F426990

General Info

Members Datasets Scaffolds Average Seq Length
375 193 750 530

Family's Representative Sequence

Representative Sequence 3300005937|Ga0081455_10054145|Ga0081455_100541452
Length 580
Sequence MEFNLADLFEHSVDNFGDREYLVADGKRRTYAEMEARANQLAHHLASEGIGPGDHVGIYGVNSAEWVESLWAIFKLRAVWININYRYVEDELAYLFGNADLKALIHDAAFTERVAGVAEHMPDLRHRLIIGGDYDDALAAASPERDFGPRSPDDRYILYTGGTTGMPKGVVWRHEDVLFALGGGIDILSGDRAQAPGDLVARGRKLGFALTFLPIAPLMHGATQWAVMGQSFQGHRVVLMSQFDPHEVWRLVEAEKANSIVMTGDAMARPLIEALAEEPSASRDLSSILSLSSTAAIFSPSLKDQFLDRFPNVVITDAVGSSEGGANGVVVVEKGRTAMRGGPTVSPVQGTVVLDDELRPVAPGSGVIGRVARSGDIPLEYYGDPVKTASTFVEVDGTRYVIPGDLAMVEADGSVTLLGRGAQSINSGGEKIFPEEVESAVGSHPDVYDVVVVGVPDDRWGERIAAVVQARDGSAPTLEGLQEHCRAQIAGYKLPRVLVLVDRVEIVEDGALVLVSVEGSHFLWKMVRRMVGFLVEVGRGGAPPKDPARYTAPPSGLFLERVYYKGDRRDEPVRAVTPLL

Samples

Sample ID Description Type Environment
1 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003373 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
7 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
8 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
9 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
10 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
11 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
12 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
13 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
14 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
15 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
16 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
17 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
18 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
19 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
20 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
21 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
22 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
23 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
24 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
25 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
26 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
27 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
28 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
29 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
30 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
32 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
33 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
34 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
35 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
36 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
40 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
48 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
49 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
50 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
51 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
52 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
53 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
54 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
55 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
56 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
57 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
58 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
61 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
62 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
63 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
64 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
65 3300036459 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
66 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
69 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
70 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
71 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
72 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
73 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
74 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
75 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
76 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
77 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
78 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
79 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
80 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
81 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
82 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
83 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
84 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
85 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
86 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
87 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
88 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
89 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
90 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
91 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
92 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
93 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
96 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
97 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
98 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
99 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
100 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
101 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
102 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
103 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
104 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
105 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
106 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
107 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
108 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
109 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
110 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
111 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
112 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
113 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
114 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
115 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
116 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
117 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
118 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
119 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
120 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
121 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
122 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
123 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
124 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
125 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
126 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
142 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
145 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
146 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
147 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
148 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
149 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
150 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
151 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
152 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
153 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
154 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
158 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
159 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
160 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
161 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
162 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
163 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
164 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
165 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
166 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
167 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
168 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
169 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
170 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
171 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
172 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
173 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
174 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
175 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
176 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
179 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
180 2517572101 Frankia sp. DC12 Isolate Nodule
181 2547132424 Nocardia nova SH22a Isolate Unclassified
182 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
183 2643221692 Nocardia sp. Root136 Isolate Unclassified
184 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
185 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
186 2791354901 Actinophytocola xanthii 11-183 Isolate Rhizosphere
187 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
188 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
189 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
190 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
191 8002775197 Frankia nepalensis CN7 Isolate Nodule
192 8002784119 Frankia sp. AgB1.9 Isolate Nodule
193 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 96
Metatranscriptomes 0.27
Isolates 3.73

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.73
Nodule 0.8
Rhizoplane 4.8
Rhizosphere 83.73
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081455_10054145 3300005937 Bacteria 3422
2 JGI25406J46586_10000251 3300003203 Bacteria 23902
3 JGI25407J50210_10000412 3300003373 Bacteria 8282
4 JGI25407J50210_10013497 3300003373 Bacteria 2100
5 Ga0070683_100095584 3300005329 Bacteria 2794
6 Ga0070680_100013381 3300005336 Bacteria 6389
7 Ga0070675_100022216 3300005354 Bacteria 5068
8 Ga0070675_100037862 3300005354 Bacteria 3931
9 Ga0070713_100012415 3300005436 Bacteria 6247
10 Ga0070713_100067436 3300005436 Bacteria 3013
11 Ga0070710_10000777 3300005437 Bacteria 15246
12 Ga0070708_100000799 3300005445 Bacteria 23764
13 Ga0070681_10000022 3300005458 Bacteria 116402
14 Ga0070706_100021499 3300005467 Bacteria 5940
15 Ga0070706_100226656 3300005467 Bacteria 1744
16 Ga0070707_100041379 3300005468 Bacteria 4410
17 Ga0070698_100106618 3300005471 Bacteria 2770
18 Ga0070699_100000030 3300005518 Bacteria 149101
19 Ga0070679_100000004 3300005530 Bacteria 263662
20 Ga0070679_100023899 3300005530 Bacteria 5988
21 Ga0070684_100075402 3300005535 Bacteria 2975
22 Ga0070684_100103546 3300005535 Bacteria 2546
23 Ga0081455_10002654 3300005937 Bacteria 21166
24 Ga0081455_10003285 3300005937 Bacteria 18712
25 Ga0081455_10004830 3300005937 Bacteria 14963
26 Ga0081455_10020562 3300005937 Bacteria 6211
27 Ga0081455_10025769 3300005937 Bacteria 5422
28 Ga0081538_10000105 3300005981 Bacteria 83102
29 Ga0081538_10000633 3300005981 Bacteria 38961
30 Ga0081538_10012902 3300005981 Bacteria 6661
31 Ga0081538_10028209 3300005981 Bacteria 3868
32 Ga0081539_10000086 3300005985 Bacteria 217801
33 Ga0070717_10010299 3300006028 Bacteria 7050
34 Ga0075365_10004349 3300006038 Bacteria 7488
35 Ga0075365_10093299 3300006038 Bacteria 2053
36 Ga0075363_100001662 3300006048 Bacteria 8600
37 Ga0075363_100008236 3300006048 Bacteria 4843
38 Ga0075363_100015275 3300006048 Bacteria 3771
39 Ga0075364_10012608 3300006051 Bacteria 5177
40 Ga0075428_100000074 3300006844 Bacteria 82188
41 Ga0075428_100000246 3300006844 Bacteria 53194
42 Ga0075428_100007324 3300006844 Bacteria 12226
43 Ga0075428_100016838 3300006844 Bacteria 8073
44 Ga0075428_100022664 3300006844 Bacteria 6951
45 Ga0075428_100072717 3300006844 Bacteria 3756
46 Ga0075428_100074914 3300006844 Bacteria 3697
47 Ga0075430_100002564 3300006846 Bacteria 15150
48 Ga0075430_100008109 3300006846 Bacteria 8879
49 Ga0075431_100005073 3300006847 Bacteria 12955
50 Ga0075431_100021157 3300006847 Bacteria 6647
51 Ga0075431_100138022 3300006847 Bacteria 2514
52 Ga0075433_10002273 3300006852 Bacteria 14613
53 Ga0075434_100049001 3300006871 Bacteria 4192
54 Ga0075429_100000048 3300006880 Bacteria 56393
55 Ga0075429_100024980 3300006880 Bacteria 5187
56 Ga0075429_100045099 3300006880 Bacteria 3836
57 Ga0075429_100103024 3300006880 Bacteria 2492
58 Ga0075435_100029216 3300007076 Bacteria 4326
59 Ga0111539_10138443 3300009094 Bacteria 2851
60 Ga0111539_10230746 3300009094 Bacteria 2155
61 Ga0105245_10089786 3300009098 Bacteria 2825
62 Ga0114129_10001165 3300009147 Bacteria 34871
63 Ga0114129_10003209 3300009147 Bacteria 22944
64 Ga0114129_10005294 3300009147 Bacteria 18205
65 Ga0114129_10054098 3300009147 Bacteria 5629
66 Ga0114129_10085966 3300009147 Bacteria 4363
67 Ga0114129_10239054 3300009147 Bacteria 2442
68 Ga0114129_10355524 3300009147 Bacteria 1939
69 Ga0105243_10048478 3300009148 Bacteria 3349
70 Ga0105242_10060243 3300009176 Bacteria 3118
71 Ga0105242_10061163 3300009176 Bacteria 3097
72 Ga0105248_10157371 3300009177 Bacteria 2564
73 Ga0157378_10185054 3300013297 Bacteria 1961
74 Ga0157372_10107529 3300013307 Bacteria 3191
75 Ga0163163_10032455 3300014325 Bacteria 5043
76 Ga0213876_10002385 3300021384 Bacteria 11058
77 Ga0213876_10010505 3300021384 Bacteria 4964
78 Ga0213876_10021354 3300021384 Bacteria 3425
79 Ga0213876_10034232 3300021384 Bacteria 2679
80 Ga0207684_10027418 3300025910 Bacteria 4854
81 Ga0207684_10105240 3300025910 Bacteria 2413
82 Ga0207707_10000029 3300025912 Bacteria 162223
83 Ga0207652_10000049 3300025921 Bacteria 123521
84 Ga0207652_10029244 3300025921 Bacteria 4605
85 Ga0207652_10141574 3300025921 Bacteria 2151
86 Ga0207659_10017900 3300025926 Bacteria 4636
87 Ga0207659_10107934 3300025926 Bacteria 2111
88 Ga0207700_10027767 3300025928 Bacteria 3969
89 Ga0207664_10006312 3300025929 Bacteria 8147
90 Ga0207689_10012305 3300025942 Bacteria 7322
91 Ga0265338_10000403 3300028800 Bacteria 77459
92 Ga0265338_10006134 3300028800 Bacteria 15427
93 Ga0265338_10011252 3300028800 Bacteria 10361
94 Ga0307512_10004790 3300030522 Bacteria 14537
95 Ga0316177_1160138 3300030731 Bacteria 3397
96 Ga0265325_10001411 3300031241 Bacteria 16903
97 Ga0265325_10022304 3300031241 Bacteria 3471
98 Ga0265325_10048200 3300031241 Bacteria 2203
99 Ga0265339_10000489 3300031249 Bacteria 30979
100 Ga0265339_10006169 3300031249 Bacteria 7897
101 Ga0265339_10043014 3300031249 Bacteria 2500
102 Ga0265327_10000132 3300031251 Bacteria 164105
103 Ga0265327_10001062 3300031251 Bacteria 38317
104 Ga0265327_10003136 3300031251 Bacteria 16239
105 Ga0265327_10005305 3300031251 Bacteria 10812
106 Ga0265327_10007465 3300031251 Bacteria 8433
107 Ga0265316_10039735 3300031344 Bacteria 3777
108 Ga0307513_10107503 3300031456 Bacteria 2792
109 Ga0265313_10001270 3300031595 Bacteria 23928
110 Ga0265313_10003498 3300031595 Bacteria 12665
111 Ga0265314_10012134 3300031711 Bacteria 7057
112 Ga0265314_10042388 3300031711 Bacteria 3247
113 Ga0265342_10006840 3300031712 Bacteria 8425
114 Ga0307413_10040095 3300031824 Bacteria 2730
115 Ga0307409_100002588 3300031995 Bacteria 9506
116 Ga0307409_100091632 3300031995 Bacteria 2492
117 Ga0307409_100100835 3300031995 Bacteria 2394
118 Ga0307411_10052058 3300032005 Bacteria 2675
119 Ga0307510_10002566 3300033180 Bacteria 20695
120 Ga0373926_0016745 3300035083 Bacteria 2511
121 Ga0373947_0028212 3300035725 Bacteria 3288
122 Ga0373937_0105501 3300036401 Bacteria 2618
123 Ga0372808_004747 3300036459 Bacteria 1754
124 Ga0373925_0025753 3300037068 Bacteria 4301
125 Ga0395898_0045275 3300037466 Bacteria 4326
126 Ga0436365_0358756 3300039437 Bacteria 7560
127 Ga0436365_0429539 3300039437 Bacteria 4817
128 Ga0436365_0545832 3300039437 Bacteria 6536
129 Ga0436365_0592964 3300039437 Bacteria 16397
130 Ga0436365_0647710 3300039437 Bacteria 1912
131 Ga0436365_1171838 3300039437 Bacteria 5034
132 Ga0436365_1880903 3300039437 Bacteria 3635
133 Ga0439450_000168 3300042008 Bacteria 7461
134 Ga0439434_0001223 3300042435 Bacteria 7400
135 Ga0439460_0002583 3300042461 Bacteria 4372
136 Ga0439440_0010928 3300042993 Bacteria 1907
137 Ga0466969_0016021 3300044656 Bacteria 3928
138 Ga0466965_0000903 3300044683 Bacteria 11351
139 Ga0466965_0014172 3300044683 Bacteria 3772
140 Ga0466966_0000710 3300044684 Bacteria 21114
141 Ga0466961_0001138 3300044693 Bacteria 16324
142 Ga0466968_0028239 3300044735 Bacteria 2313
143 Ga0466957_0004827 3300044842 Bacteria 7546
144 Ga0466960_0020777 3300044901 Bacteria 2914
145 Ga0466958_0001170 3300045836 Bacteria 12209
146 Ga0466967_0131485 3300045976 Bacteria 2324
147 Ga0495641_0029550 3300046461 Bacteria 2640
148 Ga0495653_0042092 3300046463 Bacteria 3560
149 Ga0495580_0027290 3300046472 Bacteria 4155
150 Ga0495639_0024937 3300046475 Bacteria 2635
151 Ga0495596_0003964 3300046500 Bacteria 7319
152 Ga0495606_0000029 3300046507 Bacteria 250473
153 Ga0495608_0040453 3300046511 Bacteria 3123
154 Ga0495618_0045100 3300046514 Bacteria 2781
155 Ga0495630_0096723 3300046517 Bacteria 2232
156 Ga0495630_0128094 3300046517 Bacteria 1927
157 Ga0495631_0005810 3300046518 Bacteria 6433
158 Ga0495652_0016516 3300046529 Bacteria 6602
159 Ga0495640_0012744 3300046533 Bacteria 6419
160 Ga0495586_0004665 3300046535 Bacteria 7329
161 Ga0495621_0019391 3300046539 Bacteria 2220
162 Ga0495597_0021901 3300046542 Bacteria 2969
163 Ga0495633_0000148 3300046558 Bacteria 93134
164 Ga0495667_0000792 3300046559 Bacteria 20332
165 Ga0495667_0011144 3300046559 Bacteria 6086
166 Ga0495668_0000007 3300046616 Bacteria 552902
167 Ga0495634_0002183 3300046642 Bacteria 16442
168 Ga0495634_0024100 3300046642 Bacteria 4273
169 Ga0495634_0063075 3300046642 Bacteria 2460
170 Ga0495625_0008676 3300046660 Bacteria 8635
171 Ga0495657_0001472 3300046675 Bacteria 20271
172 Ga0495613_0000433 3300046689 Bacteria 35770
173 Ga0495613_0000622 3300046689 Bacteria 28216
174 Ga0495671_0071386 3300046692 Bacteria 1706
175 Ga0495604_0031651 3300047317 Bacteria 4196
176 Ga0495672_0000575 3300047320 Bacteria 41492
177 Ga0495672_0001308 3300047320 Bacteria 24800
178 Ga0495672_0007440 3300047320 Bacteria 8238
179 Ga0495680_0001915 3300047322 Bacteria 21849
180 Ga0495680_0022964 3300047322 Bacteria 5192
181 Ga0495683_0031083 3300047323 Bacteria 2721
182 Ga0495675_0047182 3300047444 Bacteria 2741
183 Ga0495677_0005944 3300047445 Bacteria 4622
184 Ga0495681_0026973 3300047470 Bacteria 2979
185 Ga0495684_0070473 3300047471 Bacteria 2658
186 Ga0495614_0022164 3300048089 Bacteria 2743
187 Ga0496102_0021450 3300048905 Bacteria 5712
188 Ga0496104_0058837 3300048907 Bacteria 3638
189 Ga0496104_0095749 3300048907 Bacteria 2840
190 Ga0496105_0022317 3300048908 Bacteria 5127
191 Ga0496105_0050339 3300048908 Bacteria 3441
192 Ga0496108_0007394 3300048911 Bacteria 8907
193 Ga0496108_0019536 3300048911 Bacteria 5565
194 Ga0496109_0110639 3300048912 Bacteria 2554
195 Ga0496111_0063930 3300048914 Bacteria 2669
196 Ga0496112_0000473 3300048915 Bacteria 26892
197 Ga0496112_0002497 3300048915 Bacteria 14841
198 Ga0496112_0002821 3300048915 Bacteria 14115
199 Ga0496112_0018822 3300048915 Bacteria 6508
200 Ga0496112_0082530 3300048915 Bacteria 3179
201 Ga0496112_0154851 3300048915 Bacteria 2259
202 Ga0496112_0155848 3300048915 Bacteria 2251
203 Ga0496113_0159458 3300048916 Bacteria 1783
204 Ga0496115_0009404 3300048918 Bacteria 7262
205 Ga0496116_0000111 3300048919 Bacteria 182552
206 Ga0496118_0001164 3300048921 Bacteria 40539
207 Ga0496119_0009281 3300048922 Bacteria 8469
208 Ga0501031_0006894 3300049568 Bacteria 7414
209 Ga0501032_0002202 3300049569 Bacteria 15333
210 Ga0501033_0027191 3300049570 Bacteria 4303
211 Ga0501034_0000312 3300049571 Bacteria 86122
212 Ga0501034_0000751 3300049571 Bacteria 48852
213 Ga0501034_0002469 3300049571 Bacteria 22264
214 Ga0501034_0006953 3300049571 Bacteria 12094
215 Ga0501034_0014511 3300049571 Bacteria 8113
216 Ga0501036_0001689 3300049572 Bacteria 17138
217 Ga0501036_0008851 3300049572 Bacteria 8265
218 Ga0501036_0038043 3300049572 Bacteria 4071
219 Ga0501036_0115100 3300049572 Bacteria 2272
220 Ga0501036_0247726 3300049572 Bacteria 1493
221 Ga0501037_0001378 3300049573 Bacteria 17808
222 Ga0501037_0010342 3300049573 Bacteria 6845
223 Ga0501037_0036903 3300049573 Bacteria 3602
224 Ga0501037_0073111 3300049573 Bacteria 2493
225 Ga0501038_0000916 3300049574 Bacteria 26168
226 Ga0501038_0007062 3300049574 Bacteria 10369
227 Ga0501038_0051274 3300049574 Bacteria 3563
228 Ga0501038_0052058 3300049574 Bacteria 3531
229 Ga0501038_0074390 3300049574 Bacteria 2874
230 Ga0501039_0006441 3300049575 Bacteria 8922
231 Ga0501039_0013730 3300049575 Bacteria 6196
232 Ga0501039_0015194 3300049575 Bacteria 5892
233 Ga0501039_0042814 3300049575 Bacteria 3498
234 Ga0501040_0005076 3300049576 Bacteria 8507
235 Ga0501040_0008243 3300049576 Bacteria 6776
236 Ga0501040_0026658 3300049576 Bacteria 3888
237 Ga0501040_0030801 3300049576 Bacteria 3624
238 Ga0501041_0009022 3300049577 Bacteria 5866
239 Ga0501041_0015100 3300049577 Bacteria 4587
240 Ga0501041_0017007 3300049577 Bacteria 4327
241 Ga0501041_0028294 3300049577 Bacteria 3381
242 Ga0501042_0005775 3300049578 Bacteria 7990
243 Ga0501043_0001727 3300049579 Bacteria 18879
244 Ga0501043_0147313 3300049579 Bacteria 1843
245 Ga0501046_0002867 3300049580 Bacteria 15994
246 Ga0501046_0019551 3300049580 Bacteria 5616
247 Ga0501046_0108595 3300049580 Bacteria 2122
248 Ga0501047_0209483 3300049581 Bacteria 1808
249 Ga0501048_0001640 3300049582 Bacteria 17048
250 Ga0501048_0020986 3300049582 Bacteria 4785
251 Ga0501048_0054843 3300049582 Bacteria 2831
252 Ga0501068_0000438 3300049584 Bacteria 21136
253 Ga0501068_0008327 3300049584 Bacteria 5767
254 Ga0501068_0008421 3300049584 Bacteria 5738
255 Ga0501069_0004888 3300049585 Bacteria 6942
256 Ga0501069_0008503 3300049585 Bacteria 5398
257 Ga0501069_0013504 3300049585 Bacteria 4355
258 Ga0501070_0003417 3300049586 Bacteria 13771
259 Ga0501070_0006911 3300049586 Bacteria 9656
260 Ga0501070_0012899 3300049586 Bacteria 7043
261 Ga0501070_0013971 3300049586 Bacteria 6760
262 Ga0501070_0025125 3300049586 Bacteria 4995
263 Ga0501070_0033493 3300049586 Bacteria 4300
264 Ga0501071_0003327 3300049587 Bacteria 10040
265 Ga0501071_0006570 3300049587 Bacteria 7552
266 Ga0501071_0027619 3300049587 Bacteria 3994
267 Ga0501071_0130648 3300049587 Bacteria 1865
268 Ga0501072_0002110 3300049588 Bacteria 14819
269 Ga0501072_0003066 3300049588 Bacteria 12599
270 Ga0501072_0010586 3300049588 Bacteria 7023
271 Ga0501072_0012046 3300049588 Bacteria 6607
272 Ga0501072_0043442 3300049588 Bacteria 3532
273 Ga0501072_0118977 3300049588 Bacteria 2105
274 Ga0501073_0003893 3300049589 Bacteria 11210
275 Ga0501073_0004665 3300049589 Bacteria 10297
276 Ga0501073_0005502 3300049589 Bacteria 9487
277 Ga0501073_0009480 3300049589 Bacteria 7188
278 Ga0501073_0040694 3300049589 Bacteria 3287
279 Ga0501074_0000103 3300049590 Bacteria 41408
280 Ga0501074_0001434 3300049590 Bacteria 15929
281 Ga0501074_0020901 3300049590 Bacteria 4754
282 Ga0501074_0023525 3300049590 Bacteria 4478
283 Ga0501074_0054504 3300049590 Bacteria 2883
284 Ga0501075_0001950 3300049591 Bacteria 13617
285 Ga0501075_0020885 3300049591 Bacteria 4768
286 Ga0501076_0013095 3300049592 Bacteria 6210
287 Ga0501076_0023372 3300049592 Bacteria 4764
288 Ga0501076_0037991 3300049592 Bacteria 3778
289 Ga0501077_0000418 3300049593 Bacteria 25732
290 Ga0501077_0002167 3300049593 Bacteria 11867
291 Ga0501077_0010243 3300049593 Bacteria 5836
292 Ga0501077_0028550 3300049593 Bacteria 3546
293 Ga0501079_0001723 3300049741 Bacteria 15597
294 Ga0501079_0016513 3300049741 Bacteria 5639
295 Ga0501079_0017046 3300049741 Bacteria 5547
296 Ga0501079_0020809 3300049741 Bacteria 5017
297 Ga0501079_0021074 3300049741 Bacteria 4984
298 Ga0501080_0002194 3300049742 Bacteria 16958
299 Ga0501080_0006110 3300049742 Bacteria 10795
300 Ga0501080_0008123 3300049742 Bacteria 9508
301 Ga0501080_0014820 3300049742 Bacteria 7178
302 Ga0501080_0046885 3300049742 Bacteria 4023
303 Ga0501080_0129595 3300049742 Bacteria 2335
304 Ga0501081_0003425 3300049743 Bacteria 10118
305 Ga0501081_0006087 3300049743 Bacteria 7821
306 Ga0501081_0020577 3300049743 Bacteria 4398
307 Ga0501081_0033887 3300049743 Bacteria 3472
308 Ga0501083_0004548 3300049744 Bacteria 9800
309 Ga0501083_0017018 3300049744 Bacteria 5075
310 Ga0501083_0021659 3300049744 Bacteria 4463
311 Ga0501083_0065313 3300049744 Bacteria 2424
312 Ga0501035_0038504 3300049822 Bacteria 4329
313 Ga0501035_0046223 3300049822 Bacteria 3916
314 Ga0501044_0001922 3300049823 Bacteria 24047
315 Ga0501044_0005425 3300049823 Bacteria 14162
316 Ga0501044_0007960 3300049823 Bacteria 11645
317 Ga0501044_0008655 3300049823 Bacteria 11148
318 Ga0501045_0005141 3300049824 Bacteria 9056
319 Ga0501045_0007550 3300049824 Bacteria 7555
320 Ga0501045_0017017 3300049824 Bacteria 5163
321 nmdc:mga03683_22569_c1 3300050489 Bacteria 2441
322 nmdc:mga03n38_1091_c1 3300050490 Bacteria 7488
323 nmdc:mga00v17_3619_c1 3300050491 Bacteria 7988
324 nmdc:mga0yw44_36391_c1 3300050492 Bacteria 2900
325 nmdc:mga0yw44_544_c1 3300050492 Bacteria 8499
326 nmdc:mga05p37_1198_c1 3300050507 Bacteria 29987
327 nmdc:mga05p37_126701_c2 3300050507 Bacteria 2057
328 nmdc:mga05p37_221534_c1 3300050507 Bacteria 2283
329 nmdc:mga05p37_373_c1 3300050507 Bacteria 48181
330 nmdc:mga05p37_92294_c1 3300050507 Bacteria 3731
331 nmdc:mga05p37_99878_c1 3300050507 Bacteria 3574
332 nmdc:mga09592_52183_c1 3300050508 Bacteria 3451
333 nmdc:mga09592_8162_c1 3300050508 Bacteria 8515
334 nmdc:mga0qj67_1027_c1 3300050509 Bacteria 19309
335 nmdc:mga0qj67_6344_c1 3300050509 Bacteria 8686
336 nmdc:mga06r32_14278_c1 3300050510 Bacteria 7204
337 nmdc:mga06r32_22450_c1 3300050510 Bacteria 5835
338 nmdc:mga06r32_48210_c1 3300050510 Bacteria 4072
339 nmdc:mga08y16_115440_c1 3300050511 Bacteria 2795
340 nmdc:mga08y16_4896_c1 3300050511 Bacteria 13995
341 nmdc:mga0n895_5326_c1 3300050512 Bacteria 10715
342 nmdc:mga0rr50_105637_c1 3300050513 Bacteria 2221
343 nmdc:mga08x19_17374_c1 3300050514 Bacteria 4401
344 nmdc:mga0a205_21381_c1 3300050515 Bacteria 6122
345 Ga0495595_0001223 3300053084 Bacteria 9994
346 Ga0495619_0046887 3300053085 Bacteria 2843
347 Ga0495619_0055815 3300053085 Bacteria 2617
348 Ga0500566_0001601 3300053094 Bacteria 13328
349 Ga0500568_0000030 3300053139 Bacteria 159567
350 Ga0500616_0020247 3300053153 Bacteria 3739
351 Ga0501084_0000580 3300054114 Bacteria 27978
352 Ga0501084_0002043 3300054114 Bacteria 16119
353 Ga0501084_0004617 3300054114 Bacteria 11250
354 Ga0501084_0010895 3300054114 Bacteria 7529
355 Ga0501084_0020731 3300054114 Bacteria 5482
356 Ga0501084_0072296 3300054114 Bacteria 2889
357 Ga0501082_0001475 3300060353 Bacteria 20669
358 Ga0466962_0044898 3300061719 Bacteria 2113
359 Ga0530510_0011245 3300061734 Bacteria 6278
360 Ga0530510_0017023 3300061734 Bacteria 5148
361 Ga0530510_0067028 3300061734 Bacteria 2604
362 2517760122 2517572101 Bacteria 6884336
363 2548692610 2547132424 Bacteria 8348532
364 2552105437 2551306166 Bacteria 9731570
365 2644517704 2643221692 Bacteria 7282860
366 2738892326 2738541308 Bacteria 7020677
367 2774396299 2773857762 Bacteria 5971770
368 2791910487 2791354901 Bacteria 8322202
369 2809197959 2808606439 Bacteria 5952208
370 2812353351 2811994878 Bacteria 5992952
371 2891969025 2891968417 Bacteria 5821697
372 2919718161 2919713450 Bacteria 7431245
373 8002780002 8002775197 Bacteria 10728764
374 8002786472 8002784119 Bacteria 9788632
375 8047715948 8047710418 Bacteria 11023148
376 Ga0081455_10054145
377 JGI25406J46586_10000251
378 JGI25407J50210_10000412
379 JGI25407J50210_10013497
380 Ga0070683_100095584
381 Ga0070680_100013381
382 Ga0070675_100022216
383 Ga0070675_100037862
384 Ga0070713_100012415
385 Ga0070713_100067436
386 Ga0070710_10000777
387 Ga0070708_100000799
388 Ga0070681_10000022
389 Ga0070706_100021499
390 Ga0070706_100226656
391 Ga0070707_100041379
392 Ga0070698_100106618
393 Ga0070699_100000030
394 Ga0070679_100000004
395 Ga0070679_100023899
396 Ga0070684_100075402
397 Ga0070684_100103546
398 Ga0081455_10002654
399 Ga0081455_10003285
400 Ga0081455_10004830
401 Ga0081455_10020562
402 Ga0081455_10025769
403 Ga0081538_10000105
404 Ga0081538_10000633
405 Ga0081538_10012902
406 Ga0081538_10028209
407 Ga0081539_10000086
408 Ga0070717_10010299
409 Ga0075365_10004349
410 Ga0075365_10093299
411 Ga0075363_100001662
412 Ga0075363_100008236
413 Ga0075363_100015275
414 Ga0075364_10012608
415 Ga0075428_100000074
416 Ga0075428_100000246
417 Ga0075428_100007324
418 Ga0075428_100016838
419 Ga0075428_100022664
420 Ga0075428_100072717
421 Ga0075428_100074914
422 Ga0075430_100002564
423 Ga0075430_100008109
424 Ga0075431_100005073
425 Ga0075431_100021157
426 Ga0075431_100138022
427 Ga0075433_10002273
428 Ga0075434_100049001
429 Ga0075429_100000048
430 Ga0075429_100024980
431 Ga0075429_100045099
432 Ga0075429_100103024
433 Ga0075435_100029216
434 Ga0111539_10138443
435 Ga0111539_10230746
436 Ga0105245_10089786
437 Ga0114129_10001165
438 Ga0114129_10003209
439 Ga0114129_10005294
440 Ga0114129_10054098
441 Ga0114129_10085966
442 Ga0114129_10239054
443 Ga0114129_10355524
444 Ga0105243_10048478
445 Ga0105242_10060243
446 Ga0105242_10061163
447 Ga0105248_10157371
448 Ga0157378_10185054
449 Ga0157372_10107529
450 Ga0163163_10032455
451 Ga0213876_10002385
452 Ga0213876_10010505
453 Ga0213876_10021354
454 Ga0213876_10034232
455 Ga0207684_10027418
456 Ga0207684_10105240
457 Ga0207707_10000029
458 Ga0207652_10000049
459 Ga0207652_10029244
460 Ga0207652_10141574
461 Ga0207659_10017900
462 Ga0207659_10107934
463 Ga0207700_10027767
464 Ga0207664_10006312
465 Ga0207689_10012305
466 Ga0265338_10000403
467 Ga0265338_10006134
468 Ga0265338_10011252
469 Ga0307512_10004790
470 Ga0316177_1160138
471 Ga0265325_10001411
472 Ga0265325_10022304
473 Ga0265325_10048200
474 Ga0265339_10000489
475 Ga0265339_10006169
476 Ga0265339_10043014
477 Ga0265327_10000132
478 Ga0265327_10001062
479 Ga0265327_10003136
480 Ga0265327_10005305
481 Ga0265327_10007465
482 Ga0265316_10039735
483 Ga0307513_10107503
484 Ga0265313_10001270
485 Ga0265313_10003498
486 Ga0265314_10012134
487 Ga0265314_10042388
488 Ga0265342_10006840
489 Ga0307413_10040095
490 Ga0307409_100002588
491 Ga0307409_100091632
492 Ga0307409_100100835
493 Ga0307411_10052058
494 Ga0307510_10002566
495 Ga0373926_0016745
496 Ga0373947_0028212
497 Ga0373937_0105501
498 Ga0372808_004747
499 Ga0373925_0025753
500 Ga0395898_0045275
501 Ga0436365_0358756
502 Ga0436365_0429539
503 Ga0436365_0545832
504 Ga0436365_0592964
505 Ga0436365_0647710
506 Ga0436365_1171838
507 Ga0436365_1880903
508 Ga0439450_000168
509 Ga0439434_0001223
510 Ga0439460_0002583
511 Ga0439440_0010928
512 Ga0466969_0016021
513 Ga0466965_0000903
514 Ga0466965_0014172
515 Ga0466966_0000710
516 Ga0466961_0001138
517 Ga0466968_0028239
518 Ga0466957_0004827
519 Ga0466960_0020777
520 Ga0466958_0001170
521 Ga0466967_0131485
522 Ga0495641_0029550
523 Ga0495653_0042092
524 Ga0495580_0027290
525 Ga0495639_0024937
526 Ga0495596_0003964
527 Ga0495606_0000029
528 Ga0495608_0040453
529 Ga0495618_0045100
530 Ga0495630_0096723
531 Ga0495630_0128094
532 Ga0495631_0005810
533 Ga0495652_0016516
534 Ga0495640_0012744
535 Ga0495586_0004665
536 Ga0495621_0019391
537 Ga0495597_0021901
538 Ga0495633_0000148
539 Ga0495667_0000792
540 Ga0495667_0011144
541 Ga0495668_0000007
542 Ga0495634_0002183
543 Ga0495634_0024100
544 Ga0495634_0063075
545 Ga0495625_0008676
546 Ga0495657_0001472
547 Ga0495613_0000433
548 Ga0495613_0000622
549 Ga0495671_0071386
550 Ga0495604_0031651
551 Ga0495672_0000575
552 Ga0495672_0001308
553 Ga0495672_0007440
554 Ga0495680_0001915
555 Ga0495680_0022964
556 Ga0495683_0031083
557 Ga0495675_0047182
558 Ga0495677_0005944
559 Ga0495681_0026973
560 Ga0495684_0070473
561 Ga0495614_0022164
562 Ga0496102_0021450
563 Ga0496104_0058837
564 Ga0496104_0095749
565 Ga0496105_0022317
566 Ga0496105_0050339
567 Ga0496108_0007394
568 Ga0496108_0019536
569 Ga0496109_0110639
570 Ga0496111_0063930
571 Ga0496112_0000473
572 Ga0496112_0002497
573 Ga0496112_0002821
574 Ga0496112_0018822
575 Ga0496112_0082530
576 Ga0496112_0154851
577 Ga0496112_0155848
578 Ga0496113_0159458
579 Ga0496115_0009404
580 Ga0496116_0000111
581 Ga0496118_0001164
582 Ga0496119_0009281
583 Ga0501031_0006894
584 Ga0501032_0002202
585 Ga0501033_0027191
586 Ga0501034_0000312
587 Ga0501034_0000751
588 Ga0501034_0002469
589 Ga0501034_0006953
590 Ga0501034_0014511
591 Ga0501036_0001689
592 Ga0501036_0008851
593 Ga0501036_0038043
594 Ga0501036_0115100
595 Ga0501036_0247726
596 Ga0501037_0001378
597 Ga0501037_0010342
598 Ga0501037_0036903
599 Ga0501037_0073111
600 Ga0501038_0000916
601 Ga0501038_0007062
602 Ga0501038_0051274
603 Ga0501038_0052058
604 Ga0501038_0074390
605 Ga0501039_0006441
606 Ga0501039_0013730
607 Ga0501039_0015194
608 Ga0501039_0042814
609 Ga0501040_0005076
610 Ga0501040_0008243
611 Ga0501040_0026658
612 Ga0501040_0030801
613 Ga0501041_0009022
614 Ga0501041_0015100
615 Ga0501041_0017007
616 Ga0501041_0028294
617 Ga0501042_0005775
618 Ga0501043_0001727
619 Ga0501043_0147313
620 Ga0501046_0002867
621 Ga0501046_0019551
622 Ga0501046_0108595
623 Ga0501047_0209483
624 Ga0501048_0001640
625 Ga0501048_0020986
626 Ga0501048_0054843
627 Ga0501068_0000438
628 Ga0501068_0008327
629 Ga0501068_0008421
630 Ga0501069_0004888
631 Ga0501069_0008503
632 Ga0501069_0013504
633 Ga0501070_0003417
634 Ga0501070_0006911
635 Ga0501070_0012899
636 Ga0501070_0013971
637 Ga0501070_0025125
638 Ga0501070_0033493
639 Ga0501071_0003327
640 Ga0501071_0006570
641 Ga0501071_0027619
642 Ga0501071_0130648
643 Ga0501072_0002110
644 Ga0501072_0003066
645 Ga0501072_0010586
646 Ga0501072_0012046
647 Ga0501072_0043442
648 Ga0501072_0118977
649 Ga0501073_0003893
650 Ga0501073_0004665
651 Ga0501073_0005502
652 Ga0501073_0009480
653 Ga0501073_0040694
654 Ga0501074_0000103
655 Ga0501074_0001434
656 Ga0501074_0020901
657 Ga0501074_0023525
658 Ga0501074_0054504
659 Ga0501075_0001950
660 Ga0501075_0020885
661 Ga0501076_0013095
662 Ga0501076_0023372
663 Ga0501076_0037991
664 Ga0501077_0000418
665 Ga0501077_0002167
666 Ga0501077_0010243
667 Ga0501077_0028550
668 Ga0501079_0001723
669 Ga0501079_0016513
670 Ga0501079_0017046
671 Ga0501079_0020809
672 Ga0501079_0021074
673 Ga0501080_0002194
674 Ga0501080_0006110
675 Ga0501080_0008123
676 Ga0501080_0014820
677 Ga0501080_0046885
678 Ga0501080_0129595
679 Ga0501081_0003425
680 Ga0501081_0006087
681 Ga0501081_0020577
682 Ga0501081_0033887
683 Ga0501083_0004548
684 Ga0501083_0017018
685 Ga0501083_0021659
686 Ga0501083_0065313
687 Ga0501035_0038504
688 Ga0501035_0046223
689 Ga0501044_0001922
690 Ga0501044_0005425
691 Ga0501044_0007960
692 Ga0501044_0008655
693 Ga0501045_0005141
694 Ga0501045_0007550
695 Ga0501045_0017017
696 nmdc:mga03683_22569_c1
697 nmdc:mga03n38_1091_c1
698 nmdc:mga00v17_3619_c1
699 nmdc:mga0yw44_36391_c1
700 nmdc:mga0yw44_544_c1
701 nmdc:mga05p37_1198_c1
702 nmdc:mga05p37_126701_c2
703 nmdc:mga05p37_221534_c1
704 nmdc:mga05p37_373_c1
705 nmdc:mga05p37_92294_c1
706 nmdc:mga05p37_99878_c1
707 nmdc:mga09592_52183_c1
708 nmdc:mga09592_8162_c1
709 nmdc:mga0qj67_1027_c1
710 nmdc:mga0qj67_6344_c1
711 nmdc:mga06r32_14278_c1
712 nmdc:mga06r32_22450_c1
713 nmdc:mga06r32_48210_c1
714 nmdc:mga08y16_115440_c1
715 nmdc:mga08y16_4896_c1
716 nmdc:mga0n895_5326_c1
717 nmdc:mga0rr50_105637_c1
718 nmdc:mga08x19_17374_c1
719 nmdc:mga0a205_21381_c1
720 Ga0495595_0001223
721 Ga0495619_0046887
722 Ga0495619_0055815
723 Ga0500566_0001601
724 Ga0500568_0000030
725 Ga0500616_0020247
726 Ga0501084_0000580
727 Ga0501084_0002043
728 Ga0501084_0004617
729 Ga0501084_0010895
730 Ga0501084_0020731
731 Ga0501084_0072296
732 Ga0501082_0001475
733 Ga0466962_0044898
734 Ga0530510_0011245
735 Ga0530510_0017023
736 Ga0530510_0067028
737 2517760122
738 2548692610
739 2552105437
740 2644517704
741 2738892326
742 2774396299
743 2791910487
744 2809197959
745 2812353351
746 2891969025
747 2919718161
748 8002780002
749 8002786472
750 8047715948

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13193

AMP-binding_C

AMP-binding enzyme C-terminal domain

436

510

0.95

PF01416

PseudoU_synth_1

tRNA pseudouridine synthase

493

565

0.85

PF00501

AMP-binding

AMP-binding enzyme

9

382

0.79

Structural Annotation

Top 5 Hits

ID Description Score Start End
5x8f-assembly1.cif.gz_A ternary complex structure of a double mutant i454ra456k of o-succinylbenzoate coa synthetase (mene) from bacillus subtilis bound with amp and its product analogue osb-ncoa at 1.76 angstrom 0.8956 8 521
3ivr-assembly1.cif.gz_B crystal structure of putative long-chain-fatty-acid coa ligase from rhodopseudomonas palustris cga009 0.8906 4 423
6h1b-assembly5.cif.gz_E structure of amide bond synthetase mcba k483a mutant from marinactinospora thermotolerans 0.8848 8 524
5bsv-assembly1.cif.gz_A crystal structure of 4-coumarate:coa ligase complexed with feruloyl adenylate 0.8843 4 523
2p2j-assembly1.cif.gz_A acetyl-coa synthetase, k609a mutation 0.8815 4 527
ID Description Score Start End Superfamily
af_P9WQ51_3_430_3.40.50.12780 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;ANL, N-terminal domain 0.9755 1 423 3.40.50.12780
3iplB02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9751 427 506 3.30.300.30
af_P9WQ51_434_541_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9695 427 534 3.30.300.30
af_Q2G2V3_396_492_3.30.300.30 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9689 427 522 3.30.300.30
5buqA02 Alpha Beta;2-Layer Sandwich;GMP Synthetase; Chain A, domain 3;ANL, C-terminal domain 0.9637 427 506 3.30.300.30
ID Description Score Start End GO Terms
AF-A0A120J379-F1-model_v4 deleted 0.9682 427 534
AF-A0A317K1Y5-F1-model_v4 Non-ribosomal peptide synthetase 0.9562 6 106 GO:0005829
GO:0008610
GO:0009239
GO:0009366
GO:0031177
GO:0043041
GO:0047527
AF-T0P079-F1-model_v4 deleted 0.9544 6 112
AF-Q0ULM4-F1-model_v4 AMP-dependent synthetase/ligase domain-containing protein 0.9541 9 107 GO:0016874
AF-A0A2M6YU64-F1-model_v4 Acetyl-coenzyme A synthetase 0.9518 27 137 GO:0003987
GO:0005829
GO:0006085

Map