F424987

General Info

Members Datasets Scaffolds Average Seq Length
369 236 321 311

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10102861|Ga0075364_101028612
Length 347
Sequence MAEVSSPNVQLPWHVRLVTMTSPRPSNDHDMRILVLGAGGTGGYFGGRLAQAGVDVTFLVRPARAAQLDRDGLQIRSALGDADVKVAHVVADALPALAEATPFDLVMLSCKAYDLEDAVDAIAPAVGPGTSVMPILNGLLHYPVLDARFGPERVLGGLCFISAMKGEHGEVLHFGTPASVTFGERDPRANGSRRSRAFEAACAQGGFDFTRSDDFMQAAWNKFSFLATLAAATCLMRASIGRIVAAEGGEAFLSALHDECLAVADVAGQTIPADAARQARTLVTQAGSPVTASMLRDLESGQDVEAAQIVGDMRARAHAAGLAAPHLDAAWVHLQTYRARRETPQTP

Samples

Sample ID Description Type Environment
1 2510917027 Brevibacillus sp. CF112 Isolate Rhizosphere
2 2512564013 Brevibacillus sp. BC25 Isolate Rhizosphere
3 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
4 2547132130 Stenotrophomonas maltophilia RR-10 Isolate Unclassified
5 2576861471 Stenotrophomonas rhizophila DSM 14405 Isolate Rhizosphere
6 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
7 2643221581 Pseudoxanthomonas sp. Root65 Isolate Unclassified
8 2687453130 Dyella thiooxydans ATSB10 Isolate Unclassified
9 2721755763 Pandoraea thiooxydans ATSB16 Isolate Rhizosphere
10 2747842501 Xanthomonas sp. WCS2014-23 Isolate Unclassified
11 2765235840 Stenotrophomonas maltophilia AA1 Isolate Unclassified
12 2816332141 Stenotrophomonas muris 1190 (v2) (version 2) Isolate Unclassified
13 2842391507 Stenotrophomonas maltophilia SEMIA 4027 Isolate Nodule
14 2842694124 Methylopila sp. R-72369 Isolate Unclassified
15 2842757796 Stenotrophomonas sp. R-72406 Isolate Unclassified
16 2852649853 Stenotrophomonas sp. JAI102 Isolate Rhizosphere
17 2857442823 Stenotrophomonas sp. R-74235 Isolate Unclassified
18 2857460504 Brevibacillus sp. R-74223 Isolate Unclassified
19 2857465823 Brevibacillus sp. R-74266 Isolate Unclassified
20 2857591370 Brevibacillus sp. R-71934 Isolate Unclassified
21 2874220319 Stenotrophomonas maltophilia PS5 Isolate Unclassified
22 2884338543 Luteibacter pinisoli MAH-14 Isolate Rhizosphere
23 2885266251 Ralstonia sp. SET104 Isolate Nodule
24 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
25 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
26 2915597211 Brevibacillus brevis Ag35 Isolate Nodule
27 2915606848 Brevibacillus sp. HD1.4A Isolate Rhizosphere
28 2919089067 Stenotrophomonas sp. 1337 Isolate Rhizosphere
29 2919134579 Stenotrophomonas geniculata 1733 Isolate Rhizosphere
30 2919513703 Luteimonas sp. 3794 Isolate Unclassified
31 2919675420 Luteimonas terrae 4099 Isolate Unclassified
32 2923516293 Pseudoxanthomonas mexicana SLBN-89 Isolate Rhizosphere
33 2928496128 Stenotrophomonas indicatrix 1163 Isolate Unclassified
34 2929183550 Brevibacillus sp. R-71971 Hybrid assembly Isolate Unclassified
35 2931380184 Stenotrophomonas sp. DR822 Isolate Rhizosphere
36 2937610967 Stenotrophomonas maltophilia EP20 Isolate Unclassified
37 2939589442 Stenotrophomonas rhizophila 716 Isolate Rhizosphere
38 2939622612 Stenotrophomonas sp. 2619 Isolate Rhizosphere
39 2939626828 Stenotrophomonas sp. 2694 Isolate Rhizosphere
40 2941471342 Luteibacter sp. 621 Isolate Unclassified
41 2941475908 Stenotrophomonas rhizophila 2680 Isolate Rhizosphere
42 2961047084 Stenotrophomonas maltophilia EP5 Isolate Unclassified
43 2961064222 Stenotrophomonas maltophilia EP13 Isolate Unclassified
44 2974307012 Stenotrophomonas sp. SORGH_AS_0282 Isolate Unclassified
45 2977247770 Stenotrophomonas rhizophila SORGH_AS 457 Isolate Unclassified
46 2984514374 Stenotrophomonas sp. SORGH_AS282 Isolate Aerial Root
47 2987605356 Stenotrophomonas sp. ATCM1_4 Isolate Unclassified
48 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
49 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
50 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
51 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
52 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
53 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
54 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
55 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
56 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
57 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
58 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
59 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
60 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
61 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
62 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
63 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
64 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
65 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
66 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
67 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
68 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
69 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
70 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
71 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
72 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
73 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
74 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
75 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
76 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
77 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
78 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
79 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
80 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
81 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
82 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
83 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
84 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
85 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
86 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
87 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
88 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
89 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
90 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
91 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
92 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
93 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
94 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
95 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
96 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
97 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
98 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
99 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
100 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
101 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
102 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
103 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
104 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
105 3300015685 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.5_G12 Metagenome Unclassified
106 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
107 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
108 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
109 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
110 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
111 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
112 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
113 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
114 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
115 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
116 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
117 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
118 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
119 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
121 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
122 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
123 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
124 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
127 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
128 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
129 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
131 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
136 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
137 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
140 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
142 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
143 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
144 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
146 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
147 3300030745 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 8 Metagenome Rhizosphere
148 3300030878 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
149 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
150 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
151 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
152 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
153 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
154 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
155 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
156 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
157 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
158 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
159 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
160 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
161 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
162 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
163 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
164 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
165 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
166 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
167 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
168 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
169 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
170 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
171 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
172 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
173 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
174 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
175 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
176 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
177 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
178 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
179 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
180 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
181 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
182 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
183 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
184 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
185 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
186 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
187 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
188 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
189 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
190 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
191 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
192 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
193 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
194 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
195 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
196 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
197 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
198 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
199 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
200 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
201 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
202 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
203 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
204 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
205 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
206 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
207 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
208 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
209 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
210 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
211 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
212 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
213 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
214 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
215 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
216 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
217 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
218 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
219 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
220 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
221 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
222 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
223 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
224 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
225 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
226 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
227 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
228 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
229 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
230 3300053128 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 endosphere Metagenome Endosphere
231 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
232 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
233 3300053734 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 endosphere Metagenome Endosphere
234 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
235 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
236 641736151 Paraburkholderia graminis C4D1M Isolate Rhizoplane

Type Distribution

Type Percentage (%)
Metagenomes 85.91
Metatranscriptomes 1.08
Isolates 13.01

Biome Distribution

Category Percentage (%)
Aerial Root 0.27
Bulb 0
Endosphere 14.91
Nodule 1.08
Rhizoplane 4.34
Rhizosphere 54.74
Stem 0
Stem Tuber 0
Unclassified 24.66

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10000876 3300002067 Bacteria 10746
2 JGI25165J46597_1000851 3300003214 Bacteria 22200
3 rootH1_10094560 3300003323 Bacteria 2941
4 Ga0006562J51391_1046708 3300003578 Bacteria 2590
5 Ga0006562J51391_1046712 3300003578 Bacteria 1360
6 Ga0055532_1000166 3300003758 Bacteria 57297
7 Ga0055532_1000192 3300003758 Bacteria 51088
8 Ga0055527_1000102 3300003760 Bacteria 62010
9 Ga0055535_1000208 3300003761 Bacteria 62010
10 Ga0055542_1000248 3300003762 Bacteria 62010
11 Ga0055529_1000267 3300003763 Bacteria 62010
12 Ga0055529_1001199 3300003763 Bacteria 10297
13 Ga0055526_1001691 3300003771 Bacteria 15416
14 Ga0055537_1001178 3300003773 Bacteria 11171
15 Ga0055536_1000800 3300003781 Bacteria 20842
16 Ga0055528_1000205 3300003790 Bacteria 50027
17 Ga0055530_10000466 3300003791 Bacteria 35440
18 Ga0055530_10000918 3300003791 Bacteria 24170
19 Ga0055540_1004549 3300003792 Bacteria 6179
20 Ga0055531_10000494 3300003794 Bacteria 36120
21 Ga0058692_1000004 3300003856 Bacteria 431119
22 Ga0065704_10073116 3300005289 Bacteria 7568
23 Ga0070680_100001300 3300005336 Bacteria 18072
24 Ga0070682_100007542 3300005337 Bacteria 6131
25 Ga0070668_100054398 3300005347 Bacteria 3087
26 Ga0070659_100086640 3300005366 Bacteria 2506
27 Ga0070713_100330075 3300005436 Bacteria 1411
28 Ga0070705_100007674 3300005440 Bacteria 5322
29 Ga0070663_100002113 3300005455 Bacteria 11132
30 Ga0070678_100003465 3300005456 Bacteria 8797
31 Ga0070681_10002018 3300005458 Bacteria 18377
32 Ga0070707_100049841 3300005468 Bacteria 4014
33 Ga0068853_100028689 3300005539 Bacteria 4683
34 Ga0070695_100002725 3300005545 Bacteria 10232
35 Ga0070695_100055324 3300005545 Bacteria 2557
36 Ga0070693_100026858 3300005547 Bacteria 3112
37 Ga0070704_100040491 3300005549 Bacteria 3208
38 Ga0068855_100004317 3300005563 Bacteria 17383
39 Ga0068855_100108272 3300005563 Bacteria 3192
40 Ga0070664_100057274 3300005564 Bacteria 3313
41 Ga0068856_100042495 3300005614 Bacteria 4471
42 Ga0068870_10058948 3300005840 Bacteria 2057
43 Ga0075363_100074497 3300006048 Bacteria 1848
44 Ga0075364_10053328 3300006051 Bacteria 2644
45 Ga0075364_10102861 3300006051 Bacteria 1902
46 Ga0075364_10122473 3300006051 Bacteria 1741
47 Ga0075364_10198015 3300006051 Bacteria 1361
48 Ga0075436_100114642 3300006914 Bacteria 1882
49 Ga0105251_10004152 3300009011 Bacteria 10085
50 Ga0105244_10012689 3300009036 Bacteria 4968
51 Ga0105244_10068224 3300009036 Bacteria 1777
52 Ga0105240_10167830 3300009093 Bacteria 2602
53 Ga0105243_10024400 3300009148 Bacteria 4612
54 Ga0105237_10047178 3300009545 Bacteria 4331
55 Ga0105238_10023210 3300009551 Bacteria 6324
56 Ga0105239_10035000 3300010375 Bacteria 5516
57 Ga0157371_10000158 3300013102 Bacteria 99529
58 Ga0157371_10009111 3300013102 Bacteria 7842
59 Ga0157370_10008298 3300013104 Bacteria 11210
60 Ga0157370_10065936 3300013104 Bacteria 3425
61 Ga0157370_10074090 3300013104 Bacteria 3212
62 Ga0157369_10008177 3300013105 Bacteria 12003
63 Ga0157369_10068091 3300013105 Bacteria 3825
64 Ga0163162_10197522 3300013306 Bacteria 2140
65 Ga0157375_10093420 3300013308 Bacteria 3074
66 Ga0163163_10456563 3300014325 Bacteria 1338
67 Ga0182008_10000063 3300014497 Bacteria 89315
68 Ga0182008_10034977 3300014497 Bacteria 2518
69 Ga0157379_10122484 3300014968 Bacteria 2340
70 Ga0182006_1005330 3300015261 Bacteria 6146
71 Ga0182006_1007487 3300015261 Bacteria 4994
72 Ga0182006_1014381 3300015261 Bacteria 3414
73 Ga0182007_10000019 3300015262 Bacteria 194770
74 Ga0182005_1000239 3300015265 Bacteria 35109
75 Ga0183369_1008 3300015685 Bacteria 346514
76 Ga0163161_10019733 3300017792 Bacteria 4729
77 Ga0163161_10061348 3300017792 Bacteria 2737
78 Ga0209672_100021 3300025228 Bacteria 428473
79 Ga0209672_103877 3300025228 Bacteria 2942
80 Ga0209147_100025 3300025229 Bacteria 428473
81 Ga0207427_100484 3300025231 Bacteria 21500
82 Ga0209258_100037 3300025242 Bacteria 428473
83 Ga0209148_1000049 3300025254 Bacteria 428473
84 Ga0209233_1000204 3300025261 Bacteria 118907
85 Ga0209233_1000322 3300025261 Bacteria 51917
86 Ga0209565_1000051 3300025263 Bacteria 212284
87 Ga0209455_1000041 3300025272 Bacteria 428473
88 Ga0209455_1000462 3300025272 Bacteria 30709
89 Ga0209673_1000581 3300025273 Bacteria 57816
90 Ga0209673_1019027 3300025273 Bacteria 2478
91 Ga0209675_1000007 3300025291 Bacteria 683430
92 Ga0209676_1000018 3300025292 Bacteria 631385
93 Ga0209676_1000035 3300025292 Bacteria 459284
94 Ga0209676_1000143 3300025292 Bacteria 175267
95 Ga0209564_1000533 3300025295 Bacteria 61798
96 Ga0209050_1000109 3300025298 Bacteria 219706
97 Ga0209050_1000448 3300025298 Bacteria 74673
98 Ga0209256_1006264 3300025299 Bacteria 6388
99 Ga0209051_1000196 3300025303 Bacteria 107028
100 Ga0209051_1001121 3300025303 Bacteria 24474
101 Ga0209051_1002828 3300025303 Bacteria 11965
102 Ga0209257_1000035 3300025304 Bacteria 631463
103 Ga0209257_1000305 3300025304 Bacteria 107001
104 Ga0209257_1003791 3300025304 Bacteria 12453
105 Ga0207713_1007798 3300025735 Bacteria 6247
106 Ga0207647_10008002 3300025904 Bacteria 7602
107 Ga0207707_10112006 3300025912 Bacteria 2386
108 Ga0207671_10148534 3300025914 Bacteria 1810
109 Ga0207660_10075409 3300025917 Bacteria 2464
110 Ga0207657_10011059 3300025919 Bacteria 8971
111 Ga0207646_10040692 3300025922 Bacteria 4179
112 Ga0207681_10092422 3300025923 Bacteria 2163
113 Ga0207690_10102846 3300025932 Bacteria 2044
114 Ga0207665_10058493 3300025939 Bacteria 2606
115 Ga0207679_10088593 3300025945 Bacteria 2387
116 Ga0207667_10069956 3300025949 Bacteria 3653
117 Ga0207667_10168215 3300025949 Bacteria 2253
118 Ga0207668_10000886 3300025972 Bacteria 18050
119 Ga0207668_10039739 3300025972 Bacteria 3170
120 Ga0207639_10050087 3300026041 Bacteria 3170
121 Ga0207678_10000561 3300026067 Bacteria 33981
122 Ga0207708_10125742 3300026075 Bacteria 2001
123 Ga0207674_10022892 3300026116 Bacteria 6704
124 Ga0207683_10023911 3300026121 Bacteria 5257
125 Ga0207698_10148907 3300026142 Bacteria 2028
126 Ga0209371_1000018 3300027312 Bacteria 614700
127 Ga0209371_1005304 3300027312 Bacteria 5183
128 Ga0265354_1003610 3300028016 Bacteria 1711
129 Ga0268266_10071577 3300028379 Bacteria 3005
130 Ga0268266_10317242 3300028379 Bacteria 1458
131 Ga0268256_1000016 3300030500 Bacteria 614700
132 Ga0268256_1004465 3300030500 Bacteria 5790
133 Ga0316183_1020786 3300030742 Bacteria 5685
134 Ga0316182_1400016 3300030745 Bacteria 1816
135 Ga0265770_1000674 3300030878 Bacteria 4757
136 Ga0265760_10002180 3300031090 Bacteria 5732
137 Ga0265339_10050456 3300031249 Bacteria 2276
138 Ga0307412_10001110 3300031911 Bacteria 15423
139 Ga0307414_10006401 3300032004 Bacteria 6564
140 Ga0307414_10022331 3300032004 Bacteria 3989
141 Ga0307414_10040755 3300032004 Bacteria 3139
142 Ga0373925_0309452 3300037068 Bacteria 1277
143 Ga0395899_0048041 3300037312 Bacteria 3176
144 Ga0395900_0018958 3300037418 Bacteria 7018
145 Ga0395898_0001791 3300037466 Bacteria 27917
146 Ga0395898_0114723 3300037466 Bacteria 2581
147 Ga0237816_00561 3300039145 Bacteria 3145
148 Ga0439432_005649 3300042006 Bacteria 4498
149 Ga0439449_0010945 3300042007 Bacteria 3423
150 Ga0439456_020702 3300042013 Unclassified 1388
151 Ga0450911_000408 3300042115 Bacteria 14198
152 Ga0439446_0030791 3300042156 Bacteria 1551
153 Ga0451577_0088789 3300042876 Bacteria 2758
154 Ga0453683_0045922 3300044673 Bacteria 2739
155 Ga0451576_0002278 3300045051 Bacteria 29296
156 Ga0495627_000062 3300046453 Bacteria 138772
157 Ga0495627_034899 3300046453 Bacteria 1569
158 Ga0495638_0001147 3300046460 Bacteria 25579
159 Ga0495638_0082620 3300046460 Bacteria 1948
160 Ga0495650_0051313 3300046471 Bacteria 1700
161 Ga0495610_0006633 3300046512 Bacteria 7902
162 Ga0495631_0001424 3300046518 Bacteria 14532
163 Ga0495631_0005378 3300046518 Bacteria 6713
164 Ga0495632_0003969 3300046519 Bacteria 10261
165 Ga0495632_0101029 3300046519 Bacteria 1359
166 Ga0495643_0000431 3300046522 Bacteria 54537
167 Ga0495663_0001814 3300046525 Bacteria 6599
168 Ga0495663_0004154 3300046525 Bacteria 4096
169 Ga0495663_0005192 3300046525 Bacteria 3625
170 Ga0495654_0000192 3300046530 Bacteria 59720
171 Ga0495609_0045612 3300046538 Bacteria 1964
172 Ga0495633_0000416 3300046558 Bacteria 44195
173 Ga0495633_0016666 3300046558 Bacteria 3781
174 Ga0495633_0034602 3300046558 Bacteria 2428
175 Ga0495625_0062707 3300046660 Bacteria 2626
176 Ga0495624_0068161 3300046690 Unclassified 2218
177 Ga0495671_0003072 3300046692 Bacteria 10368
178 Ga0495674_0006492 3300047319 Bacteria 11216
179 Ga0495672_0000069 3300047320 Bacteria 189627
180 Ga0495672_0002204 3300047320 Bacteria 18139
181 Ga0495672_0075866 3300047320 Bacteria 1890
182 Ga0495676_0001089 3300047321 Bacteria 22987
183 Ga0495675_0229051 3300047444 Bacteria 1122
184 Ga0495686_0000017 3300047472 Bacteria 435554
185 Ga0495686_0009193 3300047472 Bacteria 7153
186 Ga0496100_0001182 3300048903 Bacteria 12715
187 Ga0496101_0043738 3300048904 Bacteria 3202
188 Ga0496101_0099873 3300048904 Bacteria 2170
189 Ga0496102_0075411 3300048905 Bacteria 3101
190 Ga0496103_0035885 3300048906 Bacteria 3035
191 Ga0496104_0112484 3300048907 Bacteria 2611
192 Ga0496104_0279311 3300048907 Bacteria 1583
193 Ga0496105_0053467 3300048908 Bacteria 3335
194 Ga0496106_0026615 3300048909 Bacteria 4307
195 Ga0496106_0076829 3300048909 Bacteria 2560
196 Ga0496106_0106748 3300048909 Bacteria 2177
197 Ga0496107_0077729 3300048910 Unclassified 2417
198 Ga0496113_0065060 3300048916 Bacteria 2759
199 Ga0496114_0001084 3300048917 Bacteria 20508
200 Ga0496115_0068836 3300048918 Bacteria 2866
201 Ga0496116_0001076 3300048919 Bacteria 32848
202 Ga0496116_0011744 3300048919 Bacteria 7215
203 Ga0496116_0051097 3300048919 Bacteria 2748
204 Ga0496116_0068847 3300048919 Bacteria 2253
205 Ga0496117_0000176 3300048920 Bacteria 131822
206 Ga0496117_0002092 3300048920 Bacteria 26276
207 Ga0496117_0004497 3300048920 Bacteria 15331
208 Ga0496117_0004512 3300048920 Bacteria 15295
209 Ga0496117_0052586 3300048920 Bacteria 2868
210 Ga0496117_0144972 3300048920 Bacteria 1415
211 Ga0496118_0000108 3300048921 Bacteria 153902
212 Ga0496118_0000436 3300048921 Bacteria 69107
213 Ga0496118_0002418 3300048921 Bacteria 25175
214 Ga0496118_0002476 3300048921 Bacteria 24790
215 Ga0496118_0003829 3300048921 Bacteria 18513
216 Ga0496118_0018579 3300048921 Bacteria 6262
217 Ga0496118_0108643 3300048921 Bacteria 1848
218 Ga0496119_0000587 3300048922 Bacteria 49190
219 Ga0496119_0061174 3300048922 Bacteria 2251
220 Ga0496120_0003902 3300048923 Bacteria 13040
221 Ga0496120_0023675 3300048923 Bacteria 3840
222 Ga0496121_0000045 3300048924 Bacteria 336130
223 Ga0496121_0003767 3300048924 Bacteria 21194
224 Ga0496121_0004576 3300048924 Bacteria 18444
225 Ga0496121_0067950 3300048924 Bacteria 2886
226 Ga0496121_0096868 3300048924 Plasmid 2288
227 Ga0496121_0213870 3300048924 Bacteria 1363
228 Ga0496122_0000079 3300048925 Bacteria 212416
229 Ga0496122_0017195 3300048925 Bacteria 6777
230 Ga0496122_0022475 3300048925 Bacteria 5604
231 Ga0496122_0065649 3300048925 Bacteria 2629
232 Ga0496122_0073150 3300048925 Bacteria 2432
233 Ga0496122_0160077 3300048925 Bacteria 1374
234 Ga0496123_0000073 3300048926 Bacteria 198307
235 Ga0496123_0007499 3300048926 Bacteria 10250
236 Ga0496123_0009088 3300048926 Bacteria 8998
237 Ga0496123_0014117 3300048926 Bacteria 6644
238 Ga0496123_0053842 3300048926 Bacteria 2655
239 Ga0496123_0097249 3300048926 Bacteria 1725
240 Ga0496124_0000486 3300048927 Bacteria 68189
241 Ga0496124_0005022 3300048927 Bacteria 15128
242 Ga0496124_0012914 3300048927 Bacteria 8193
243 Ga0496124_0031528 3300048927 Bacteria 4691
244 Ga0496124_0056200 3300048927 Bacteria 3320
245 Ga0496124_0168168 3300048927 Bacteria 1701
246 Ga0496125_0000486 3300048928 Bacteria 69727
247 Ga0496125_0003002 3300048928 Bacteria 21117
248 Ga0496125_0013755 3300048928 Bacteria 7931
249 Ga0496125_0038490 3300048928 Bacteria 4137
250 Ga0496125_0055133 3300048928 Bacteria 3241
251 Ga0496125_0063442 3300048928 Bacteria 2946
252 Ga0496125_0069466 3300048928 Bacteria 2764
253 Ga0496125_0093273 3300048928 Bacteria 2247
254 Ga0496126_0001975 3300048929 Bacteria 29049
255 Ga0496126_0023725 3300048929 Bacteria 5940
256 Ga0496126_0054313 3300048929 Bacteria 3629
257 Ga0496126_0112636 3300048929 Bacteria 2369
258 Ga0496126_0201175 3300048929 Bacteria 1682
259 Ga0496126_0445597 3300048929 Bacteria 1043
260 Ga0501032_0011234 3300049569 Bacteria 6431
261 Ga0501033_0004154 3300049570 Bacteria 11665
262 Ga0501033_0078952 3300049570 Bacteria 2415
263 Ga0501033_0329890 3300049570 Bacteria 1071
264 Ga0501034_0000014 3300049571 Bacteria 297798
265 Ga0501034_0000637 3300049571 Bacteria 54474
266 Ga0501034_0026742 3300049571 Bacteria 5871
267 Ga0501034_0196743 3300049571 Bacteria 1975
268 Ga0501034_0236424 3300049571 Bacteria 1774
269 Ga0501036_0006220 3300049572 Bacteria 9684
270 Ga0501037_0016094 3300049573 Bacteria 5503
271 Ga0501037_0017560 3300049573 Bacteria 5266
272 Ga0501037_0033979 3300049573 Bacteria 3765
273 Ga0501038_0025899 3300049574 Bacteria 5224
274 Ga0501038_0085512 3300049574 Bacteria 2652
275 Ga0501038_0111895 3300049574 Bacteria 2261
276 Ga0501039_0000289 3300049575 Bacteria 35699
277 Ga0501039_0008244 3300049575 Bacteria 7941
278 Ga0501043_0000599 3300049579 Bacteria 31878
279 Ga0501046_0011539 3300049580 Bacteria 7554
280 Ga0501046_0013340 3300049580 Bacteria 6962
281 Ga0501047_0000291 3300049581 Bacteria 57615
282 Ga0501047_0006857 3300049581 Bacteria 10702
283 Ga0501047_0010076 3300049581 Bacteria 8934
284 Ga0501047_0053091 3300049581 Bacteria 3918
285 Ga0501047_0554200 3300049581 Bacteria 974
286 Ga0501048_0016061 3300049582 Bacteria 5521
287 Ga0501048_0028952 3300049582 Bacteria 4020
288 Ga0501067_0005214 3300049583 Bacteria 7225
289 Ga0501067_0005695 3300049583 Bacteria 6919
290 Ga0501067_0093680 3300049583 Bacteria 1668
291 Ga0501069_0002236 3300049585 Bacteria 9756
292 Ga0501070_0004247 3300049586 Bacteria 12319
293 Ga0501073_0000201 3300049589 Bacteria 39533
294 Ga0501073_0058848 3300049589 Bacteria 2685
295 Ga0501074_0003786 3300049590 Bacteria 10746
296 Ga0501080_0000010 3300049742 Bacteria 115062
297 Ga0501080_0002567 3300049742 Bacteria 15911
298 Ga0501083_0006761 3300049744 Bacteria 8140
299 Ga0501035_0000034 3300049822 Bacteria 174589
300 Ga0501035_0003474 3300049822 Bacteria 15082
301 Ga0501035_0003651 3300049822 Bacteria 14672
302 Ga0501035_0022436 3300049822 Bacteria 5797
303 Ga0501035_0053828 3300049822 Bacteria 3597
304 Ga0501035_0131322 3300049822 Bacteria 2183
305 Ga0501035_0225612 3300049822 Bacteria 1598
306 Ga0501044_0000039 3300049823 Bacteria 158218
307 Ga0501044_0000132 3300049823 Bacteria 91574
308 Ga0501044_0004297 3300049823 Bacteria 15978
309 Ga0501044_0107989 3300049823 Bacteria 2794
310 Ga0501045_0158104 3300049824 Bacteria 1686
311 nmdc:mga00v17_138103_c1 3300050491 Bacteria 1561
312 nmdc:mga00v17_41172_c2 3300050491 Bacteria 1140
313 nmdc:mga0yw44_161836_c1 3300050492 Bacteria 1465
314 Ga0500626_009348 3300053128 Bacteria 4074
315 Ga0500590_042065 3300053148 Bacteria 2347
316 Ga0500619_000305 3300053154 Bacteria 9700
317 Ga0500565_000251 3300053734 Bacteria 2719
318 Ga0501084_0011111 3300054114 Bacteria 7456
319 Ga0501082_0028915 3300060353 Bacteria 4775
320 Ga0501082_0052988 3300060353 Bacteria 3498
321 Ga0501082_0097489 3300060353 Bacteria 2541

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300049571 Ga0501034_0026742 Ga0501034_0026742_1009_1947 268
2 3300060353 Ga0501082_0052988 Ga0501082_0052988_2654_3481 269
3 3300042007 Ga0439449_0010945 Ga0439449_0010945_1084_2022 277
4 3300037068 Ga0373925_0309452 Ga0373925_0309452_261_1181 278
5 3300003856 Ga0058692_1000004 Ga0058692_1000004296 279
6 3300025939 Ga0207665_10058493 Ga0207665_100584931 279
7 3300027312 Ga0209371_1000018 Ga0209371_1000018105 279
8 3300030500 Ga0268256_1000016 Ga0268256_1000016105 279
9 iso_pu_bacteria 641736151 642425868 279
10 3300025231 Ga0207427_100484 Ga0207427_10048420 283
11 3300025261 Ga0209233_1000204 Ga0209233_100020481 283
12 3300048919 Ga0496116_0068847 Ga0496116_0068847_1371_2240 283
13 3300048917 Ga0496114_0001084 Ga0496114_0001084_1036_1965 287
14 3300048929 Ga0496126_0054313 Ga0496126_0054313_2200_3129 287
15 3300048920 Ga0496117_0000176 Ga0496117_0000176_67225_68163 290
16 3300048921 Ga0496118_0000436 Ga0496118_0000436_1120_2058 290
17 3300048927 Ga0496124_0031528 Ga0496124_0031528_3308_4246 290
18 3300032004 Ga0307414_10022331 Ga0307414_100223314 292
19 3300003578 Ga0006562J51391_1046708 Ga0006562J51391_10467084 296
20 3300003578 Ga0006562J51391_1046712 Ga0006562J51391_10467121 296
21 3300005468 Ga0070707_100049841 Ga0070707_1000498413 298
22 3300025922 Ga0207646_10040692 Ga0207646_100406923 298
23 iso_pu_bacteria 2842694124 2842695998 301
24 iso_pu_bacteria 2903768456 2903771826 301
25 iso_pu_bacteria 2513237098 2513675097 302
26 iso_pu_bacteria 2547132130 2547499968 302
27 iso_pu_bacteria 2576861471 2578456486 302
28 iso_pu_bacteria 2643221579 2643907389 302
29 iso_pu_bacteria 2643221581 2643914339 302
30 iso_pu_bacteria 2687453130 2687583513 302
31 iso_pu_bacteria 2721755763 2723876535 302
32 iso_pu_bacteria 2747842501 2748018486 302
33 iso_pu_bacteria 2765235840 2765581018 302
34 iso_pu_bacteria 2816332141 2816517984 302
35 iso_pu_bacteria 2842391507 2842394051 302
36 iso_pu_bacteria 2842757796 2842761306 302
37 iso_pu_bacteria 2852649853 2852651726 302
38 iso_pu_bacteria 2857442823 2857444532 302
39 iso_pu_bacteria 2874220319 2874223671 302
40 iso_pu_bacteria 2919089067 2919089218 302
41 iso_pu_bacteria 2919134579 2919136538 302
42 iso_pu_bacteria 2923516293 2923516764 302
43 iso_pu_bacteria 2928496128 2928500413 302
44 iso_pu_bacteria 2931380184 2931382926 302
45 iso_pu_bacteria 2937610967 2937613859 302
46 iso_pu_bacteria 2939589442 2939590279 302
47 iso_pu_bacteria 2939622612 2939623899 302
48 iso_pu_bacteria 2939626828 2939628566 302
49 iso_pu_bacteria 2941475908 2941479446 302
50 iso_pu_bacteria 2961047084 2961050435 302
51 iso_pu_bacteria 2961064222 2961064420 302
52 iso_pu_bacteria 2974307012 2974307139 302
53 iso_pu_bacteria 2977247770 2977247884 302
54 iso_pu_bacteria 2984514374 2984517660 302
55 iso_pu_bacteria 2987605356 2987606852 302
56 3300049571 Ga0501034_0000014 Ga0501034_0000014_96199_97113 303
57 3300049573 Ga0501037_0033979 Ga0501037_0033979_1027_1941 303
58 3300049574 Ga0501038_0111895 Ga0501038_0111895_1107_2021 303
59 3300049575 Ga0501039_0000289 Ga0501039_0000289_13723_14637 303
60 3300049581 Ga0501047_0000291 Ga0501047_0000291_15907_16821 303
61 3300049581 Ga0501047_0554200 Ga0501047_0554200_20_937 303
62 3300049583 Ga0501067_0005695 Ga0501067_0005695_2895_3809 303
63 3300049589 Ga0501073_0058848 Ga0501073_0058848_1375_2289 303
64 3300049742 Ga0501080_0000010 Ga0501080_0000010_107359_108273 303
65 3300049822 Ga0501035_0000034 Ga0501035_0000034_123784_124698 303
66 3300049823 Ga0501044_0000039 Ga0501044_0000039_120721_121635 303
67 3300049824 Ga0501045_0158104 Ga0501045_0158104_420_1334 303
68 3300053148 Ga0500590_042065 Ga0500590_042065_370_1317 303
69 3300053154 Ga0500619_000305 Ga0500619_000305_5475_6422 303
70 3300060353 Ga0501082_0028915 Ga0501082_0028915_1679_2593 303
71 iso_pu_bacteria 2512564013 2512636621 303
72 iso_pu_bacteria 2857460504 2857462922 303
73 iso_pu_bacteria 2857465823 2857467793 303
74 iso_pu_bacteria 2857591370 2857594679 303
75 iso_pu_bacteria 2884338543 2884341350 303
76 iso_pu_bacteria 2915597211 2915597342 303
77 iso_pu_bacteria 2915606848 2915611449 303
78 iso_pu_bacteria 2919513703 2919513980 303
79 iso_pu_bacteria 2919675420 2919676218 303
80 iso_pu_bacteria 2929183550 2929188796 303
81 iso_pu_bacteria 2941471342 2941472807 303
82 3300013306 Ga0163162_10197522 Ga0163162_101975222 304
83 3300028016 Ga0265354_1003610 Ga0265354_10036101 304
84 3300030878 Ga0265770_1000674 Ga0265770_10006744 304
85 3300031090 Ga0265760_10002180 Ga0265760_100021804 304
86 3300048904 Ga0496101_0043738 Ga0496101_0043738_1274_2191 304
87 3300048909 Ga0496106_0076829 Ga0496106_0076829_268_1185 304
88 3300049570 Ga0501033_0078952 Ga0501033_0078952_914_1834 304
89 3300049573 Ga0501037_0017560 Ga0501037_0017560_2351_3271 304
90 3300049574 Ga0501038_0085512 Ga0501038_0085512_327_1247 304
91 3300049822 Ga0501035_0131322 Ga0501035_0131322_1129_2049 304
92 iso_pu_bacteria 2510917027 2511181149 304
93 3300037418 Ga0395900_0018958 Ga0395900_0018958_1946_2866 305
94 3300037466 Ga0395898_0114723 Ga0395898_0114723_67_987 305
95 3300003323 rootH1_10094560 rootH1_100945603 306
96 3300003771 Ga0055526_1001691 Ga0055526_100169112 306
97 3300003773 Ga0055537_1001178 Ga0055537_10011784 306
98 3300003781 Ga0055536_1000800 Ga0055536_10008008 306
99 3300003790 Ga0055528_1000205 Ga0055528_100020513 306
100 3300003791 Ga0055530_10000466 Ga0055530_1000046620 306
101 3300003791 Ga0055530_10000918 Ga0055530_100009183 306
102 3300005289 Ga0065704_10073116 Ga0065704_100731163 306
103 3300005347 Ga0070668_100054398 Ga0070668_1000543981 306
104 3300005436 Ga0070713_100330075 Ga0070713_1003300752 306
105 3300005456 Ga0070678_100003465 Ga0070678_1000034652 306
106 3300006048 Ga0075363_100074497 Ga0075363_1000744972 306
107 3300006051 Ga0075364_10053328 Ga0075364_100533283 306
108 3300006051 Ga0075364_10122473 Ga0075364_101224731 306
109 3300006914 Ga0075436_100114642 Ga0075436_1001146423 306
110 3300009011 Ga0105251_10004152 Ga0105251_100041528 306
111 3300009036 Ga0105244_10012689 Ga0105244_100126893 306
112 3300009036 Ga0105244_10068224 Ga0105244_100682242 306
113 3300010375 Ga0105239_10035000 Ga0105239_100350004 306
114 3300013102 Ga0157371_10000158 Ga0157371_1000015864 306
115 3300013102 Ga0157371_10009111 Ga0157371_100091112 306
116 3300013105 Ga0157369_10068091 Ga0157369_100680911 306
117 3300014497 Ga0182008_10000063 Ga0182008_1000006336 306
118 3300014497 Ga0182008_10034977 Ga0182008_100349773 306
119 3300015261 Ga0182006_1005330 Ga0182006_10053305 306
120 3300015261 Ga0182006_1007487 Ga0182006_10074874 306
121 3300015261 Ga0182006_1014381 Ga0182006_10143813 306
122 3300015262 Ga0182007_10000019 Ga0182007_1000001980 306
123 3300015265 Ga0182005_1000239 Ga0182005_10002396 306
124 3300015685 Ga0183369_1008 Ga0183369_1008107 306
125 3300017792 Ga0163161_10019733 Ga0163161_100197333 306
126 3300017792 Ga0163161_10061348 Ga0163161_100613482 306
127 3300025261 Ga0209233_1000322 Ga0209233_100032239 306
128 3300025263 Ga0209565_1000051 Ga0209565_100005117 306
129 3300025273 Ga0209673_1000581 Ga0209673_10005815 306
130 3300025291 Ga0209675_1000007 Ga0209675_1000007117 306
131 3300025292 Ga0209676_1000018 Ga0209676_1000018428 306
132 3300025292 Ga0209676_1000035 Ga0209676_100003558 306
133 3300025292 Ga0209676_1000143 Ga0209676_100014372 306
134 3300025295 Ga0209564_1000533 Ga0209564_100053351 306
135 3300025298 Ga0209050_1000109 Ga0209050_1000109139 306
136 3300025298 Ga0209050_1000448 Ga0209050_100044810 306
137 3300025299 Ga0209256_1006264 Ga0209256_10062644 306
138 3300025303 Ga0209051_1001121 Ga0209051_100112114 306
139 3300025304 Ga0209257_1000035 Ga0209257_1000035428 306
140 3300025304 Ga0209257_1003791 Ga0209257_100379112 306
141 3300025735 Ga0207713_1007798 Ga0207713_10077988 306
142 3300025923 Ga0207681_10092422 Ga0207681_100924222 306
143 3300025972 Ga0207668_10000886 Ga0207668_1000088619 306
144 3300026121 Ga0207683_10023911 Ga0207683_100239115 306
145 3300028379 Ga0268266_10071577 Ga0268266_100715772 306
146 3300028379 Ga0268266_10317242 Ga0268266_103172422 306
147 3300030742 Ga0316183_1020786 Ga0316183_10207863 306
148 3300030745 Ga0316182_1400016 Ga0316182_14000162 306
149 3300031911 Ga0307412_10001110 Ga0307412_1000111014 306
150 3300032004 Ga0307414_10006401 Ga0307414_100064016 306
151 3300032004 Ga0307414_10040755 Ga0307414_100407552 306
152 3300039145 Ga0237816_00561 Ga0237816_00561_1080_2018 306
153 3300042006 Ga0439432_005649 Ga0439432_005649_1279_2217 306
154 3300042115 Ga0450911_000408 Ga0450911_000408_13105_14043 306
155 3300042876 Ga0451577_0088789 Ga0451577_0088789_1786_2706 306
156 3300044673 Ga0453683_0045922 Ga0453683_0045922_1647_2567 306
157 3300046453 Ga0495627_034899 Ga0495627_034899_360_1298 306
158 3300046460 Ga0495638_0001147 Ga0495638_0001147_23598_24536 306
159 3300046460 Ga0495638_0082620 Ga0495638_0082620_32_970 306
160 3300046512 Ga0495610_0006633 Ga0495610_0006633_423_1361 306
161 3300046518 Ga0495631_0001424 Ga0495631_0001424_314_1252 306
162 3300046525 Ga0495663_0001814 Ga0495663_0001814_77_1015 306
163 3300046525 Ga0495663_0004154 Ga0495663_0004154_1296_2234 306
164 3300046525 Ga0495663_0005192 Ga0495663_0005192_2325_3263 306
165 3300046538 Ga0495609_0045612 Ga0495609_0045612_456_1394 306
166 3300046558 Ga0495633_0000416 Ga0495633_0000416_42831_43769 306
167 3300046558 Ga0495633_0016666 Ga0495633_0016666_385_1323 306
168 3300046558 Ga0495633_0034602 Ga0495633_0034602_1346_2284 306
169 3300046660 Ga0495625_0062707 Ga0495625_0062707_1312_2250 306
170 3300047320 Ga0495672_0075866 Ga0495672_0075866_247_1185 306
171 3300047472 Ga0495686_0009193 Ga0495686_0009193_572_1510 306
172 3300048907 Ga0496104_0279311 Ga0496104_0279311_576_1514 306
173 3300048908 Ga0496105_0053467 Ga0496105_0053467_2309_3247 306
174 3300048909 Ga0496106_0106748 Ga0496106_0106748_111_1049 306
175 3300048916 Ga0496113_0065060 Ga0496113_0065060_1119_2057 306
176 3300048919 Ga0496116_0001076 Ga0496116_0001076_159_1097 306
177 3300048919 Ga0496116_0011744 Ga0496116_0011744_6262_7200 306
178 3300048919 Ga0496116_0051097 Ga0496116_0051097_1368_2306 306
179 3300048920 Ga0496117_0002092 Ga0496117_0002092_1731_2669 306
180 3300048920 Ga0496117_0004497 Ga0496117_0004497_310_1248 306
181 3300048920 Ga0496117_0004512 Ga0496117_0004512_14109_15047 306
182 3300048920 Ga0496117_0144972 Ga0496117_0144972_370_1308 306
183 3300048921 Ga0496118_0000108 Ga0496118_0000108_28600_29538 306
184 3300048921 Ga0496118_0003829 Ga0496118_0003829_16933_17871 306
185 3300048921 Ga0496118_0108643 Ga0496118_0108643_132_1070 306
186 3300048922 Ga0496119_0000587 Ga0496119_0000587_434_1372 306
187 3300048922 Ga0496119_0061174 Ga0496119_0061174_99_1037 306
188 3300048923 Ga0496120_0003902 Ga0496120_0003902_417_1355 306
189 3300048923 Ga0496120_0023675 Ga0496120_0023675_1189_2127 306
190 3300048924 Ga0496121_0003767 Ga0496121_0003767_997_1935 306
191 3300048924 Ga0496121_0004576 Ga0496121_0004576_7488_8426 306
192 3300048924 Ga0496121_0067950 Ga0496121_0067950_1002_1940 306
193 3300048924 Ga0496121_0213870 Ga0496121_0213870_95_1033 306
194 3300048925 Ga0496122_0000079 Ga0496122_0000079_144231_145169 306
195 3300048925 Ga0496122_0017195 Ga0496122_0017195_3397_4335 306
196 3300048925 Ga0496122_0022475 Ga0496122_0022475_3449_4387 306
197 3300048925 Ga0496122_0065649 Ga0496122_0065649_1472_2410 306
198 3300048925 Ga0496122_0160077 Ga0496122_0160077_243_1181 306
199 3300048926 Ga0496123_0000073 Ga0496123_0000073_64307_65245 306
200 3300048926 Ga0496123_0007499 Ga0496123_0007499_1263_2201 306
201 3300048926 Ga0496123_0009088 Ga0496123_0009088_6602_7540 306
202 3300048926 Ga0496123_0014117 Ga0496123_0014117_5681_6619 306
203 3300048926 Ga0496123_0053842 Ga0496123_0053842_1409_2347 306
204 3300048926 Ga0496123_0097249 Ga0496123_0097249_452_1390 306
205 3300048927 Ga0496124_0000486 Ga0496124_0000486_66437_67375 306
206 3300048927 Ga0496124_0005022 Ga0496124_0005022_13639_14577 306
207 3300048927 Ga0496124_0012914 Ga0496124_0012914_5992_6930 306
208 3300048927 Ga0496124_0056200 Ga0496124_0056200_427_1365 306
209 3300048928 Ga0496125_0000486 Ga0496125_0000486_2013_2951 306
210 3300048928 Ga0496125_0003002 Ga0496125_0003002_216_1154 306
211 3300048928 Ga0496125_0013755 Ga0496125_0013755_248_1186 306
212 3300048928 Ga0496125_0038490 Ga0496125_0038490_3051_3989 306
213 3300048928 Ga0496125_0055133 Ga0496125_0055133_595_1533 306
214 3300048928 Ga0496125_0063442 Ga0496125_0063442_56_994 306
215 3300048928 Ga0496125_0069466 Ga0496125_0069466_1748_2686 306
216 3300048928 Ga0496125_0093273 Ga0496125_0093273_1032_1970 306
217 3300048929 Ga0496126_0001975 Ga0496126_0001975_255_1193 306
218 3300048929 Ga0496126_0112636 Ga0496126_0112636_894_1832 306
219 3300048929 Ga0496126_0201175 Ga0496126_0201175_567_1505 306
220 3300049571 Ga0501034_0000637 Ga0501034_0000637_36472_37401 306
221 3300049582 Ga0501048_0028952 Ga0501048_0028952_1848_2786 306
222 3300049822 Ga0501035_0053828 Ga0501035_0053828_1905_2843 306
223 3300049822 Ga0501035_0225612 Ga0501035_0225612_57_995 306
224 3300049823 Ga0501044_0107989 Ga0501044_0107989_1647_2585 306
225 3300053128 Ga0500626_009348 Ga0500626_009348_2086_3024 306
226 3300053734 Ga0500565_000251 Ga0500565_000251_1021_1959 306
227 3300003763 Ga0055529_1001199 Ga0055529_10011995 307
228 3300003792 Ga0055540_1004549 Ga0055540_10045496 307
229 3300003794 Ga0055531_10000494 Ga0055531_1000049416 307
230 3300005336 Ga0070680_100001300 Ga0070680_10000130013 307
231 3300005337 Ga0070682_100007542 Ga0070682_1000075425 307
232 3300005366 Ga0070659_100086640 Ga0070659_1000866404 307
233 3300005440 Ga0070705_100007674 Ga0070705_1000076742 307
234 3300005455 Ga0070663_100002113 Ga0070663_1000021134 307
235 3300005458 Ga0070681_10002018 Ga0070681_1000201819 307
236 3300005539 Ga0068853_100028689 Ga0068853_1000286893 307
237 3300005545 Ga0070695_100002725 Ga0070695_1000027252 307
238 3300005545 Ga0070695_100055324 Ga0070695_1000553241 307
239 3300005547 Ga0070693_100026858 Ga0070693_1000268584 307
240 3300005549 Ga0070704_100040491 Ga0070704_1000404913 307
241 3300005563 Ga0068855_100004317 Ga0068855_1000043172 307
242 3300005563 Ga0068855_100108272 Ga0068855_1001082724 307
243 3300005564 Ga0070664_100057274 Ga0070664_1000572742 307
244 3300005614 Ga0068856_100042495 Ga0068856_1000424954 307
245 3300005840 Ga0068870_10058948 Ga0068870_100589483 307
246 3300006051 Ga0075364_10198015 Ga0075364_101980152 307
247 3300009093 Ga0105240_10167830 Ga0105240_101678302 307
248 3300009148 Ga0105243_10024400 Ga0105243_100244005 307
249 3300009545 Ga0105237_10047178 Ga0105237_100471784 307
250 3300009551 Ga0105238_10023210 Ga0105238_100232108 307
251 3300013104 Ga0157370_10008298 Ga0157370_1000829811 307
252 3300013104 Ga0157370_10065936 Ga0157370_100659363 307
253 3300013104 Ga0157370_10074090 Ga0157370_100740902 307
254 3300013308 Ga0157375_10093420 Ga0157375_100934204 307
255 3300014325 Ga0163163_10456563 Ga0163163_104565632 307
256 3300014968 Ga0157379_10122484 Ga0157379_101224843 307
257 3300025228 Ga0209672_103877 Ga0209672_1038772 307
258 3300025272 Ga0209455_1000462 Ga0209455_100046218 307
259 3300025273 Ga0209673_1019027 Ga0209673_10190272 307
260 3300025303 Ga0209051_1000196 Ga0209051_100019634 307
261 3300025303 Ga0209051_1002828 Ga0209051_100282813 307
262 3300025304 Ga0209257_1000305 Ga0209257_100030585 307
263 3300025912 Ga0207707_10112006 Ga0207707_101120064 307
264 3300025914 Ga0207671_10148534 Ga0207671_101485342 307
265 3300025917 Ga0207660_10075409 Ga0207660_100754093 307
266 3300025919 Ga0207657_10011059 Ga0207657_100110596 307
267 3300025932 Ga0207690_10102846 Ga0207690_101028461 307
268 3300025945 Ga0207679_10088593 Ga0207679_100885933 307
269 3300025949 Ga0207667_10069956 Ga0207667_100699563 307
270 3300025949 Ga0207667_10168215 Ga0207667_101682152 307
271 3300025972 Ga0207668_10039739 Ga0207668_100397393 307
272 3300026041 Ga0207639_10050087 Ga0207639_100500874 307
273 3300026067 Ga0207678_10000561 Ga0207678_1000056125 307
274 3300026075 Ga0207708_10125742 Ga0207708_101257422 307
275 3300026116 Ga0207674_10022892 Ga0207674_100228921 307
276 3300026142 Ga0207698_10148907 Ga0207698_101489072 307
277 3300031249 Ga0265339_10050456 Ga0265339_100504562 307
278 3300042013 Ga0439456_020702 Ga0439456_020702_360_1310 307
279 3300042156 Ga0439446_0030791 Ga0439446_0030791_478_1428 307
280 3300045051 Ga0451576_0002278 Ga0451576_0002278_26787_27710 307
281 3300046453 Ga0495627_000062 Ga0495627_000062_21377_22327 307
282 3300046471 Ga0495650_0051313 Ga0495650_0051313_544_1488 307
283 3300046518 Ga0495631_0005378 Ga0495631_0005378_4801_5751 307
284 3300046519 Ga0495632_0003969 Ga0495632_0003969_4795_5745 307
285 3300046519 Ga0495632_0101029 Ga0495632_0101029_105_1049 307
286 3300046530 Ga0495654_0000192 Ga0495654_0000192_43342_44292 307
287 3300046692 Ga0495671_0003072 Ga0495671_0003072_7063_8007 307
288 3300047320 Ga0495672_0002204 Ga0495672_0002204_10619_11569 307
289 3300047444 Ga0495675_0229051 Ga0495675_0229051_24_965 307
290 3300047472 Ga0495686_0000017 Ga0495686_0000017_63081_64016 307
291 3300048903 Ga0496100_0001182 Ga0496100_0001182_10407_11339 307
292 3300048904 Ga0496101_0099873 Ga0496101_0099873_737_1669 307
293 3300048905 Ga0496102_0075411 Ga0496102_0075411_780_1715 307
294 3300048906 Ga0496103_0035885 Ga0496103_0035885_1389_2321 307
295 3300048907 Ga0496104_0112484 Ga0496104_0112484_731_1663 307
296 3300048909 Ga0496106_0026615 Ga0496106_0026615_3188_4120 307
297 3300048910 Ga0496107_0077729 Ga0496107_0077729_796_1728 307
298 3300048918 Ga0496115_0068836 Ga0496115_0068836_754_1686 307
299 3300048920 Ga0496117_0052586 Ga0496117_0052586_1876_2811 307
300 3300048921 Ga0496118_0002418 Ga0496118_0002418_12993_13928 307
301 3300048921 Ga0496118_0002476 Ga0496118_0002476_1756_2691 307
302 3300048924 Ga0496121_0000045 Ga0496121_0000045_220651_221586 307
303 3300048925 Ga0496122_0073150 Ga0496122_0073150_184_1119 307
304 3300048929 Ga0496126_0023725 Ga0496126_0023725_3275_4210 307
305 3300048929 Ga0496126_0445597 Ga0496126_0445597_30_965 307
306 3300049569 Ga0501032_0011234 Ga0501032_0011234_301_1266 307
307 3300049570 Ga0501033_0004154 Ga0501033_0004154_3522_4487 307
308 3300049570 Ga0501033_0329890 Ga0501033_0329890_82_1017 307
309 3300049571 Ga0501034_0196743 Ga0501034_0196743_576_1514 307
310 3300049571 Ga0501034_0236424 Ga0501034_0236424_567_1532 307
311 3300049572 Ga0501036_0006220 Ga0501036_0006220_7955_8920 307
312 3300049573 Ga0501037_0016094 Ga0501037_0016094_523_1488 307
313 3300049574 Ga0501038_0025899 Ga0501038_0025899_4155_5120 307
314 3300049575 Ga0501039_0008244 Ga0501039_0008244_1493_2458 307
315 3300049579 Ga0501043_0000599 Ga0501043_0000599_4703_5668 307
316 3300049580 Ga0501046_0011539 Ga0501046_0011539_3496_4461 307
317 3300049580 Ga0501046_0013340 Ga0501046_0013340_5624_6562 307
318 3300049581 Ga0501047_0006857 Ga0501047_0006857_1465_2418 307
319 3300049581 Ga0501047_0010076 Ga0501047_0010076_4704_5669 307
320 3300049581 Ga0501047_0053091 Ga0501047_0053091_33_971 307
321 3300049582 Ga0501048_0016061 Ga0501048_0016061_3722_4687 307
322 3300049583 Ga0501067_0005214 Ga0501067_0005214_1993_2958 307
323 3300049585 Ga0501069_0002236 Ga0501069_0002236_3266_4231 307
324 3300049586 Ga0501070_0004247 Ga0501070_0004247_5628_6593 307
325 3300049589 Ga0501073_0000201 Ga0501073_0000201_32337_33302 307
326 3300049590 Ga0501074_0003786 Ga0501074_0003786_5628_6593 307
327 3300049742 Ga0501080_0002567 Ga0501080_0002567_11681_12646 307
328 3300049744 Ga0501083_0006761 Ga0501083_0006761_963_1928 307
329 3300049822 Ga0501035_0003474 Ga0501035_0003474_1401_2336 307
330 3300049822 Ga0501035_0003651 Ga0501035_0003651_7063_8028 307
331 3300049822 Ga0501035_0022436 Ga0501035_0022436_2010_2945 307
332 3300049823 Ga0501044_0000132 Ga0501044_0000132_45762_46697 307
333 3300049823 Ga0501044_0004297 Ga0501044_0004297_8864_9829 307
334 3300050491 nmdc:mga00v17_41172_c2 nmdc:mga00v17_41172_c2_152_1108 307
335 3300054114 Ga0501084_0011111 Ga0501084_0011111_1126_2091 307
336 3300060353 Ga0501082_0097489 Ga0501082_0097489_1010_1975 307
337 iso_pu_bacteria 2885266251 2885270012 307
338 3300027312 Ga0209371_1005304 Ga0209371_10053042 308
339 3300030500 Ga0268256_1004465 Ga0268256_10044652 308
340 3300048924 Ga0496121_0096868 Ga0496121_0096868_346_1275 308
341 3300049583 Ga0501067_0093680 Ga0501067_0093680_29_976 309
342 3300037312 Ga0395899_0048041 Ga0395899_0048041_402_1349 310
343 3300037466 Ga0395898_0001791 Ga0395898_0001791_25105_26052 310
344 3300048927 Ga0496124_0168168 Ga0496124_0168168_82_1032 310
345 3300050492 nmdc:mga0yw44_161836_c1 nmdc:mga0yw44_161836_c1_244_1215 310
346 3300046522 Ga0495643_0000431 Ga0495643_0000431_46802_47761 311
347 3300047320 Ga0495672_0000069 Ga0495672_0000069_119857_120816 311
348 3300048921 Ga0496118_0018579 Ga0496118_0018579_4107_5096 316
349 3300050491 nmdc:mga00v17_138103_c1 nmdc:mga00v17_138103_c1_405_1397 318
350 iso_pu_bacteria 2904483920 2904490618 328
351 3300006051 Ga0075364_10102861 Ga0075364_101028612 330
352 3300002067 JGI24735J21928_10000876 JGI24735J21928_100008766 332
353 3300003214 JGI25165J46597_1000851 JGI25165J46597_100085125 332
354 3300003758 Ga0055532_1000166 Ga0055532_100016625 332
355 3300003758 Ga0055532_1000192 Ga0055532_100019228 332
356 3300003760 Ga0055527_1000102 Ga0055527_100010232 332
357 3300003761 Ga0055535_1000208 Ga0055535_100020832 332
358 3300003762 Ga0055542_1000248 Ga0055542_100024832 332
359 3300003763 Ga0055529_1000267 Ga0055529_100026732 332
360 3300013105 Ga0157369_10008177 Ga0157369_100081779 332
361 3300025228 Ga0209672_100021 Ga0209672_100021423 332
362 3300025229 Ga0209147_100025 Ga0209147_100025423 332
363 3300025242 Ga0209258_100037 Ga0209258_100037423 332
364 3300025254 Ga0209148_1000049 Ga0209148_1000049423 332
365 3300025272 Ga0209455_1000041 Ga0209455_1000041423 332
366 3300025904 Ga0207647_10008002 Ga0207647_100080023 332
367 3300046690 Ga0495624_0068161 Ga0495624_0068161_576_1574 332
368 3300047319 Ga0495674_0006492 Ga0495674_0006492_9903_10901 332
369 3300047321 Ga0495676_0001089 Ga0495676_0001089_3579_4577 332

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02558

ApbA

Ketopantoate reductase PanE/ApbA

33

187

0.98

PF08546

ApbA_C

Ketopantoate reductase PanE/ApbA C terminal

214

338

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5eow-assembly1.cif.gz_A crystal structure of 6-hydroxynicotinic acid 3-monooxygenase from pseudomonas putida kt2440 0.9232 25 54
5ayv-assembly1.cif.gz_A crystal structure of archaeal ketopantoate reductase complexed with coenzyme a and 2-oxopantoate 0.9208 25 330
1n1p-assembly1.cif.gz_A atomic resolution structure of cholesterol oxidase @ ph 7.4 (streptomyces sp. sa-coo) 0.9198 25 53
3hwr-assembly1.cif.gz_B crystal structure of pane/apba family ketopantoate reductase (yp_299159.1) from ralstonia eutropha jmp134 at 2.15 a resolution 0.9179 25 330
1vg9-assembly3.cif.gz_E the crystal structures of the rep-1 protein in complex with c-terminally truncated rab7 protein 0.9167 26 54
ID Description Score Start End Superfamily
af_Q54HR9_1_452_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9254 25 54 3.50.50.60
5hwsD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9231 25 200 3.40.50.720
5hwsD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.918 25 200 3.40.50.720
1vg9E01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9167 26 54 3.50.50.60
3hn2C01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9083 25 200 3.40.50.720
ID Description Score Start End GO Terms
AF-C6WY77-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.989 25 331 GO:0005737
GO:0008677
GO:0015940
AF-A0A6I2J988-F1-model_v4 deleted 0.9856 211 285
AF-A0A259PDR5-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9805 50 330 GO:0005737
GO:0008677
GO:0015940
AF-A0A318TB96-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9788 25 329 GO:0005737
GO:0008677
GO:0015940
AF-A0A1M3Q9U6-F1-model_v4 2-dehydropantoate 2-reductase (EC 1.1.1.169) (Ketopantoate reductase) 0.9781 25 329 GO:0005737
GO:0008677
GO:0015940

Feature Viewer

pLDDT pTM Quality
91.97 0.88 High
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Predicted Structure (AlphaFold2)

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