga0495639_0072048_808_1425 196
193 3300046543 Ga0495645_0025609 Ga0495645_0025609_486_1112 196
194 3300047444 Ga0495675_0004687 Ga0495675_0004687_6764_7390 196
195 3300048905 Ga0496102_1221990 Ga0496102_1221990_29_631 196
196 3300048916 Ga0496113_0936580 Ga0496113_0936580_70_672 196
197 3300049584 Ga0501068_0269677 Ga0501068_0269677_91_699 196
198 3300050492 nmdc:mga0yw44_192512_c1 nmdc:mga0yw44_192512_c1_180_791 196
199 3300061734 Ga0530510_0562290 Ga0530510_0562290_93_719 196
200 iso_pu_bacteria 2643221587 2643942173 196
201 iso_pu_bacteria 2643221677 2644429256 196
202 iso_pu_bacteria 2862507626 2862512232 196
203 3300005329 Ga0070683_100756425 Ga0070683_1007564251 197
204 3300005367 Ga0070667_100089089 Ga0070667_1000890892 197
205 3300005843 Ga0068860_100271576 Ga0068860_1002715762 197
206 3300006038 Ga0075365_10013217 Ga0075365_100132174 197
207 3300006038 Ga0075365_10051174 Ga0075365_100511742 197
208 3300006038 Ga0075365_10154985 Ga0075365_101549852 197
209 3300006038 Ga0075365_10263237 Ga0075365_102632372 197
210 3300006038 Ga0075365_10379283 Ga0075365_103792832 197
211 3300006048 Ga0075363_100008413 Ga0075363_1000084132 197
212 3300006163 Ga0070715_10036910 Ga0070715_100369103 197
213 3300006178 Ga0075367_10031462 Ga0075367_100314622 197
214 3300006353 Ga0075370_10028837 Ga0075370_100288372 197
215 3300006880 Ga0075429_100131167 Ga0075429_1001311672 197
216 3300006880 Ga0075429_100169034 Ga0075429_1001690342 197
217 3300009147 Ga0114129_10000012 Ga0114129_1000001224 197
218 3300009147 Ga0114129_11111942 Ga0114129_111119422 197
219 3300011119 Ga0105246_10861037 Ga0105246_108610372 197
220 3300014968 Ga0157379_10972668 Ga0157379_109726682 197
221 3300025905 Ga0207685_10121226 Ga0207685_101212262 197
222 3300025986 Ga0207658_10123345 Ga0207658_101233453 197
223 3300025986 Ga0207658_10130827 Ga0207658_101308272 197
224 3300028381 Ga0268264_10236207 Ga0268264_102362072 197
225 3300031507 Ga0307509_10150669 Ga0307509_101506691 197
226 3300044693 Ga0466961_0299404 Ga0466961_0299404_351_959 197
227 3300045976 Ga0466967_0831073 Ga0466967_0831073_79_690 197
228 3300046499 Ga0495594_0197648 Ga0495594_0197648_296_907 197
229 3300049568 Ga0501031_0127008 Ga0501031_0127008_945_1571 197
230 3300049572 Ga0501036_0351979 Ga0501036_0351979_280_906 197
231 3300049579 Ga0501043_0050608 Ga0501043_0050608_139_765 197
232 3300049581 Ga0501047_0051379 Ga0501047_0051379_1893_2501 197
233 3300049742 Ga0501080_0367230 Ga0501080_0367230_368_1039 197
234 3300049823 Ga0501044_0258374 Ga0501044_0258374_903_1529 197
235 3300049824 Ga0501045_0035483 Ga0501045_0035483_2948_3574 197
236 3300050490 nmdc:mga03n38_180834_c1 nmdc:mga03n38_180834_c1_88_699 197
237 3300050491 nmdc:mga00v17_39088_c1 nmdc:mga00v17_39088_c1_1287_1898 197
238 3300050492 nmdc:mga0yw44_112634_c1 nmdc:mga0yw44_112634_c1_300_914 197
239 3300050492 nmdc:mga0yw44_206441_c1 nmdc:mga0yw44_206441_c1_538_1152 197
240 3300050492 nmdc:mga0yw44_227538_c1 nmdc:mga0yw44_227538_c1_14_625 197
241 3300050492 nmdc:mga0yw44_3076_c1 nmdc:mga0yw44_3076_c1_4753_5394 197
242 3300050494 nmdc:mga06z11_75153_c1 nmdc:mga06z11_75153_c1_217_828 197
243 3300050496 nmdc:mga07m45_92552_c1 nmdc:mga07m45_92552_c1_531_1142 197
244 3300050507 nmdc:mga05p37_1195_c1 nmdc:mga05p37_1195_c1_13762_14415 197
245 3300050508 nmdc:mga09592_111475_c1 nmdc:mga09592_111475_c1_1162_1779 197
246 3300053106 Ga0500558_190832 Ga0500558_190832_28_648 197
247 3300053107 Ga0500560_000153 Ga0500560_000153_1291_1911 197
248 3300053140 Ga0500573_0009948 Ga0500573_0009948_2650_3270 197
249 iso_pu_bacteria 2554235005 2554257858 197
250 iso_pu_bacteria 2738543005 2739202724 197
251 iso_pu_bacteria 2791354901 2791911556 197
252 iso_pu_bacteria 2935390628 2935393412 197
253 3300005340 Ga0070689_100359263 Ga0070689_1003592631 198
254 3300005354 Ga0070675_100472222 Ga0070675_1004722222 198
255 3300005466 Ga0070685_10833398 Ga0070685_108333981 198
256 3300005543 Ga0070672_100579469 Ga0070672_1005794692 198
257 3300005843 Ga0068860_100000902 Ga0068860_1000009029 198
258 3300006038 Ga0075365_10041264 Ga0075365_100412642 198
259 3300006038 Ga0075365_10221820 Ga0075365_102218202 198
260 3300006038 Ga0075365_10334751 Ga0075365_103347512 198
261 3300006042 Ga0075368_10125312 Ga0075368_101253122 198
262 3300006051 Ga0075364_10066346 Ga0075364_100663463 198
263 3300006051 Ga0075364_10078808 Ga0075364_100788082 198
264 3300006051 Ga0075364_10433744 Ga0075364_104337442 198
265 3300006178 Ga0075367_10017897 Ga0075367_100178972 198
266 3300006353 Ga0075370_10263762 Ga0075370_102637622 198
267 3300009148 Ga0105243_10309969 Ga0105243_103099692 198
268 3300013308 Ga0157375_11851138 Ga0157375_118511381 198
269 3300014325 Ga0163163_10714280 Ga0163163_107142802 198
270 3300014325 Ga0163163_11318257 Ga0163163_113182571 198
271 3300025302 Ga0207426_1079077 Ga0207426_10790772 198
272 3300025926 Ga0207659_10443083 Ga0207659_104430831 198
273 3300025940 Ga0207691_10349407 Ga0207691_103494072 198
274 3300028381 Ga0268264_10000664 Ga0268264_1000066431 198
275 3300032005 Ga0307411_10605349 Ga0307411_106053491 198
276 3300037471 Ga0395905_0355215 Ga0395905_0355215_568_1182 198
277 3300038443 Ga0395901_1077627 Ga0395901_1077627_98_715 198
278 3300044765 Ga0466970_0006851 Ga0466970_0006851_2931_3593 198
279 3300045976 Ga0466967_0093154 Ga0466967_0093154_520_1182 198
280 3300048914 Ga0496111_0099899 Ga0496111_0099899_821_1435 198
281 3300049586 Ga0501070_0073422 Ga0501070_0073422_406_1020 198
282 3300049742 Ga0501080_0619373 Ga0501080_0619373_199_816 198
283 3300050490 nmdc:mga03n38_102542_c1 nmdc:mga03n38_102542_c1_604_1218 198
284 3300050491 nmdc:mga00v17_59733_c1 nmdc:mga00v17_59733_c1_475_1092 198
285 3300050492 nmdc:mga0yw44_186103_c1 nmdc:mga0yw44_186103_c1_633_1247 198
286 3300050492 nmdc:mga0yw44_40955_c1 nmdc:mga0yw44_40955_c1_1926_2540 198
287 3300050492 nmdc:mga0yw44_60743_c1 nmdc:mga0yw44_60743_c1_1574_2200 198
288 3300050494 nmdc:mga06z11_106417_c1 nmdc:mga06z11_106417_c1_130_744 198
289 3300050496 nmdc:mga07m45_162887_c1 nmdc:mga07m45_162887_c1_331_945 198
290 iso_pu_bacteria 2811994917 2812480525 198
291 iso_pu_bacteria 2997600082 2997600412 198
292 iso_pu_bacteria 3006493962 3006500762 198
293 3300005356 Ga0070674_100097915 Ga0070674_1000979152 199
294 3300005356 Ga0070674_100430550 Ga0070674_1004305502 199
295 3300005456 Ga0070678_100968105 Ga0070678_1009681052 199
296 3300005719 Ga0068861_100742890 Ga0068861_1007428902 199
297 3300005985 Ga0081539_10036294 Ga0081539_100362943 199
298 3300009098 Ga0105245_10499318 Ga0105245_104993182 199
299 3300009148 Ga0105243_10529150 Ga0105243_105291502 199
300 3300009177 Ga0105248_10469573 Ga0105248_104695732 199
301 3300014325 Ga0163163_10851707 Ga0163163_108517072 199
302 3300017792 Ga0163161_10024268 Ga0163161_100242682 199
303 3300025908 Ga0207643_10101268 Ga0207643_101012682 199
304 3300025935 Ga0207709_10139791 Ga0207709_101397913 199
305 3300025937 Ga0207669_10091619 Ga0207669_100916192 199
306 3300025938 Ga0207704_10360054 Ga0207704_103600542 199
307 3300026118 Ga0207675_100102552 Ga0207675_1001025522 199
308 3300026121 Ga0207683_10847042 Ga0207683_108470422 199
309 3300028786 Ga0307517_10036318 Ga0307517_100363184 199
310 3300031507 Ga0307509_10382525 Ga0307509_103825252 199
311 3300031616 Ga0307508_10075635 Ga0307508_100756351 199
312 3300031649 Ga0307514_10074652 Ga0307514_100746522 199
313 3300031730 Ga0307516_10050128 Ga0307516_100501283 199
314 3300031903 Ga0307407_10310546 Ga0307407_103105461 199
315 3300031995 Ga0307409_100184888 Ga0307409_1001848882 199
316 3300032002 Ga0307416_100405792 Ga0307416_1004057922 199
317 3300033180 Ga0307510_10318933 Ga0307510_103189332 199
318 3300044656 Ga0466969_0112193 Ga0466969_0112193_396_1061 199
319 3300044684 Ga0466966_0039051 Ga0466966_0039051_313_942 199
320 3300044693 Ga0466961_0051112 Ga0466961_0051112_1864_2469 199
321 3300044693 Ga0466961_0294279 Ga0466961_0294279_346_975 199
322 3300044765 Ga0466970_0250307 Ga0466970_0250307_192_857 199
323 3300044901 Ga0466960_0002420 Ga0466960_0002420_3273_3878 199
324 3300045049 Ga0466959_0018250 Ga0466959_0018250_1282_1911 199
325 3300045836 Ga0466958_0032344 Ga0466958_0032344_2242_2871 199
326 3300046459 Ga0495629_0280133 Ga0495629_0280133_137_766 199
327 3300046507 Ga0495606_0003316 Ga0495606_0003316_8764_9384 199
328 3300046522 Ga0495643_0019446 Ga0495643_0019446_2475_3104 199
329 3300046616 Ga0495668_0000265 Ga0495668_0000265_41403_42023 199
330 3300046616 Ga0495668_0431091 Ga0495668_0431091_35_664 199
331 3300046674 Ga0495588_0312906 Ga0495588_0312906_15_638 199
332 3300046691 Ga0495670_0047167 Ga0495670_0047167_478_1107 199
333 3300046794 Ga0495589_0228680 Ga0495589_0228680_222_851 199
334 3300046810 Ga0495660_0070501 Ga0495660_0070501_649_1278 199
335 3300047323 Ga0495683_0000585 Ga0495683_0000585_9235_9882 199
336 3300047443 Ga0495687_014531 Ga0495687_014531_15_644 199
337 3300047443 Ga0495687_043530 Ga0495687_043530_1211_1840 199
338 3300047446 Ga0495679_054123 Ga0495679_054123_285_914 199
339 3300047447 Ga0495685_008780 Ga0495685_008780_364_993 199
340 3300047470 Ga0495681_0013840 Ga0495681_0013840_922_1551 199
341 3300047472 Ga0495686_0173003 Ga0495686_0173003_51_680 199
342 3300048091 Ga0495626_0000052 Ga0495626_0000052_30454_31074 199
343 3300053086 Ga0500578_0184700 Ga0500578_0184700_522_1151 199
344 3300053099 Ga0500654_066832 Ga0500654_066832_649_1278 199
345 3300053107 Ga0500560_029577 Ga0500560_029577_258_881 199
346 3300053109 Ga0500569_055755 Ga0500569_055755_466_1095 199
347 3300053131 Ga0500652_094142 Ga0500652_094142_603_1232 199
348 3300053134 Ga0500658_0018460 Ga0500658_0018460_1939_2568 199
349 3300053137 Ga0500561_0002143 Ga0500561_0002143_949_1578 199
350 3300053143 Ga0500579_131778 Ga0500579_131778_503_1132 199
351 3300053153 Ga0500616_0020298 Ga0500616_0020298_1024_1653 199
352 3300053160 Ga0500633_0006831 Ga0500633_0006831_1698_2327 199
353 3300053161 Ga0500634_0013868 Ga0500634_0013868_1135_1764 199
354 3300053732 Ga0500656_003100 Ga0500656_003100_773_1402 199
355 3300038443 Ga0395901_0069099 Ga0395901_0069099_519_1151 200
356 3300044656 Ga0466969_0029706 Ga0466969_0029706_761_1453 200
357 3300044684 Ga0466966_0326562 Ga0466966_0326562_100_792 200
358 3300044842 Ga0466957_0130435 Ga0466957_0130435_753_1376 200
359 3300044901 Ga0466960_0040598 Ga0466960_0040598_1505_2188 200
360 iso_pu_bacteria 2643221678 2644437166 200
361 iso_pu_bacteria 2808606359 2808842062 200
362 iso_pu_bacteria 2919468124 2919469509 200
363 3300046473 Ga0495582_0091359 Ga0495582_0091359_868_1485 201
364 3300014497 Ga0182008_10003431 Ga0182008_100034314 202
365 3300015262 Ga0182007_10000488 Ga0182007_100004884 202
366 3300015265 Ga0182005_1006787 Ga0182005_10067873 202
367 iso_pu_bacteria 2784132148 2784588567 202
368 iso_pu_bacteria 2808606448 2809232180 202
369 iso_pu_bacteria 3006486233 3006488607 202
370 iso_pu_bacteria 8023623736 8023630787 202
371 3300003316 rootH1_10047797 rootH1_100477973 204
372 3300003320 rootH2_10054733 rootH2_100547334 204
373 3300003322 rootL2_10004468 rootL2_100044684 204
374 3300003323 rootH1_10034183 rootH1_100341834 204
375 3300003323 rootH1_10034196 rootH1_100341966 204
376 3300006048 Ga0075363_100177265 Ga0075363_1001772652 204
377 3300050490 nmdc:mga03n38_3116_c1 nmdc:mga03n38_3116_c1_3408_4043 204

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

48

94

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zcn-assembly2.cif.gz_D crystal structure of icar, a repressor of the tetr family 0.7944 25 201
3egq-assembly1.cif.gz_B crystal structure of a tetr-family transcriptional regulator (af_1817) from archaeoglobus fulgidus at 2.55 a resolution 0.7842 24 200
2zcn-assembly2.cif.gz_C crystal structure of icar, a repressor of the tetr family 0.7646 25 201
2zcn-assembly2.cif.gz_D crystal structure of icar, a repressor of the tetr family 0.7641 25 201
3egq-assembly1.cif.gz_B crystal structure of a tetr-family transcriptional regulator (af_1817) from archaeoglobus fulgidus at 2.55 a resolution 0.7637 24 200
ID Description Score Start End Superfamily
5gpaA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9674 24 64 1.10.10.60
5gpcA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9573 24 64 1.10.10.60
5gpcC01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9563 24 64 1.10.10.60
5gpcB01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9559 24 64 1.10.10.60
2jj7B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.953 22 65 1.10.10.60
ID Description Score Start End GO Terms
AF-A0A656TPY2-F1-model_v4 deleted 0.9566 85 204
AF-A0A656TPY2-F1-model_v4 deleted 0.9412 85 204
AF-A0A1G6VAI9-F1-model_v4 Uncharacterized protein 0.9278 72 204
AF-A0A6J6UBD6-F1-model_v4 Unannotated protein 0.9214 9 203 GO:0000976
GO:0003700
AF-A0A0D0I0P2-F1-model_v4 HTH tetR-type domain-containing protein 0.9068 10 200 GO:0000976
GO:0003700

Feature Viewer

pLDDT pTM Quality
91.07 0.83 High
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Predicted Structure (AlphaFold2)

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