F427010

General Info

Members Datasets Scaffolds Average Seq Length
375 246 336 274

Family's Representative Sequence

Representative Sequence 3300009093|Ga0105240_10062887|Ga0105240_100628873
Length 292
Sequence VKNPEHQSKIEVWTGRRATIAHLSVKGITVTFIEKLNAAWTSRNSLLCVGLDPDLKKFPAELQGKPDAIFEFCRAIIDATAEAACAFKPQIAYFAALGAEEQLERICAYLRTNYPEIPLVLDAKRGDIGATAEQYAREAFERYDADVVTVSPYMGWDDRGVIVLCRTSNAGGSDLQFLEVDGKPLYQHVARLVAEKWNTNGQCGLVVGATFPHELAQVRAIIGDMPLLVPGVGAQGGDVQATVTSGKTASGTGMMINSSRAILYAKPEAGEDFAAAARRVAIQTRDEINRFR

Samples

Sample ID Description Type Environment
1 2511231003 Herbaspirillum sp. CF444 Isolate Rhizosphere
2 2511231026 Herbaspirillum sp. YR522 Isolate Rhizosphere
3 2521172590 Herbaspirillum sp. GW103 Isolate Rhizosphere
4 2551306416 Herbaspirillum seropedicae Os34 Isolate Unclassified
5 2596583598 Ralstonia sp. UNCCL144 Isolate Unclassified
6 2599185178 Ralstonia sp. NFACC01 Isolate Rhizoplane
7 2643221645 Massilia sp. Root351 Isolate Unclassified
8 2643221664 Massilia sp. Root418 Isolate Unclassified
9 2738541280 Massilia sp. GV090 Isolate Unclassified
10 2738541300 Massilia sp. GV016 Isolate Unclassified
11 2738543018 Massilia sp. GV045 Isolate Unclassified
12 2738543030 Massilia sp. GV097 Isolate Unclassified
13 2765235838 Herbaspirillum robiniae AA6 Isolate Unclassified
14 2808606386 Herbaspirillum sp. SJZ099 Isolate Rhizosphere
15 2808606415 Herbaspirillum sp. SJZ130 Isolate Rhizosphere
16 2808606419 Herbaspirillum sp. SJZ106 Isolate Rhizosphere
17 2818991436 Collimonas arenae 515 Isolate Unclassified
18 2818991445 Herbaspirillum hiltneri 3195 Isolate Unclassified
19 2818991449 Herbaspirillum huttiense 1147 Isolate Unclassified
20 2839094727 Herbaspirillum robiniae HZ10 Isolate Nodule
21 2852618963 Herbaspirillum sp. SJZ102 Isolate Rhizosphere
22 2857558681 Duganella sp. R-74565 Isolate Unclassified
23 2884811622 Herbaspirillum sp. 3C11 Isolate Unclassified
24 2884836552 Herbaspirillum sp. 3R-11 Isolate Unclassified
25 2884852848 Herbaspirillum sp. 3R11 Isolate Unclassified
26 2885266251 Ralstonia sp. SET104 Isolate Nodule
27 2896154374 Herbaspirillum sp. 3R-3a1 Isolate Nodule
28 2900577576 Ralstonia sp. TCR112 Isolate Rhizosphere
29 2904424332 Duganella sp. 1411 Isolate Rhizosphere
30 2904439833 Herbaspirillum sp. 1589 Isolate Rhizosphere
31 2904530477 Herbaspirillum huttiense 611 Isolate Unclassified
32 2904584206 Herbaspirillum sp. 1050 Isolate Unclassified
33 2904589729 Herbaspirillum sp. 1130 Isolate Unclassified
34 2904601388 Herbaspirillum sp. 1273 Isolate Rhizosphere
35 2919046199 Herbaspirillum frisingense 596 Isolate Unclassified
36 2919079590 Herbaspirillum sp. 1173 Isolate Unclassified
37 2923510766 Herbaspirillum rubrisubalbicans SLBN-127 Isolate Rhizosphere
38 2928058823 Ralstonia sp. 1138 Isolate Unclassified
39 2928130867 Herbaspirillum seropedicae 1977 Isolate Unclassified
40 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
41 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
42 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
43 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
44 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
45 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
46 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
47 3300002771 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mLB Metagenome Endosphere
48 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
49 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
50 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
51 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
52 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
53 3300003751 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 Metagenome Endosphere
54 3300003752 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 Metagenome Endosphere
55 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
56 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
57 3300003759 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 Metagenome Endosphere
58 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
59 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
60 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
61 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
62 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
63 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
64 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
65 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
66 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
67 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
68 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
69 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
70 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
71 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
72 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
73 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
74 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
75 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
76 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
77 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
78 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
79 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
80 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
81 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
82 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
83 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
84 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
85 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
86 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
87 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
88 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
89 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
90 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
91 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
92 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
93 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
94 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
95 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
96 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
97 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
98 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
99 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
100 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
101 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
102 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
103 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
104 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
105 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
106 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
107 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
108 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
109 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
110 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
111 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
112 3300025224 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
113 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
114 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
116 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
117 3300025230 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
119 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
120 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
121 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
122 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
123 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
125 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
126 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
127 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
128 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
129 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
144 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
145 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
146 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
147 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
148 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
149 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
150 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
151 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
152 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
153 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
154 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
155 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
156 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
157 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
158 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
159 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
160 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
161 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
162 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
163 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
164 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
165 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
166 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
167 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
168 3300042530 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0530L_E14_082316_2047 Metagenome Rhizosphere
169 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
170 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
171 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
172 3300044671 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA1E Metagenome Unclassified
173 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
174 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
175 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
176 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
177 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
178 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
179 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
180 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
181 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
182 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
183 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
184 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
185 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
186 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
187 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
188 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
189 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
190 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
191 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
192 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
193 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
194 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
195 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
196 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
197 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
198 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
199 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
200 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
201 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
202 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
203 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
204 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
205 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
206 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
207 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
208 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
209 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
210 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
211 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
212 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
213 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
214 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
215 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
216 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
217 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
218 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
219 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
220 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
221 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
222 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
223 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
224 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
225 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
226 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
227 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
228 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
229 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
230 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
231 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
232 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
233 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
234 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
235 3300049766 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_B_4_drought Metagenome Rhizosphere
236 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
237 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
238 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
239 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
240 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
241 3300053145 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 endosphere Metagenome Endosphere
242 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
243 3300059508 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 53R_CD_T2_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
244 3300059643 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 13R_AD_T1_R1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
245 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
246 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.2
Metatranscriptomes 2.4
Isolates 10.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 19.2
Nodule 1.07
Rhizoplane 1.87
Rhizosphere 60.53
Stem 0
Stem Tuber 0
Unclassified 17.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24741J21665_1000067 3300001915 Bacteria 25565
2 JGI24740J21852_10000217 3300001979 Bacteria 24237
3 JGI24740J21852_10000413 3300001979 Bacteria 18281
4 JGI25155J39150_1000396 3300002704 Bacteria 12200
5 JGI25156J39149_1001044 3300002705 Bacteria 12868
6 JGI25156J39149_1004209 3300002705 Bacteria 4439
7 JGI25156J39149_1006578 3300002705 Bacteria 3155
8 JGI25156J39149_1007987 3300002705 Bacteria 2713
9 JGI25162J39368_1000025 3300002737 Bacteria 228879
10 JGI25162J39368_1000263 3300002737 Bacteria 50433
11 JGI25154J39366_1000561 3300002738 Bacteria 18252
12 JGI25154J39366_1000878 3300002738 Bacteria 12876
13 JGI25154J39366_1000945 3300002738 Bacteria 12054
14 JGI25157J39369_1000094 3300002741 Bacteria 76378
15 JGI25163J39215_1003291 3300002771 Bacteria 1344
16 JGI25151J46595_10015385 3300003187 Bacteria 3373
17 JGI25165J46597_1000054 3300003214 Bacteria 228891
18 rootH2_10221408 3300003320 Unclassified 4126
19 rootL2_10117266 3300003322 Bacteria 3833
20 rootH1_10317883 3300003323 Bacteria 2263
21 Ga0055538_1000026 3300003751 Bacteria 228891
22 Ga0055538_1000070 3300003751 Bacteria 93518
23 Ga0055539_1000033 3300003752 Bacteria 228891
24 Ga0055539_1000105 3300003752 Bacteria 93518
25 Ga0055539_1000148 3300003752 Bacteria 70566
26 Ga0055533_1000044 3300003756 Bacteria 228891
27 Ga0055533_1000113 3300003756 Bacteria 93518
28 Ga0055533_1002525 3300003756 Bacteria 4114
29 Ga0055532_1000017 3300003758 Bacteria 306880
30 Ga0055532_1000072 3300003758 Bacteria 131787
31 Ga0055525_1000052 3300003759 Bacteria 228891
32 Ga0055525_1000153 3300003759 Bacteria 93518
33 Ga0055525_1000463 3300003759 Bacteria 22787
34 Ga0055527_1000480 3300003760 Bacteria 14713
35 Ga0055535_1000053 3300003761 Bacteria 131787
36 Ga0055542_1001312 3300003762 Bacteria 13172
37 Ga0055529_1000099 3300003763 Bacteria 131775
38 Ga0055526_1000042 3300003771 Bacteria 124886
39 Ga0055526_1000125 3300003771 Bacteria 67941
40 Ga0055531_10000247 3300003794 Bacteria 58229
41 Ga0055541_1000069 3300003841 Bacteria 94648
42 Ga0055541_1000071 3300003841 Bacteria 93518
43 Ga0055541_1000362 3300003841 Bacteria 14081
44 Ga0055541_1007026 3300003841 Bacteria 1874
45 Ga0055543_1000681 3300004625 Bacteria 17726
46 Ga0065704_10225084 3300005289 Bacteria 1061
47 Ga0070670_100098566 3300005331 Bacteria 2515
48 Ga0070682_100154272 3300005337 Bacteria 1579
49 Ga0070682_100163103 3300005337 Bacteria 1541
50 Ga0070682_100226468 3300005337 Bacteria 1334
51 Ga0070660_100000550 3300005339 Bacteria 25105
52 Ga0070661_100000322 3300005344 Bacteria 38464
53 Ga0070668_100150555 3300005347 Bacteria 1881
54 Ga0070659_100001218 3300005366 Bacteria 18683
55 Ga0070659_100002419 3300005366 Bacteria 13269
56 Ga0070701_10281876 3300005438 Bacteria 1015
57 Ga0070663_100000016 3300005455 Bacteria 126268
58 Ga0068855_100000791 3300005563 Bacteria 39102
59 Ga0068855_100293592 3300005563 Bacteria 1802
60 Ga0068855_100303212 3300005563 Bacteria 1769
61 Ga0070664_100000017 3300005564 Bacteria 125713
62 Ga0070664_100032939 3300005564 Bacteria 4336
63 Ga0068857_100001690 3300005577 Bacteria 17737
64 Ga0068854_100000078 3300005578 Bacteria 69419
65 Ga0068854_100041665 3300005578 Bacteria 3245
66 Ga0068856_100001143 3300005614 Bacteria 27880
67 Ga0068852_100028089 3300005616 Bacteria 4598
68 Ga0068852_100104762 3300005616 Bacteria 2561
69 Ga0068862_100061482 3300005844 Bacteria 3229
70 Ga0075370_10059573 3300006353 Bacteria 2173
71 Ga0079104_1007033 3300006946 Bacteria 4143
72 Ga0105251_10034610 3300009011 Bacteria 2498
73 Ga0105240_10001581 3300009093 Bacteria 38647
74 Ga0105240_10062887 3300009093 Bacteria 4619
75 Ga0105240_10200244 3300009093 Bacteria 2340
76 Ga0105237_10061993 3300009545 Bacteria 3738
77 Ga0105238_10000632 3300009551 Bacteria 37034
78 Ga0105238_10140644 3300009551 Bacteria 2390
79 Ga0105249_10341624 3300009553 Bacteria 1514
80 Ga0105249_10990080 3300009553 Bacteria 909
81 Ga0105239_10013144 3300010375 Bacteria 9200
82 Ga0157373_10249651 3300013100 Bacteria 1255
83 Ga0157371_10000475 3300013102 Bacteria 49125
84 Ga0157370_10000488 3300013104 Bacteria 49320
85 Ga0157369_10043541 3300013105 Bacteria 4892
86 Ga0157372_10001403 3300013307 Bacteria 25976
87 Ga0163163_10190586 3300014325 Bacteria 2099
88 Ga0157380_10142746 3300014326 Bacteria 2059
89 Ga0182008_10044249 3300014497 Bacteria 2214
90 Ga0157376_10051148 3300014969 Bacteria 3432
91 Ga0182006_1001152 3300015261 Bacteria 16697
92 Ga0182006_1006942 3300015261 Bacteria 5212
93 Ga0182006_1017217 3300015261 Bacteria 3073
94 Ga0182006_1027971 3300015261 Bacteria 2297
95 Ga0182007_10008649 3300015262 Bacteria 4166
96 Ga0182007_10010689 3300015262 Bacteria 3613
97 Ga0182005_1002091 3300015265 Bacteria 7439
98 Ga0163161_10030851 3300017792 Bacteria 3817
99 Ga0206356_11424634 3300020070 Bacteria 1996
100 Ga0206349_1457021 3300020075 Bacteria 1569
101 Ga0206355_1189558 3300020076 Bacteria 1812
102 Ga0206351_10090128 3300020077 Bacteria 10563
103 Ga0206350_10303671 3300020080 Bacteria 2521
104 Ga0154015_1471839 3300020610 Bacteria 7935
105 Ga0213872_10000191 3300021361 Bacteria 54643
106 Ga0213872_10002201 3300021361 Bacteria 11689
107 Ga0213872_10138528 3300021361 Bacteria 1069
108 Ga0224712_10016653 3300022467 Bacteria 2420
109 Ga0209435_100015 3300025206 Bacteria 321177
110 Ga0209435_100112 3300025206 Bacteria 31239
111 Ga0209784_100009 3300025224 Bacteria 688031
112 Ga0209784_100020 3300025224 Bacteria 412353
113 Ga0209784_100063 3300025224 Bacteria 159576
114 Ga0209784_100449 3300025224 Bacteria 17532
115 Ga0209566_100007 3300025225 Bacteria 688031
116 Ga0209566_100020 3300025225 Bacteria 412353
117 Ga0209566_100048 3300025225 Bacteria 241570
118 Ga0209566_100238 3300025225 Bacteria 52918
119 Ga0209566_100376 3300025225 Bacteria 36803
120 Ga0209674_100018 3300025226 Bacteria 688031
121 Ga0209674_100035 3300025226 Bacteria 412353
122 Ga0209674_100071 3300025226 Bacteria 241568
123 Ga0209674_100151 3300025226 Bacteria 95725
124 Ga0209674_100218 3300025226 Bacteria 55386
125 Ga0209672_100193 3300025228 Bacteria 49311
126 Ga0209147_100002 3300025229 Bacteria 2158988
127 Ga0209147_100004 3300025229 Bacteria 1371850
128 Ga0209563_100020 3300025230 Bacteria 688031
129 Ga0209563_100038 3300025230 Bacteria 412353
130 Ga0209563_100085 3300025230 Bacteria 186579
131 Ga0209563_103194 3300025230 Bacteria 3453
132 Ga0207427_102519 3300025231 Bacteria 4842
133 Ga0209437_100045 3300025233 Bacteria 429809
134 Ga0209437_100066 3300025233 Bacteria 327883
135 Ga0209258_100002 3300025242 Bacteria 2158988
136 Ga0209258_100304 3300025242 Bacteria 79331
137 Ga0209646_1000020 3300025246 Bacteria 462204
138 Ga0209646_1000040 3300025246 Bacteria 347867
139 Ga0209646_1000123 3300025246 Bacteria 142437
140 Ga0209026_1000034 3300025250 Bacteria 306953
141 Ga0209026_1002489 3300025250 Bacteria 6851
142 Ga0209026_1010150 3300025250 Bacteria 1780
143 Ga0209026_1012761 3300025250 Bacteria 1453
144 Ga0209677_100010 3300025253 Bacteria 688031
145 Ga0209677_100031 3300025253 Bacteria 329719
146 Ga0209677_100040 3300025253 Bacteria 241568
147 Ga0209677_104259 3300025253 Bacteria 4215
148 Ga0209148_1000077 3300025254 Bacteria 298133
149 Ga0209759_1000049 3300025256 Bacteria 221692
150 Ga0209759_1000073 3300025256 Bacteria 178048
151 Ga0209759_1003849 3300025256 Bacteria 5815
152 Ga0209759_1011204 3300025256 Bacteria 2566
153 Ga0209233_1000060 3300025261 Bacteria 412379
154 Ga0209455_1000149 3300025272 Bacteria 131876
155 Ga0209564_1000032 3300025295 Bacteria 464041
156 Ga0209564_1000464 3300025295 Bacteria 67994
157 Ga0207655_1008162 3300025728 Bacteria 6689
158 Ga0207695_10000891 3300025913 Bacteria 54140
159 Ga0207695_10009565 3300025913 Bacteria 11978
160 Ga0207695_10010074 3300025913 Bacteria 11606
161 Ga0207695_10143654 3300025913 Bacteria 2332
162 Ga0207671_10008064 3300025914 Bacteria 8998
163 Ga0207649_10000051 3300025920 Bacteria 108386
164 Ga0207649_10028377 3300025920 Bacteria 3294
165 Ga0207694_10000171 3300025924 Bacteria 66876
166 Ga0207694_10054971 3300025924 Bacteria 3090
167 Ga0207690_10001813 3300025932 Bacteria 13109
168 Ga0207690_10074267 3300025932 Bacteria 2355
169 Ga0207679_10000042 3300025945 Bacteria 126099
170 Ga0207679_10001631 3300025945 Bacteria 13986
171 Ga0207679_10197985 3300025945 Bacteria 1676
172 Ga0207667_10000191 3300025949 Bacteria 89641
173 Ga0207667_10013369 3300025949 Bacteria 9393
174 Ga0207667_10041727 3300025949 Bacteria 4879
175 Ga0207712_10150977 3300025961 Bacteria 1794
176 Ga0207668_10155617 3300025972 Bacteria 1775
177 Ga0207640_10000165 3300025981 Bacteria 48028
178 Ga0207678_10000418 3300026067 Bacteria 38457
179 Ga0207702_10000156 3300026078 Bacteria 80626
180 Ga0207674_10002727 3300026116 Bacteria 22030
181 Ga0207674_10138246 3300026116 Bacteria 2397
182 Ga0207675_100087441 3300026118 Bacteria 2927
183 Ga0207698_10010015 3300026142 Bacteria 6069
184 Ga0265323_10005151 3300028653 Bacteria 5568
185 Ga0307511_10001169 3300030521 Bacteria 27946
186 Ga0265325_10035120 3300031241 Bacteria 2664
187 Ga0265327_10013471 3300031251 Bacteria 5429
188 Ga0265316_10297751 3300031344 Bacteria 1175
189 Ga0265314_10015921 3300031711 Bacteria 5953
190 Ga0265342_10085051 3300031712 Bacteria 1821
191 Ga0307411_10334723 3300032005 Bacteria 1228
192 Ga0307507_10055196 3300033179 Bacteria 3769
193 Ga0373959_0002364 3300034820 Bacteria 3002
194 Ga0373940_0033628 3300035088 Bacteria 1379
195 Ga0316574_0023267 3300035398 Bacteria 3699
196 Ga0316574_0053511 3300035398 Bacteria 2520
197 Ga0373937_0233820 3300036401 Bacteria 1731
198 Ga0395899_0002403 3300037312 Bacteria 15207
199 Ga0395899_0002598 3300037312 Bacteria 14554
200 Ga0395899_0077983 3300037312 Bacteria 2415
201 Ga0395900_0026742 3300037418 Bacteria 5906
202 Ga0395900_0172856 3300037418 Bacteria 2198
203 Ga0395900_0185101 3300037418 Bacteria 2114
204 Ga0395900_0303507 3300037418 Bacteria 1582
205 Ga0395905_0001697 3300037471 Bacteria 25955
206 Ga0395905_0001953 3300037471 Bacteria 23590
207 Ga0395905_0063933 3300037471 Bacteria 3443
208 Ga0395901_0079060 3300038443 Bacteria 3434
209 Ga0395901_0141189 3300038443 Bacteria 2531
210 Ga0395901_0264006 3300038443 Bacteria 1791
211 Ga0400489_15158 3300039093 Viruses 1655
212 Ga0436361_0122858 3300039447 Bacteria 20982
213 Ga0436361_0496436 3300039447 Bacteria 2303
214 Ga0436361_0788745 3300039447 Bacteria 34906
215 Ga0451791_1289911 3300041451 Bacteria 1321
216 Ga0451795_0272015 3300041456 Bacteria 1587
217 Ga0451795_1151766 3300041456 Bacteria 917
218 Ga0451837_0862704 3300041494 Bacteria 1553
219 Ga0451853_2595379 3300041512 Bacteria 2016
220 Ga0450916_004178 3300042530 Bacteria 1619
221 Ga0451577_0000427 3300042876 Bacteria 75491
222 Ga0451577_0007019 3300042876 Bacteria 11110
223 Ga0451577_0026607 3300042876 Bacteria 5238
224 Ga0451577_0078549 3300042876 Bacteria 2942
225 Ga0451577_0205382 3300042876 Bacteria 1779
226 Ga0451577_0263626 3300042876 Bacteria 1560
227 Ga0451577_0405865 3300042876 Bacteria 1237
228 Ga0466969_0036081 3300044656 Bacteria 2499
229 Ga0466972_0059382 3300044658 Bacteria 1836
230 Ga0466978_0013215 3300044671 Bacteria 4649
231 Ga0466966_0009690 3300044684 Bacteria 6381
232 Ga0466961_0000735 3300044693 Bacteria 20551
233 Ga0466964_0026630 3300044706 Bacteria 2264
234 Ga0453684_0001477 3300044712 Bacteria 66338
235 Ga0453684_0011791 3300044712 Bacteria 14568
236 Ga0453684_0379904 3300044712 Bacteria 1586
237 Ga0466968_0066882 3300044735 Bacteria 1557
238 Ga0466968_0181642 3300044735 Bacteria 978
239 Ga0466970_0010602 3300044765 Bacteria 4680
240 Ga0466959_0021991 3300045049 Bacteria 4710
241 Ga0451576_0000621 3300045051 Bacteria 74139
242 Ga0451576_0033074 3300045051 Bacteria 5498
243 Ga0495617_010079 3300046452 Bacteria 3239
244 Ga0495592_0199038 3300046454 Bacteria 1353
245 Ga0495651_0005592 3300046462 Bacteria 9580
246 Ga0495651_0210246 3300046462 Bacteria 1354
247 Ga0495653_0043296 3300046463 Bacteria 3501
248 Ga0495607_0000329 3300046501 Bacteria 49139
249 Ga0495606_0000251 3300046507 Bacteria 94515
250 Ga0495606_0000757 3300046507 Bacteria 49718
251 Ga0495606_0001963 3300046507 Bacteria 25360
252 Ga0495606_0003242 3300046507 Bacteria 17470
253 Ga0495606_0017381 3300046507 Bacteria 5438
254 Ga0495608_0125514 3300046511 Bacteria 1644
255 Ga0495610_0000943 3300046512 Bacteria 26966
256 Ga0495610_0003067 3300046512 Bacteria 13344
257 Ga0495610_0010903 3300046512 Bacteria 5608
258 Ga0495610_0015241 3300046512 Bacteria 4475
259 Ga0495618_0049307 3300046514 Bacteria 2659
260 Ga0495628_0001431 3300046516 Bacteria 21894
261 Ga0495628_0010695 3300046516 Bacteria 7770
262 Ga0495637_0002740 3300046520 Bacteria 9596
263 Ga0495643_0000119 3300046522 Bacteria 127740
264 Ga0495643_0000153 3300046522 Bacteria 112514
265 Ga0495643_0006248 3300046522 Bacteria 7894
266 Ga0495652_0019736 3300046529 Bacteria 5996
267 Ga0495652_0032785 3300046529 Bacteria 4540
268 Ga0495652_0050931 3300046529 Bacteria 3538
269 Ga0495609_0049921 3300046538 Bacteria 1866
270 Ga0495621_0002595 3300046539 Bacteria 4878
271 Ga0495597_0000043 3300046542 Bacteria 106919
272 Ga0495597_0000810 3300046542 Bacteria 24703
273 Ga0495597_0061361 3300046542 Bacteria 1638
274 Ga0495645_0023902 3300046543 Bacteria 4431
275 Ga0495645_0154628 3300046543 Bacteria 1590
276 Ga0495633_0004198 3300046558 Bacteria 9239
277 Ga0495668_0000110 3300046616 Bacteria 132291
278 Ga0495625_0005650 3300046660 Bacteria 11333
279 Ga0495625_0015874 3300046660 Bacteria 5945
280 Ga0495625_0067483 3300046660 Bacteria 2517
281 Ga0495635_0185623 3300046663 Bacteria 1413
282 Ga0495623_0145565 3300046679 Bacteria 1405
283 Ga0495646_0014719 3300046680 Bacteria 4972
284 Ga0495646_0043295 3300046680 Bacteria 2758
285 Ga0495649_0010957 3300046694 Bacteria 5340
286 Ga0495600_0030397 3300046809 Bacteria 3498
287 Ga0495660_0000791 3300046810 Bacteria 23702
288 Ga0495660_0003225 3300046810 Bacteria 10135
289 Ga0495672_0000113 3300047320 Bacteria 129189
290 Ga0495687_000795 3300047443 Bacteria 33965
291 Ga0495687_000990 3300047443 Bacteria 28515
292 Ga0495687_014669 3300047443 Bacteria 4018
293 Ga0495677_0017197 3300047445 Bacteria 2622
294 Ga0495673_0000096 3300047469 Bacteria 182792
295 Ga0495686_0047654 3300047472 Bacteria 2705
296 Ga0495602_0009159 3300048088 Bacteria 10305
297 Ga0495615_0002441 3300048090 Bacteria 2983
298 Ga0495626_0096623 3300048091 Bacteria 1293
299 Ga0496103_0012767 3300048906 Bacteria 4982
300 Ga0496111_0051181 3300048914 Bacteria 2982
301 Ga0496114_0063819 3300048917 Bacteria 3084
302 Ga0496116_0023635 3300048919 Bacteria 4572
303 Ga0496121_0029725 3300048924 Bacteria 5041
304 Ga0496121_0107679 3300048924 Bacteria 2134
305 Ga0496122_0001512 3300048925 Bacteria 37063
306 Ga0496123_0001219 3300048926 Bacteria 37517
307 Ga0496124_0070419 3300048927 Bacteria 2901
308 Ga0496124_0161924 3300048927 Bacteria 1743
309 Ga0496124_0371146 3300048927 Bacteria 1004
310 Ga0496125_0000545 3300048928 Bacteria 64939
311 Ga0496125_0006911 3300048928 Bacteria 12147
312 Ga0496125_0012635 3300048928 Bacteria 8360
313 Ga0495678_000111 3300049459 Bacteria 97182
314 Ga0501031_0099972 3300049568 Bacteria 1893
315 Ga0501032_0203154 3300049569 Bacteria 1293
316 Ga0501036_0052662 3300049572 Bacteria 3447
317 Ga0501038_0234176 3300049574 Bacteria 1460
318 Ga0501040_0110426 3300049576 Bacteria 1923
319 Ga0501042_0036265 3300049578 Bacteria 3498
320 Ga0501046_0375522 3300049580 Bacteria 1030
321 Ga0501048_0032988 3300049582 Bacteria 3742
322 Ga0501072_0046612 3300049588 Bacteria 3412
323 Ga0501249_020568 3300049679 Bacteria 1435
324 Ga0501269_000414 3300049766 Bacteria 9745
325 Ga0501045_0188167 3300049824 Bacteria 1538
326 nmdc:mga03683_4118_c1 3300050489 Bacteria 4781
327 Ga0500583_0006184 3300053092 Bacteria 4093
328 Ga0500618_001346 3300053125 Bacteria 11215
329 Ga0500618_001847 3300053125 Bacteria 8856
330 Ga0500655_006162 3300053133 Bacteria 2161
331 Ga0500586_000417 3300053145 Bacteria 8531
332 Ga0501084_0190610 3300054114 Bacteria 1730
333 Ga0587088_001793 3300059508 Bacteria 2308
334 Ga0587072_001578 3300059643 Bacteria 2862
335 Ga0501082_0165793 3300060353 Bacteria 1920
336 Ga0466962_0036859 3300061719 Bacteria 2341

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300049588 Ga0501072_0046612 Ga0501072_0046612_2664_3392 237
2 3300035088 Ga0373940_0033628 Ga0373940_0033628_604_1356 246
3 3300046507 Ga0495606_0000251 Ga0495606_0000251_60030_60776 246
4 3300046512 Ga0495610_0000943 Ga0495610_0000943_8154_8900 246
5 3300046616 Ga0495668_0000110 Ga0495668_0000110_66988_67734 246
6 3300047472 Ga0495686_0047654 Ga0495686_0047654_1775_2521 246
7 3300048927 Ga0496124_0070419 Ga0496124_0070419_416_1162 246
8 3300048927 Ga0496124_0371146 Ga0496124_0371146_32_778 246
9 3300005438 Ga0070701_10281876 Ga0070701_102818762 253
10 3300026118 Ga0207675_100087441 Ga0207675_1000874412 253
11 3300048924 Ga0496121_0107679 Ga0496121_0107679_1024_1791 253
12 3300049569 Ga0501032_0203154 Ga0501032_0203154_504_1280 253
13 3300046542 Ga0495597_0061361 Ga0495597_0061361_488_1261 254
14 3300047443 Ga0495687_014669 Ga0495687_014669_2734_3507 254
15 3300005347 Ga0070668_100150555 Ga0070668_1001505552 255
16 3300005844 Ga0068862_100061482 Ga0068862_1000614822 255
17 3300009553 Ga0105249_10341624 Ga0105249_103416242 255
18 3300025972 Ga0207668_10155617 Ga0207668_101556172 255
19 3300046501 Ga0495607_0000329 Ga0495607_0000329_26902_27717 259
20 3300048091 Ga0495626_0096623 Ga0495626_0096623_129_944 259
21 3300003320 rootH2_10221408 rootH2_102214083 261
22 3300003322 rootL2_10117266 rootL2_101172663 261
23 3300003323 rootH1_10317883 rootH1_103178833 261
24 3300003751 Ga0055538_1000070 Ga0055538_100007070 261
25 3300003752 Ga0055539_1000105 Ga0055539_100010570 261
26 3300003756 Ga0055533_1000113 Ga0055533_100011370 261
27 3300003759 Ga0055525_1000153 Ga0055525_100015370 261
28 3300003841 Ga0055541_1000071 Ga0055541_100007170 261
29 3300005563 Ga0068855_100000791 Ga0068855_10000079129 261
30 3300005563 Ga0068855_100303212 Ga0068855_1003032122 261
31 3300005578 Ga0068854_100041665 Ga0068854_1000416651 261
32 3300021361 Ga0213872_10002201 Ga0213872_100022012 261
33 3300025224 Ga0209784_100009 Ga0209784_1000099 261
34 3300025225 Ga0209566_100007 Ga0209566_1000079 261
35 3300025226 Ga0209674_100018 Ga0209674_1000189 261
36 3300025230 Ga0209563_100020 Ga0209563_1000209 261
37 3300025253 Ga0209677_100010 Ga0209677_1000109 261
38 3300025913 Ga0207695_10010074 Ga0207695_100100744 261
39 3300025914 Ga0207671_10008064 Ga0207671_100080645 261
40 3300025924 Ga0207694_10000171 Ga0207694_1000017127 261
41 3300025949 Ga0207667_10000191 Ga0207667_1000019128 261
42 3300025949 Ga0207667_10041727 Ga0207667_100417275 261
43 3300026116 Ga0207674_10138246 Ga0207674_101382462 261
44 3300039447 Ga0436361_0122858 Ga0436361_0122858_3682_4500 261
45 3300017792 Ga0163161_10030851 Ga0163161_100308513 262
46 3300003794 Ga0055531_10000247 Ga0055531_1000024726 263
47 3300006353 Ga0075370_10059573 Ga0075370_100595732 263
48 3300034820 Ga0373959_0002364 Ga0373959_0002364_1635_2438 263
49 3300042530 Ga0450916_004178 Ga0450916_004178_230_1045 266
50 iso_pu_bacteria 2521172590 2521559324 266
51 iso_pu_bacteria 2551306416 2553007766 266
52 iso_pu_bacteria 2765235838 2765570583 266
53 iso_pu_bacteria 2808606386 2808983460 266
54 iso_pu_bacteria 2808606415 2809128687 266
55 iso_pu_bacteria 2808606419 2809148308 266
56 iso_pu_bacteria 2818991445 2819592100 266
57 iso_pu_bacteria 2818991449 2819615840 266
58 iso_pu_bacteria 2839094727 2839098082 266
59 iso_pu_bacteria 2852618963 2852620270 266
60 iso_pu_bacteria 2884811622 2884814683 266
61 iso_pu_bacteria 2884836552 2884840481 266
62 iso_pu_bacteria 2884852848 2884855738 266
63 iso_pu_bacteria 2896154374 2896157337 266
64 iso_pu_bacteria 2904439833 2904443732 266
65 iso_pu_bacteria 2904530477 2904532633 266
66 iso_pu_bacteria 2904584206 2904585127 266
67 iso_pu_bacteria 2904589729 2904593476 266
68 iso_pu_bacteria 2904601388 2904605656 266
69 iso_pu_bacteria 2919046199 2919048058 266
70 iso_pu_bacteria 2919079590 2919081452 266
71 iso_pu_bacteria 2923510766 2923513001 266
72 iso_pu_bacteria 2928130867 2928133833 266
73 iso_pu_bacteria 2643221645 2644250122 267
74 iso_pu_bacteria 2643221664 2644360010 267
75 iso_pu_bacteria 2738541280 2738742838 267
76 iso_pu_bacteria 2738541300 2738846821 267
77 iso_pu_bacteria 2738543018 2739277709 267
78 iso_pu_bacteria 2738543030 2739346752 267
79 iso_pu_bacteria 2818991436 2819543114 267
80 iso_pu_bacteria 2857558681 2857564067 267
81 iso_pu_bacteria 2885266251 2885270722 267
82 iso_pu_bacteria 2900577576 2900579493 267
83 iso_pu_bacteria 2904424332 2904430053 267
84 3300009093 Ga0105240_10062887 Ga0105240_100628873 268
85 3300009545 Ga0105237_10061993 Ga0105237_100619934 268
86 3300009551 Ga0105238_10000632 Ga0105238_1000063232 268
87 3300010375 Ga0105239_10013144 Ga0105239_1001314412 268
88 3300021361 Ga0213872_10138528 Ga0213872_101385282 268
89 3300039447 Ga0436361_0496436 Ga0436361_0496436_1426_2244 268
90 iso_pu_bacteria 2511231026 2511383834 268
91 3300014325 Ga0163163_10190586 Ga0163163_101905865 269
92 3300014326 Ga0157380_10142746 Ga0157380_101427462 269
93 3300035398 Ga0316574_0053511 Ga0316574_0053511_1627_2439 269
94 3300049568 Ga0501031_0099972 Ga0501031_0099972_63_887 269
95 3300049572 Ga0501036_0052662 Ga0501036_0052662_1438_2262 269
96 3300049574 Ga0501038_0234176 Ga0501038_0234176_15_839 269
97 3300049576 Ga0501040_0110426 Ga0501040_0110426_316_1140 269
98 3300049578 Ga0501042_0036265 Ga0501042_0036265_796_1620 269
99 3300049580 Ga0501046_0375522 Ga0501046_0375522_17_841 269
100 3300049582 Ga0501048_0032988 Ga0501048_0032988_2904_3728 269
101 3300049824 Ga0501045_0188167 Ga0501045_0188167_92_916 269
102 3300054114 Ga0501084_0190610 Ga0501084_0190610_131_955 269
103 3300060353 Ga0501082_0165793 Ga0501082_0165793_120_944 269
104 3300002704 JGI25155J39150_1000396 JGI25155J39150_100039610 270
105 3300002705 JGI25156J39149_1001044 JGI25156J39149_10010445 270
106 3300002738 JGI25154J39366_1000878 JGI25154J39366_10008789 270
107 3300002741 JGI25157J39369_1000094 JGI25157J39369_10000949 270
108 3300003758 Ga0055532_1000017 Ga0055532_1000017212 270
109 3300005331 Ga0070670_100098566 Ga0070670_1000985663 270
110 3300005366 Ga0070659_100002419 Ga0070659_1000024198 270
111 3300005563 Ga0068855_100293592 Ga0068855_1002935922 270
112 3300005564 Ga0070664_100032939 Ga0070664_1000329395 270
113 3300005616 Ga0068852_100028089 Ga0068852_1000280892 270
114 3300009011 Ga0105251_10034610 Ga0105251_100346102 270
115 3300009093 Ga0105240_10001581 Ga0105240_1000158126 270
116 3300009551 Ga0105238_10140644 Ga0105238_101406443 270
117 3300009553 Ga0105249_10990080 Ga0105249_109900801 270
118 3300015261 Ga0182006_1027971 Ga0182006_10279712 270
119 3300021361 Ga0213872_10000191 Ga0213872_1000019124 270
120 3300025206 Ga0209435_100015 Ga0209435_100015227 270
121 3300025229 Ga0209147_100004 Ga0209147_1000041000 270
122 3300025233 Ga0209437_100045 Ga0209437_100045319 270
123 3300025242 Ga0209258_100304 Ga0209258_10030463 270
124 3300025246 Ga0209646_1000040 Ga0209646_1000040257 270
125 3300025250 Ga0209026_1000034 Ga0209026_100003463 270
126 3300025256 Ga0209759_1000049 Ga0209759_1000049141 270
127 3300025913 Ga0207695_10009565 Ga0207695_100095655 270
128 3300025924 Ga0207694_10054971 Ga0207694_100549711 270
129 3300025945 Ga0207679_10001631 Ga0207679_1000163110 270
130 3300025949 Ga0207667_10013369 Ga0207667_100133697 270
131 3300026142 Ga0207698_10010015 Ga0207698_100100155 270
132 3300028653 Ga0265323_10005151 Ga0265323_100051513 270
133 3300031241 Ga0265325_10035120 Ga0265325_100351202 270
134 3300031344 Ga0265316_10297751 Ga0265316_102977511 270
135 3300031711 Ga0265314_10015921 Ga0265314_100159212 270
136 3300031712 Ga0265342_10085051 Ga0265342_100850511 270
137 3300035398 Ga0316574_0023267 Ga0316574_0023267_1147_1962 270
138 3300037471 Ga0395905_0001697 Ga0395905_0001697_17843_18661 270
139 3300039093 Ga0400489_15158 Ga0400489_15158_551_1363 270
140 3300039447 Ga0436361_0788745 Ga0436361_0788745_22312_23130 270
141 3300042876 Ga0451577_0000427 Ga0451577_0000427_31546_32373 270
142 3300044712 Ga0453684_0001477 Ga0453684_0001477_18088_18915 270
143 3300044712 Ga0453684_0011791 Ga0453684_0011791_9735_10547 270
144 3300045051 Ga0451576_0033074 Ga0451576_0033074_572_1396 270
145 3300046507 Ga0495606_0003242 Ga0495606_0003242_14637_15449 270
146 3300046660 Ga0495625_0005650 Ga0495625_0005650_2687_3505 270
147 3300048919 Ga0496116_0023635 Ga0496116_0023635_166_984 270
148 3300048925 Ga0496122_0001512 Ga0496122_0001512_28106_28924 270
149 3300048926 Ga0496123_0001219 Ga0496123_0001219_8348_9166 270
150 3300048927 Ga0496124_0161924 Ga0496124_0161924_173_991 270
151 3300048928 Ga0496125_0006911 Ga0496125_0006911_8384_9202 270
152 3300048928 Ga0496125_0012635 Ga0496125_0012635_6856_7674 270
153 3300053125 Ga0500618_001346 Ga0500618_001346_7545_8363 270
154 3300053125 Ga0500618_001847 Ga0500618_001847_3053_3871 270
155 3300001979 JGI24740J21852_10000217 JGI24740J21852_1000021719 271
156 3300002705 JGI25156J39149_1006578 JGI25156J39149_10065783 271
157 3300002737 JGI25162J39368_1000025 JGI25162J39368_100002515 271
158 3300002737 JGI25162J39368_1000263 JGI25162J39368_100026315 271
159 3300002738 JGI25154J39366_1000561 JGI25154J39366_100056117 271
160 3300002771 JGI25163J39215_1003291 JGI25163J39215_10032912 271
161 3300003214 JGI25165J46597_1000054 JGI25165J46597_100005415 271
162 3300003751 Ga0055538_1000026 Ga0055538_1000026211 271
163 3300003752 Ga0055539_1000033 Ga0055539_1000033211 271
164 3300003756 Ga0055533_1000044 Ga0055533_1000044211 271
165 3300003756 Ga0055533_1002525 Ga0055533_10025254 271
166 3300003759 Ga0055525_1000052 Ga0055525_1000052211 271
167 3300003762 Ga0055542_1001312 Ga0055542_10013127 271
168 3300003771 Ga0055526_1000042 Ga0055526_100004242 271
169 3300003771 Ga0055526_1000125 Ga0055526_100012542 271
170 3300003841 Ga0055541_1000069 Ga0055541_100006977 271
171 3300003841 Ga0055541_1000362 Ga0055541_10003627 271
172 3300005337 Ga0070682_100154272 Ga0070682_1001542722 271
173 3300005337 Ga0070682_100163103 Ga0070682_1001631032 271
174 3300005366 Ga0070659_100001218 Ga0070659_10000121815 271
175 3300005616 Ga0068852_100104762 Ga0068852_1001047625 271
176 3300014969 Ga0157376_10051148 Ga0157376_100511484 271
177 3300015261 Ga0182006_1017217 Ga0182006_10172174 271
178 3300015262 Ga0182007_10008649 Ga0182007_100086495 271
179 3300015265 Ga0182005_1002091 Ga0182005_10020917 271
180 3300025224 Ga0209784_100020 Ga0209784_10002079 271
181 3300025224 Ga0209784_100449 Ga0209784_10044910 271
182 3300025225 Ga0209566_100020 Ga0209566_10002079 271
183 3300025225 Ga0209566_100238 Ga0209566_10023847 271
184 3300025226 Ga0209674_100035 Ga0209674_10003579 271
185 3300025226 Ga0209674_100218 Ga0209674_10021821 271
186 3300025230 Ga0209563_100038 Ga0209563_10003879 271
187 3300025230 Ga0209563_103194 Ga0209563_1031942 271
188 3300025231 Ga0207427_102519 Ga0207427_1025195 271
189 3300025233 Ga0209437_100066 Ga0209437_100066302 271
190 3300025246 Ga0209646_1000123 Ga0209646_100012321 271
191 3300025250 Ga0209026_1010150 Ga0209026_10101502 271
192 3300025253 Ga0209677_100031 Ga0209677_10003119 271
193 3300025253 Ga0209677_104259 Ga0209677_1042595 271
194 3300025254 Ga0209148_1000077 Ga0209148_1000077168 271
195 3300025256 Ga0209759_1003849 Ga0209759_10038495 271
196 3300025261 Ga0209233_1000060 Ga0209233_100006079 271
197 3300025295 Ga0209564_1000032 Ga0209564_100003284 271
198 3300025295 Ga0209564_1000464 Ga0209564_100046433 271
199 3300025728 Ga0207655_1008162 Ga0207655_10081625 271
200 3300025932 Ga0207690_10001813 Ga0207690_1000181310 271
201 3300030521 Ga0307511_10001169 Ga0307511_100011699 271
202 3300031251 Ga0265327_10013471 Ga0265327_100134716 271
203 3300032005 Ga0307411_10334723 Ga0307411_103347232 271
204 3300033179 Ga0307507_10055196 Ga0307507_100551962 271
205 3300036401 Ga0373937_0233820 Ga0373937_0233820_611_1432 271
206 3300037418 Ga0395900_0303507 Ga0395900_0303507_119_946 271
207 3300041451 Ga0451791_1289911 Ga0451791_1289911_175_990 271
208 3300041456 Ga0451795_1151766 Ga0451795_1151766_33_848 271
209 3300041494 Ga0451837_0862704 Ga0451837_0862704_569_1384 271
210 3300041512 Ga0451853_2595379 Ga0451853_2595379_68_883 271
211 3300042876 Ga0451577_0205382 Ga0451577_0205382_849_1673 271
212 3300042876 Ga0451577_0263626 Ga0451577_0263626_567_1391 271
213 3300042876 Ga0451577_0405865 Ga0451577_0405865_214_1035 271
214 3300044656 Ga0466969_0036081 Ga0466969_0036081_832_1647 271
215 3300044658 Ga0466972_0059382 Ga0466972_0059382_439_1254 271
216 3300044671 Ga0466978_0013215 Ga0466978_0013215_3215_4030 271
217 3300044693 Ga0466961_0000735 Ga0466961_0000735_16225_17040 271
218 3300044735 Ga0466968_0066882 Ga0466968_0066882_636_1457 271
219 3300044735 Ga0466968_0181642 Ga0466968_0181642_49_864 271
220 3300044765 Ga0466970_0010602 Ga0466970_0010602_852_1667 271
221 3300045049 Ga0466959_0021991 Ga0466959_0021991_595_1410 271
222 3300046452 Ga0495617_010079 Ga0495617_010079_470_1291 271
223 3300046454 Ga0495592_0199038 Ga0495592_0199038_85_912 271
224 3300046462 Ga0495651_0210246 Ga0495651_0210246_467_1294 271
225 3300046463 Ga0495653_0043296 Ga0495653_0043296_1675_2502 271
226 3300046507 Ga0495606_0000757 Ga0495606_0000757_13971_14792 271
227 3300046507 Ga0495606_0001963 Ga0495606_0001963_3636_4457 271
228 3300046507 Ga0495606_0017381 Ga0495606_0017381_3572_4393 271
229 3300046511 Ga0495608_0125514 Ga0495608_0125514_191_1018 271
230 3300046512 Ga0495610_0003067 Ga0495610_0003067_111_932 271
231 3300046512 Ga0495610_0010903 Ga0495610_0010903_2661_3482 271
232 3300046512 Ga0495610_0015241 Ga0495610_0015241_2517_3338 271
233 3300046514 Ga0495618_0049307 Ga0495618_0049307_959_1786 271
234 3300046516 Ga0495628_0010695 Ga0495628_0010695_5528_6355 271
235 3300046520 Ga0495637_0002740 Ga0495637_0002740_1389_2210 271
236 3300046522 Ga0495643_0000119 Ga0495643_0000119_112782_113603 271
237 3300046522 Ga0495643_0000153 Ga0495643_0000153_22621_23445 271
238 3300046522 Ga0495643_0006248 Ga0495643_0006248_1424_2248 271
239 3300046529 Ga0495652_0032785 Ga0495652_0032785_1683_2510 271
240 3300046529 Ga0495652_0050931 Ga0495652_0050931_1562_2389 271
241 3300046538 Ga0495609_0049921 Ga0495609_0049921_1019_1840 271
242 3300046539 Ga0495621_0002595 Ga0495621_0002595_174_1016 271
243 3300046542 Ga0495597_0000043 Ga0495597_0000043_85318_86142 271
244 3300046542 Ga0495597_0000810 Ga0495597_0000810_14185_15006 271
245 3300046543 Ga0495645_0023902 Ga0495645_0023902_1879_2706 271
246 3300046543 Ga0495645_0154628 Ga0495645_0154628_283_1110 271
247 3300046558 Ga0495633_0004198 Ga0495633_0004198_5733_6554 271
248 3300046660 Ga0495625_0015874 Ga0495625_0015874_1075_1896 271
249 3300046660 Ga0495625_0067483 Ga0495625_0067483_581_1402 271
250 3300046663 Ga0495635_0185623 Ga0495635_0185623_14_841 271
251 3300046680 Ga0495646_0014719 Ga0495646_0014719_1176_2003 271
252 3300046680 Ga0495646_0043295 Ga0495646_0043295_1181_2008 271
253 3300046694 Ga0495649_0010957 Ga0495649_0010957_3469_4290 271
254 3300046809 Ga0495600_0030397 Ga0495600_0030397_1284_2111 271
255 3300046810 Ga0495660_0003225 Ga0495660_0003225_3370_4194 271
256 3300047320 Ga0495672_0000113 Ga0495672_0000113_35527_36348 271
257 3300047443 Ga0495687_000795 Ga0495687_000795_24904_25728 271
258 3300047443 Ga0495687_000990 Ga0495687_000990_24748_25572 271
259 3300047445 Ga0495677_0017197 Ga0495677_0017197_1303_2124 271
260 3300048088 Ga0495602_0009159 Ga0495602_0009159_9131_9958 271
261 3300048090 Ga0495615_0002441 Ga0495615_0002441_30_872 271
262 3300048906 Ga0496103_0012767 Ga0496103_0012767_1136_1957 271
263 3300048914 Ga0496111_0051181 Ga0496111_0051181_1424_2290 271
264 3300048917 Ga0496114_0063819 Ga0496114_0063819_505_1326 271
265 3300049459 Ga0495678_000111 Ga0495678_000111_63464_64285 271
266 3300049679 Ga0501249_020568 Ga0501249_020568_506_1327 271
267 3300049766 Ga0501269_000414 Ga0501269_000414_2504_3325 271
268 3300050489 nmdc:mga03683_4118_c1 nmdc:mga03683_4118_c1_2248_3069 271
269 3300053092 Ga0500583_0006184 Ga0500583_0006184_1002_1829 271
270 3300053133 Ga0500655_006162 Ga0500655_006162_959_1786 271
271 3300053145 Ga0500586_000417 Ga0500586_000417_6589_7410 271
272 3300006946 Ga0079104_1007033 Ga0079104_10070332 272
273 3300025913 Ga0207695_10143654 Ga0207695_101436541 272
274 3300025961 Ga0207712_10150977 Ga0207712_101509772 272
275 3300042876 Ga0451577_0007019 Ga0451577_0007019_1435_2256 272
276 3300042876 Ga0451577_0078549 Ga0451577_0078549_1032_1853 272
277 3300045051 Ga0451576_0000621 Ga0451576_0000621_28625_29446 272
278 3300015262 Ga0182007_10010689 Ga0182007_100106893 273
279 3300046462 Ga0495651_0005592 Ga0495651_0005592_2859_3692 273
280 3300046516 Ga0495628_0001431 Ga0495628_0001431_14204_15037 273
281 3300046529 Ga0495652_0019736 Ga0495652_0019736_2969_3802 273
282 3300046679 Ga0495623_0145565 Ga0495623_0145565_43_876 273
283 3300042876 Ga0451577_0026607 Ga0451577_0026607_4061_4888 274
284 3300044712 Ga0453684_0379904 Ga0453684_0379904_702_1529 274
285 3300047469 Ga0495673_0000096 Ga0495673_0000096_58031_58903 274
286 3300009093 Ga0105240_10200244 Ga0105240_102002443 275
287 3300037312 Ga0395899_0077983 Ga0395899_0077983_1487_2320 275
288 3300037418 Ga0395900_0172856 Ga0395900_0172856_257_1090 275
289 3300038443 Ga0395901_0141189 Ga0395901_0141189_573_1406 275
290 3300038443 Ga0395901_0264006 Ga0395901_0264006_573_1406 275
291 3300037312 Ga0395899_0002598 Ga0395899_0002598_6312_7148 276
292 3300046810 Ga0495660_0000791 Ga0495660_0000791_1236_2075 276
293 3300002738 JGI25154J39366_1000945 JGI25154J39366_10009459 277
294 3300005339 Ga0070660_100000550 Ga0070660_10000055026 277
295 3300025206 Ga0209435_100112 Ga0209435_10011224 277
296 3300025246 Ga0209646_1000020 Ga0209646_1000020202 277
297 3300025250 Ga0209026_1002489 Ga0209026_10024897 277
298 3300025256 Ga0209759_1000073 Ga0209759_10000738 277
299 3300025920 Ga0207649_10028377 Ga0207649_100283773 277
300 3300025932 Ga0207690_10074267 Ga0207690_100742673 277
301 3300025945 Ga0207679_10197985 Ga0207679_101979852 277
302 3300038443 Ga0395901_0079060 Ga0395901_0079060_83_934 277
303 iso_pu_bacteria 2511231003 2511250122 277
304 3300037312 Ga0395899_0002403 Ga0395899_0002403_2328_3182 278
305 3300037418 Ga0395900_0185101 Ga0395900_0185101_120_974 278
306 3300037471 Ga0395905_0001953 Ga0395905_0001953_15637_16530 278
307 3300037471 Ga0395905_0063933 Ga0395905_0063933_1778_2632 278
308 3300041456 Ga0451795_0272015 Ga0451795_0272015_42_884 278
309 3300044684 Ga0466966_0009690 Ga0466966_0009690_1215_2090 278
310 3300044706 Ga0466964_0026630 Ga0466964_0026630_823_1674 278
311 3300048924 Ga0496121_0029725 Ga0496121_0029725_840_1685 278
312 3300048928 Ga0496125_0000545 Ga0496125_0000545_49854_50714 278
313 3300061719 Ga0466962_0036859 Ga0466962_0036859_642_1511 278
314 iso_pu_bacteria 2596583598 2597031782 279
315 iso_pu_bacteria 2599185178 2599446477 279
316 iso_pu_bacteria 2928058823 2928061541 279
317 3300014497 Ga0182008_10044249 Ga0182008_100442493 281
318 3300015261 Ga0182006_1006942 Ga0182006_10069422 281
319 3300002705 JGI25156J39149_1007987 JGI25156J39149_10079872 282
320 3300004625 Ga0055543_1000681 Ga0055543_100068118 282
321 3300001915 JGI24741J21665_1000067 JGI24741J21665_100006712 283
322 3300001979 JGI24740J21852_10000413 JGI24740J21852_100004135 283
323 3300002705 JGI25156J39149_1004209 JGI25156J39149_10042095 283
324 3300003187 JGI25151J46595_10015385 JGI25151J46595_100153853 283
325 3300003752 Ga0055539_1000148 Ga0055539_100014846 283
326 3300003758 Ga0055532_1000072 Ga0055532_100007221 283
327 3300003759 Ga0055525_1000463 Ga0055525_100046322 283
328 3300003760 Ga0055527_1000480 Ga0055527_10004809 283
329 3300003761 Ga0055535_1000053 Ga0055535_100005321 283
330 3300003763 Ga0055529_1000099 Ga0055529_100009999 283
331 3300003841 Ga0055541_1007026 Ga0055541_10070262 283
332 3300005289 Ga0065704_10225084 Ga0065704_102250841 283
333 3300005337 Ga0070682_100226468 Ga0070682_1002264681 283
334 3300005344 Ga0070661_100000322 Ga0070661_10000032221 283
335 3300005455 Ga0070663_100000016 Ga0070663_10000001621 283
336 3300005564 Ga0070664_100000017 Ga0070664_10000001721 283
337 3300005577 Ga0068857_100001690 Ga0068857_1000016906 283
338 3300005578 Ga0068854_100000078 Ga0068854_10000007822 283
339 3300005614 Ga0068856_100001143 Ga0068856_1000011438 283
340 3300013100 Ga0157373_10249651 Ga0157373_102496511 283
341 3300013102 Ga0157371_10000475 Ga0157371_1000047530 283
342 3300013104 Ga0157370_10000488 Ga0157370_1000048831 283
343 3300013105 Ga0157369_10043541 Ga0157369_100435416 283
344 3300013307 Ga0157372_10001403 Ga0157372_1000140321 283
345 3300015261 Ga0182006_1001152 Ga0182006_100115215 283
346 3300020070 Ga0206356_11424634 Ga0206356_114246342 283
347 3300020075 Ga0206349_1457021 Ga0206349_14570213 283
348 3300020076 Ga0206355_1189558 Ga0206355_11895583 283
349 3300020077 Ga0206351_10090128 Ga0206351_100901286 283
350 3300020080 Ga0206350_10303671 Ga0206350_103036712 283
351 3300020610 Ga0154015_1471839 Ga0154015_14718396 283
352 3300022467 Ga0224712_10016653 Ga0224712_100166533 283
353 3300025224 Ga0209784_100063 Ga0209784_10006351 283
354 3300025225 Ga0209566_100048 Ga0209566_10004896 283
355 3300025225 Ga0209566_100376 Ga0209566_10037610 283
356 3300025226 Ga0209674_100071 Ga0209674_100071121 283
357 3300025226 Ga0209674_100151 Ga0209674_1001514 283
358 3300025228 Ga0209672_100193 Ga0209672_10019333 283
359 3300025229 Ga0209147_100002 Ga0209147_100002101 283
360 3300025230 Ga0209563_100085 Ga0209563_100085121 283
361 3300025242 Ga0209258_100002 Ga0209258_100002101 283
362 3300025250 Ga0209026_1012761 Ga0209026_10127612 283
363 3300025253 Ga0209677_100040 Ga0209677_10004096 283
364 3300025256 Ga0209759_1011204 Ga0209759_10112043 283
365 3300025272 Ga0209455_1000149 Ga0209455_100014922 283
366 3300025913 Ga0207695_10000891 Ga0207695_1000089115 283
367 3300025920 Ga0207649_10000051 Ga0207649_1000005182 283
368 3300025945 Ga0207679_10000042 Ga0207679_1000004221 283
369 3300025981 Ga0207640_10000165 Ga0207640_1000016512 283
370 3300026067 Ga0207678_10000418 Ga0207678_1000041821 283
371 3300026078 Ga0207702_10000156 Ga0207702_1000015675 283
372 3300026116 Ga0207674_10002727 Ga0207674_1000272713 283
373 3300037418 Ga0395900_0026742 Ga0395900_0026742_3618_4469 283
374 3300059508 Ga0587088_001793 Ga0587088_001793_110_961 283
375 3300059643 Ga0587072_001578 Ga0587072_001578_1842_2693 283

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00215

OMPdecase

Orotidine 5'-phosphate decarboxylase / HUMPS family

45

275

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
3qw4-assembly1.cif.gz_C structure of leishmania donovani ump synthase 0.9516 12 281
3qw3-assembly1.cif.gz_B structure of leishmania donovani omp decarboxylase 0.9384 13 282
3qw3-assembly1.cif.gz_A structure of leishmania donovani omp decarboxylase 0.9368 13 282
3qw3-assembly1.cif.gz_B structure of leishmania donovani omp decarboxylase 0.9275 13 282
3qw4-assembly1.cif.gz_B structure of leishmania donovani ump synthase 0.9274 12 279
ID Description Score Start End Superfamily
af_Q4DBZ4_1_160_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9682 118 283 3.20.20.70
af_Q4DBZ4_1_160_3.20.20.70 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9564 118 283 3.20.20.70
3qw4B01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9282 12 278 3.20.20.70
3qw4B01 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.9212 12 278 3.20.20.70
4mjzA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Aldolase class I 0.8692 12 280 3.20.20.70
ID Description Score Start End GO Terms
AF-I3UFK7-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) 1.002 53 134 GO:0004590
GO:0006207
GO:0044205
AF-A6SVJ9-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) 0.9972 13 283 GO:0004590
GO:0006207
GO:0044205
AF-A3RS26-F1-model_v4 deleted 0.9957 13 230
AF-A0A7C3XW98-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) 0.9945 13 281 GO:0004590
GO:0006207
GO:0044205
AF-A6SVJ9-F1-model_v4 Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP decarboxylase) (OMPDCase) (OMPdecase) 0.9935 13 283 GO:0004590
GO:0006207
GO:0044205

Feature Viewer

pLDDT pTM Quality
92.79 0.91 High
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Predicted Structure (AlphaFold2)

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