F427037

General Info

Members Datasets Scaffolds Average Seq Length
375 211 334 380

Family's Representative Sequence

Representative Sequence 3300013104|Ga0157370_10032329|Ga0157370_100323294
Length 401
Sequence VVGKVHIAWLLHHYKAVIKKQMKIGIVCYPTFGGSGVVATELGKALADNGHQVHFITYSQPARLDFFSENLFYHEVSVSQYPLFDYAPYELALSSKMVDVVRFEKLDILHVHYAIPHASAAFMAKQILATFNIHIPVVTTLHGTDITLVGRDVTYKPVVTFSINQSDGVTAVSEDLRKSTYDHFEITKDIRVIPNFIDHNRFSLKPKDHFKKAIAPQGERILAHTSNFRKVKRTQDVMYVFQKVLKKVPAKLLMVGDGPERVNCEQLARELGICEHVRFLGKQDAVEEILSVSDLFLMPSASESFGLAALEAMACKVPVVCSNTGGLPELNIDGVTGFMDNVGDVNSMAEHAIYILQDDARLAQFKENALNRAKEFDLDRILPMYENFYNEVIGASKIAVA

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2585427687 Pedobacter borealis DSM 19626 Isolate Rhizosphere
3 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
4 2721755487 Sphingobacterium sp. B29 Isolate Rhizosphere
5 2738541283 Pedobacter sp. OK701 Isolate Unclassified
6 2738541284 Pedobacter sp. YR016 Isolate Unclassified
7 2738541302 Pedobacter sp. CF074 Isolate Unclassified
8 2738543023 Pedobacter sp. OK628 Isolate Unclassified
9 2739367651 Pedobacter sp. OK291 Isolate Unclassified
10 2739367656 Pedobacter sp. CF523 Isolate Unclassified
11 2739367663 Pedobacter sp. YR510 Isolate Unclassified
12 2775506987 Pedobacter ginsengisoli T01R-27 Isolate Unclassified
13 2818991437 Pedobacter terrae 518 Isolate Unclassified
14 2842722452 Pedobacter sp. R-72249 Isolate Unclassified
15 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
16 2842909656 Pedobacter sp. R-72393 Isolate Unclassified
17 2849281842 Pedobacter sp. AK013 Isolate Rhizosphere
18 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
19 2852627209 Pedobacter sp. AK017 Isolate Rhizosphere
20 2857627736 Pedobacter sp. R-74587 Isolate Unclassified
21 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
22 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
23 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
24 2896317667 Sphingobacterium sp. SGR-19 Isolate Rhizosphere
25 2896344016 Sphingobacterium sp. SGL-16 Isolate Rhizosphere
26 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
27 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
28 2904445276 Pedobacter terrae 1734 Isolate Rhizosphere
29 2904780799 Sphingobacterium sp. 1304 Isolate Rhizosphere
30 2919177583 Sphingobacterium sp. 2149 Isolate Rhizosphere
31 2919186247 Pedobacter africanus 2697 Isolate Rhizosphere
32 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
33 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
34 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
35 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
36 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
37 2939664404 Pedobacter africanus 2990 Isolate Rhizosphere
38 2945997725 Pedobacter sp. W3I1 Isolate Rhizosphere
39 2954016120 Flavobacterium sp. W4I14 Isolate Rhizosphere
40 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
41 3003233435 Sphingobacterium shayense CrR18 Isolate Unclassified
42 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
43 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
44 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
45 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
46 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
47 3300002773 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS Metagenome Endosphere
48 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
49 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
50 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
51 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
52 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
53 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
54 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
55 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
56 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
57 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
58 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
59 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
60 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
61 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
62 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
63 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
64 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
65 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
66 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
67 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
68 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
69 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
70 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
71 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
72 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
73 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
74 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
75 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
76 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
77 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
78 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
79 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
80 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
81 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
82 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
83 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
84 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
85 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
86 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
87 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
88 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
89 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
90 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
91 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
92 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
93 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
94 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
95 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
96 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
97 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
98 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
99 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
100 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
101 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
102 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
103 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
104 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
105 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
106 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
107 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
108 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
109 3300015682 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A01 Metagenome Rhizosphere
110 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
111 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
113 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
114 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
115 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
116 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
117 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
118 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
119 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
120 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
122 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
147 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
148 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
149 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
150 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
151 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
152 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
153 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
154 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
155 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
156 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
157 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
158 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
159 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
160 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
161 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
162 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
163 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
164 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
165 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
166 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
167 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
168 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
169 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
170 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
171 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
172 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
173 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
174 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
175 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
176 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
177 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
178 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
179 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
180 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
181 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
182 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
183 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
184 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
185 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
186 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
187 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
188 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
189 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
190 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
191 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
192 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
193 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
194 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
195 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
196 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
197 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
198 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
199 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
200 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
201 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
202 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
203 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
204 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
205 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
206 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
207 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
208 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
209 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
210 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
211 8055588893 Parapedobacter lycopersici KACC 18788 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.53
Metatranscriptomes 0.53
Isolates 10.93

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8
Nodule 0
Rhizoplane 0.27
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 11.73

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1252635 2162886007 Bacteria 9423
2 JGI24736J21556_1001298 3300001904 Bacteria 4576
3 JGI24736J21556_1009607 3300001904 Bacteria 1591
4 JGI24737J22298_10002579 3300001990 Bacteria 6430
5 JGI24737J22298_10006572 3300001990 Bacteria 3962
6 JGI24737J22298_10007303 3300001990 Unclassified 3734
7 JGI24735J21928_10000007 3300002067 Bacteria 333510
8 JGI24735J21928_10004468 3300002067 Bacteria 4701
9 JGI25162J39368_1000008 3300002737 Bacteria 397212
10 JGI25162J39368_1000697 3300002737 Bacteria 23315
11 JGI25164J39214_1001722 3300002772 Bacteria 4402
12 JGI25152J39213_1000345 3300002773 Bacteria 29225
13 JGI25150J39212_1000011 3300002774 Bacteria 195312
14 JGI25151J46595_10000033 3300003187 Bacteria 195312
15 JGI25165J46597_1000658 3300003214 Bacteria 28305
16 JGI25153J46596_10000052 3300003215 Bacteria 139303
17 rootH1_10037104 3300003316 Bacteria 8750
18 rootH2_10024240 3300003320 Bacteria 36961
19 rootH2_10121175 3300003320 Bacteria 8440
20 rootL2_10043792 3300003322 Bacteria 6679
21 rootL2_10125075 3300003322 Bacteria 2483
22 rootH1_10089843 3300003323 Bacteria 2803
23 rootH1_10101118 3300003323 Bacteria 1791
24 rootH1_10110683 3300003323 Bacteria 2684
25 rootH1_10176828 3300003323 Bacteria 3600
26 Ga0058863_10054301 3300004799 Bacteria 7436
27 Ga0058862_11031922 3300004803 Bacteria 2607
28 Ga0065714_10002205 3300005288 Bacteria 57702
29 Ga0065714_10002344 3300005288 Bacteria 34779
30 Ga0065714_10002764 3300005288 Bacteria 25876
31 Ga0065714_10004360 3300005288 Bacteria 9460
32 Ga0065714_10004366 3300005288 Bacteria 6950
33 Ga0065714_10079682 3300005288 Bacteria 2495
34 Ga0065704_10070225 3300005289 Bacteria 60561
35 Ga0065704_10075206 3300005289 Bacteria 5726
36 Ga0070658_10000069 3300005327 Bacteria 101140
37 Ga0070658_10169783 3300005327 Bacteria 1832
38 Ga0070676_10000133 3300005328 Bacteria 28281
39 Ga0070683_100018541 3300005329 Bacteria 6167
40 Ga0068869_100228911 3300005334 Bacteria 1476
41 Ga0068868_100021982 3300005338 Bacteria 4809
42 Ga0070660_100011431 3300005339 Bacteria 6306
43 Ga0070660_100023297 3300005339 Bacteria 4587
44 Ga0070671_100008421 3300005355 Bacteria 8267
45 Ga0070674_100062024 3300005356 Bacteria 2611
46 Ga0070673_100002145 3300005364 Bacteria 11952
47 Ga0070659_100000455 3300005366 Bacteria 30281
48 Ga0070659_100014247 3300005366 Bacteria 5936
49 Ga0070663_100001112 3300005455 Bacteria 14779
50 Ga0070678_100057804 3300005456 Bacteria 2844
51 Ga0070662_100000003 3300005457 Bacteria 239813
52 Ga0070681_10003922 3300005458 Bacteria 14023
53 Ga0068867_100000624 3300005459 Bacteria 23370
54 Ga0070679_100003574 3300005530 Bacteria 14234
55 Ga0070684_100031880 3300005535 Bacteria 4489
56 Ga0068853_100059404 3300005539 Bacteria 3303
57 Ga0070665_100000212 3300005548 Bacteria 100019
58 Ga0068855_100000141 3300005563 Bacteria 92463
59 Ga0068855_100021086 3300005563 Bacteria 7812
60 Ga0068855_100037827 3300005563 Bacteria 5735
61 Ga0068855_100218277 3300005563 Bacteria 2140
62 Ga0068857_100031642 3300005577 Bacteria 4676
63 Ga0068854_100085595 3300005578 Bacteria 2335
64 Ga0068856_100000036 3300005614 Bacteria 121468
65 Ga0068856_100009754 3300005614 Bacteria 9329
66 Ga0068856_100078543 3300005614 Bacteria 3272
67 Ga0068856_100477094 3300005614 Bacteria 1268
68 Ga0068852_100004400 3300005616 Bacteria 9958
69 Ga0068851_10000010 3300005834 Bacteria 202121
70 Ga0075366_10095131 3300006195 Bacteria 1786
71 Ga0097621_100000205 3300006237 Bacteria 38617
72 Ga0068871_100000162 3300006358 Bacteria 44419
73 Ga0068865_100000075 3300006881 Bacteria 51751
74 Ga0105244_10017451 3300009036 Bacteria 4055
75 Ga0105240_10001259 3300009093 Bacteria 43960
76 Ga0105240_10015516 3300009093 Bacteria 10357
77 Ga0105240_10044265 3300009093 Bacteria 5658
78 Ga0105240_10137892 3300009093 Bacteria 2919
79 Ga0105240_10490252 3300009093 Bacteria 1368
80 Ga0105243_10000018 3300009148 Bacteria 227618
81 Ga0105241_10000926 3300009174 Bacteria 22230
82 Ga0105241_10003192 3300009174 Bacteria 12201
83 Ga0105241_10043311 3300009174 Bacteria 3409
84 Ga0105241_10122831 3300009174 Bacteria 2093
85 Ga0105242_10330986 3300009176 Bacteria 1400
86 Ga0105237_10000402 3300009545 Bacteria 61603
87 Ga0105237_10001172 3300009545 Bacteria 35046
88 Ga0105237_10001805 3300009545 Bacteria 27621
89 Ga0105237_10003033 3300009545 Bacteria 20261
90 Ga0105237_10013163 3300009545 Bacteria 8679
91 Ga0105237_10070724 3300009545 Bacteria 3485
92 Ga0105237_10139942 3300009545 Bacteria 2414
93 Ga0105237_10203937 3300009545 Bacteria 1978
94 Ga0105237_10299923 3300009545 Bacteria 1610
95 Ga0105238_10000836 3300009551 Bacteria 31890
96 Ga0105238_10372148 3300009551 Bacteria 1419
97 Ga0105239_10000016 3300010375 Bacteria 293142
98 Ga0105239_10000045 3300010375 Bacteria 186314
99 Ga0105239_10000285 3300010375 Bacteria 74551
100 Ga0105239_10005254 3300010375 Bacteria 15232
101 Ga0105239_10041274 3300010375 Bacteria 5057
102 Ga0105239_10096420 3300010375 Bacteria 3268
103 Ga0105239_10261862 3300010375 Bacteria 1944
104 Ga0105239_10343816 3300010375 Bacteria 1684
105 Ga0157373_10000325 3300013100 Bacteria 38624
106 Ga0157373_10003775 3300013100 Bacteria 11463
107 Ga0157373_10006127 3300013100 Bacteria 8992
108 Ga0157373_10010983 3300013100 Bacteria 6667
109 Ga0157373_10047129 3300013100 Bacteria 3075
110 Ga0157373_10066418 3300013100 Bacteria 2552
111 Ga0157373_10137364 3300013100 Bacteria 1719
112 Ga0157371_10000482 3300013102 Bacteria 48630
113 Ga0157371_10006648 3300013102 Bacteria 9472
114 Ga0157371_10009398 3300013102 Bacteria 7699
115 Ga0157371_10010698 3300013102 Bacteria 7124
116 Ga0157371_10014019 3300013102 Bacteria 6068
117 Ga0157370_10000084 3300013104 Bacteria 104159
118 Ga0157370_10002074 3300013104 Bacteria 24535
119 Ga0157370_10020538 3300013104 Bacteria 6594
120 Ga0157370_10025373 3300013104 Bacteria 5867
121 Ga0157370_10032329 3300013104 Bacteria 5109
122 Ga0157370_10065799 3300013104 Bacteria 3429
123 Ga0157370_10078501 3300013104 Bacteria 3109
124 Ga0157370_10100136 3300013104 Bacteria 2715
125 Ga0157370_10353441 3300013104 Bacteria 1354
126 Ga0157369_10000285 3300013105 Bacteria 67687
127 Ga0157369_10004431 3300013105 Bacteria 16571
128 Ga0157369_10016184 3300013105 Bacteria 8395
129 Ga0157369_10220300 3300013105 Bacteria 1986
130 Ga0157374_10000897 3300013296 Bacteria 25951
131 Ga0157378_10053220 3300013297 Bacteria 3605
132 Ga0157378_10403151 3300013297 Bacteria 1348
133 Ga0163162_10000041 3300013306 Bacteria 132375
134 Ga0163162_10000073 3300013306 Bacteria 91871
135 Ga0163162_10004821 3300013306 Bacteria 13020
136 Ga0163162_10005366 3300013306 Bacteria 12374
137 Ga0163162_10067822 3300013306 Bacteria 3618
138 Ga0163162_10073475 3300013306 Bacteria 3475
139 Ga0157372_10000029 3300013307 Bacteria 180371
140 Ga0157372_10002401 3300013307 Bacteria 20287
141 Ga0157372_10009148 3300013307 Bacteria 10522
142 Ga0157372_10024957 3300013307 Bacteria 6497
143 Ga0157372_10100712 3300013307 Bacteria 3297
144 Ga0157375_10116766 3300013308 Bacteria 2773
145 Ga0182008_10000002 3300014497 Bacteria 480216
146 Ga0182008_10000112 3300014497 Bacteria 62174
147 Ga0182008_10001730 3300014497 Bacteria 14328
148 Ga0182008_10005120 3300014497 Bacteria 7525
149 Ga0182008_10017608 3300014497 Bacteria 3706
150 Ga0182006_1000209 3300015261 Bacteria 58193
151 Ga0182006_1000236 3300015261 Bacteria 52217
152 Ga0182006_1000386 3300015261 Bacteria 36392
153 Ga0182007_10000016 3300015262 Bacteria 202375
154 Ga0182007_10019252 3300015262 Bacteria 2457
155 Ga0182007_10046113 3300015262 Bacteria 1444
156 Ga0183373_1011 3300015682 Bacteria 138873
157 Ga0163161_10000844 3300017792 Bacteria 23904
158 Ga0163161_10003492 3300017792 Bacteria 11009
159 Ga0163161_10004024 3300017792 Bacteria 10289
160 Ga0163161_10009059 3300017792 Bacteria 6885
161 Ga0163161_10017468 3300017792 Bacteria 5020
162 Ga0163161_10067312 3300017792 Bacteria 2616
163 Ga0209563_105900 3300025230 Bacteria 2162
164 Ga0207427_100109 3300025231 Bacteria 116061
165 Ga0209437_100030 3300025233 Bacteria 532466
166 Ga0209437_100096 3300025233 Bacteria 233558
167 Ga0207425_1000003 3300025245 Bacteria 1145342
168 Ga0209026_1000243 3300025250 Bacteria 69921
169 Ga0209026_1006780 3300025250 Bacteria 2724
170 Ga0209129_1000076 3300025258 Bacteria 195353
171 Ga0209129_1011965 3300025258 Bacteria 2031
172 Ga0209233_1000029 3300025261 Bacteria 641642
173 Ga0209233_1000657 3300025261 Bacteria 16808
174 Ga0209025_1000007 3300025294 Bacteria 1145109
175 Ga0209758_1000114 3300025297 Bacteria 199324
176 Ga0207656_10000029 3300025321 Bacteria 69992
177 Ga0207655_1018196 3300025728 Bacteria 3744
178 Ga0207647_10000080 3300025904 Bacteria 71854
179 Ga0207647_10000698 3300025904 Bacteria 26307
180 Ga0207645_10000014 3300025907 Bacteria 117512
181 Ga0207705_10000293 3300025909 Bacteria 46583
182 Ga0207654_10194760 3300025911 Bacteria 1331
183 Ga0207707_10005965 3300025912 Bacteria 10658
184 Ga0207695_10000183 3300025913 Bacteria 181350
185 Ga0207695_10007128 3300025913 Bacteria 14312
186 Ga0207695_10026101 3300025913 Bacteria 6525
187 Ga0207695_10064898 3300025913 Bacteria 3756
188 Ga0207695_10126527 3300025913 Bacteria 2517
189 Ga0207695_10143063 3300025913 Bacteria 2338
190 Ga0207695_10196168 3300025913 Bacteria 1935
191 Ga0207671_10000477 3300025914 Bacteria 54330
192 Ga0207671_10001285 3300025914 Bacteria 29512
193 Ga0207671_10002346 3300025914 Bacteria 20402
194 Ga0207671_10003421 3300025914 Bacteria 15844
195 Ga0207671_10003820 3300025914 Bacteria 14742
196 Ga0207671_10010611 3300025914 Bacteria 7584
197 Ga0207671_10069436 3300025914 Bacteria 2626
198 Ga0207671_10078863 3300025914 Bacteria 2467
199 Ga0207657_10041514 3300025919 Bacteria 4068
200 Ga0207657_10090475 3300025919 Bacteria 2554
201 Ga0207644_10014918 3300025931 Bacteria 5209
202 Ga0207690_10000190 3300025932 Bacteria 47477
203 Ga0207690_10015487 3300025932 Bacteria 4622
204 Ga0207706_10000009 3300025933 Bacteria 200607
205 Ga0207669_10045157 3300025937 Bacteria 2594
206 Ga0207704_10000976 3300025938 Bacteria 12680
207 Ga0207667_10000030 3300025949 Bacteria 327226
208 Ga0207667_10000171 3300025949 Bacteria 95554
209 Ga0207667_10020009 3300025949 Bacteria 7456
210 Ga0207667_10165456 3300025949 Bacteria 2274
211 Ga0207651_10008607 3300025960 Bacteria 5522
212 Ga0207640_10006335 3300025981 Bacteria 6490
213 Ga0207703_10240611 3300026035 Bacteria 1627
214 Ga0207639_10017486 3300026041 Bacteria 5083
215 Ga0207639_10085645 3300026041 Bacteria 2507
216 Ga0207678_10003062 3300026067 Bacteria 15111
217 Ga0207702_10000088 3300026078 Bacteria 105505
218 Ga0207702_10012115 3300026078 Bacteria 7173
219 Ga0207702_10128562 3300026078 Bacteria 2277
220 Ga0207648_10000963 3300026089 Bacteria 32564
221 Ga0207674_10015419 3300026116 Bacteria 8396
222 Ga0207683_10079793 3300026121 Bacteria 2902
223 Ga0268266_10000177 3300028379 Bacteria 114318
224 Ga0307517_10000553 3300028786 Bacteria 63892
225 Ga0307515_10016025 3300028794 Bacteria 13756
226 Ga0307515_10029848 3300028794 Bacteria 9191
227 Ga0307515_10038444 3300028794 Bacteria 7655
228 Ga0265338_10049383 3300028800 Bacteria 3815
229 Ga0316177_1124612 3300030731 Bacteria 2932
230 Ga0316183_1106482 3300030742 Bacteria 31361
231 Ga0265327_10002715 3300031251 Bacteria 18113
232 Ga0307509_10021070 3300031507 Bacteria 7380
233 Ga0307408_100000527 3300031548 Bacteria 33024
234 Ga0307408_100001764 3300031548 Bacteria 15800
235 Ga0307408_100004681 3300031548 Bacteria 9240
236 Ga0307405_10000023 3300031731 Bacteria 141450
237 Ga0307405_10008331 3300031731 Bacteria 5245
238 Ga0307407_10000016 3300031903 Bacteria 141499
239 Ga0307412_10000085 3300031911 Bacteria 88692
240 Ga0307416_100000036 3300032002 Bacteria 141505
241 Ga0307416_100133810 3300032002 Bacteria 2238
242 Ga0307414_10000510 3300032004 Bacteria 20231
243 Ga0307414_10001132 3300032004 Bacteria 13647
244 Ga0307414_10010285 3300032004 Bacteria 5420
245 Ga0307414_10014313 3300032004 Bacteria 4752
246 Ga0307414_10021251 3300032004 Bacteria 4067
247 Ga0307414_10040566 3300032004 Bacteria 3146
248 Ga0307414_10049193 3300032004 Bacteria 2913
249 Ga0307414_10056273 3300032004 Bacteria 2758
250 Ga0307414_10090214 3300032004 Bacteria 2274
251 Ga0307507_10000143 3300033179 Bacteria 124248
252 Ga0307510_10000172 3300033180 Bacteria 54812
253 Ga0395899_0000017 3300037312 Bacteria 440179
254 Ga0395899_0000695 3300037312 Bacteria 33854
255 Ga0395899_0004169 3300037312 Bacteria 11353
256 Ga0395900_0000609 3300037418 Bacteria 48753
257 Ga0395900_0000658 3300037418 Bacteria 46240
258 Ga0395900_0204224 3300037418 Bacteria 1998
259 Ga0395900_0456072 3300037418 Bacteria 1234
260 Ga0395905_0001534 3300037471 Bacteria 27647
261 Ga0395905_0004172 3300037471 Bacteria 15110
262 Ga0395901_0001092 3300038443 Bacteria 28865
263 Ga0395901_0001153 3300038443 Bacteria 28037
264 Ga0395901_0281220 3300038443 Bacteria 1729
265 Ga0436361_1159520 3300039447 Bacteria 26518
266 Ga0439448_0004364 3300042005 Bacteria 3993
267 Ga0451577_0113692 3300042876 Bacteria 2423
268 Ga0466966_0008055 3300044684 Bacteria 6983
269 Ga0453684_0084507 3300044712 Bacteria 3946
270 Ga0466959_0043774 3300045049 Bacteria 3299
271 Ga0495651_0105302 3300046462 Bacteria 2092
272 Ga0495650_0000081 3300046471 Bacteria 240957
273 Ga0495585_0006975 3300046492 Bacteria 6954
274 Ga0495607_0076459 3300046501 Bacteria 1852
275 Ga0495583_0053225 3300046506 Bacteria 1838
276 Ga0495606_0003028 3300046507 Bacteria 18381
277 Ga0495606_0008540 3300046507 Bacteria 8872
278 Ga0495606_0013735 3300046507 Bacteria 6375
279 Ga0495606_0061018 3300046507 Bacteria 2413
280 Ga0495610_0000098 3300046512 Bacteria 101620
281 Ga0495610_0000119 3300046512 Bacteria 89692
282 Ga0495610_0008137 3300046512 Bacteria 6848
283 Ga0495616_0000921 3300046513 Bacteria 21150
284 Ga0495616_0001449 3300046513 Bacteria 16512
285 Ga0495631_0039718 3300046518 Bacteria 2086
286 Ga0495637_0011602 3300046520 Bacteria 4230
287 Ga0495648_0050063 3300046524 Bacteria 2556
288 Ga0495652_0107244 3300046529 Bacteria 2254
289 Ga0495652_0135774 3300046529 Bacteria 1941
290 Ga0495609_0003122 3300046538 Bacteria 9677
291 Ga0495633_0000785 3300046558 Bacteria 28402
292 Ga0495633_0029773 3300046558 Bacteria 2655
293 Ga0495668_0000017 3300046616 Bacteria 434025
294 Ga0495668_0110865 3300046616 Bacteria 1501
295 Ga0495625_0000049 3300046660 Bacteria 197646
296 Ga0495625_0000901 3300046660 Bacteria 39985
297 Ga0495625_0001789 3300046660 Bacteria 24694
298 Ga0495625_0002512 3300046660 Bacteria 19754
299 Ga0495625_0008913 3300046660 Bacteria 8481
300 Ga0495625_0074203 3300046660 Bacteria 2383
301 Ga0495625_0083205 3300046660 Bacteria 2225
302 Ga0495625_0109270 3300046660 Bacteria 1892
303 Ga0495661_0000946 3300046665 Bacteria 26340
304 Ga0495661_0020657 3300046665 Bacteria 4296
305 Ga0495661_0056893 3300046665 Bacteria 2337
306 Ga0495670_0047501 3300046691 Bacteria 2146
307 Ga0495649_0000014 3300046694 Bacteria 287408
308 Ga0495660_0001895 3300046810 Bacteria 13721
309 Ga0495683_0032290 3300047323 Bacteria 2667
310 Ga0495687_000409 3300047443 Bacteria 53157
311 Ga0495687_037868 3300047443 Bacteria 2145
312 Ga0495686_0008839 3300047472 Bacteria 7333
313 Ga0495686_0029000 3300047472 Bacteria 3602
314 Ga0496116_0002809 3300048919 Bacteria 17884
315 Ga0496117_0001260 3300048920 Bacteria 37607
316 Ga0496118_0026923 3300048921 Bacteria 4882
317 Ga0496122_0000837 3300048925 Bacteria 58147
318 Ga0496122_0007970 3300048925 Bacteria 11578
319 Ga0496123_0009274 3300048926 Bacteria 8884
320 Ga0496123_0013980 3300048926 Bacteria 6685
321 Ga0496125_0056810 3300048928 Bacteria 3175
322 Ga0495678_008842 3300049459 Bacteria 5036
323 Ga0495682_0004339 3300049460 Bacteria 6094
324 Ga0501223_003711 3300049663 Bacteria 3300
325 nmdc:mga0k408_25346_c1 3300050493 Bacteria 3359
326 nmdc:mga0k408_63_c1 3300050493 Bacteria 52809
327 nmdc:mga07m45_159702_c1 3300050496 Bacteria 1308
328 Ga0500635_0001524 3300053080 Bacteria 5571
329 Ga0500651_0000589 3300053093 Bacteria 18247
330 Ga0500608_002924 3300053122 Bacteria 6320
331 Ga0500608_027020 3300053122 Bacteria 2702
332 Ga0500618_000021 3300053125 Bacteria 160813
333 Ga0500622_0004434 3300053156 Bacteria 8820
334 Ga0500634_0066212 3300053161 Bacteria 1904

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300003323 rootH1_10101118 rootH1_101011182 335
2 3300037418 Ga0395900_0456072 Ga0395900_0456072_179_1216 345
3 3300004803 Ga0058862_11031922 Ga0058862_110319222 364
4 iso_pu_bacteria 2902048731 2902049776 371
5 iso_pu_bacteria 2852623160 2852625737 373
6 iso_pu_bacteria 2884933994 2884935738 373
7 iso_pu_bacteria 2896317667 2896321166 373
8 iso_pu_bacteria 2896344016 2896345712 373
9 iso_pu_bacteria 2898713307 2898713333 373
10 iso_pu_bacteria 2919692658 2919693404 374
11 iso_pu_bacteria 2977232053 2977235245 374
12 iso_pu_bacteria 3003233435 3003235195 374
13 iso_pu_bacteria 8055588893 8055590157 374
14 iso_pu_bacteria 2721755487 2722726540 375
15 iso_pu_bacteria 2857627736 2857632610 375
16 iso_pu_bacteria 2884634485 2884637434 375
17 iso_pu_bacteria 2890737413 2890737640 375
18 iso_pu_bacteria 2904780799 2904785646 375
19 iso_pu_bacteria 2919177583 2919182336 375
20 iso_pu_bacteria 2585427687 2586210815 376
21 iso_pu_bacteria 2599185184 2599479882 376
22 iso_pu_bacteria 2738541302 2738854297 376
23 iso_pu_bacteria 2739367651 2739587401 376
24 iso_pu_bacteria 2739367656 2739614447 376
25 iso_pu_bacteria 2739367663 2739646595 376
26 iso_pu_bacteria 2818991437 2819550239 376
27 iso_pu_bacteria 2842722452 2842726846 376
28 iso_pu_bacteria 2842903701 2842904774 376
29 iso_pu_bacteria 2842909656 2842911688 376
30 iso_pu_bacteria 2849281842 2849285049 376
31 iso_pu_bacteria 2904445276 2904448864 376
32 iso_pu_bacteria 2919437846 2919440073 376
33 iso_pu_bacteria 2928078545 2928081012 376
34 iso_pu_bacteria 2928147474 2928152571 376
35 iso_pu_bacteria 2932082852 2932087377 376
36 iso_pu_bacteria 2945997725 2946002833 376
37 iso_pu_bacteria 2954016120 2954019699 376
38 3300013297 Ga0157378_10403151 Ga0157378_104031511 377
39 3300031548 Ga0307408_100001764 Ga0307408_1000017649 377
40 3300031548 Ga0307408_100004681 Ga0307408_1000046812 377
41 3300031731 Ga0307405_10008331 Ga0307405_100083314 377
42 3300032002 Ga0307416_100133810 Ga0307416_1001338101 377
43 3300032004 Ga0307414_10049193 Ga0307414_100491931 377
44 3300032004 Ga0307414_10056273 Ga0307414_100562733 377
45 3300032004 Ga0307414_10090214 Ga0307414_100902142 377
46 3300049663 Ga0501223_003711 Ga0501223_003711_348_1481 377
47 iso_pu_bacteria 2738541283 2738758892 377
48 iso_pu_bacteria 2738541284 2738762018 377
49 iso_pu_bacteria 2738543023 2739302008 377
50 iso_pu_bacteria 2775506987 2776615337 377
51 iso_pu_bacteria 2919186247 2919188984 377
52 iso_pu_bacteria 2939664404 2939666861 377
53 3300005288 Ga0065714_10079682 Ga0065714_100796822 378
54 3300031251 Ga0265327_10002715 Ga0265327_100027154 378
55 3300032004 Ga0307414_10040566 Ga0307414_100405662 378
56 3300046507 Ga0495606_0013735 Ga0495606_0013735_1837_2973 378
57 3300046660 Ga0495625_0083205 Ga0495625_0083205_537_1673 378
58 3300046691 Ga0495670_0047501 Ga0495670_0047501_47_1186 378
59 3300001904 JGI24736J21556_1001298 JGI24736J21556_10012983 379
60 3300001990 JGI24737J22298_10006572 JGI24737J22298_100065723 379
61 3300002067 JGI24735J21928_10004468 JGI24735J21928_100044683 379
62 3300003322 rootL2_10043792 rootL2_100437923 379
63 3300003323 rootH1_10110683 rootH1_101106832 379
64 3300004799 Ga0058863_10054301 Ga0058863_100543015 379
65 3300005327 Ga0070658_10169783 Ga0070658_101697831 379
66 3300005329 Ga0070683_100018541 Ga0070683_1000185414 379
67 3300005339 Ga0070660_100011431 Ga0070660_1000114317 379
68 3300005356 Ga0070674_100062024 Ga0070674_1000620242 379
69 3300005366 Ga0070659_100000455 Ga0070659_10000045522 379
70 3300005366 Ga0070659_100014247 Ga0070659_1000142471 379
71 3300005458 Ga0070681_10003922 Ga0070681_1000392212 379
72 3300005530 Ga0070679_100003574 Ga0070679_10000357412 379
73 3300005535 Ga0070684_100031880 Ga0070684_1000318802 379
74 3300005563 Ga0068855_100000141 Ga0068855_10000014155 379
75 3300005563 Ga0068855_100218277 Ga0068855_1002182772 379
76 3300005577 Ga0068857_100031642 Ga0068857_1000316422 379
77 3300005614 Ga0068856_100000036 Ga0068856_10000003675 379
78 3300005614 Ga0068856_100009754 Ga0068856_1000097543 379
79 3300005614 Ga0068856_100477094 Ga0068856_1004770941 379
80 3300006195 Ga0075366_10095131 Ga0075366_100951312 379
81 3300009093 Ga0105240_10490252 Ga0105240_104902521 379
82 3300009148 Ga0105243_10000018 Ga0105243_10000018133 379
83 3300009174 Ga0105241_10043311 Ga0105241_100433114 379
84 3300009174 Ga0105241_10122831 Ga0105241_101228312 379
85 3300009545 Ga0105237_10001172 Ga0105237_100011727 379
86 3300009545 Ga0105237_10070724 Ga0105237_100707242 379
87 3300010375 Ga0105239_10000045 Ga0105239_10000045126 379
88 3300010375 Ga0105239_10343816 Ga0105239_103438162 379
89 3300013100 Ga0157373_10006127 Ga0157373_100061274 379
90 3300013100 Ga0157373_10010983 Ga0157373_100109833 379
91 3300013100 Ga0157373_10047129 Ga0157373_100471293 379
92 3300013102 Ga0157371_10010698 Ga0157371_100106984 379
93 3300013104 Ga0157370_10002074 Ga0157370_1000207425 379
94 3300013104 Ga0157370_10065799 Ga0157370_100657993 379
95 3300013307 Ga0157372_10009148 Ga0157372_100091481 379
96 3300025261 Ga0209233_1000657 Ga0209233_10006572 379
97 3300025904 Ga0207647_10000080 Ga0207647_1000008061 379
98 3300025912 Ga0207707_10005965 Ga0207707_100059658 379
99 3300025913 Ga0207695_10064898 Ga0207695_100648983 379
100 3300025913 Ga0207695_10196168 Ga0207695_101961682 379
101 3300025914 Ga0207671_10010611 Ga0207671_100106116 379
102 3300025914 Ga0207671_10078863 Ga0207671_100788634 379
103 3300025919 Ga0207657_10041514 Ga0207657_100415145 379
104 3300025932 Ga0207690_10000190 Ga0207690_1000019024 379
105 3300025932 Ga0207690_10015487 Ga0207690_100154872 379
106 3300025937 Ga0207669_10045157 Ga0207669_100451572 379
107 3300025949 Ga0207667_10000030 Ga0207667_1000003078 379
108 3300025949 Ga0207667_10000171 Ga0207667_1000017189 379
109 3300025949 Ga0207667_10165456 Ga0207667_101654562 379
110 3300026078 Ga0207702_10000088 Ga0207702_1000008839 379
111 3300026078 Ga0207702_10012115 Ga0207702_1001211510 379
112 3300026116 Ga0207674_10015419 Ga0207674_100154196 379
113 3300028794 Ga0307515_10038444 Ga0307515_100384445 379
114 3300031507 Ga0307509_10021070 Ga0307509_100210701 379
115 3300037418 Ga0395900_0000609 Ga0395900_0000609_37152_38291 379
116 3300037471 Ga0395905_0001534 Ga0395905_0001534_5384_6523 379
117 3300038443 Ga0395901_0001092 Ga0395901_0001092_8698_9837 379
118 3300046506 Ga0495583_0053225 Ga0495583_0053225_174_1313 379
119 3300046513 Ga0495616_0001449 Ga0495616_0001449_6820_7989 379
120 3300046524 Ga0495648_0050063 Ga0495648_0050063_897_2066 379
121 3300046660 Ga0495625_0074203 Ga0495625_0074203_795_1934 379
122 3300047472 Ga0495686_0008839 Ga0495686_0008839_3630_4769 379
123 3300047472 Ga0495686_0029000 Ga0495686_0029000_1969_3108 379
124 3300048919 Ga0496116_0002809 Ga0496116_0002809_14058_15200 379
125 3300048920 Ga0496117_0001260 Ga0496117_0001260_11734_12876 379
126 3300048921 Ga0496118_0026923 Ga0496118_0026923_1448_2590 379
127 3300048925 Ga0496122_0007970 Ga0496122_0007970_4712_5854 379
128 3300048926 Ga0496123_0013980 Ga0496123_0013980_3468_4610 379
129 3300048928 Ga0496125_0056810 Ga0496125_0056810_1304_2446 379
130 3300049459 Ga0495678_008842 Ga0495678_008842_821_1990 379
131 3300050493 nmdc:mga0k408_25346_c1 nmdc:mga0k408_25346_c1_1606_2745 379
132 3300053125 Ga0500618_000021 Ga0500618_000021_115596_116735 379
133 3300053156 Ga0500622_0004434 Ga0500622_0004434_6601_7740 379
134 3300001904 JGI24736J21556_1009607 JGI24736J21556_10096071 380
135 3300001990 JGI24737J22298_10002579 JGI24737J22298_100025793 380
136 3300001990 JGI24737J22298_10007303 JGI24737J22298_100073033 380
137 3300002067 JGI24735J21928_10000007 JGI24735J21928_1000000780 380
138 3300002737 JGI25162J39368_1000697 JGI25162J39368_10006971 380
139 3300002772 JGI25164J39214_1001722 JGI25164J39214_10017222 380
140 3300002773 JGI25152J39213_1000345 JGI25152J39213_10003451 380
141 3300002774 JGI25150J39212_1000011 JGI25150J39212_100001128 380
142 3300003187 JGI25151J46595_10000033 JGI25151J46595_1000003328 380
143 3300003214 JGI25165J46597_1000658 JGI25165J46597_100065818 380
144 3300003215 JGI25153J46596_10000052 JGI25153J46596_1000005296 380
145 3300003316 rootH1_10037104 rootH1_100371048 380
146 3300003320 rootH2_10024240 rootH2_1002424028 380
147 3300003320 rootH2_10121175 rootH2_101211756 380
148 3300003322 rootL2_10125075 rootL2_101250752 380
149 3300003323 rootH1_10089843 rootH1_100898431 380
150 3300003323 rootH1_10176828 rootH1_101768283 380
151 3300005288 Ga0065714_10002205 Ga0065714_1000220512 380
152 3300005288 Ga0065714_10004366 Ga0065714_100043661 380
153 3300005327 Ga0070658_10000069 Ga0070658_1000006921 380
154 3300005328 Ga0070676_10000133 Ga0070676_1000013312 380
155 3300005334 Ga0068869_100228911 Ga0068869_1002289111 380
156 3300005338 Ga0068868_100021982 Ga0068868_1000219822 380
157 3300005339 Ga0070660_100023297 Ga0070660_1000232973 380
158 3300005355 Ga0070671_100008421 Ga0070671_1000084213 380
159 3300005364 Ga0070673_100002145 Ga0070673_1000021456 380
160 3300005455 Ga0070663_100001112 Ga0070663_10000111210 380
161 3300005456 Ga0070678_100057804 Ga0070678_1000578042 380
162 3300005457 Ga0070662_100000003 Ga0070662_100000003119 380
163 3300005459 Ga0068867_100000624 Ga0068867_10000062413 380
164 3300005539 Ga0068853_100059404 Ga0068853_1000594042 380
165 3300005548 Ga0070665_100000212 Ga0070665_10000021251 380
166 3300005563 Ga0068855_100021086 Ga0068855_1000210865 380
167 3300005563 Ga0068855_100037827 Ga0068855_1000378272 380
168 3300005614 Ga0068856_100078543 Ga0068856_1000785431 380
169 3300005616 Ga0068852_100004400 Ga0068852_1000044001 380
170 3300005834 Ga0068851_10000010 Ga0068851_10000010102 380
171 3300006237 Ga0097621_100000205 Ga0097621_10000020517 380
172 3300006358 Ga0068871_100000162 Ga0068871_10000016236 380
173 3300006881 Ga0068865_100000075 Ga0068865_1000000756 380
174 3300009036 Ga0105244_10017451 Ga0105244_100174511 380
175 3300009093 Ga0105240_10001259 Ga0105240_1000125932 380
176 3300009093 Ga0105240_10015516 Ga0105240_100155163 380
177 3300009093 Ga0105240_10044265 Ga0105240_100442654 380
178 3300009093 Ga0105240_10137892 Ga0105240_101378923 380
179 3300009174 Ga0105241_10000926 Ga0105241_100009263 380
180 3300009174 Ga0105241_10003192 Ga0105241_100031921 380
181 3300009176 Ga0105242_10330986 Ga0105242_103309861 380
182 3300009545 Ga0105237_10001805 Ga0105237_1000180514 380
183 3300009545 Ga0105237_10003033 Ga0105237_1000303312 380
184 3300009545 Ga0105237_10139942 Ga0105237_101399421 380
185 3300009545 Ga0105237_10203937 Ga0105237_102039371 380
186 3300009551 Ga0105238_10000836 Ga0105238_1000083621 380
187 3300009551 Ga0105238_10372148 Ga0105238_103721481 380
188 3300010375 Ga0105239_10000016 Ga0105239_1000001697 380
189 3300010375 Ga0105239_10041274 Ga0105239_100412742 380
190 3300010375 Ga0105239_10096420 Ga0105239_100964204 380
191 3300010375 Ga0105239_10261862 Ga0105239_102618622 380
192 3300013100 Ga0157373_10003775 Ga0157373_1000377513 380
193 3300013100 Ga0157373_10066418 Ga0157373_100664182 380
194 3300013100 Ga0157373_10137364 Ga0157373_101373642 380
195 3300013102 Ga0157371_10000482 Ga0157371_1000048241 380
196 3300013104 Ga0157370_10032329 Ga0157370_100323294 380
197 3300013104 Ga0157370_10100136 Ga0157370_101001361 380
198 3300013104 Ga0157370_10353441 Ga0157370_103534411 380
199 3300013105 Ga0157369_10000285 Ga0157369_1000028550 380
200 3300013105 Ga0157369_10004431 Ga0157369_100044312 380
201 3300013105 Ga0157369_10220300 Ga0157369_102203002 380
202 3300013296 Ga0157374_10000897 Ga0157374_100008976 380
203 3300013297 Ga0157378_10053220 Ga0157378_100532202 380
204 3300013306 Ga0163162_10000041 Ga0163162_1000004111 380
205 3300013306 Ga0163162_10000073 Ga0163162_1000007333 380
206 3300013306 Ga0163162_10004821 Ga0163162_100048214 380
207 3300013306 Ga0163162_10005366 Ga0163162_100053663 380
208 3300013306 Ga0163162_10067822 Ga0163162_100678222 380
209 3300013307 Ga0157372_10000029 Ga0157372_10000029152 380
210 3300013307 Ga0157372_10002401 Ga0157372_100024018 380
211 3300013307 Ga0157372_10024957 Ga0157372_100249571 380
212 3300013307 Ga0157372_10100712 Ga0157372_101007124 380
213 3300013308 Ga0157375_10116766 Ga0157375_101167662 380
214 3300014497 Ga0182008_10001730 Ga0182008_100017305 380
215 3300015261 Ga0182006_1000209 Ga0182006_100020925 380
216 3300015261 Ga0182006_1000386 Ga0182006_100038634 380
217 3300015262 Ga0182007_10000016 Ga0182007_1000001682 380
218 3300015262 Ga0182007_10019252 Ga0182007_100192522 380
219 3300015682 Ga0183373_1011 Ga0183373_101145 380
220 3300017792 Ga0163161_10000844 Ga0163161_100008447 380
221 3300017792 Ga0163161_10004024 Ga0163161_100040249 380
222 3300017792 Ga0163161_10009059 Ga0163161_100090597 380
223 3300017792 Ga0163161_10017468 Ga0163161_100174684 380
224 3300025230 Ga0209563_105900 Ga0209563_1059001 380
225 3300025231 Ga0207427_100109 Ga0207427_10010913 380
226 3300025233 Ga0209437_100096 Ga0209437_100096120 380
227 3300025245 Ga0207425_1000003 Ga0207425_1000003859 380
228 3300025250 Ga0209026_1000243 Ga0209026_100024323 380
229 3300025250 Ga0209026_1006780 Ga0209026_10067803 380
230 3300025258 Ga0209129_1000076 Ga0209129_100007627 380
231 3300025261 Ga0209233_1000029 Ga0209233_1000029496 380
232 3300025294 Ga0209025_1000007 Ga0209025_1000007858 380
233 3300025297 Ga0209758_1000114 Ga0209758_1000114140 380
234 3300025321 Ga0207656_10000029 Ga0207656_100000293 380
235 3300025728 Ga0207655_1018196 Ga0207655_10181965 380
236 3300025904 Ga0207647_10000698 Ga0207647_100006989 380
237 3300025907 Ga0207645_10000014 Ga0207645_1000001445 380
238 3300025909 Ga0207705_10000293 Ga0207705_1000029321 380
239 3300025911 Ga0207654_10194760 Ga0207654_101947601 380
240 3300025913 Ga0207695_10000183 Ga0207695_10000183156 380
241 3300025913 Ga0207695_10007128 Ga0207695_100071284 380
242 3300025913 Ga0207695_10026101 Ga0207695_100261012 380
243 3300025913 Ga0207695_10143063 Ga0207695_101430633 380
244 3300025914 Ga0207671_10000477 Ga0207671_1000047714 380
245 3300025914 Ga0207671_10003421 Ga0207671_100034218 380
246 3300025914 Ga0207671_10069436 Ga0207671_100694362 380
247 3300025919 Ga0207657_10090475 Ga0207657_100904753 380
248 3300025931 Ga0207644_10014918 Ga0207644_100149183 380
249 3300025933 Ga0207706_10000009 Ga0207706_10000009128 380
250 3300025938 Ga0207704_10000976 Ga0207704_100009765 380
251 3300025949 Ga0207667_10020009 Ga0207667_100200092 380
252 3300025960 Ga0207651_10008607 Ga0207651_100086072 380
253 3300026035 Ga0207703_10240611 Ga0207703_102406112 380
254 3300026041 Ga0207639_10017486 Ga0207639_100174861 380
255 3300026041 Ga0207639_10085645 Ga0207639_100856452 380
256 3300026067 Ga0207678_10003062 Ga0207678_1000306211 380
257 3300026078 Ga0207702_10128562 Ga0207702_101285621 380
258 3300026089 Ga0207648_10000963 Ga0207648_1000096314 380
259 3300026121 Ga0207683_10079793 Ga0207683_100797932 380
260 3300028379 Ga0268266_10000177 Ga0268266_1000017769 380
261 3300028786 Ga0307517_10000553 Ga0307517_100005532 380
262 3300028794 Ga0307515_10016025 Ga0307515_100160253 380
263 3300028794 Ga0307515_10029848 Ga0307515_100298485 380
264 3300028800 Ga0265338_10049383 Ga0265338_100493833 380
265 3300030731 Ga0316177_1124612 Ga0316177_11246122 380
266 3300030742 Ga0316183_1106482 Ga0316183_11064823 380
267 3300031548 Ga0307408_100000527 Ga0307408_10000052720 380
268 3300031731 Ga0307405_10000023 Ga0307405_10000023102 380
269 3300031903 Ga0307407_10000016 Ga0307407_10000016110 380
270 3300032002 Ga0307416_100000036 Ga0307416_100000036110 380
271 3300032004 Ga0307414_10014313 Ga0307414_100143131 380
272 3300032004 Ga0307414_10021251 Ga0307414_100212513 380
273 3300033179 Ga0307507_10000143 Ga0307507_1000014388 380
274 3300033180 Ga0307510_10000172 Ga0307510_1000017225 380
275 3300037312 Ga0395899_0000017 Ga0395899_0000017_44059_45201 380
276 3300037312 Ga0395899_0000695 Ga0395899_0000695_1220_2371 380
277 3300037312 Ga0395899_0004169 Ga0395899_0004169_6331_7473 380
278 3300037418 Ga0395900_0000658 Ga0395900_0000658_7106_8248 380
279 3300037418 Ga0395900_0204224 Ga0395900_0204224_465_1616 380
280 3300037471 Ga0395905_0004172 Ga0395905_0004172_11890_13032 380
281 3300038443 Ga0395901_0001153 Ga0395901_0001153_16548_17690 380
282 3300038443 Ga0395901_0281220 Ga0395901_0281220_14_1165 380
283 3300039447 Ga0436361_1159520 Ga0436361_1159520_12000_13142 380
284 3300042005 Ga0439448_0004364 Ga0439448_0004364_989_2131 380
285 3300042876 Ga0451577_0113692 Ga0451577_0113692_766_1932 380
286 3300044684 Ga0466966_0008055 Ga0466966_0008055_649_1800 380
287 3300044712 Ga0453684_0084507 Ga0453684_0084507_1361_2527 380
288 3300045049 Ga0466959_0043774 Ga0466959_0043774_250_1401 380
289 3300046462 Ga0495651_0105302 Ga0495651_0105302_515_1657 380
290 3300046471 Ga0495650_0000081 Ga0495650_0000081_232214_233374 380
291 3300046492 Ga0495585_0006975 Ga0495585_0006975_3701_4843 380
292 3300046501 Ga0495607_0076459 Ga0495607_0076459_459_1619 380
293 3300046507 Ga0495606_0003028 Ga0495606_0003028_16603_17751 380
294 3300046507 Ga0495606_0008540 Ga0495606_0008540_231_1373 380
295 3300046507 Ga0495606_0061018 Ga0495606_0061018_342_1484 380
296 3300046512 Ga0495610_0000098 Ga0495610_0000098_403_1545 380
297 3300046512 Ga0495610_0000119 Ga0495610_0000119_40870_42012 380
298 3300046512 Ga0495610_0008137 Ga0495610_0008137_3156_4298 380
299 3300046513 Ga0495616_0000921 Ga0495616_0000921_19483_20625 380
300 3300046518 Ga0495631_0039718 Ga0495631_0039718_887_2029 380
301 3300046520 Ga0495637_0011602 Ga0495637_0011602_591_1733 380
302 3300046529 Ga0495652_0107244 Ga0495652_0107244_184_1326 380
303 3300046538 Ga0495609_0003122 Ga0495609_0003122_5416_6558 380
304 3300046558 Ga0495633_0000785 Ga0495633_0000785_296_1438 380
305 3300046558 Ga0495633_0029773 Ga0495633_0029773_1112_2254 380
306 3300046616 Ga0495668_0000017 Ga0495668_0000017_201519_202661 380
307 3300046616 Ga0495668_0110865 Ga0495668_0110865_182_1324 380
308 3300046660 Ga0495625_0000049 Ga0495625_0000049_176763_177905 380
309 3300046660 Ga0495625_0000901 Ga0495625_0000901_22844_23986 380
310 3300046660 Ga0495625_0001789 Ga0495625_0001789_5680_6822 380
311 3300046660 Ga0495625_0008913 Ga0495625_0008913_5519_6661 380
312 3300046660 Ga0495625_0109270 Ga0495625_0109270_233_1375 380
313 3300046665 Ga0495661_0000946 Ga0495661_0000946_22479_23621 380
314 3300046665 Ga0495661_0020657 Ga0495661_0020657_3104_4246 380
315 3300046665 Ga0495661_0056893 Ga0495661_0056893_906_2048 380
316 3300046694 Ga0495649_0000014 Ga0495649_0000014_19742_20884 380
317 3300046810 Ga0495660_0001895 Ga0495660_0001895_10482_11624 380
318 3300047323 Ga0495683_0032290 Ga0495683_0032290_68_1210 380
319 3300047443 Ga0495687_000409 Ga0495687_000409_3750_4892 380
320 3300049460 Ga0495682_0004339 Ga0495682_0004339_2301_3443 380
321 3300050493 nmdc:mga0k408_63_c1 nmdc:mga0k408_63_c1_27932_29074 380
322 3300050496 nmdc:mga07m45_159702_c1 nmdc:mga07m45_159702_c1_19_1161 380
323 3300053080 Ga0500635_0001524 Ga0500635_0001524_3869_5011 380
324 3300053122 Ga0500608_002924 Ga0500608_002924_1769_2911 380
325 3300053122 Ga0500608_027020 Ga0500608_027020_1049_2191 380
326 3300053161 Ga0500634_0066212 Ga0500634_0066212_317_1459 380
327 2162886007 SwRhRL2b_contig_1252635 SwRhRL2b_0380.00002420 381
328 3300002737 JGI25162J39368_1000008 JGI25162J39368_1000008126 381
329 3300005288 Ga0065714_10002344 Ga0065714_100023445 381
330 3300005288 Ga0065714_10002764 Ga0065714_1000276411 381
331 3300005288 Ga0065714_10004360 Ga0065714_100043606 381
332 3300005289 Ga0065704_10070225 Ga0065704_1007022511 381
333 3300005289 Ga0065704_10075206 Ga0065704_100752063 381
334 3300005578 Ga0068854_100085595 Ga0068854_1000855952 381
335 3300009545 Ga0105237_10000402 Ga0105237_1000040247 381
336 3300009545 Ga0105237_10013163 Ga0105237_100131631 381
337 3300009545 Ga0105237_10299923 Ga0105237_102999232 381
338 3300010375 Ga0105239_10000285 Ga0105239_1000028518 381
339 3300010375 Ga0105239_10005254 Ga0105239_100052545 381
340 3300013100 Ga0157373_10000325 Ga0157373_100003253 381
341 3300013102 Ga0157371_10006648 Ga0157371_100066483 381
342 3300013102 Ga0157371_10009398 Ga0157371_100093983 381
343 3300013102 Ga0157371_10014019 Ga0157371_100140194 381
344 3300013104 Ga0157370_10000084 Ga0157370_1000008471 381
345 3300013104 Ga0157370_10020538 Ga0157370_100205382 381
346 3300013104 Ga0157370_10025373 Ga0157370_100253734 381
347 3300013104 Ga0157370_10078501 Ga0157370_100785013 381
348 3300013105 Ga0157369_10016184 Ga0157369_100161845 381
349 3300013306 Ga0163162_10073475 Ga0163162_100734753 381
350 3300014497 Ga0182008_10000002 Ga0182008_10000002353 381
351 3300014497 Ga0182008_10000112 Ga0182008_1000011238 381
352 3300014497 Ga0182008_10005120 Ga0182008_100051203 381
353 3300014497 Ga0182008_10017608 Ga0182008_100176083 381
354 3300015261 Ga0182006_1000236 Ga0182006_10002363 381
355 3300015262 Ga0182007_10046113 Ga0182007_100461132 381
356 3300017792 Ga0163161_10003492 Ga0163161_1000349210 381
357 3300017792 Ga0163161_10067312 Ga0163161_100673121 381
358 3300025233 Ga0209437_100030 Ga0209437_100030260 381
359 3300025258 Ga0209129_1011965 Ga0209129_10119652 381
360 3300025913 Ga0207695_10126527 Ga0207695_101265273 381
361 3300025914 Ga0207671_10001285 Ga0207671_1000128511 381
362 3300025914 Ga0207671_10002346 Ga0207671_1000234611 381
363 3300025914 Ga0207671_10003820 Ga0207671_100038205 381
364 3300025981 Ga0207640_10006335 Ga0207640_100063353 381
365 3300031911 Ga0307412_10000085 Ga0307412_1000008573 381
366 3300032004 Ga0307414_10000510 Ga0307414_1000051022 381
367 3300032004 Ga0307414_10001132 Ga0307414_100011322 381
368 3300032004 Ga0307414_10010285 Ga0307414_100102853 381
369 3300046529 Ga0495652_0135774 Ga0495652_0135774_695_1867 381
370 3300046660 Ga0495625_0002512 Ga0495625_0002512_9906_11060 381
371 3300047443 Ga0495687_037868 Ga0495687_037868_631_1785 381
372 3300048925 Ga0496122_0000837 Ga0496122_0000837_8750_9895 381
373 3300048926 Ga0496123_0009274 Ga0496123_0009274_6786_7931 381
374 3300053093 Ga0500651_0000589 Ga0500651_0000589_1333_2478 381
375 iso_pu_bacteria 2852627209 2852628931 381

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00534

Glycos_transf_1

Glycosyl transferases group 1

205

372

0.96

PF13439

Glyco_transf_4

Glycosyltransferase Family 4

32

201

0.96

PF13692

Glyco_trans_1_4

Glycosyl transferases group 1

219

358

0.94

PF13579

Glyco_trans_4_4

Glycosyl transferase 4-like domain

33

195

0.85

PF20706

GT4-conflict

Family 4 Glycosyltransferase in conflict systems

165

362

0.8

PF13477

Glyco_trans_4_2

Glycosyl transferase 4-like

27

173

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2jjm-assembly1.cif.gz_B crystal structure of a family gt4 glycosyltransferase from bacillus anthracis orf ba1558. 0.9575 2 371
3mbo-assembly3.cif.gz_E crystal structure of the glycosyltransferase babsha bound with udp and l-malate 0.9558 2 371
3mbo-assembly1.cif.gz_A crystal structure of the glycosyltransferase babsha bound with udp and l-malate 0.9547 2 372
3mbo-assembly4.cif.gz_H crystal structure of the glycosyltransferase babsha bound with udp and l-malate 0.9542 1 372
3mbo-assembly2.cif.gz_C crystal structure of the glycosyltransferase babsha bound with udp and l-malate 0.9531 2 371
ID Description Score Start End Superfamily
af_Q2G0L3_321_481_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.971 203 360 3.40.50.2000
af_Q2G0L2_318_480_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9592 196 355 3.40.50.2000
4x6lA03 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9565 198 354 3.40.50.2000
5d00A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9516 184 354 3.40.50.2000
af_Q2G0L3_321_481_3.40.50.2000 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Glycogen Phosphorylase B; 0.9476 203 360 3.40.50.2000
ID Description Score Start End GO Terms
AF-A0A3C2AM11-F1-model_v4 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 0.986 145 376 GO:0016757
GO:0071793
AF-A0A3C2AM11-F1-model_v4 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 0.9777 145 376 GO:0016757
GO:0071793
AF-A0A2S7SSF2-F1-model_v4 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 0.9657 1 376 GO:0016757
GO:0071793
AF-A0A2S7SSF2-F1-model_v4 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 0.9582 1 376 GO:0016757
GO:0071793
AF-A0A538QZJ5-F1-model_v4 Glycosyltransferase 0.9535 196 353 GO:0016758

Feature Viewer

pLDDT pTM Quality
87.22 0.85 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar

Map