F425988

General Info

Members Datasets Scaffolds Average Seq Length
372 183 744 185

Family's Representative Sequence

Representative Sequence 3300005563|Ga0068855_100660447|Ga0068855_1006604471
Length 204
Sequence MSNLVHPVNEHGGFMRNEDELIDRDRDTNELRVTDRRRIYLDDKGTEQANEEVEQPSLKPKYVEELESRTKAAEKQVQDVQTRFASADKAKFIAALLPAMDDLERAIDAVSGDAPREAMVEGIRRIASSFQSALSSAGVEPIAAVGEEFNPELHEAVDTAETTDDLDGRVIEEYSRGFRMGDRLLRPARVKVGRAGHRSQRESA

Samples

Sample ID Description Type Environment
1 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
2 2162886011 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
19 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
24 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
25 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
26 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
27 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
28 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
29 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
49 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
50 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
51 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
52 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
53 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
54 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
55 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
57 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
58 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
59 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
60 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
61 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
62 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
63 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
64 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
65 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
66 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
67 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
68 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
69 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
70 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
71 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
72 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
73 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
74 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
75 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
76 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
77 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
78 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
79 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
80 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
81 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
82 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
83 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
84 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
85 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
86 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
127 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
128 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
129 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
130 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
131 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
132 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
133 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
134 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
135 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
136 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
137 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
138 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
139 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
140 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
141 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
142 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
143 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
144 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
145 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
146 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
147 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
148 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
149 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
150 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
151 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
153 3300049652 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B1_A_0_drought Metagenome Rhizosphere
154 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
155 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
156 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
157 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
158 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
159 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
160 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
161 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
162 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
163 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
164 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
165 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
166 3300049682 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F11_B_3_drought Metagenome Rhizosphere
167 3300049683 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_B_3_control Metagenome Rhizosphere
168 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
169 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
170 3300049689 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - A15_A_4_drought Metagenome Rhizosphere
171 3300049704 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G2_A_2_control Metagenome Rhizosphere
172 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
173 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
174 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
175 3300049769 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_B_4_drought Metagenome Rhizosphere
176 3300049775 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_A_5_drought Metagenome Rhizosphere
177 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
178 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
182 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
183 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.08
Rhizosphere 98.66
Stem 0
Stem Tuber 0
Unclassified 16.13

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068855_100660447 3300005563 Bacteria 1122
2 MRS1b_contig_3050384 2162886011 Bacteria 1142
3 JGI24751J29686_10000104 3300002459 Bacteria 46525
4 JGI25406J46586_10000683 3300003203 Bacteria 15765
5 rootL2_10122771 3300003322 Bacteria 1635
6 Ga0065714_10064425 3300005288 Bacteria 189652
7 Ga0065704_10006025 3300005289 Bacteria 5614
8 Ga0065704_10120078 3300005289 Bacteria 1789
9 Ga0065704_10367694 3300005289 Unclassified 789
10 Ga0065712_10001505 3300005290 Bacteria 7032
11 Ga0065712_10003789 3300005290 Bacteria 4279
12 Ga0065712_10067727 3300005290 Bacteria 189643
13 Ga0065712_10145848 3300005290 Unclassified 1407
14 Ga0065715_10013317 3300005293 Bacteria 1902
15 Ga0065715_10088941 3300005293 Bacteria 22679
16 Ga0065715_10122709 3300005293 Bacteria 2197
17 Ga0065715_10371037 3300005293 Unclassified 921
18 Ga0065707_10002690 3300005295 Bacteria 4408
19 Ga0065707_10516771 3300005295 Bacteria 745
20 Ga0070670_100000159 3300005331 Bacteria 61313
21 Ga0070670_100069688 3300005331 Bacteria 3019
22 Ga0070670_100313178 3300005331 Bacteria 1374
23 Ga0070670_100479170 3300005331 Bacteria 1105
24 Ga0068869_100315080 3300005334 Bacteria 1267
25 Ga0068869_100645192 3300005334 Bacteria 898
26 Ga0070680_100204505 3300005336 Unclassified 1665
27 Ga0070682_100003756 3300005337 Bacteria 8440
28 Ga0070682_100061447 3300005337 Bacteria 2378
29 Ga0070689_100000508 3300005340 Bacteria 22987
30 Ga0070687_100085890 3300005343 Bacteria 1728
31 Ga0070692_10021428 3300005345 Bacteria 3143
32 Ga0070692_10054702 3300005345 Bacteria 2085
33 Ga0070692_10118824 3300005345 Bacteria 1471
34 Ga0070692_10166361 3300005345 Bacteria 1268
35 Ga0070669_100314954 3300005353 Bacteria 1262
36 Ga0070675_100573745 3300005354 Bacteria 1022
37 Ga0070671_100006772 3300005355 Bacteria 9167
38 Ga0070674_100933195 3300005356 Unclassified 758
39 Ga0070673_100005165 3300005364 Bacteria 8333
40 Ga0070673_100087769 3300005364 Bacteria 2536
41 Ga0070703_10033311 3300005406 Bacteria 1568
42 Ga0070701_10237402 3300005438 Bacteria 1095
43 Ga0070705_100003642 3300005440 Bacteria 7545
44 Ga0070705_100018555 3300005440 Bacteria 3648
45 Ga0070700_100000360 3300005441 Bacteria 23385
46 Ga0070700_100051084 3300005441 Bacteria 2573
47 Ga0070700_100065981 3300005441 Bacteria 2296
48 Ga0070700_100504776 3300005441 Unclassified 931
49 Ga0070700_100869333 3300005441 Unclassified 732
50 Ga0070694_100008712 3300005444 Bacteria 6212
51 Ga0070694_100015424 3300005444 Bacteria 4800
52 Ga0070694_100097389 3300005444 Bacteria 2075
53 Ga0070694_100114342 3300005444 Bacteria 1927
54 Ga0070694_100835463 3300005444 Unclassified 757
55 Ga0070708_100053557 3300005445 Bacteria 3580
56 Ga0070708_100731476 3300005445 Bacteria 931
57 Ga0070662_100668492 3300005457 Bacteria 877
58 Ga0070681_10000103 3300005458 Bacteria 63054
59 Ga0070681_10175395 3300005458 Bacteria 2065
60 Ga0068867_100150749 3300005459 Unclassified 1826
61 Ga0068867_100522681 3300005459 Bacteria 1023
62 Ga0068867_100608941 3300005459 Unclassified 953
63 Ga0070685_10656188 3300005466 Unclassified 761
64 Ga0070698_100006545 3300005471 Bacteria 12635
65 Ga0070698_100033893 3300005471 Bacteria 5289
66 Ga0070699_100308257 3300005518 Bacteria 1421
67 Ga0070679_100000610 3300005530 Bacteria 30442
68 Ga0070679_100143502 3300005530 Bacteria 2366
69 Ga0068853_100043276 3300005539 Bacteria 3852
70 Ga0068853_100163504 3300005539 Bacteria 2010
71 Ga0070686_100325030 3300005544 Unclassified 1148
72 Ga0070696_100091447 3300005546 Bacteria 2166
73 Ga0070696_100139270 3300005546 Bacteria 1772
74 Ga0070696_100306704 3300005546 Bacteria 1217
75 Ga0070696_100369490 3300005546 Bacteria 1115
76 Ga0070696_100924233 3300005546 Bacteria 725
77 Ga0070693_100002336 3300005547 Bacteria 8715
78 Ga0070693_100013678 3300005547 Bacteria 4140
79 Ga0070693_100103770 3300005547 Bacteria 1737
80 Ga0070704_100017295 3300005549 Bacteria 4583
81 Ga0070704_100052910 3300005549 Bacteria 2867
82 Ga0070704_100184867 3300005549 Bacteria 1670
83 Ga0070704_100268779 3300005549 Bacteria 1408
84 Ga0070704_100303142 3300005549 Bacteria 1332
85 Ga0068857_100118964 3300005577 Bacteria 2378
86 Ga0068857_100279417 3300005577 Bacteria 1536
87 Ga0068857_100720439 3300005577 Bacteria 949
88 Ga0068854_100214254 3300005578 Bacteria 1521
89 Ga0070702_100002800 3300005615 Bacteria 7637
90 Ga0070702_100026226 3300005615 Bacteria 3129
91 Ga0068852_100409130 3300005616 Bacteria 1336
92 Ga0068859_100001548 3300005617 Bacteria 23447
93 Ga0068859_100078108 3300005617 Bacteria 3350
94 Ga0068859_100106962 3300005617 Bacteria 2857
95 Ga0068859_100159893 3300005617 Bacteria 2332
96 Ga0068859_100313429 3300005617 Bacteria 1662
97 Ga0068859_100362574 3300005617 Bacteria 1544
98 Ga0068859_100367744 3300005617 Bacteria 1533
99 Ga0068859_101186798 3300005617 Unclassified 840
100 Ga0068859_101470269 3300005617 Unclassified 752
101 Ga0068864_100062358 3300005618 Bacteria 3230
102 Ga0068864_100140695 3300005618 Bacteria 2176
103 Ga0068864_100227531 3300005618 Bacteria 1723
104 Ga0068861_100013676 3300005719 Bacteria 5684
105 Ga0068851_10001433 3300005834 Bacteria 10437
106 Ga0068870_10090525 3300005840 Unclassified 1709
107 Ga0068863_100066806 3300005841 Bacteria 3401
108 Ga0068863_100168020 3300005841 Bacteria 2104
109 Ga0068863_100337963 3300005841 Bacteria 1465
110 Ga0068858_100142115 3300005842 Bacteria 2253
111 Ga0068858_100163188 3300005842 Bacteria 2098
112 Ga0068858_100394817 3300005842 Bacteria 1328
113 Ga0068860_100126222 3300005843 Bacteria 2452
114 Ga0068860_100272768 3300005843 Bacteria 1651
115 Ga0068860_100344385 3300005843 Unclassified 1466
116 Ga0068862_100058640 3300005844 Bacteria 3303
117 Ga0068862_100231841 3300005844 Bacteria 1675
118 Ga0068862_100251866 3300005844 Bacteria 1610
119 Ga0068862_100872871 3300005844 Unclassified 883
120 Ga0068862_101112203 3300005844 Unclassified 785
121 Ga0081539_10001384 3300005985 Bacteria 41854
122 Ga0081539_10004526 3300005985 Bacteria 15268
123 Ga0097621_100019380 3300006237 Bacteria 5220
124 Ga0097621_100574151 3300006237 Unclassified 1028
125 Ga0068871_100003999 3300006358 Bacteria 10201
126 Ga0075430_100091915 3300006846 Bacteria 2537
127 Ga0075431_100243936 3300006847 Bacteria 1827
128 Ga0075433_10008787 3300006852 Bacteria 8061
129 Ga0075433_10031963 3300006852 Bacteria 4504
130 Ga0075433_10034324 3300006852 Bacteria 4356
131 Ga0075433_10713412 3300006852 Unclassified 878
132 Ga0075433_10836439 3300006852 Unclassified 804
133 Ga0075434_100014349 3300006871 Bacteria 7573
134 Ga0075434_100032356 3300006871 Bacteria 5158
135 Ga0075434_100044407 3300006871 Bacteria 4409
136 Ga0075434_100092484 3300006871 Bacteria 3027
137 Ga0075429_100144984 3300006880 Bacteria 2078
138 Ga0097620_100001548 3300006931 Bacteria 23447
139 Ga0097620_100078108 3300006931 Bacteria 3350
140 Ga0097620_100106963 3300006931 Bacteria 2857
141 Ga0097620_100159893 3300006931 Bacteria 2332
142 Ga0097620_100313461 3300006931 Bacteria 1662
143 Ga0097620_100362573 3300006931 Bacteria 1544
144 Ga0097620_100367740 3300006931 Bacteria 1533
145 Ga0097620_101186757 3300006931 Unclassified 840
146 Ga0097620_101469649 3300006931 Unclassified 752
147 Ga0075435_100099330 3300007076 Bacteria 2410
148 Ga0075435_100178410 3300007076 Bacteria 1795
149 Ga0075435_100751987 3300007076 Unclassified 848
150 Ga0105240_10141147 3300009093 Bacteria 2880
151 Ga0105240_11396144 3300009093 Bacteria 736
152 Ga0111539_10007143 3300009094 Bacteria 14315
153 Ga0111539_10284323 3300009094 Bacteria 1925
154 Ga0111539_10646228 3300009094 Bacteria 1232
155 Ga0105247_10002148 3300009101 Bacteria 13615
156 Ga0114129_10016238 3300009147 Bacteria 10594
157 Ga0114129_10057582 3300009147 Bacteria 5437
158 Ga0114129_11303382 3300009147 Unclassified 900
159 Ga0114129_11390110 3300009147 Unclassified 866
160 Ga0114129_11556931 3300009147 Bacteria 811
161 Ga0105243_10418341 3300009148 Bacteria 1249
162 Ga0105243_10467359 3300009148 Bacteria 1187
163 Ga0105241_10063179 3300009174 Bacteria 2856
164 Ga0105241_10101479 3300009174 Bacteria 2288
165 Ga0105241_10224997 3300009174 Bacteria 1579
166 Ga0105241_10351474 3300009174 Bacteria 1280
167 Ga0105241_10483881 3300009174 Unclassified 1101
168 Ga0105241_10824766 3300009174 Unclassified 856
169 Ga0105248_10082286 3300009177 Bacteria 3620
170 Ga0105248_10332141 3300009177 Bacteria 1712
171 Ga0105248_10670461 3300009177 Bacteria 1170
172 Ga0105248_10876659 3300009177 Unclassified 1013
173 Ga0105237_10020724 3300009545 Bacteria 6771
174 Ga0105237_10249087 3300009545 Bacteria 1778
175 Ga0105238_10025668 3300009551 Bacteria 6007
176 Ga0105238_10294371 3300009551 Bacteria 1606
177 Ga0105249_10043583 3300009553 Bacteria 4080
178 Ga0105249_10055361 3300009553 Bacteria 3628
179 Ga0105249_10462013 3300009553 Bacteria 1309
180 Ga0105239_10392453 3300010375 Bacteria 1570
181 Ga0105239_10534738 3300010375 Bacteria 1334
182 Ga0105239_11193435 3300010375 Unclassified 877
183 Ga0105246_10055365 3300011119 Bacteria 2737
184 Ga0105246_10227861 3300011119 Bacteria 1465
185 Ga0105246_10255511 3300011119 Bacteria 1393
186 Ga0157373_10268660 3300013100 Bacteria 1207
187 Ga0157371_10093368 3300013102 Bacteria 2132
188 Ga0157374_11018042 3300013296 Unclassified 848
189 Ga0157378_10243988 3300013297 Bacteria 1717
190 Ga0157378_10495086 3300013297 Unclassified 1220
191 Ga0157378_10843417 3300013297 Bacteria 944
192 Ga0163162_10262986 3300013306 Bacteria 1857
193 Ga0163162_10730562 3300013306 Bacteria 1110
194 Ga0157372_10178870 3300013307 Bacteria 2455
195 Ga0157375_10011533 3300013308 Bacteria 7804
196 Ga0157375_10110835 3300013308 Bacteria 2842
197 Ga0163163_10002062 3300014325 Bacteria 16976
198 Ga0163163_10154793 3300014325 Bacteria 2336
199 Ga0163163_11226927 3300014325 Unclassified 812
200 Ga0157380_10061632 3300014326 Bacteria 3002
201 Ga0157380_10478823 3300014326 Unclassified 1203
202 Ga0157379_10027493 3300014968 Bacteria 5065
203 Ga0207656_10110426 3300025321 Bacteria 1270
204 Ga0207653_10002455 3300025885 Bacteria 5891
205 Ga0207710_10000680 3300025900 Bacteria 19152
206 Ga0207647_10002102 3300025904 Bacteria 15242
207 Ga0207647_10073615 3300025904 Bacteria 2058
208 Ga0207647_10122016 3300025904 Bacteria 1536
209 Ga0207645_10065284 3300025907 Bacteria 2326
210 Ga0207643_10016256 3300025908 Bacteria 4059
211 Ga0207643_10067834 3300025908 Bacteria 2048
212 Ga0207643_10327867 3300025908 Unclassified 957
213 Ga0207684_10029997 3300025910 Bacteria 4630
214 Ga0207654_10036539 3300025911 Bacteria 2745
215 Ga0207654_10403475 3300025911 Bacteria 951
216 Ga0207707_10000033 3300025912 Bacteria 158362
217 Ga0207695_10090766 3300025913 Bacteria 3070
218 Ga0207695_10393158 3300025913 Bacteria 1271
219 Ga0207671_10003336 3300025914 Bacteria 16127
220 Ga0207671_10370784 3300025914 Bacteria 1137
221 Ga0207660_10001124 3300025917 Bacteria 17908
222 Ga0207662_10119532 3300025918 Bacteria 1651
223 Ga0207652_10000032 3300025921 Bacteria 143319
224 Ga0207652_10114977 3300025921 Bacteria 2390
225 Ga0207646_10302431 3300025922 Bacteria 1445
226 Ga0207694_10026080 3300025924 Bacteria 4444
227 Ga0207694_10358980 3300025924 Bacteria 1207
228 Ga0207650_10000007 3300025925 Bacteria 530810
229 Ga0207650_10247773 3300025925 Bacteria 1441
230 Ga0207659_10229603 3300025926 Bacteria 1496
231 Ga0207659_10300759 3300025926 Bacteria 1318
232 Ga0207706_10243817 3300025933 Bacteria 1571
233 Ga0207686_10587269 3300025934 Unclassified 875
234 Ga0207670_10005884 3300025936 Bacteria 6766
235 Ga0207704_10644747 3300025938 Unclassified 872
236 Ga0207665_10413333 3300025939 Bacteria 1029
237 Ga0207711_10010840 3300025941 Bacteria 7577
238 Ga0207711_10186984 3300025941 Bacteria 1886
239 Ga0207711_10908532 3300025941 Unclassified 818
240 Ga0207689_10157745 3300025942 Unclassified 1870
241 Ga0207689_10198253 3300025942 Bacteria 1657
242 Ga0207689_10415079 3300025942 Unclassified 1123
243 Ga0207689_10443690 3300025942 Bacteria 1084
244 Ga0207689_10589313 3300025942 Bacteria 935
245 Ga0207679_10713396 3300025945 Bacteria 911
246 Ga0207667_10610579 3300025949 Bacteria 1099
247 Ga0207651_10015922 3300025960 Bacteria 4387
248 Ga0207651_10408503 3300025960 Bacteria 1156
249 Ga0207712_10015596 3300025961 Bacteria 4906
250 Ga0207712_11140138 3300025961 Unclassified 695
251 Ga0207640_10048438 3300025981 Bacteria 2747
252 Ga0207640_10593464 3300025981 Unclassified 937
253 Ga0207703_10166005 3300026035 Bacteria 1937
254 Ga0207703_10189138 3300026035 Bacteria 1822
255 Ga0207639_10033986 3300026041 Bacteria 3765
256 Ga0207639_10382410 3300026041 Bacteria 1264
257 Ga0207708_10000825 3300026075 Bacteria 23369
258 Ga0207708_10008818 3300026075 Bacteria 7462
259 Ga0207708_10076137 3300026075 Bacteria 2574
260 Ga0207708_10138191 3300026075 Bacteria 1909
261 Ga0207708_10815402 3300026075 Unclassified 804
262 Ga0207702_10052383 3300026078 Bacteria 3453
263 Ga0207702_10845257 3300026078 Bacteria 906
264 Ga0207641_10207443 3300026088 Bacteria 1810
265 Ga0207641_10306045 3300026088 Bacteria 1503
266 Ga0207648_10050464 3300026089 Bacteria 3638
267 Ga0207648_10058800 3300026089 Bacteria 3352
268 Ga0207648_10108864 3300026089 Bacteria 2432
269 Ga0207648_10404044 3300026089 Bacteria 1238
270 Ga0207648_10434913 3300026089 Bacteria 1193
271 Ga0207675_100030678 3300026118 Bacteria 5007
272 Ga0207675_100228315 3300026118 Bacteria 1795
273 Ga0207675_100465888 3300026118 Unclassified 1254
274 Ga0207698_10284555 3300026142 Bacteria 1531
275 Ga0268265_10491295 3300028380 Bacteria 1155
276 Ga0268264_10032699 3300028381 Bacteria 4269
277 Ga0268264_10053995 3300028381 Bacteria 3354
278 Ga0268264_10058772 3300028381 Bacteria 3221
279 Ga0307408_100067779 3300031548 Bacteria 2625
280 Ga0307408_100261120 3300031548 Unclassified 1433
281 Ga0307408_100408349 3300031548 Bacteria 1168
282 Ga0307408_100585669 3300031548 Unclassified 989
283 Ga0307405_10023307 3300031731 Bacteria 3516
284 Ga0307405_10097642 3300031731 Bacteria 1962
285 Ga0307413_10015324 3300031824 Bacteria 3925
286 Ga0307410_10029326 3300031852 Bacteria 3503
287 Ga0307410_10275017 3300031852 Unclassified 1319
288 Ga0307410_10468392 3300031852 Bacteria 1031
289 Ga0307406_10005204 3300031901 Bacteria 7106
290 Ga0307406_10218883 3300031901 Bacteria 1414
291 Ga0307406_10509583 3300031901 Unclassified 977
292 Ga0307407_10120515 3300031903 Bacteria 1662
293 Ga0307412_10013755 3300031911 Bacteria 4754
294 Ga0307409_100039288 3300031995 Bacteria 3510
295 Ga0307416_100012311 3300032002 Bacteria 5758
296 Ga0307416_100016594 3300032002 Bacteria 5125
297 Ga0307416_100407489 3300032002 Bacteria 1399
298 Ga0307416_100522055 3300032002 Bacteria 1256
299 Ga0307416_101072518 3300032002 Unclassified 910
300 Ga0307414_10002466 3300032004 Bacteria 9697
301 Ga0307411_10067914 3300032005 Bacteria 2401
302 Ga0307411_10082716 3300032005 Bacteria 2215
303 Ga0307411_10104182 3300032005 Bacteria 2014
304 Ga0307415_100003204 3300032126 Bacteria 8302
305 Ga0307415_100908234 3300032126 Unclassified 812
306 Ga0373951_0018680 3300035091 Bacteria 1576
307 Ga0395898_0071145 3300037466 Bacteria 3362
308 Ga0395898_0148537 3300037466 Bacteria 2243
309 Ga0395901_0103285 3300038443 Bacteria 2991
310 Ga0242420_012540 3300038996 Unclassified 1436
311 Ga0451577_0230844 3300042876 Bacteria 1674
312 Ga0451576_0067007 3300045051 Bacteria 3737
313 Ga0496102_0033938 3300048905 Bacteria 4588
314 Ga0496107_0018870 3300048910 Bacteria 4862
315 Ga0496109_0672556 3300048912 Bacteria 973
316 Ga0496113_0114786 3300048916 Bacteria 2100
317 Ga0501294_022714 3300049517 Bacteria 689
318 Ga0501298_002754 3300049521 Bacteria 2685
319 Ga0501299_008009 3300049522 Bacteria 1707
320 Ga0501038_0001836 3300049574 Bacteria 19637
321 Ga0501198_001678 3300049649 Bacteria 2925
322 Ga0501202_022587 3300049652 Unclassified 1264
323 Ga0501216_002228 3300049660 Bacteria 2726
324 Ga0501216_025861 3300049660 Unclassified 1056
325 Ga0501217_001734 3300049661 Bacteria 4162
326 Ga0501217_001958 3300049661 Bacteria 3961
327 Ga0501217_012218 3300049661 Bacteria 1909
328 Ga0501223_002051 3300049663 Bacteria 4522
329 Ga0501224_000877 3300049664 Bacteria 3872
330 Ga0501224_005015 3300049664 Bacteria 1887
331 Ga0501227_001080 3300049665 Bacteria 6056
332 Ga0501227_006411 3300049665 Bacteria 2529
333 Ga0501233_009690 3300049668 Bacteria 1883
334 Ga0501233_128496 3300049668 Bacteria 690
335 Ga0501235_000552 3300049669 Bacteria 7491
336 Ga0501236_007945 3300049670 Bacteria 1337
337 Ga0501239_001808 3300049672 Bacteria 1883
338 Ga0501240_013294 3300049673 Unclassified 1140
339 Ga0501243_031619 3300049675 Bacteria 905
340 Ga0501249_021330 3300049679 Unclassified 1413
341 Ga0501252_014852 3300049682 Bacteria 967
342 Ga0501253_002837 3300049683 Bacteria 2002
343 Ga0501257_004433 3300049686 Bacteria 3068
344 Ga0501257_007509 3300049686 Bacteria 2437
345 Ga0501259_050098 3300049688 Bacteria 845
346 Ga0501260_015886 3300049689 Unclassified 789
347 Ga0501221_026032 3300049704 Bacteria 1186
348 Ga0501225_0002093 3300049705 Bacteria 6210
349 Ga0501225_0044290 3300049705 Bacteria 1230
350 Ga0501241_033709 3300049758 Unclassified 974
351 Ga0501262_010789 3300049759 Bacteria 1147
352 Ga0501272_009257 3300049769 Unclassified 1088
353 Ga0501272_013505 3300049769 Bacteria 936
354 Ga0501279_029307 3300049775 Bacteria 812
355 Ga0501226_002624 3300049853 Bacteria 2182
356 nmdc:mga05p37_745564_c1 3300050507 Unclassified 1080
357 nmdc:mga05p37_80065_c1 3300050507 Bacteria 4023
358 nmdc:mga05p37_87487_c1 3300050507 Bacteria 3840
359 nmdc:mga06r32_266379_c1 3300050510 Bacteria 1701
360 nmdc:mga06r32_84583_c1 3300050510 Bacteria 3092
361 nmdc:mga08y16_6272_c1 3300050511 Bacteria 12465
362 nmdc:mga08y16_940479_c1 3300050511 Unclassified 848
363 nmdc:mga0n895_12134_c1 3300050512 Bacteria 7712
364 nmdc:mga0n895_253232_c1 3300050512 Bacteria 1787
365 nmdc:mga0n895_44260_c1 3300050512 Bacteria 4341
366 nmdc:mga0rr50_74060_c1 3300050513 Bacteria 2605
367 nmdc:mga0a205_11485_c1 3300050515 Bacteria 8156
368 nmdc:mga0a205_129142_c1 3300050515 Bacteria 2428
369 nmdc:mga0a205_245232_c1 3300050515 Bacteria 1672
370 nmdc:mga0a205_32218_c1 3300050515 Bacteria 5025
371 nmdc:mga0a205_5277_c1 3300050515 Bacteria 11636
372 nmdc:mga0a205_7270_c1 3300050515 Bacteria 7933
373 Ga0068855_100660447
374 MRS1b_contig_3050384
375 JGI24751J29686_10000104
376 JGI25406J46586_10000683
377 rootL2_10122771
378 Ga0065714_10064425
379 Ga0065704_10006025
380 Ga0065704_10120078
381 Ga0065704_10367694
382 Ga0065712_10001505
383 Ga0065712_10003789
384 Ga0065712_10067727
385 Ga0065712_10145848
386 Ga0065715_10013317
387 Ga0065715_10088941
388 Ga0065715_10122709
389 Ga0065715_10371037
390 Ga0065707_10002690
391 Ga0065707_10516771
392 Ga0070670_100000159
393 Ga0070670_100069688
394 Ga0070670_100313178
395 Ga0070670_100479170
396 Ga0068869_100315080
397 Ga0068869_100645192
398 Ga0070680_100204505
399 Ga0070682_100003756
400 Ga0070682_100061447
401 Ga0070689_100000508
402 Ga0070687_100085890
403 Ga0070692_10021428
404 Ga0070692_10054702
405 Ga0070692_10118824
406 Ga0070692_10166361
407 Ga0070669_100314954
408 Ga0070675_100573745
409 Ga0070671_100006772
410 Ga0070674_100933195
411 Ga0070673_100005165
412 Ga0070673_100087769
413 Ga0070703_10033311
414 Ga0070701_10237402
415 Ga0070705_100003642
416 Ga0070705_100018555
417 Ga0070700_100000360
418 Ga0070700_100051084
419 Ga0070700_100065981
420 Ga0070700_100504776
421 Ga0070700_100869333
422 Ga0070694_100008712
423 Ga0070694_100015424
424 Ga0070694_100097389
425 Ga0070694_100114342
426 Ga0070694_100835463
427 Ga0070708_100053557
428 Ga0070708_100731476
429 Ga0070662_100668492
430 Ga0070681_10000103
431 Ga0070681_10175395
432 Ga0068867_100150749
433 Ga0068867_100522681
434 Ga0068867_100608941
435 Ga0070685_10656188
436 Ga0070698_100006545
437 Ga0070698_100033893
438 Ga0070699_100308257
439 Ga0070679_100000610
440 Ga0070679_100143502
441 Ga0068853_100043276
442 Ga0068853_100163504
443 Ga0070686_100325030
444 Ga0070696_100091447
445 Ga0070696_100139270
446 Ga0070696_100306704
447 Ga0070696_100369490
448 Ga0070696_100924233
449 Ga0070693_100002336
450 Ga0070693_100013678
451 Ga0070693_100103770
452 Ga0070704_100017295
453 Ga0070704_100052910
454 Ga0070704_100184867
455 Ga0070704_100268779
456 Ga0070704_100303142
457 Ga0068857_100118964
458 Ga0068857_100279417
459 Ga0068857_100720439
460 Ga0068854_100214254
461 Ga0070702_100002800
462 Ga0070702_100026226
463 Ga0068852_100409130
464 Ga0068859_100001548
465 Ga0068859_100078108
466 Ga0068859_100106962
467 Ga0068859_100159893
468 Ga0068859_100313429
469 Ga0068859_100362574
470 Ga0068859_100367744
471 Ga0068859_101186798
472 Ga0068859_101470269
473 Ga0068864_100062358
474 Ga0068864_100140695
475 Ga0068864_100227531
476 Ga0068861_100013676
477 Ga0068851_10001433
478 Ga0068870_10090525
479 Ga0068863_100066806
480 Ga0068863_100168020
481 Ga0068863_100337963
482 Ga0068858_100142115
483 Ga0068858_100163188
484 Ga0068858_100394817
485 Ga0068860_100126222
486 Ga0068860_100272768
487 Ga0068860_100344385
488 Ga0068862_100058640
489 Ga0068862_100231841
490 Ga0068862_100251866
491 Ga0068862_100872871
492 Ga0068862_101112203
493 Ga0081539_10001384
494 Ga0081539_10004526
495 Ga0097621_100019380
496 Ga0097621_100574151
497 Ga0068871_100003999
498 Ga0075430_100091915
499 Ga0075431_100243936
500 Ga0075433_10008787
501 Ga0075433_10031963
502 Ga0075433_10034324
503 Ga0075433_10713412
504 Ga0075433_10836439
505 Ga0075434_100014349
506 Ga0075434_100032356
507 Ga0075434_100044407
508 Ga0075434_100092484
509 Ga0075429_100144984
510 Ga0097620_100001548
511 Ga0097620_100078108
512 Ga0097620_100106963
513 Ga0097620_100159893
514 Ga0097620_100313461
515 Ga0097620_100362573
516 Ga0097620_100367740
517 Ga0097620_101186757
518 Ga0097620_101469649
519 Ga0075435_100099330
520 Ga0075435_100178410
521 Ga0075435_100751987
522 Ga0105240_10141147
523 Ga0105240_11396144
524 Ga0111539_10007143
525 Ga0111539_10284323
526 Ga0111539_10646228
527 Ga0105247_10002148
528 Ga0114129_10016238
529 Ga0114129_10057582
530 Ga0114129_11303382
531 Ga0114129_11390110
532 Ga0114129_11556931
533 Ga0105243_10418341
534 Ga0105243_10467359
535 Ga0105241_10063179
536 Ga0105241_10101479
537 Ga0105241_10224997
538 Ga0105241_10351474
539 Ga0105241_10483881
540 Ga0105241_10824766
541 Ga0105248_10082286
542 Ga0105248_10332141
543 Ga0105248_10670461
544 Ga0105248_10876659
545 Ga0105237_10020724
546 Ga0105237_10249087
547 Ga0105238_10025668
548 Ga0105238_10294371
549 Ga0105249_10043583
550 Ga0105249_10055361
551 Ga0105249_10462013
552 Ga0105239_10392453
553 Ga0105239_10534738
554 Ga0105239_11193435
555 Ga0105246_10055365
556 Ga0105246_10227861
557 Ga0105246_10255511
558 Ga0157373_10268660
559 Ga0157371_10093368
560 Ga0157374_11018042
561 Ga0157378_10243988
562 Ga0157378_10495086
563 Ga0157378_10843417
564 Ga0163162_10262986
565 Ga0163162_10730562
566 Ga0157372_10178870
567 Ga0157375_10011533
568 Ga0157375_10110835
569 Ga0163163_10002062
570 Ga0163163_10154793
571 Ga0163163_11226927
572 Ga0157380_10061632
573 Ga0157380_10478823
574 Ga0157379_10027493
575 Ga0207656_10110426
576 Ga0207653_10002455
577 Ga0207710_10000680
578 Ga0207647_10002102
579 Ga0207647_10073615
580 Ga0207647_10122016
581 Ga0207645_10065284
582 Ga0207643_10016256
583 Ga0207643_10067834
584 Ga0207643_10327867
585 Ga0207684_10029997
586 Ga0207654_10036539
587 Ga0207654_10403475
588 Ga0207707_10000033
589 Ga0207695_10090766
590 Ga0207695_10393158
591 Ga0207671_10003336
592 Ga0207671_10370784
593 Ga0207660_10001124
594 Ga0207662_10119532
595 Ga0207652_10000032
596 Ga0207652_10114977
597 Ga0207646_10302431
598 Ga0207694_10026080
599 Ga0207694_10358980
600 Ga0207650_10000007
601 Ga0207650_10247773
602 Ga0207659_10229603
603 Ga0207659_10300759
604 Ga0207706_10243817
605 Ga0207686_10587269
606 Ga0207670_10005884
607 Ga0207704_10644747
608 Ga0207665_10413333
609 Ga0207711_10010840
610 Ga0207711_10186984
611 Ga0207711_10908532
612 Ga0207689_10157745
613 Ga0207689_10198253
614 Ga0207689_10415079
615 Ga0207689_10443690
616 Ga0207689_10589313
617 Ga0207679_10713396
618 Ga0207667_10610579
619 Ga0207651_10015922
620 Ga0207651_10408503
621 Ga0207712_10015596
622 Ga0207712_11140138
623 Ga0207640_10048438
624 Ga0207640_10593464
625 Ga0207703_10166005
626 Ga0207703_10189138
627 Ga0207639_10033986
628 Ga0207639_10382410
629 Ga0207708_10000825
630 Ga0207708_10008818
631 Ga0207708_10076137
632 Ga0207708_10138191
633 Ga0207708_10815402
634 Ga0207702_10052383
635 Ga0207702_10845257
636 Ga0207641_10207443
637 Ga0207641_10306045
638 Ga0207648_10050464
639 Ga0207648_10058800
640 Ga0207648_10108864
641 Ga0207648_10404044
642 Ga0207648_10434913
643 Ga0207675_100030678
644 Ga0207675_100228315
645 Ga0207675_100465888
646 Ga0207698_10284555
647 Ga0268265_10491295
648 Ga0268264_10032699
649 Ga0268264_10053995
650 Ga0268264_10058772
651 Ga0307408_100067779
652 Ga0307408_100261120
653 Ga0307408_100408349
654 Ga0307408_100585669
655 Ga0307405_10023307
656 Ga0307405_10097642
657 Ga0307413_10015324
658 Ga0307410_10029326
659 Ga0307410_10275017
660 Ga0307410_10468392
661 Ga0307406_10005204
662 Ga0307406_10218883
663 Ga0307406_10509583
664 Ga0307407_10120515
665 Ga0307412_10013755
666 Ga0307409_100039288
667 Ga0307416_100012311
668 Ga0307416_100016594
669 Ga0307416_100407489
670 Ga0307416_100522055
671 Ga0307416_101072518
672 Ga0307414_10002466
673 Ga0307411_10067914
674 Ga0307411_10082716
675 Ga0307411_10104182
676 Ga0307415_100003204
677 Ga0307415_100908234
678 Ga0373951_0018680
679 Ga0395898_0071145
680 Ga0395898_0148537
681 Ga0395901_0103285
682 Ga0242420_012540
683 Ga0451577_0230844
684 Ga0451576_0067007
685 Ga0496102_0033938
686 Ga0496107_0018870
687 Ga0496109_0672556
688 Ga0496113_0114786
689 Ga0501294_022714
690 Ga0501298_002754
691 Ga0501299_008009
692 Ga0501038_0001836
693 Ga0501198_001678
694 Ga0501202_022587
695 Ga0501216_002228
696 Ga0501216_025861
697 Ga0501217_001734
698 Ga0501217_001958
699 Ga0501217_012218
700 Ga0501223_002051
701 Ga0501224_000877
702 Ga0501224_005015
703 Ga0501227_001080
704 Ga0501227_006411
705 Ga0501233_009690
706 Ga0501233_128496
707 Ga0501235_000552
708 Ga0501236_007945
709 Ga0501239_001808
710 Ga0501240_013294
711 Ga0501243_031619
712 Ga0501249_021330
713 Ga0501252_014852
714 Ga0501253_002837
715 Ga0501257_004433
716 Ga0501257_007509
717 Ga0501259_050098
718 Ga0501260_015886
719 Ga0501221_026032
720 Ga0501225_0002093
721 Ga0501225_0044290
722 Ga0501241_033709
723 Ga0501262_010789
724 Ga0501272_009257
725 Ga0501272_013505
726 Ga0501279_029307
727 Ga0501226_002624
728 nmdc:mga05p37_745564_c1
729 nmdc:mga05p37_80065_c1
730 nmdc:mga05p37_87487_c1
731 nmdc:mga06r32_266379_c1
732 nmdc:mga06r32_84583_c1
733 nmdc:mga08y16_6272_c1
734 nmdc:mga08y16_940479_c1
735 nmdc:mga0n895_12134_c1
736 nmdc:mga0n895_253232_c1
737 nmdc:mga0n895_44260_c1
738 nmdc:mga0rr50_74060_c1
739 nmdc:mga0a205_11485_c1
740 nmdc:mga0a205_129142_c1
741 nmdc:mga0a205_245232_c1
742 nmdc:mga0a205_32218_c1
743 nmdc:mga0a205_5277_c1
744 nmdc:mga0a205_7270_c1

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01025

GrpE

GrpE

33

194

0.81

Structural Annotation

Top 5 Hits

ID Description Score Start End
3aai-assembly1.cif.gz_A x-ray crystal structure of csor from thermus thermophilus hb8 0.902 71 115
3aai-assembly1.cif.gz_C x-ray crystal structure of csor from thermus thermophilus hb8 0.9009 71 115
3cra-assembly1.cif.gz_B crystal structure of escherichia coli mazg, the regulator of nutritional stress response 0.8765 73 120
2qup-assembly1.cif.gz_A crystal structure of uncharacterized protein bh1478 from bacillus halodurans 0.8331 71 115
6dlm-assembly1.cif.gz_B dhd127 0.8174 67 119
ID Description Score Start End Superfamily
af_A0A0P0VLJ4_201_256_2.30.22.10 Mainly Beta;Roll;Nucleotide Exchange Factor Grpe; Chain A, domain 2;Head domain of nucleotide exchange factor GrpE 0.9639 120 174 2.30.22.10
af_Q2FXZ1_152_207_2.30.22.10 Mainly Beta;Roll;Nucleotide Exchange Factor Grpe; Chain A, domain 2;Head domain of nucleotide exchange factor GrpE 0.9507 120 174 2.30.22.10
af_Q99LP6_159_215_2.30.22.10 Mainly Beta;Roll;Nucleotide Exchange Factor Grpe; Chain A, domain 2;Head domain of nucleotide exchange factor GrpE 0.9372 120 176 2.30.22.10
af_A0A0P0VLJ4_201_256_2.30.22.10 Mainly Beta;Roll;Nucleotide Exchange Factor Grpe; Chain A, domain 2;Head domain of nucleotide exchange factor GrpE 0.9307 120 174 2.30.22.10
af_Q18421_178_235_2.30.22.10 Mainly Beta;Roll;Nucleotide Exchange Factor Grpe; Chain A, domain 2;Head domain of nucleotide exchange factor GrpE 0.9267 120 174 2.30.22.10
ID Description Score Start End GO Terms
AF-A0A0D0AGK6-F1-model_v4 GrpE protein homolog 0.9524 109 178 GO:0000774
GO:0001405
GO:0006457
GO:0030150
GO:0042803
GO:0051082
GO:0051087
AF-A0A354HS42-F1-model_v4 Protein GrpE 0.9386 104 181 GO:0000774
GO:0006457
GO:0042803
GO:0051082
GO:0051087
AF-T1CHM8-F1-model_v4 GrpE protein 0.9154 95 181 GO:0000774
GO:0006457
GO:0042803
GO:0051082
GO:0051087
AF-A0A2J7ZS86-F1-model_v4 Protein GrpE 0.9097 108 184 GO:0000774
GO:0006457
GO:0042803
GO:0051082
GO:0051087
AF-A0A354HS42-F1-model_v4 Protein GrpE 0.9049 104 181 GO:0000774
GO:0006457
GO:0042803
GO:0051082
GO:0051087

Map