F425406

General Info

Members Datasets Scaffolds Average Seq Length
370 226 740 425

Family's Representative Sequence

Representative Sequence 3300015261|Ga0182006_1031232|Ga0182006_10312322
Length 438
Sequence VSAAPSPAGKAPARKRSAVRWMIVGLIAVATVINYIDRNALAVMWPAISQDIGATKEDYALLVTIFMLFYAAGQFVFGRLFDIIGTRMGFALSIAVWSISIALHAVTHSITSFSIVRAMLGISEAGAWPGAVKANAEWFPARERALAQGIFNAGASIGAIVSAPLIALLFLWLGWKGTFVLVGTLGFVWLLPWLVIYRAGPDRHPWVDAAERALILDAPTDGSVPDKPAYLPSLRQIMSHRQSWGIVLARFFIDPIWWLFVSWLPIYLAETFHFDIKQIGAFAWVPFVGAMLGSLSGGWLSGRLIAAGWSVDRARKWTITLGGAIMAPALLGAVLAADPTIAVLTIAAVLFGFQIAIGNIQTLPGDLFDGKSVGSLAGIGGMAAVAGTLITTWLVPVMTAHSYAPMFILVAALVPASLAALWLVTGRIHKLDAHPARD

Samples

Sample ID Description Type Environment
1 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
8 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
9 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
10 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
11 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
12 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
13 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
14 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
15 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
16 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
17 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
21 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
22 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
23 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
24 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
25 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
26 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
27 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
28 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
29 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
30 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
31 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
32 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
33 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
34 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
35 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
36 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
37 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
38 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
39 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
40 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
41 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
42 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
43 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
44 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
45 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
46 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
47 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
48 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
49 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
51 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
57 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
59 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
60 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
61 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
62 3300031838 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 25_EM Metagenome Unclassified
63 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
64 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
65 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
66 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
67 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
68 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
69 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
70 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
71 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
72 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
73 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
74 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
75 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
76 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
77 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
78 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
79 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
80 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
81 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
82 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
83 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
84 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
85 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
86 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
87 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
88 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
89 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
90 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
91 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
92 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
93 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
94 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
95 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
96 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
97 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
98 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
99 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
100 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
101 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
102 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
103 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
104 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
105 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
106 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
107 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
108 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
109 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
110 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
111 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
112 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
113 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
114 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
115 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
116 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
117 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
118 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
119 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
120 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
121 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
122 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
123 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
124 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
125 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
126 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
127 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
128 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
129 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
130 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
131 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
132 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
133 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
134 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
135 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
136 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
137 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
138 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
139 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
140 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
141 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
142 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
147 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
148 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
149 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
150 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
151 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
152 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
153 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
154 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
155 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
156 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
157 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
158 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
159 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
160 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
161 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
162 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
163 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
164 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
165 2524023250 Niveispirillum irakense DSM 11586 Isolate Unclassified
166 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
167 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
168 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
169 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
170 2643221556 Massilia sp. Root1485 Isolate Unclassified
171 2643221563 Sphingopyxis sp. Root154 Isolate Unclassified
172 2643221583 Caulobacter sp. Root655 Isolate Unclassified
173 2643221608 Sphingopyxis sp. Root214 Isolate Unclassified
174 2643221622 Sphingomonas sp. Root241 Isolate Unclassified
175 2643221640 Caulobacter sp. Root342 Isolate Unclassified
176 2643221642 Caulobacter sp. Root343 Isolate Unclassified
177 2643221645 Massilia sp. Root351 Isolate Unclassified
178 2643221664 Massilia sp. Root418 Isolate Unclassified
179 2643221684 Massilia sp. Root133 Isolate Unclassified
180 2738541280 Massilia sp. GV090 Isolate Unclassified
181 2738541300 Massilia sp. GV016 Isolate Unclassified
182 2738543018 Massilia sp. GV045 Isolate Unclassified
183 2738543030 Massilia sp. GV097 Isolate Unclassified
184 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
185 2747842428 Stenotrophomonas sp. WCS2014-113 Isolate Unclassified
186 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
187 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
188 2818991438 Novosphingobium barchaimii 1192 Isolate Unclassified
189 2818991457 Xanthomonas translucens 569 Isolate Unclassified
190 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
191 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
192 2842780639 Pseudoxanthomonas sp. R-71986 Isolate Unclassified
193 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
194 2849560528 Caulobacter zeae 410 Isolate Unclassified
195 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
196 2851153111 Caulobacter radicis 736 Isolate Unclassified
197 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
198 2852653556 Sphingopyxis sp. JAI108 Isolate Rhizosphere
199 2852680915 Sphingopyxis sp. JAI128 Isolate Rhizosphere
200 2852684882 Xanthomonas sp. JAI131 Isolate Rhizosphere
201 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
202 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
203 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
204 2894414249 Luteimonas sp. LNNU 24178 Isolate Rhizosphere
205 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
206 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
207 2919130084 Xanthomonas sp. 1678 Isolate Rhizosphere
208 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
209 2919476304 Duganella sp. 3397 Isolate Unclassified
210 2919513703 Luteimonas sp. 3794 Isolate Unclassified
211 2919675420 Luteimonas terrae 4099 Isolate Unclassified
212 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
213 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
214 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
215 2929195423 Xanthomonas sp. R-73098 Hybrid assembly Isolate Unclassified
216 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
217 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
218 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
219 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
220 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
221 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
222 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
223 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
224 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
225 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
226 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 83.24
Metatranscriptomes 0
Isolates 16.76

Biome Distribution

Category Percentage (%)
Aerial Root 0.27
Bulb 0
Endosphere 24.05
Nodule 0.81
Rhizoplane 0.81
Rhizosphere 51.89
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0182006_1031232 3300015261 Bacteria 2148
2 SwRhRL2b_contig_267781 2162886007 Bacteria 4549
3 SwRhRL2b_contig_407547 2162886007 Bacteria 2419
4 JGI25150J39212_1000798 3300002774 Bacteria 10720
5 JGI25153J46596_10000027 3300003215 Bacteria 210760
6 rootH2_10005730 3300003320 Bacteria 6693
7 Ga0055526_1000312 3300003771 Bacteria 40506
8 Ga0055526_1001321 3300003771 Bacteria 17733
9 Ga0055537_1000299 3300003773 Bacteria 34588
10 Ga0055524_1000010 3300003775 Bacteria 282893
11 Ga0055536_1000178 3300003781 Bacteria 52568
12 Ga0055536_1000344 3300003781 Bacteria 34426
13 Ga0055536_1000885 3300003781 Bacteria 19488
14 Ga0055536_1006029 3300003781 Bacteria 5753
15 Ga0055536_1007978 3300003781 Bacteria 4635
16 Ga0055534_1000162 3300003784 Bacteria 50051
17 Ga0055534_1006932 3300003784 Bacteria 2781
18 Ga0055528_1000194 3300003790 Bacteria 51826
19 Ga0055530_10000206 3300003791 Bacteria 53468
20 Ga0055530_10008915 3300003791 Bacteria 3937
21 Ga0055530_10010089 3300003791 Bacteria 3541
22 Ga0055540_1001052 3300003792 Bacteria 17586
23 Ga0055540_1006233 3300003792 Bacteria 4788
24 Ga0055531_10000395 3300003794 Bacteria 41932
25 Ga0055531_10000526 3300003794 Bacteria 34418
26 Ga0055531_10015265 3300003794 Bacteria 3398
27 Ga0055531_10021309 3300003794 Bacteria 2519
28 Ga0055531_10021329 3300003794 Bacteria 2517
29 Ga0065165_1005298 3300005262 Bacteria 7343
30 Ga0065704_10074011 3300005289 Bacteria 6601
31 Ga0065704_10075313 3300005289 Bacteria 5665
32 Ga0065707_10004245 3300005295 Bacteria 4531
33 Ga0070670_100006596 3300005331 Bacteria 9837
34 Ga0081539_10000938 3300005985 Bacteria 54684
35 Ga0075363_100016431 3300006048 Bacteria 3655
36 Ga0075364_10000319 3300006051 Bacteria 23673
37 Ga0075367_10015709 3300006178 Bacteria 4121
38 Ga0075369_10038829 3300006186 Bacteria 2032
39 Ga0075366_10005096 3300006195 Bacteria 7105
40 Ga0075428_100029472 3300006844 Bacteria 6073
41 Ga0075428_100092791 3300006844 Bacteria 3291
42 Ga0075429_100064233 3300006880 Bacteria 3197
43 Ga0075429_100249833 3300006880 Bacteria 1553
44 Ga0099826_10000002 3300006948 Bacteria 1125830
45 Ga0105251_10004939 3300009011 Bacteria 8882
46 Ga0105244_10009561 3300009036 Bacteria 5946
47 Ga0105244_10046204 3300009036 Bacteria 2238
48 Ga0114129_10001455 3300009147 Bacteria 31985
49 Ga0105243_10040266 3300009148 Bacteria 3647
50 Ga0105242_10080162 3300009176 Bacteria 2728
51 Ga0157371_10000112 3300013102 Bacteria 122773
52 Ga0157371_10055523 3300013102 Bacteria 2810
53 Ga0157370_10006416 3300013104 Bacteria 12974
54 Ga0157370_10181829 3300013104 Bacteria 1954
55 Ga0182008_10000102 3300014497 Bacteria 65960
56 Ga0182006_1000029 3300015261 Bacteria 247579
57 Ga0182007_10000078 3300015262 Bacteria 74593
58 Ga0182005_1000012 3300015265 Bacteria 396944
59 Ga0182005_1000186 3300015265 Bacteria 42690
60 Ga0163161_10001345 3300017792 Bacteria 18295
61 Ga0163161_10013740 3300017792 Bacteria 5639
62 Ga0163161_10053989 3300017792 Bacteria 2915
63 Ga0163161_10097886 3300017792 Bacteria 2179
64 Ga0207425_1000005 3300025245 Bacteria 900502
65 Ga0209129_1000228 3300025258 Bacteria 63465
66 Ga0209565_1000071 3300025263 Bacteria 166213
67 Ga0209565_1000180 3300025263 Bacteria 78672
68 Ga0209673_1000425 3300025273 Bacteria 73588
69 Ga0209673_1010923 3300025273 Bacteria 3787
70 Ga0209130_1013632 3300025284 Bacteria 2074
71 Ga0209675_1000018 3300025291 Bacteria 377481
72 Ga0209675_1001355 3300025291 Bacteria 14431
73 Ga0209676_1000061 3300025292 Bacteria 332674
74 Ga0209676_1000138 3300025292 Bacteria 178932
75 Ga0209676_1000468 3300025292 Bacteria 67646
76 Ga0209676_1000742 3300025292 Bacteria 44232
77 Ga0209676_1000787 3300025292 Bacteria 42065
78 Ga0209676_1000847 3300025292 Bacteria 39519
79 Ga0209676_1001342 3300025292 Bacteria 24674
80 Ga0209676_1001410 3300025292 Bacteria 23188
81 Ga0209025_1000515 3300025294 Bacteria 73801
82 Ga0209564_1000148 3300025295 Bacteria 172177
83 Ga0209564_1000680 3300025295 Bacteria 50194
84 Ga0209758_1000002 3300025297 Bacteria 1400310
85 Ga0209758_1033076 3300025297 Bacteria 2085
86 Ga0209050_1000001 3300025298 Bacteria 3563507
87 Ga0209050_1000017 3300025298 Bacteria 728928
88 Ga0209050_1000486 3300025298 Bacteria 69279
89 Ga0209050_1004354 3300025298 Bacteria 9619
90 Ga0209256_1000007 3300025299 Bacteria 1136599
91 Ga0209256_1007807 3300025299 Bacteria 5150
92 Ga0209256_1010017 3300025299 Bacteria 4049
93 Ga0209256_1022193 3300025299 Bacteria 1928
94 Ga0209051_1000193 3300025303 Bacteria 108391
95 Ga0209257_1000151 3300025304 Bacteria 191408
96 Ga0209257_1000199 3300025304 Bacteria 148045
97 Ga0209257_1000520 3300025304 Bacteria 66890
98 Ga0209257_1001517 3300025304 Bacteria 27226
99 Ga0209257_1001522 3300025304 Bacteria 27092
100 Ga0209257_1003078 3300025304 Bacteria 15025
101 Ga0209257_1018944 3300025304 Bacteria 2617
102 Ga0207713_1001446 3300025735 Bacteria 18946
103 Ga0207650_10002698 3300025925 Bacteria 12265
104 Ga0207709_10001257 3300025935 Bacteria 18191
105 Ga0209282_1000001 3300027666 Bacteria 2450367
106 Ga0268266_10081478 3300028379 Bacteria 2822
107 Ga0307515_10027785 3300028794 Bacteria 9651
108 Ga0316183_1042127 3300030742 Bacteria 15433
109 Ga0307408_100268145 3300031548 Bacteria 1416
110 Ga0307405_10000002 3300031731 Bacteria 575196
111 Ga0307518_10029991 3300031838 Bacteria 3938
112 Ga0307410_10019430 3300031852 Bacteria 4133
113 Ga0307406_10089454 3300031901 Bacteria 2069
114 Ga0307407_10000907 3300031903 Bacteria 10004
115 Ga0307412_10000891 3300031911 Bacteria 17184
116 Ga0307412_10027278 3300031911 Bacteria 3559
117 Ga0307409_100036370 3300031995 Bacteria 3618
118 Ga0307416_100128900 3300032002 Bacteria 2272
119 Ga0307414_10000112 3300032004 Bacteria 57809
120 Ga0307414_10001024 3300032004 Bacteria 14261
121 Ga0307414_10001896 3300032004 Bacteria 10810
122 Ga0307414_10007985 3300032004 Bacteria 5979
123 Ga0307414_10019091 3300032004 Bacteria 4240
124 Ga0307414_10060650 3300032004 Bacteria 2676
125 Ga0307414_10078044 3300032004 Bacteria 2413
126 Ga0307414_10116910 3300032004 Bacteria 2042
127 Ga0307411_10011206 3300032005 Bacteria 4825
128 Ga0395900_0000862 3300037418 Bacteria 40012
129 Ga0395905_0000365 3300037471 Bacteria 64175
130 Ga0395901_0000898 3300038443 Bacteria 32720
131 Ga0439445_0000225 3300042004 Bacteria 10545
132 Ga0450911_001716 3300042115 Bacteria 4776
133 Ga0495627_000057 3300046453 Bacteria 144773
134 Ga0495627_000382 3300046453 Bacteria 40675
135 Ga0495627_000816 3300046453 Bacteria 22782
136 Ga0495590_0000013 3300046457 Bacteria 271977
137 Ga0495590_0005316 3300046457 Bacteria 5112
138 Ga0495638_0000231 3300046460 Bacteria 76477
139 Ga0495638_0000443 3300046460 Bacteria 49906
140 Ga0495638_0016974 3300046460 Bacteria 4866
141 Ga0495650_0000319 3300046471 Bacteria 86032
142 Ga0495650_0000841 3300046471 Bacteria 36967
143 Ga0495582_0005707 3300046473 Bacteria 6931
144 Ga0495584_0000052 3300046491 Bacteria 87015
145 Ga0495584_0000158 3300046491 Bacteria 47396
146 Ga0495584_0043437 3300046491 Bacteria 2268
147 Ga0495585_0000689 3300046492 Bacteria 30697
148 Ga0495596_0003197 3300046500 Bacteria 8429
149 Ga0495583_0001888 3300046506 Bacteria 19427
150 Ga0495583_0002273 3300046506 Bacteria 16846
151 Ga0495583_0024034 3300046506 Bacteria 3070
152 Ga0495606_0001097 3300046507 Bacteria 38786
153 Ga0495606_0002058 3300046507 Bacteria 24600
154 Ga0495606_0011476 3300046507 Bacteria 7224
155 Ga0495610_0000100 3300046512 Bacteria 100499
156 Ga0495610_0000242 3300046512 Bacteria 57692
157 Ga0495610_0002511 3300046512 Bacteria 15321
158 Ga0495610_0017251 3300046512 Bacteria 4121
159 Ga0495616_0054645 3300046513 Bacteria 1980
160 Ga0495630_0001624 3300046517 Bacteria 15634
161 Ga0495631_0000388 3300046518 Bacteria 30331
162 Ga0495631_0012100 3300046518 Bacteria 4225
163 Ga0495632_0000106 3300046519 Bacteria 85449
164 Ga0495632_0001834 3300046519 Bacteria 17120
165 Ga0495643_0000701 3300046522 Bacteria 38480
166 Ga0495643_0071138 3300046522 Bacteria 1826
167 Ga0495643_0071594 3300046522 Bacteria 1819
168 Ga0495643_0097344 3300046522 Bacteria 1512
169 Ga0495644_0005419 3300046523 Bacteria 4984
170 Ga0495644_0006612 3300046523 Bacteria 4492
171 Ga0495644_0012087 3300046523 Bacteria 3320
172 Ga0495648_0000068 3300046524 Bacteria 138518
173 Ga0495648_0002925 3300046524 Bacteria 15347
174 Ga0495648_0021626 3300046524 Bacteria 4451
175 Ga0495663_0000158 3300046525 Bacteria 27654
176 Ga0495663_0001526 3300046525 Bacteria 7285
177 Ga0495663_0003150 3300046525 Bacteria 4810
178 Ga0495666_0023403 3300046526 Bacteria 3054
179 Ga0495642_0004091 3300046528 Bacteria 5689
180 Ga0495642_0073497 3300046528 Bacteria 1432
181 Ga0495642_0081233 3300046528 Bacteria 1365
182 Ga0495654_0025284 3300046530 Bacteria 3060
183 Ga0495665_0015219 3300046531 Bacteria 4145
184 Ga0495587_0027551 3300046536 Bacteria 3459
185 Ga0495609_0001514 3300046538 Bacteria 15315
186 Ga0495597_0002022 3300046542 Bacteria 13573
187 Ga0495597_0008090 3300046542 Bacteria 5290
188 Ga0495597_0038385 3300046542 Bacteria 2146
189 Ga0495597_0048990 3300046542 Bacteria 1868
190 Ga0495633_0004513 3300046558 Bacteria 8807
191 Ga0495633_0043360 3300046558 Bacteria 2134
192 Ga0495656_0021402 3300046615 Bacteria 2517
193 Ga0495668_0000079 3300046616 Bacteria 157703
194 Ga0495668_0006679 3300046616 Bacteria 7511
195 Ga0495668_0024656 3300046616 Bacteria 3420
196 Ga0495668_0041073 3300046616 Bacteria 2578
197 Ga0495634_0005767 3300046642 Bacteria 9455
198 Ga0495611_0000214 3300046648 Bacteria 40851
199 Ga0495611_0002129 3300046648 Bacteria 9262
200 Ga0495611_0046924 3300046648 Bacteria 1938
201 Ga0495625_0000115 3300046660 Bacteria 122861
202 Ga0495625_0011607 3300046660 Bacteria 7167
203 Ga0495625_0097911 3300046660 Bacteria 2018
204 Ga0495659_0000003 3300046664 Bacteria 169166
205 Ga0495661_0008712 3300046665 Bacteria 7002
206 Ga0495588_0014079 3300046674 Bacteria 3823
207 Ga0495670_0023295 3300046691 Bacteria 3056
208 Ga0495670_0035415 3300046691 Bacteria 2488
209 Ga0495671_0000116 3300046692 Bacteria 71676
210 Ga0495671_0078537 3300046692 Bacteria 1618
211 Ga0495589_0092924 3300046794 Bacteria 1464
212 Ga0495660_0000387 3300046810 Bacteria 38226
213 Ga0495660_0000766 3300046810 Bacteria 24160
214 Ga0495660_0001518 3300046810 Bacteria 15672
215 Ga0495604_0047564 3300047317 Bacteria 3340
216 Ga0495636_0017234 3300047318 Bacteria 2890
217 Ga0495672_0000023 3300047320 Bacteria 419080
218 Ga0495672_0000092 3300047320 Bacteria 146431
219 Ga0495672_0002661 3300047320 Bacteria 16113
220 Ga0495675_0111487 3300047444 Bacteria 1707
221 Ga0495677_0000270 3300047445 Bacteria 22801
222 Ga0495677_0006501 3300047445 Bacteria 4415
223 Ga0495685_012503 3300047447 Bacteria 2876
224 Ga0495685_013323 3300047447 Bacteria 2791
225 Ga0495673_0000037 3300047469 Bacteria 307717
226 Ga0495673_0000191 3300047469 Bacteria 96817
227 Ga0495673_0001084 3300047469 Bacteria 23777
228 Ga0495681_0000052 3300047470 Bacteria 106939
229 Ga0495681_0026380 3300047470 Bacteria 3025
230 Ga0495681_0048870 3300047470 Bacteria 2003
231 Ga0495686_0000638 3300047472 Bacteria 48292
232 Ga0495686_0003555 3300047472 Bacteria 13399
233 Ga0495686_0071716 3300047472 Bacteria 2131
234 Ga0495602_0008110 3300048088 Bacteria 10970
235 Ga0495626_0013215 3300048091 Bacteria 4296
236 Ga0496102_0218830 3300048905 Bacteria 1795
237 Ga0496105_0001538 3300048908 Bacteria 16328
238 Ga0496115_0000522 3300048918 Bacteria 29892
239 Ga0496116_0000534 3300048919 Bacteria 51055
240 Ga0496116_0024066 3300048919 Bacteria 4514
241 Ga0496116_0068977 3300048919 Bacteria 2250
242 Ga0496116_0118326 3300048919 Bacteria 1539
243 Ga0496117_0000299 3300048920 Bacteria 87312
244 Ga0496117_0001192 3300048920 Bacteria 39109
245 Ga0496117_0002380 3300048920 Bacteria 23939
246 Ga0496117_0007053 3300048920 Bacteria 11116
247 Ga0496118_0000213 3300048921 Bacteria 101146
248 Ga0496118_0000288 3300048921 Bacteria 87720
249 Ga0496118_0002180 3300048921 Bacteria 27253
250 Ga0496118_0004282 3300048921 Bacteria 17073
251 Ga0496118_0016142 3300048921 Bacteria 6867
252 Ga0496118_0075946 3300048921 Bacteria 2392
253 Ga0496119_0000176 3300048922 Bacteria 89501
254 Ga0496119_0000387 3300048922 Bacteria 60788
255 Ga0496120_0000277 3300048923 Bacteria 85951
256 Ga0496120_0000355 3300048923 Bacteria 75259
257 Ga0496121_0000995 3300048924 Bacteria 50680
258 Ga0496121_0004221 3300048924 Bacteria 19586
259 Ga0496121_0033288 3300048924 Bacteria 4667
260 Ga0496122_0001665 3300048925 Bacteria 34476
261 Ga0496122_0002717 3300048925 Bacteria 24570
262 Ga0496122_0006740 3300048925 Bacteria 13072
263 Ga0496122_0010726 3300048925 Bacteria 9398
264 Ga0496123_0000835 3300048926 Bacteria 49302
265 Ga0496124_0000006 3300048927 Bacteria 904259
266 Ga0496124_0000775 3300048927 Bacteria 52105
267 Ga0496124_0007998 3300048927 Bacteria 11126
268 Ga0496124_0017008 3300048927 Bacteria 6881
269 Ga0496124_0071813 3300048927 Bacteria 2867
270 Ga0496125_0001174 3300048928 Bacteria 39666
271 Ga0496125_0002529 3300048928 Bacteria 23603
272 Ga0496125_0008670 3300048928 Bacteria 10592
273 Ga0496125_0013621 3300048928 Bacteria 7985
274 Ga0496125_0022666 3300048928 Bacteria 5824
275 Ga0496125_0047144 3300048928 Bacteria 3607
276 Ga0496126_0003774 3300048929 Bacteria 18815
277 Ga0495678_000797 3300049459 Bacteria 28241
278 Ga0495682_0001950 3300049460 Bacteria 10225
279 Ga0501033_0008585 3300049570 Bacteria 7906
280 Ga0501034_0002935 3300049571 Bacteria 19767
281 Ga0501038_0081048 3300049574 Bacteria 2735
282 Ga0501043_0040532 3300049579 Bacteria 3661
283 Ga0501225_0004199 3300049705 Bacteria 4304
284 Ga0501044_0036090 3300049823 Bacteria 5174
285 nmdc:mga00v17_23_c1 3300050491 Bacteria 43132
286 nmdc:mga05p37_25970_c1 3300050507 Bacteria 7121
287 nmdc:mga09592_243173_c1 3300050508 Bacteria 1559
288 nmdc:mga09592_308451_c1 3300050508 Bacteria 1372
289 Ga0500578_0000059 3300053086 Bacteria 119108
290 Ga0500643_007697 3300053087 Bacteria 4309
291 Ga0500644_0000126 3300053088 Bacteria 47091
292 Ga0500644_0004129 3300053088 Bacteria 3618
293 Ga0500562_000117 3300053108 Bacteria 26644
294 Ga0500562_000474 3300053108 Bacteria 9720
295 Ga0500594_0000035 3300053118 Bacteria 43761
296 Ga0500608_000030 3300053122 Bacteria 66677
297 Ga0500626_071935 3300053128 Bacteria 1538
298 Ga0500658_0027598 3300053134 Bacteria 2197
299 Ga0500559_0009291 3300053136 Bacteria 4263
300 Ga0500559_0012505 3300053136 Bacteria 3607
301 Ga0500564_000018 3300053138 Bacteria 52235
302 Ga0500568_0000275 3300053139 Bacteria 43254
303 Ga0500568_0023098 3300053139 Bacteria 2649
304 Ga0500577_0000629 3300053142 Bacteria 9038
305 Ga0500604_0011500 3300053151 Bacteria 2377
306 Ga0500622_0000176 3300053156 Bacteria 69125
307 Ga0500622_0000184 3300053156 Bacteria 67149
308 Ga0500622_0009063 3300053156 Bacteria 5527
309 2524611802 2524023250 Bacteria 5457705
310 2547499816 2547132130 Bacteria 4660562
311 2578460007 2576861471 Bacteria 4648976
312 2585147085 2582581279 Bacteria 4980720
313 2587916543 2585428106 Bacteria 5179711
314 2643799708 2643221556 Bacteria 7251154
315 2643834097 2643221563 Bacteria 4726935
316 2643924699 2643221583 Bacteria 5218014
317 2644055023 2643221608 Bacteria 4724829
318 2644128319 2643221622 Bacteria 4212502
319 2644225926 2643221640 Bacteria 5258820
320 2644235415 2643221642 Bacteria 5357871
321 2644252737 2643221645 Bacteria 7207331
322 2644355201 2643221664 Bacteria 7272945
323 2644474708 2643221684 Bacteria 7145183
324 2738737614 2738541280 Bacteria 6630198
325 2738841819 2738541300 Bacteria 6675882
326 2739272676 2738543018 Bacteria 6718814
327 2739341720 2738543030 Bacteria 6719714
328 2739793061 2739367756 Bacteria 4553612
329 2747950736 2747842428 Bacteria 4689383
330 2765580141 2765235840 Bacteria 4663337
331 2792461533 2791355048 Bacteria 5832535
332 2819555230 2818991438 Bacteria 5793701
333 2819660415 2818991457 Bacteria 5323295
334 2842392185 2842391507 Bacteria 4486072
335 2842758835 2842757796 Bacteria 3981385
336 2842782279 2842780639 Bacteria 4337790
337 2843746239 2843744320 Bacteria 5659202
338 2849563864 2849560528 Bacteria 5393480
339 2849575889 2849573788 Bacteria 5421256
340 2851156667 2851153111 Bacteria 5542585
341 2852652575 2852649853 Bacteria 4036942
342 2852656551 2852653556 Bacteria 4050083
343 2852684484 2852680915 Bacteria 4100189
344 2852689049 2852684882 Bacteria 5463342
345 2857445595 2857442823 Bacteria 4562550
346 2857504788 2857504554 Bacteria 5369913
347 2874222830 2874220319 Bacteria 4594709
348 2894414357 2894414249 Bacteria 4405451
349 2898332021 2898329390 Bacteria 5168154
350 2919092761 2919089067 Bacteria 4560942
351 2919130318 2919130084 Bacteria 5301837
352 2919135891 2919134579 Bacteria 4480386
353 2919480169 2919476304 Bacteria 5888696
354 2919515807 2919513703 Bacteria 3844312
355 2919675471 2919675420 Bacteria 3969095
356 2928499643 2928496128 Bacteria 4631123
357 2928534079 2928531327 Bacteria 5101314
358 2929158129 2929154850 Bacteria 6753285
359 2929198679 2929195423 Bacteria 5325372
360 2931383713 2931380184 Bacteria 4455911
361 2937615147 2937610967 Bacteria 4618818
362 2939593087 2939589442 Bacteria 4214238
363 2939626234 2939622612 Bacteria 4698046
364 2939629471 2939626828 Bacteria 4695272
365 2941479630 2941475908 Bacteria 4145589
366 2961049595 2961047084 Bacteria 4594415
367 2961067479 2961064222 Bacteria 4749990
368 2974310438 2974307012 Bacteria 4172388
369 2977251172 2977247770 Bacteria 4160543
370 2984518188 2984514374 Bacteria 4172479
371 Ga0182006_1031232
372 SwRhRL2b_contig_267781
373 SwRhRL2b_contig_407547
374 JGI25150J39212_1000798
375 JGI25153J46596_10000027
376 rootH2_10005730
377 Ga0055526_1000312
378 Ga0055526_1001321
379 Ga0055537_1000299
380 Ga0055524_1000010
381 Ga0055536_1000178
382 Ga0055536_1000344
383 Ga0055536_1000885
384 Ga0055536_1006029
385 Ga0055536_1007978
386 Ga0055534_1000162
387 Ga0055534_1006932
388 Ga0055528_1000194
389 Ga0055530_10000206
390 Ga0055530_10008915
391 Ga0055530_10010089
392 Ga0055540_1001052
393 Ga0055540_1006233
394 Ga0055531_10000395
395 Ga0055531_10000526
396 Ga0055531_10015265
397 Ga0055531_10021309
398 Ga0055531_10021329
399 Ga0065165_1005298
400 Ga0065704_10074011
401 Ga0065704_10075313
402 Ga0065707_10004245
403 Ga0070670_100006596
404 Ga0081539_10000938
405 Ga0075363_100016431
406 Ga0075364_10000319
407 Ga0075367_10015709
408 Ga0075369_10038829
409 Ga0075366_10005096
410 Ga0075428_100029472
411 Ga0075428_100092791
412 Ga0075429_100064233
413 Ga0075429_100249833
414 Ga0099826_10000002
415 Ga0105251_10004939
416 Ga0105244_10009561
417 Ga0105244_10046204
418 Ga0114129_10001455
419 Ga0105243_10040266
420 Ga0105242_10080162
421 Ga0157371_10000112
422 Ga0157371_10055523
423 Ga0157370_10006416
424 Ga0157370_10181829
425 Ga0182008_10000102
426 Ga0182006_1000029
427 Ga0182007_10000078
428 Ga0182005_1000012
429 Ga0182005_1000186
430 Ga0163161_10001345
431 Ga0163161_10013740
432 Ga0163161_10053989
433 Ga0163161_10097886
434 Ga0207425_1000005
435 Ga0209129_1000228
436 Ga0209565_1000071
437 Ga0209565_1000180
438 Ga0209673_1000425
439 Ga0209673_1010923
440 Ga0209130_1013632
441 Ga0209675_1000018
442 Ga0209675_1001355
443 Ga0209676_1000061
444 Ga0209676_1000138
445 Ga0209676_1000468
446 Ga0209676_1000742
447 Ga0209676_1000787
448 Ga0209676_1000847
449 Ga0209676_1001342
450 Ga0209676_1001410
451 Ga0209025_1000515
452 Ga0209564_1000148
453 Ga0209564_1000680
454 Ga0209758_1000002
455 Ga0209758_1033076
456 Ga0209050_1000001
457 Ga0209050_1000017
458 Ga0209050_1000486
459 Ga0209050_1004354
460 Ga0209256_1000007
461 Ga0209256_1007807
462 Ga0209256_1010017
463 Ga0209256_1022193
464 Ga0209051_1000193
465 Ga0209257_1000151
466 Ga0209257_1000199
467 Ga0209257_1000520
468 Ga0209257_1001517
469 Ga0209257_1001522
470 Ga0209257_1003078
471 Ga0209257_1018944
472 Ga0207713_1001446
473 Ga0207650_10002698
474 Ga0207709_10001257
475 Ga0209282_1000001
476 Ga0268266_10081478
477 Ga0307515_10027785
478 Ga0316183_1042127
479 Ga0307408_100268145
480 Ga0307405_10000002
481 Ga0307518_10029991
482 Ga0307410_10019430
483 Ga0307406_10089454
484 Ga0307407_10000907
485 Ga0307412_10000891
486 Ga0307412_10027278
487 Ga0307409_100036370
488 Ga0307416_100128900
489 Ga0307414_10000112
490 Ga0307414_10001024
491 Ga0307414_10001896
492 Ga0307414_10007985
493 Ga0307414_10019091
494 Ga0307414_10060650
495 Ga0307414_10078044
496 Ga0307414_10116910
497 Ga0307411_10011206
498 Ga0395900_0000862
499 Ga0395905_0000365
500 Ga0395901_0000898
501 Ga0439445_0000225
502 Ga0450911_001716
503 Ga0495627_000057
504 Ga0495627_000382
505 Ga0495627_000816
506 Ga0495590_0000013
507 Ga0495590_0005316
508 Ga0495638_0000231
509 Ga0495638_0000443
510 Ga0495638_0016974
511 Ga0495650_0000319
512 Ga0495650_0000841
513 Ga0495582_0005707
514 Ga0495584_0000052
515 Ga0495584_0000158
516 Ga0495584_0043437
517 Ga0495585_0000689
518 Ga0495596_0003197
519 Ga0495583_0001888
520 Ga0495583_0002273
521 Ga0495583_0024034
522 Ga0495606_0001097
523 Ga0495606_0002058
524 Ga0495606_0011476
525 Ga0495610_0000100
526 Ga0495610_0000242
527 Ga0495610_0002511
528 Ga0495610_0017251
529 Ga0495616_0054645
530 Ga0495630_0001624
531 Ga0495631_0000388
532 Ga0495631_0012100
533 Ga0495632_0000106
534 Ga0495632_0001834
535 Ga0495643_0000701
536 Ga0495643_0071138
537 Ga0495643_0071594
538 Ga0495643_0097344
539 Ga0495644_0005419
540 Ga0495644_0006612
541 Ga0495644_0012087
542 Ga0495648_0000068
543 Ga0495648_0002925
544 Ga0495648_0021626
545 Ga0495663_0000158
546 Ga0495663_0001526
547 Ga0495663_0003150
548 Ga0495666_0023403
549 Ga0495642_0004091
550 Ga0495642_0073497
551 Ga0495642_0081233
552 Ga0495654_0025284
553 Ga0495665_0015219
554 Ga0495587_0027551
555 Ga0495609_0001514
556 Ga0495597_0002022
557 Ga0495597_0008090
558 Ga0495597_0038385
559 Ga0495597_0048990
560 Ga0495633_0004513
561 Ga0495633_0043360
562 Ga0495656_0021402
563 Ga0495668_0000079
564 Ga0495668_0006679
565 Ga0495668_0024656
566 Ga0495668_0041073
567 Ga0495634_0005767
568 Ga0495611_0000214
569 Ga0495611_0002129
570 Ga0495611_0046924
571 Ga0495625_0000115
572 Ga0495625_0011607
573 Ga0495625_0097911
574 Ga0495659_0000003
575 Ga0495661_0008712
576 Ga0495588_0014079
577 Ga0495670_0023295
578 Ga0495670_0035415
579 Ga0495671_0000116
580 Ga0495671_0078537
581 Ga0495589_0092924
582 Ga0495660_0000387
583 Ga0495660_0000766
584 Ga0495660_0001518
585 Ga0495604_0047564
586 Ga0495636_0017234
587 Ga0495672_0000023
588 Ga0495672_0000092
589 Ga0495672_0002661
590 Ga0495675_0111487
591 Ga0495677_0000270
592 Ga0495677_0006501
593 Ga0495685_012503
594 Ga0495685_013323
595 Ga0495673_0000037
596 Ga0495673_0000191
597 Ga0495673_0001084
598 Ga0495681_0000052
599 Ga0495681_0026380
600 Ga0495681_0048870
601 Ga0495686_0000638
602 Ga0495686_0003555
603 Ga0495686_0071716
604 Ga0495602_0008110
605 Ga0495626_0013215
606 Ga0496102_0218830
607 Ga0496105_0001538
608 Ga0496115_0000522
609 Ga0496116_0000534
610 Ga0496116_0024066
611 Ga0496116_0068977
612 Ga0496116_0118326
613 Ga0496117_0000299
614 Ga0496117_0001192
615 Ga0496117_0002380
616 Ga0496117_0007053
617 Ga0496118_0000213
618 Ga0496118_0000288
619 Ga0496118_0002180
620 Ga0496118_0004282
621 Ga0496118_0016142
622 Ga0496118_0075946
623 Ga0496119_0000176
624 Ga0496119_0000387
625 Ga0496120_0000277
626 Ga0496120_0000355
627 Ga0496121_0000995
628 Ga0496121_0004221
629 Ga0496121_0033288
630 Ga0496122_0001665
631 Ga0496122_0002717
632 Ga0496122_0006740
633 Ga0496122_0010726
634 Ga0496123_0000835
635 Ga0496124_0000006
636 Ga0496124_0000775
637 Ga0496124_0007998
638 Ga0496124_0017008
639 Ga0496124_0071813
640 Ga0496125_0001174
641 Ga0496125_0002529
642 Ga0496125_0008670
643 Ga0496125_0013621
644 Ga0496125_0022666
645 Ga0496125_0047144
646 Ga0496126_0003774
647 Ga0495678_000797
648 Ga0495682_0001950
649 Ga0501033_0008585
650 Ga0501034_0002935
651 Ga0501038_0081048
652 Ga0501043_0040532
653 Ga0501225_0004199
654 Ga0501044_0036090
655 nmdc:mga00v17_23_c1
656 nmdc:mga05p37_25970_c1
657 nmdc:mga09592_243173_c1
658 nmdc:mga09592_308451_c1
659 Ga0500578_0000059
660 Ga0500643_007697
661 Ga0500644_0000126
662 Ga0500644_0004129
663 Ga0500562_000117
664 Ga0500562_000474
665 Ga0500594_0000035
666 Ga0500608_000030
667 Ga0500626_071935
668 Ga0500658_0027598
669 Ga0500559_0009291
670 Ga0500559_0012505
671 Ga0500564_000018
672 Ga0500568_0000275
673 Ga0500568_0023098
674 Ga0500577_0000629
675 Ga0500604_0011500
676 Ga0500622_0000176
677 Ga0500622_0000184
678 Ga0500622_0009063
679 2524611802
680 2547499816
681 2578460007
682 2585147085
683 2587916543
684 2643799708
685 2643834097
686 2643924699
687 2644055023
688 2644128319
689 2644225926
690 2644235415
691 2644252737
692 2644355201
693 2644474708
694 2738737614
695 2738841819
696 2739272676
697 2739341720
698 2739793061
699 2747950736
700 2765580141
701 2792461533
702 2819555230
703 2819660415
704 2842392185
705 2842758835
706 2842782279
707 2843746239
708 2849563864
709 2849575889
710 2851156667
711 2852652575
712 2852656551
713 2852684484
714 2852689049
715 2857445595
716 2857504788
717 2874222830
718 2894414357
719 2898332021
720 2919092761
721 2919130318
722 2919135891
723 2919480169
724 2919515807
725 2919675471
726 2928499643
727 2928534079
728 2929158129
729 2929198679
730 2931383713
731 2937615147
732 2939593087
733 2939626234
734 2939629471
735 2941479630
736 2961049595
737 2961067479
738 2974310438
739 2977251172
740 2984518188

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07690

MFS_1

Major Facilitator Superfamily

27

307

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
6e9o-assembly2.cif.gz_A e. coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form 0.9202 13 428
6e9o-assembly2.cif.gz_A e. coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form 0.9179 13 428
6e9o-assembly1.cif.gz_B e. coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form 0.9036 13 427
6e9o-assembly1.cif.gz_B e. coli d-galactonate:proton symporter mutant e133q in the outward substrate-bound form 0.9015 13 427
7t3o-assembly1.cif.gz_A rat vesicular glutamate transporter 2 (vglut2) in low cl condition 0.8869 17 432
ID Description Score Start End Superfamily
af_Q2FVB9_1_200_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9675 10 208 1.20.1250.20
af_P0AA76_9_204_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9632 13 208 1.20.1250.20
af_P0AA78_1_199_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.963 15 209 1.20.1250.20
af_Q2FVB9_1_200_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9581 10 208 1.20.1250.20
af_A0A0R0F726_79_268_1.20.1250.20 Mainly Alpha;Up-down Bundle;Growth Hormone; Chain: A;;MFS general substrate transporter like domains 0.9539 17 203 1.20.1250.20
ID Description Score Start End GO Terms
AF-A0A257PUD3-F1-model_v4 Major facilitator superfamily (MFS) profile domain-containing protein 0.943 17 168 GO:0016020
GO:0022857
AF-A0A2V7WUS4-F1-model_v4 MFS transporter 0.9427 8 187 GO:0016020
GO:0022857
AF-A0A2V9RJV5-F1-model_v4 MFS transporter 0.9365 28 189 GO:0016020
GO:0022857
AF-A0A4Q3HNF4-F1-model_v4 deleted 0.9363 18 177
AF-A0A2V7WUS4-F1-model_v4 MFS transporter 0.9328 8 187 GO:0016020
GO:0022857

Map