F424891

General Info

Members Datasets Scaffolds Average Seq Length
368 229 336 823

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2857504554|2857504589
Length 906
Sequence VVESPAKAKTINKYLGSDYTVLASYGHIRDLPSKDGSVEPDNDFAMSWEVDAKASKRVSDIVDALKKADRLILATDPDREGEAISWHVLEVLNKKKALKDKSIQRVTFNAITKTSVLEAMANPRDVDMELVEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVCLRLIVDRELEIERFKTQEYWTVDADVSAGADPFLARLVKHEGKKLTKFDLNNETSALAAKAAVGAAVFKVAAVEKKPGKRSPAPPFTTSTLQQEAARKLGFSAQRTMQAAQKLYEGIDIGGETVGLITYMRTDGVSVEPEGIAEARSVIGNVYGAPYVPETPRYYKAKAKNAQEAHEAIRPTSLNRNPGSLRLDGDLGRLYELIWKRMIASQMESARIERTTVDLESADGQTGMRATGQVVLFPGYLAVYEEGRDAPDPQSGSGKESDWGDEDSARLPMIEEGASAKVIEARADQHFTEPPPRYSEASLVKKMEELGIGRPSTYASVLTVLRDREYVKMEKQRFVPEDKGRLVTAFLEQFFKRYVEYDFTAALEEQLDLVSDGKLDWKQFLRDFWKDFHAAVGEIAELRTTNVLDALNEALGPHIFPDKGDGSNPRLCPTCGSGQLSLKTGKFGAFIGCSNYPECRYTRQLGVSEGDGEAESSDKELGTNPATGLAVWLKNGRFGPYVEELAAPDSGEKPKRSSLPKGWIASAMDLEKALRLLSLPREVGKHPDDGKVITAGLGRFGPFVLHDGTYANLENADEVFDVGLNRAVAILADKRAGGGRPQRGAATALAEIGNHPEDGKPVRVLSGRFGPYIKHGDTNANVPKGKDPASITMEEAVALIAERAAKGGGKKPAKKAAAPKKAAAKAEGDAPAKKTAAKKPAAKKAAPKKAASKAKVEATSDDGAAPWDDEA

Samples

Sample ID Description Type Environment
1 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
2 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
3 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
4 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
5 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
6 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
7 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
8 2643221583 Caulobacter sp. Root655 Isolate Unclassified
9 2643221584 Caulobacter sp. Root656 Isolate Unclassified
10 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
11 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
12 2643221640 Caulobacter sp. Root342 Isolate Unclassified
13 2643221642 Caulobacter sp. Root343 Isolate Unclassified
14 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
15 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
16 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
17 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
18 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
19 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
20 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
21 2818991435 Caulobacter henricii 536 Isolate Unclassified
22 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
23 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
24 2849560528 Caulobacter zeae 410 Isolate Unclassified
25 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
26 2851153111 Caulobacter radicis 736 Isolate Unclassified
27 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
28 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
29 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
30 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
31 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
32 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
33 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
34 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
35 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
36 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
37 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
38 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
39 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
40 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
41 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
42 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
43 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
44 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
45 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
46 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
47 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
48 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
49 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
50 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
51 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
52 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
53 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
54 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
55 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
56 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
57 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
58 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
59 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
60 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
61 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
62 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
63 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
64 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
65 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
66 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
67 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
68 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
69 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
70 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
71 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
72 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
73 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
74 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
75 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
76 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
77 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
78 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
79 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
80 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
81 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
82 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
83 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
84 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
85 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
86 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
87 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
88 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
89 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
90 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
91 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
92 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
93 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
94 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
95 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
96 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
97 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
98 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
99 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
100 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
101 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
102 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
130 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
131 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
133 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
134 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
135 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
136 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
137 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
138 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
139 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
140 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
141 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
142 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
143 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
144 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
145 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
146 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
147 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
148 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
149 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
150 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
151 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
152 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
153 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
154 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
155 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
156 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
157 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
158 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
159 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
160 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
161 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
162 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
163 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
164 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
165 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
166 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
167 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
168 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
169 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
170 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
171 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
172 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
173 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
174 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
175 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
176 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
177 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
178 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
179 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
180 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
181 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
182 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
183 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
184 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
185 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
186 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
187 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
188 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
189 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
190 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
191 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
192 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
193 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
194 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
195 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
196 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
197 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
198 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
199 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
200 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
201 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
202 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
204 3300049761 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I14_A_4_control Metagenome Rhizosphere
205 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
206 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
207 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
208 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
209 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
210 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
211 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
212 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
213 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
214 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
215 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
216 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
217 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
218 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
219 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
220 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
221 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
222 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
223 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
224 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
225 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
226 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
227 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
228 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
229 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.3
Metatranscriptomes 0
Isolates 8.7

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 17.66
Nodule 0
Rhizoplane 1.36
Rhizosphere 69.29
Stem 0
Stem Tuber 0
Unclassified 11.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10000209 3300003316 Bacteria 12156
2 rootH2_10029927 3300003320 Bacteria 24231
3 rootL2_10002427 3300003322 Bacteria 15148
4 rootL2_10021873 3300003322 Bacteria 13906
5 rootH1_10001325 3300003323 Bacteria 38210
6 rootH1_10010281 3300003323 Bacteria 22319
7 Ga0055524_1003124 3300003775 Bacteria 8175
8 Ga0055530_10001456 3300003791 Bacteria 17252
9 Ga0055530_10006216 3300003791 Bacteria 5395
10 Ga0065165_1000210 3300005262 Bacteria 101721
11 Ga0065165_1000724 3300005262 Bacteria 46099
12 Ga0065165_1001315 3300005262 Bacteria 27750
13 Ga0070670_100000062 3300005331 Bacteria 112560
14 Ga0070689_100019970 3300005340 Bacteria 4964
15 Ga0070668_100000121 3300005347 Bacteria 48221
16 Ga0070668_100004770 3300005347 Bacteria 10057
17 Ga0070668_100009276 3300005347 Bacteria 7296
18 Ga0070668_100011002 3300005347 Bacteria 6735
19 Ga0070668_100041379 3300005347 Bacteria 3530
20 Ga0070671_100002522 3300005355 Bacteria 14189
21 Ga0070673_100025858 3300005364 Bacteria 4328
22 Ga0070659_100001044 3300005366 Bacteria 20232
23 Ga0070667_100000178 3300005367 Bacteria 77450
24 Ga0070681_10034147 3300005458 Bacteria 5108
25 Ga0070679_100025635 3300005530 Bacteria 5787
26 Ga0070684_100037210 3300005535 Bacteria 4172
27 Ga0068853_100048185 3300005539 Bacteria 3659
28 Ga0070693_100000331 3300005547 Bacteria 21627
29 Ga0070665_100000121 3300005548 Bacteria 147683
30 Ga0070665_100002101 3300005548 Bacteria 22316
31 Ga0070665_100008666 3300005548 Bacteria 10293
32 Ga0068857_100016841 3300005577 Bacteria 6403
33 Ga0068854_100025968 3300005578 Bacteria 4021
34 Ga0068852_100002032 3300005616 Bacteria 13789
35 Ga0068859_100000401 3300005617 Bacteria 43052
36 Ga0068859_100005774 3300005617 Bacteria 12576
37 Ga0068859_100058345 3300005617 Bacteria 3888
38 Ga0068864_100000126 3300005618 Bacteria 74385
39 Ga0068864_100043898 3300005618 Bacteria 3829
40 Ga0068870_10009744 3300005840 Bacteria 4381
41 Ga0068863_100000247 3300005841 Bacteria 57319
42 Ga0068863_100000367 3300005841 Bacteria 45948
43 Ga0068863_100006018 3300005841 Bacteria 11897
44 Ga0068858_100000219 3300005842 Bacteria 61717
45 Ga0068858_100001527 3300005842 Bacteria 23772
46 Ga0068858_100003396 3300005842 Bacteria 15835
47 Ga0068858_100012987 3300005842 Bacteria 7852
48 Ga0068860_100000055 3300005843 Bacteria 203538
49 Ga0068860_100000616 3300005843 Bacteria 42070
50 Ga0068860_100001852 3300005843 Bacteria 22494
51 Ga0068862_100000527 3300005844 Bacteria 40316
52 Ga0068862_100011978 3300005844 Bacteria 7164
53 Ga0081455_10002778 3300005937 Bacteria 20623
54 Ga0081455_10006075 3300005937 Bacteria 13071
55 Ga0075368_10003914 3300006042 Bacteria 5011
56 Ga0075364_10007408 3300006051 Bacteria 6513
57 Ga0075367_10002004 3300006178 Bacteria 9076
58 Ga0075369_10011652 3300006186 Bacteria 3462
59 Ga0075366_10001466 3300006195 Bacteria 11762
60 Ga0075366_10020513 3300006195 Bacteria 3835
61 Ga0097621_100001896 3300006237 Bacteria 14279
62 Ga0097621_100020798 3300006237 Bacteria 5063
63 Ga0068871_100037352 3300006358 Bacteria 3873
64 Ga0075428_100023822 3300006844 Bacteria 6774
65 Ga0075433_10055756 3300006852 Bacteria 3450
66 Ga0068865_100005007 3300006881 Bacteria 8013
67 Ga0097620_100000401 3300006931 Bacteria 43052
68 Ga0097620_100005774 3300006931 Bacteria 12576
69 Ga0097620_100058343 3300006931 Bacteria 3888
70 Ga0105240_10000094 3300009093 Bacteria 181637
71 Ga0105240_10000798 3300009093 Bacteria 57073
72 Ga0105240_10001341 3300009093 Bacteria 42205
73 Ga0105240_10006742 3300009093 Bacteria 16815
74 Ga0105240_10032763 3300009093 Bacteria 6723
75 Ga0105240_10072554 3300009093 Bacteria 4254
76 Ga0105240_10109625 3300009093 Bacteria 3343
77 Ga0111539_10007900 3300009094 Bacteria 13576
78 Ga0105245_10063088 3300009098 Bacteria 3345
79 Ga0105242_10003536 3300009176 Bacteria 12147
80 Ga0105242_10012689 3300009176 Bacteria 6490
81 Ga0105248_10001413 3300009177 Bacteria 26833
82 Ga0105248_10011173 3300009177 Bacteria 9903
83 Ga0105248_10028939 3300009177 Bacteria 6177
84 Ga0105248_10046631 3300009177 Bacteria 4858
85 Ga0105248_10083087 3300009177 Bacteria 3603
86 Ga0105237_10030902 3300009545 Bacteria 5434
87 Ga0105249_10004879 3300009553 Bacteria 11576
88 Ga0105239_10046370 3300010375 Bacteria 4763
89 Ga0157373_10001230 3300013100 Bacteria 19573
90 Ga0157373_10001673 3300013100 Bacteria 16931
91 Ga0157370_10044772 3300013104 Bacteria 4250
92 Ga0157369_10001148 3300013105 Bacteria 33050
93 Ga0157378_10028377 3300013297 Bacteria 4937
94 Ga0163162_10039342 3300013306 Bacteria 4725
95 Ga0157372_10005894 3300013307 Bacteria 13042
96 Ga0157375_10030385 3300013308 Bacteria 5093
97 Ga0157380_10016703 3300014326 Bacteria 5420
98 Ga0157377_10006634 3300014745 Bacteria 5530
99 Ga0157379_10000531 3300014968 Bacteria 30814
100 Ga0157379_10004107 3300014968 Bacteria 12421
101 Ga0183365_10001 3300015684 Bacteria 2090444
102 Ga0213876_10012102 3300021384 Bacteria 4596
103 Ga0209026_1001009 3300025250 Bacteria 13901
104 Ga0209565_1000469 3300025263 Bacteria 30315
105 Ga0209673_1002952 3300025273 Bacteria 10658
106 Ga0209676_1000691 3300025292 Bacteria 47509
107 Ga0209676_1000733 3300025292 Bacteria 44859
108 Ga0209676_1001269 3300025292 Bacteria 26245
109 Ga0209758_1001228 3300025297 Bacteria 32082
110 Ga0209758_1005465 3300025297 Bacteria 9765
111 Ga0209050_1000101 3300025298 Bacteria 230076
112 Ga0209050_1000879 3300025298 Bacteria 40293
113 Ga0209050_1001896 3300025298 Bacteria 20030
114 Ga0209050_1006498 3300025298 Bacteria 6896
115 Ga0209050_1008279 3300025298 Bacteria 5601
116 Ga0209256_1004766 3300025299 Bacteria 8273
117 Ga0209256_1010155 3300025299 Bacteria 3990
118 Ga0209257_1000187 3300025304 Bacteria 154077
119 Ga0209257_1001165 3300025304 Bacteria 33428
120 Ga0209257_1007918 3300025304 Bacteria 6240
121 Ga0207707_10021659 3300025912 Bacteria 5617
122 Ga0207695_10000419 3300025913 Bacteria 94504
123 Ga0207695_10001328 3300025913 Bacteria 41985
124 Ga0207695_10001861 3300025913 Bacteria 33054
125 Ga0207695_10002756 3300025913 Bacteria 25626
126 Ga0207695_10026338 3300025913 Bacteria 6491
127 Ga0207652_10009959 3300025921 Bacteria 7653
128 Ga0207652_10037269 3300025921 Bacteria 4115
129 Ga0207694_10006047 3300025924 Bacteria 9261
130 Ga0207694_10020218 3300025924 Bacteria 5035
131 Ga0207650_10000084 3300025925 Bacteria 125773
132 Ga0207659_10016100 3300025926 Bacteria 4861
133 Ga0207644_10001368 3300025931 Bacteria 15696
134 Ga0207690_10001186 3300025932 Bacteria 16502
135 Ga0207686_10011173 3300025934 Bacteria 4909
136 Ga0207686_10024618 3300025934 Bacteria 3490
137 Ga0207704_10002589 3300025938 Bacteria 8161
138 Ga0207691_10001638 3300025940 Bacteria 22242
139 Ga0207711_10000482 3300025941 Bacteria 41192
140 Ga0207711_10022605 3300025941 Bacteria 5261
141 Ga0207661_10031567 3300025944 Bacteria 4094
142 Ga0207667_10026889 3300025949 Bacteria 6277
143 Ga0207651_10001555 3300025960 Bacteria 10492
144 Ga0207712_10002607 3300025961 Bacteria 11567
145 Ga0207668_10000032 3300025972 Bacteria 122020
146 Ga0207668_10000036 3300025972 Bacteria 117190
147 Ga0207668_10005284 3300025972 Bacteria 7598
148 Ga0207658_10002743 3300025986 Bacteria 12715
149 Ga0207703_10003870 3300026035 Bacteria 12445
150 Ga0207639_10050988 3300026041 Bacteria 3145
151 Ga0207639_10064199 3300026041 Bacteria 2846
152 Ga0207702_10034703 3300026078 Bacteria 4219
153 Ga0207641_10000070 3300026088 Bacteria 152598
154 Ga0207641_10000913 3300026088 Bacteria 30529
155 Ga0207641_10002297 3300026088 Bacteria 17780
156 Ga0207648_10017197 3300026089 Bacteria 6589
157 Ga0207676_10000102 3300026095 Bacteria 77065
158 Ga0207676_10001282 3300026095 Bacteria 18690
159 Ga0207674_10047749 3300026116 Bacteria 4387
160 Ga0207674_10076822 3300026116 Bacteria 3347
161 Ga0207675_100046125 3300026118 Bacteria 4070
162 Ga0207683_10055432 3300026121 Bacteria 3476
163 Ga0207698_10033373 3300026142 Bacteria 3740
164 Ga0268266_10000106 3300028379 Bacteria 175109
165 Ga0268266_10001096 3300028379 Bacteria 33990
166 Ga0268266_10003600 3300028379 Bacteria 15326
167 Ga0268265_10000841 3300028380 Bacteria 28852
168 Ga0268265_10003719 3300028380 Bacteria 10850
169 Ga0268264_10000112 3300028381 Bacteria 203742
170 Ga0268264_10000284 3300028381 Bacteria 85451
171 Ga0268264_10006523 3300028381 Bacteria 9828
172 Ga0265323_10000379 3300028653 Bacteria 25733
173 Ga0265336_10000081 3300028666 Bacteria 76621
174 Ga0307517_10009198 3300028786 Bacteria 14052
175 Ga0307517_10040314 3300028786 Bacteria 5089
176 Ga0307515_10094815 3300028794 Bacteria 3681
177 Ga0265338_10002366 3300028800 Bacteria 28452
178 Ga0265338_10005678 3300028800 Bacteria 16152
179 Ga0265338_10065298 3300028800 Bacteria 3158
180 Ga0265324_10000018 3300029957 Bacteria 184238
181 Ga0265324_10002334 3300029957 Bacteria 9819
182 Ga0265324_10002649 3300029957 Bacteria 8961
183 Ga0265330_10001562 3300031235 Bacteria 13149
184 Ga0265332_10001679 3300031238 Bacteria 12088
185 Ga0265325_10000035 3300031241 Bacteria 99051
186 Ga0265331_10001280 3300031250 Bacteria 18739
187 Ga0265327_10000308 3300031251 Bacteria 94808
188 Ga0265327_10000568 3300031251 Bacteria 62780
189 Ga0265327_10003056 3300031251 Bacteria 16539
190 Ga0265316_10000445 3300031344 Bacteria 47073
191 Ga0265316_10002843 3300031344 Bacteria 17711
192 Ga0307513_10000162 3300031456 Bacteria 96000
193 Ga0307513_10002892 3300031456 Bacteria 23491
194 Ga0307513_10004143 3300031456 Bacteria 19418
195 Ga0316575_10000250 3300031665 Bacteria 14639
196 Ga0265314_10002534 3300031711 Bacteria 18583
197 Ga0265314_10003064 3300031711 Bacteria 16478
198 Ga0265314_10025167 3300031711 Bacteria 4497
199 Ga0307516_10000154 3300031730 Bacteria 85753
200 Ga0307410_10018806 3300031852 Bacteria 4185
201 Ga0307406_10001031 3300031901 Bacteria 15518
202 Ga0307416_100037859 3300032002 Bacteria 3716
203 Ga0373927_0000368 3300035695 Bacteria 34930
204 Ga0316582_0027490 3300036647 Bacteria 3437
205 Ga0373925_0000507 3300037068 Bacteria 39351
206 Ga0395899_0000105 3300037312 Bacteria 146163
207 Ga0395899_0000187 3300037312 Bacteria 90916
208 Ga0395900_0000009 3300037418 Bacteria 476249
209 Ga0395900_0094379 3300037418 Bacteria 3073
210 Ga0395898_0003798 3300037466 Bacteria 16721
211 Ga0395905_0000346 3300037471 Bacteria 65961
212 Ga0395905_0054060 3300037471 Bacteria 3758
213 Ga0395901_0000412 3300038443 Bacteria 50385
214 Ga0395901_0034276 3300038443 Bacteria 5243
215 Ga0395901_0079922 3300038443 Bacteria 3414
216 Ga0400489_85047 3300039093 Bacteria 3132
217 Ga0436365_0698839 3300039437 Bacteria 6165
218 Ga0451577_0000002 3300042876 Bacteria 1731375
219 Ga0451577_0002690 3300042876 Bacteria 20723
220 Ga0451577_0005847 3300042876 Bacteria 12448
221 Ga0451577_0010064 3300042876 Bacteria 9060
222 Ga0451577_0018097 3300042876 Bacteria 6495
223 Ga0451577_0023685 3300042876 Bacteria 5596
224 Ga0451577_0042053 3300042876 Bacteria 4099
225 Ga0466969_0000373 3300044656 Bacteria 24574
226 Ga0453683_0000013 3300044673 Bacteria 371932
227 Ga0453683_0000092 3300044673 Bacteria 136648
228 Ga0453683_0003424 3300044673 Bacteria 11699
229 Ga0453683_0009671 3300044673 Bacteria 6429
230 Ga0453683_0013550 3300044673 Bacteria 5317
231 Ga0466961_0024050 3300044693 Bacteria 3919
232 Ga0453684_0000002 3300044712 Bacteria 1731375
233 Ga0453684_0000040 3300044712 Bacteria 690210
234 Ga0453684_0000337 3300044712 Bacteria 195296
235 Ga0453684_0002642 3300044712 Bacteria 42802
236 Ga0453684_0005873 3300044712 Bacteria 23848
237 Ga0453684_0005918 3300044712 Bacteria 23717
238 Ga0453684_0008808 3300044712 Bacteria 17900
239 Ga0453684_0019356 3300044712 Bacteria 10368
240 Ga0453684_0036450 3300044712 Bacteria 6778
241 Ga0453684_0109596 3300044712 Bacteria 3358
242 Ga0466971_0013266 3300044719 Bacteria 3616
243 Ga0466970_0019066 3300044765 Bacteria 3555
244 Ga0466959_0000565 3300045049 Bacteria 21544
245 Ga0466959_0015919 3300045049 Bacteria 5487
246 Ga0451576_0000006 3300045051 Bacteria 949698
247 Ga0451576_0000037 3300045051 Bacteria 372173
248 Ga0451576_0000320 3300045051 Bacteria 116612
249 Ga0451576_0000369 3300045051 Bacteria 107433
250 Ga0451576_0001334 3300045051 Bacteria 42651
251 Ga0451576_0001458 3300045051 Bacteria 40210
252 Ga0451576_0013797 3300045051 Bacteria 9026
253 Ga0451576_0014471 3300045051 Bacteria 8778
254 Ga0451576_0015332 3300045051 Bacteria 8493
255 Ga0451576_0021770 3300045051 Bacteria 6959
256 Ga0466958_0000741 3300045836 Bacteria 14286
257 Ga0495627_001069 3300046453 Bacteria 18121
258 Ga0495590_0007265 3300046457 Bacteria 4282
259 Ga0495638_0000003 3300046460 Bacteria 888792
260 Ga0495638_0000845 3300046460 Bacteria 32033
261 Ga0495638_0002399 3300046460 Bacteria 15336
262 Ga0495638_0004548 3300046460 Bacteria 10507
263 Ga0495650_0000030 3300046471 Bacteria 436318
264 Ga0495583_0000002 3300046506 Bacteria 782521
265 Ga0495606_0003344 3300046507 Bacteria 17106
266 Ga0495610_0000091 3300046512 Bacteria 105916
267 Ga0495610_0003154 3300046512 Bacteria 13078
268 Ga0495620_0010452 3300046515 Bacteria 4898
269 Ga0495643_0033877 3300046522 Bacteria 2821
270 Ga0495648_0000154 3300046524 Bacteria 81679
271 Ga0495654_0000048 3300046530 Bacteria 147348
272 Ga0495645_0033527 3300046543 Bacteria 3746
273 Ga0495622_0002808 3300046557 Bacteria 8307
274 Ga0495667_0006819 3300046559 Bacteria 7753
275 Ga0495668_0000703 3300046616 Bacteria 40297
276 Ga0495625_0015798 3300046660 Bacteria 5960
277 Ga0495669_0000196 3300046684 Bacteria 37390
278 Ga0495669_0000440 3300046684 Bacteria 19763
279 Ga0495613_0003198 3300046689 Bacteria 12258
280 Ga0495672_0001353 3300047320 Bacteria 24293
281 Ga0495673_0001111 3300047469 Bacteria 23151
282 Ga0495673_0003446 3300047469 Bacteria 10417
283 Ga0495686_0004001 3300047472 Bacteria 12338
284 Ga0495686_0025241 3300047472 Bacteria 3898
285 Ga0496102_0016015 3300048905 Bacteria 6545
286 Ga0496102_0043949 3300048905 Bacteria 4052
287 Ga0496107_0000188 3300048910 Bacteria 32167
288 Ga0496112_0015861 3300048915 Bacteria 7041
289 Ga0496115_0003649 3300048918 Bacteria 11079
290 Ga0496118_0005250 3300048921 Bacteria 14796
291 Ga0496121_0000855 3300048924 Bacteria 55079
292 Ga0496121_0015713 3300048924 Bacteria 7891
293 Ga0496125_0009799 3300048928 Bacteria 9763
294 Ga0495678_001825 3300049459 Bacteria 15648
295 Ga0501034_0090447 3300049571 Bacteria 3058
296 Ga0501047_0005187 3300049581 Bacteria 12228
297 Ga0501264_000081 3300049761 Bacteria 13699
298 Ga0501035_0017630 3300049822 Bacteria 6587
299 Ga0501044_0001454 3300049823 Bacteria 27833
300 Ga0501044_0006211 3300049823 Bacteria 13205
301 nmdc:mga00v17_1486_c1 3300050491 Bacteria 12252
302 nmdc:mga0k408_10850_c1 3300050493 Bacteria 4940
303 nmdc:mga0k408_3882_c1 3300050493 Bacteria 7923
304 Ga0500635_0000102 3300053080 Bacteria 51023
305 Ga0500635_0000646 3300053080 Bacteria 8946
306 Ga0500578_0001504 3300053086 Bacteria 23136
307 Ga0500643_000298 3300053087 Bacteria 41754
308 Ga0500643_002179 3300053087 Bacteria 10365
309 Ga0500643_014347 3300053087 Bacteria 2758
310 Ga0500644_0000340 3300053088 Bacteria 23717
311 Ga0500651_0018265 3300053093 Bacteria 4340
312 Ga0500641_0001060 3300053096 Bacteria 9810
313 Ga0500554_000546 3300053102 Bacteria 7776
314 Ga0500555_006901 3300053103 Bacteria 3228
315 Ga0500556_0001739 3300053104 Bacteria 8212
316 Ga0500562_000533 3300053108 Bacteria 9246
317 Ga0500562_002047 3300053108 Bacteria 5038
318 Ga0500562_002873 3300053108 Bacteria 4294
319 Ga0500594_0000137 3300053118 Bacteria 20341
320 Ga0500595_000910 3300053119 Bacteria 16856
321 Ga0500608_000007 3300053122 Bacteria 100296
322 Ga0500608_000256 3300053122 Bacteria 20747
323 Ga0500608_001112 3300053122 Bacteria 9584
324 Ga0500618_000064 3300053125 Bacteria 91120
325 Ga0500559_0000062 3300053136 Bacteria 87142
326 Ga0500559_0001041 3300053136 Bacteria 16972
327 Ga0500564_000923 3300053138 Bacteria 9499
328 Ga0500616_0000007 3300053153 Bacteria 836875
329 Ga0500622_0000115 3300053156 Bacteria 83078
330 Ga0500622_0001018 3300053156 Bacteria 23542
331 Ga0500636_0006357 3300053177 Bacteria 6778
332 Ga0500645_000851 3300053730 Bacteria 17875
333 Ga0500645_001973 3300053730 Bacteria 9689
334 Ga0500645_002046 3300053730 Bacteria 9391
335 Ga0500645_002091 3300053730 Bacteria 9225
336 Ga0500609_000329 3300053731 Bacteria 7026

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 iso_pu_bacteria 2643221699 2644551838 571
2 3300046543 Ga0495645_0033527 Ga0495645_0033527_20_2146 587
3 3300049581 Ga0501047_0005187 Ga0501047_0005187_5684_8293 648
4 3300046689 Ga0495613_0003198 Ga0495613_0003198_3922_6594 653
5 3300053125 Ga0500618_000064 Ga0500618_000064_19162_21855 655
6 3300053136 Ga0500559_0001041 Ga0500559_0001041_9614_12286 656
7 3300031852 Ga0307410_10018806 Ga0307410_100188062 658
8 3300053087 Ga0500643_000298 Ga0500643_000298_38872_41499 664
9 3300053096 Ga0500641_0001060 Ga0500641_0001060_6954_9581 664
10 3300053730 Ga0500645_000851 Ga0500645_000851_256_2883 664
11 3300053087 Ga0500643_014347 Ga0500643_014347_66_2678 667
12 3300053108 Ga0500562_002047 Ga0500562_002047_1980_4577 667
13 3300053730 Ga0500645_002046 Ga0500645_002046_4462_7059 667
14 3300006186 Ga0075369_10011652 Ga0075369_100116523 670
15 3300046684 Ga0495669_0000440 Ga0495669_0000440_656_3265 672
16 3300013297 Ga0157378_10028377 Ga0157378_100283773 675
17 3300046684 Ga0495669_0000196 Ga0495669_0000196_24651_27275 676
18 3300037471 Ga0395905_0054060 Ga0395905_0054060_491_3154 679
19 3300038443 Ga0395901_0034276 Ga0395901_0034276_1963_4626 679
20 3300053087 Ga0500643_002179 Ga0500643_002179_156_2807 679
21 3300025913 Ga0207695_10001328 Ga0207695_100013289 680
22 3300031251 Ga0265327_10000568 Ga0265327_1000056857 680
23 3300037471 Ga0395905_0000346 Ga0395905_0000346_47890_50505 680
24 3300025913 Ga0207695_10026338 Ga0207695_100263382 682
25 3300005347 Ga0070668_100004770 Ga0070668_1000047704 683
26 3300005843 Ga0068860_100001852 Ga0068860_1000018525 683
27 3300009093 Ga0105240_10000798 Ga0105240_1000079847 683
28 3300028381 Ga0268264_10006523 Ga0268264_100065232 683
29 3300005548 Ga0070665_100008666 Ga0070665_1000086665 684
30 3300025924 Ga0207694_10020218 Ga0207694_100202182 684
31 3300028379 Ga0268266_10001096 Ga0268266_1000109630 684
32 3300005937 Ga0081455_10002778 Ga0081455_100027786 685
33 3300009093 Ga0105240_10109625 Ga0105240_101096251 685
34 3300053103 Ga0500555_006901 Ga0500555_006901_526_3123 685
35 3300053108 Ga0500562_000533 Ga0500562_000533_4911_7550 685
36 3300005347 Ga0070668_100011002 Ga0070668_1000110023 686
37 3300005548 Ga0070665_100000121 Ga0070665_10000012163 686
38 3300005841 Ga0068863_100000367 Ga0068863_10000036711 686
39 3300005842 Ga0068858_100000219 Ga0068858_10000021938 686
40 3300025972 Ga0207668_10000032 Ga0207668_1000003256 686
41 3300026088 Ga0207641_10000070 Ga0207641_10000070137 686
42 3300026095 Ga0207676_10001282 Ga0207676_1000128215 686
43 3300028379 Ga0268266_10000106 Ga0268266_10000106101 686
44 3300053122 Ga0500608_000256 Ga0500608_000256_16248_18908 687
45 3300053080 Ga0500635_0000646 Ga0500635_0000646_364_3036 688
46 3300053108 Ga0500562_002873 Ga0500562_002873_732_3323 688
47 3300003791 Ga0055530_10001456 Ga0055530_100014562 689
48 3300025298 Ga0209050_1000101 Ga0209050_100010136 689
49 3300025304 Ga0209257_1001165 Ga0209257_10011656 689
50 3300035695 Ga0373927_0000368 Ga0373927_0000368_9106_11772 689
51 3300037068 Ga0373925_0000507 Ga0373925_0000507_13527_16193 689
52 3300049823 Ga0501044_0001454 Ga0501044_0001454_14109_16652 689
53 3300005366 Ga0070659_100001044 Ga0070659_1000010443 690
54 3300005843 Ga0068860_100000055 Ga0068860_100000055180 690
55 3300009093 Ga0105240_10006742 Ga0105240_1000674218 690
56 3300025913 Ga0207695_10002756 Ga0207695_1000275618 690
57 3300025932 Ga0207690_10001186 Ga0207690_100011863 690
58 3300025941 Ga0207711_10000482 Ga0207711_1000048229 690
59 3300028381 Ga0268264_10000112 Ga0268264_1000011217 690
60 3300048905 Ga0496102_0043949 Ga0496102_0043949_627_3239 690
61 3300048918 Ga0496115_0003649 Ga0496115_0003649_2474_5095 690
62 3300009177 Ga0105248_10001413 Ga0105248_1000141316 691
63 3300048921 Ga0496118_0005250 Ga0496118_0005250_5252_7891 691
64 3300048924 Ga0496121_0000855 Ga0496121_0000855_50227_52866 691
65 3300005458 Ga0070681_10034147 Ga0070681_100341474 692
66 3300025921 Ga0207652_10009959 Ga0207652_100099594 692
67 3300028380 Ga0268265_10003719 Ga0268265_100037193 692
68 3300005347 Ga0070668_100041379 Ga0070668_1000413792 693
69 3300037312 Ga0395899_0000187 Ga0395899_0000187_42745_45342 693
70 3300037418 Ga0395900_0000009 Ga0395900_0000009_14478_17075 693
71 3300037466 Ga0395898_0003798 Ga0395898_0003798_4859_7456 693
72 3300038443 Ga0395901_0000412 Ga0395901_0000412_43175_45772 693
73 3300015684 Ga0183365_10001 Ga0183365_100011240 694
74 3300025250 Ga0209026_1001009 Ga0209026_10010098 694
75 3300037312 Ga0395899_0000105 Ga0395899_0000105_44567_47194 694
76 3300046457 Ga0495590_0007265 Ga0495590_0007265_908_3538 695
77 3300053122 Ga0500608_001112 Ga0500608_001112_2009_4642 695
78 3300005355 Ga0070671_100002522 Ga0070671_1000025225 696
79 3300013100 Ga0157373_10001230 Ga0157373_100012309 696
80 3300025931 Ga0207644_10001368 Ga0207644_100013682 696
81 3300026035 Ga0207703_10003870 Ga0207703_1000387012 696
82 3300005617 Ga0068859_100000401 Ga0068859_10000040123 697
83 3300005841 Ga0068863_100006018 Ga0068863_10000601811 697
84 3300005842 Ga0068858_100003396 Ga0068858_1000033963 697
85 3300006931 Ga0097620_100000401 Ga0097620_10000040123 697
86 3300014968 Ga0157379_10000531 Ga0157379_1000053117 697
87 3300025941 Ga0207711_10022605 Ga0207711_100226053 697
88 3300026088 Ga0207641_10002297 Ga0207641_1000229711 697
89 3300053122 Ga0500608_000007 Ga0500608_000007_4503_7202 697
90 3300013100 Ga0157373_10001673 Ga0157373_1000167315 698
91 3300025938 Ga0207704_10002589 Ga0207704_100025895 698
92 3300046515 Ga0495620_0010452 Ga0495620_0010452_951_3584 698
93 3300046522 Ga0495643_0033877 Ga0495643_0033877_65_2698 698
94 3300046557 Ga0495622_0002808 Ga0495622_0002808_2899_5532 698
95 3300049822 Ga0501035_0017630 Ga0501035_0017630_655_3267 698
96 3300053093 Ga0500651_0018265 Ga0500651_0018265_727_3360 698
97 3300053119 Ga0500595_000910 Ga0500595_000910_2953_5586 698
98 3300042876 Ga0451577_0000002 Ga0451577_0000002_1647943_1650663 699
99 3300044656 Ga0466969_0000373 Ga0466969_0000373_1200_3845 699
100 3300044673 Ga0453683_0000013 Ga0453683_0000013_288500_291220 699
101 3300044693 Ga0466961_0024050 Ga0466961_0024050_275_2920 699
102 3300044712 Ga0453684_0000002 Ga0453684_0000002_80713_83433 699
103 3300044712 Ga0453684_0000040 Ga0453684_0000040_613074_615764 699
104 3300044719 Ga0466971_0013266 Ga0466971_0013266_819_3464 699
105 3300044765 Ga0466970_0019066 Ga0466970_0019066_18_2663 699
106 3300045049 Ga0466959_0000565 Ga0466959_0000565_4605_7250 699
107 3300045051 Ga0451576_0000037 Ga0451576_0000037_288741_291461 699
108 3300045836 Ga0466958_0000741 Ga0466958_0000741_7037_9682 699
109 3300006042 Ga0075368_10003914 Ga0075368_100039143 700
110 3300006051 Ga0075364_10007408 Ga0075364_100074082 700
111 3300006178 Ga0075367_10002004 Ga0075367_100020045 700
112 3300050491 nmdc:mga00v17_1486_c1 nmdc:mga00v17_1486_c1_2903_5518 700
113 3300005262 Ga0065165_1000210 Ga0065165_100021040 701
114 3300028800 Ga0265338_10065298 Ga0265338_100652981 701
115 3300005364 Ga0070673_100025858 Ga0070673_1000258582 703
116 3300045051 Ga0451576_0000320 Ga0451576_0000320_12133_14784 703
117 3300053730 Ga0500645_001973 Ga0500645_001973_5202_7862 703
118 3300025304 Ga0209257_1007918 Ga0209257_10079182 704
119 3300042876 Ga0451577_0002690 Ga0451577_0002690_11256_13877 704
120 3300045049 Ga0466959_0015919 Ga0466959_0015919_2692_5325 704
121 3300045051 Ga0451576_0013797 Ga0451576_0013797_698_3319 704
122 3300048928 Ga0496125_0009799 Ga0496125_0009799_4090_6750 704
123 3300003791 Ga0055530_10006216 Ga0055530_100062163 705
124 3300005618 Ga0068864_100043898 Ga0068864_1000438981 705
125 3300009177 Ga0105248_10083087 Ga0105248_100830872 705
126 3300025292 Ga0209676_1000691 Ga0209676_100069117 705
127 3300025292 Ga0209676_1001269 Ga0209676_100126917 705
128 3300025299 Ga0209256_1010155 Ga0209256_10101552 705
129 3300025960 Ga0207651_10001555 Ga0207651_100015559 705
130 3300048905 Ga0496102_0016015 Ga0496102_0016015_483_3116 705
131 3300050493 nmdc:mga0k408_10850_c1 nmdc:mga0k408_10850_c1_958_3573 705
132 3300005262 Ga0065165_1001315 Ga0065165_10013156 706
133 3300006195 Ga0075366_10020513 Ga0075366_100205133 706
134 3300028794 Ga0307515_10094815 Ga0307515_100948152 706
135 3300046616 Ga0495668_0000703 Ga0495668_0000703_29677_32394 706
136 3300053136 Ga0500559_0000062 Ga0500559_0000062_45129_47774 706
137 3300003775 Ga0055524_1003124 Ga0055524_10031245 707
138 3300005347 Ga0070668_100009276 Ga0070668_1000092762 707
139 3300025263 Ga0209565_1000469 Ga0209565_100046910 707
140 3300025273 Ga0209673_1002952 Ga0209673_10029529 707
141 3300025299 Ga0209256_1004766 Ga0209256_10047663 707
142 3300025304 Ga0209257_1000187 Ga0209257_100018745 707
143 3300025972 Ga0207668_10005284 Ga0207668_100052844 707
144 3300005844 Ga0068862_100011978 Ga0068862_1000119783 708
145 3300009093 Ga0105240_10000094 Ga0105240_1000009487 708
146 3300025297 Ga0209758_1001228 Ga0209758_100122822 708
147 3300025297 Ga0209758_1005465 Ga0209758_10054654 708
148 3300025298 Ga0209050_1001896 Ga0209050_10018968 708
149 3300025913 Ga0207695_10000419 Ga0207695_1000041947 708
150 3300026041 Ga0207639_10064199 Ga0207639_100641991 708
151 3300031251 Ga0265327_10003056 Ga0265327_1000305617 708
152 3300031456 Ga0307513_10004143 Ga0307513_100041439 708
153 3300046453 Ga0495627_001069 Ga0495627_001069_9942_12614 708
154 3300046460 Ga0495638_0000845 Ga0495638_0000845_12528_15212 708
155 3300046471 Ga0495650_0000030 Ga0495650_0000030_339143_341812 708
156 3300046507 Ga0495606_0003344 Ga0495606_0003344_12840_15527 708
157 3300046512 Ga0495610_0000091 Ga0495610_0000091_48000_50672 708
158 3300046530 Ga0495654_0000048 Ga0495654_0000048_6620_9301 708
159 3300046660 Ga0495625_0015798 Ga0495625_0015798_976_3645 708
160 3300047320 Ga0495672_0001353 Ga0495672_0001353_18579_21251 708
161 3300047469 Ga0495673_0003446 Ga0495673_0003446_3504_6191 708
162 3300048910 Ga0496107_0000188 Ga0496107_0000188_655_3342 708
163 3300048915 Ga0496112_0015861 Ga0496112_0015861_4117_6708 708
164 3300048924 Ga0496121_0015713 Ga0496121_0015713_3359_6046 708
165 3300049571 Ga0501034_0090447 Ga0501034_0090447_241_2850 708
166 3300049823 Ga0501044_0006211 Ga0501044_0006211_6017_8617 708
167 3300053102 Ga0500554_000546 Ga0500554_000546_4847_7525 708
168 3300025292 Ga0209676_1000733 Ga0209676_100073312 709
169 3300025298 Ga0209050_1006498 Ga0209050_10064982 709
170 3300025298 Ga0209050_1008279 Ga0209050_10082793 709
171 3300028786 Ga0307517_10040314 Ga0307517_100403143 709
172 3300031901 Ga0307406_10001031 Ga0307406_100010319 709
173 3300046460 Ga0495638_0004548 Ga0495638_0004548_7483_10155 709
174 3300046506 Ga0495583_0000002 Ga0495583_0000002_32000_34702 709
175 3300046512 Ga0495610_0003154 Ga0495610_0003154_1504_4176 709
176 3300047472 Ga0495686_0004001 Ga0495686_0004001_9614_12286 709
177 3300049459 Ga0495678_001825 Ga0495678_001825_4659_7331 709
178 3300053104 Ga0500556_0001739 Ga0500556_0001739_2254_4923 709
179 3300053730 Ga0500645_002091 Ga0500645_002091_2205_4877 709
180 3300053731 Ga0500609_000329 Ga0500609_000329_624_3296 709
181 3300021384 Ga0213876_10012102 Ga0213876_100121022 710
182 3300039437 Ga0436365_0698839 Ga0436365_0698839_1734_4343 710
183 3300046460 Ga0495638_0002399 Ga0495638_0002399_4086_6758 710
184 3300046524 Ga0495648_0000154 Ga0495648_0000154_72214_74892 710
185 3300047469 Ga0495673_0001111 Ga0495673_0001111_13209_15887 710
186 3300053086 Ga0500578_0001504 Ga0500578_0001504_10092_12764 710
187 3300053088 Ga0500644_0000340 Ga0500644_0000340_7607_10285 710
188 3300053118 Ga0500594_0000137 Ga0500594_0000137_7361_10033 710
189 3300053138 Ga0500564_000923 Ga0500564_000923_1540_4218 710
190 3300009093 Ga0105240_10001341 Ga0105240_1000134112 711
191 3300025913 Ga0207695_10001861 Ga0207695_1000186112 711
192 3300031730 Ga0307516_10000154 Ga0307516_1000015430 711
193 3300005331 Ga0070670_100000062 Ga0070670_10000006262 712
194 3300005347 Ga0070668_100000121 Ga0070668_10000012136 712
195 3300005367 Ga0070667_100000178 Ga0070667_10000017811 712
196 3300005548 Ga0070665_100002101 Ga0070665_1000021014 712
197 3300005618 Ga0068864_100000126 Ga0068864_10000012634 712
198 3300005841 Ga0068863_100000247 Ga0068863_10000024727 712
199 3300005842 Ga0068858_100012987 Ga0068858_1000129875 712
200 3300005843 Ga0068860_100000616 Ga0068860_10000061620 712
201 3300005844 Ga0068862_100000527 Ga0068862_10000052711 712
202 3300009177 Ga0105248_10046631 Ga0105248_100466313 712
203 3300009553 Ga0105249_10004879 Ga0105249_100048799 712
204 3300014968 Ga0157379_10004107 Ga0157379_100041073 712
205 3300025925 Ga0207650_10000084 Ga0207650_1000008462 712
206 3300025961 Ga0207712_10002607 Ga0207712_100026079 712
207 3300025972 Ga0207668_10000036 Ga0207668_1000003629 712
208 3300025986 Ga0207658_10002743 Ga0207658_100027433 712
209 3300026088 Ga0207641_10000913 Ga0207641_1000091314 712
210 3300026095 Ga0207676_10000102 Ga0207676_1000010215 712
211 3300028379 Ga0268266_10003600 Ga0268266_100036009 712
212 3300028380 Ga0268265_10000841 Ga0268265_1000084124 712
213 3300028381 Ga0268264_10000284 Ga0268264_1000028419 712
214 iso_pu_bacteria 2582581280 2585151425 712
215 iso_pu_bacteria 2582581293 2585196138 712
216 iso_pu_bacteria 2818991435 2819536987 712
217 iso_pu_bacteria 2818991454 2819645399 712
218 3300006844 Ga0075428_100023822 Ga0075428_1000238222 713
219 3300009094 Ga0111539_10007900 Ga0111539_100079009 713
220 3300031456 Ga0307513_10000162 Ga0307513_1000016279 713
221 3300045051 Ga0451576_0000006 Ga0451576_0000006_581168_583783 713
222 3300006195 Ga0075366_10001466 Ga0075366_100014662 714
223 3300028666 Ga0265336_10000081 Ga0265336_1000008136 714
224 3300029957 Ga0265324_10000018 Ga0265324_10000018135 714
225 3300031241 Ga0265325_10000035 Ga0265325_1000003524 714
226 3300031250 Ga0265331_10001280 Ga0265331_100012809 714
227 3300031251 Ga0265327_10000308 Ga0265327_1000030880 714
228 3300031711 Ga0265314_10003064 Ga0265314_100030643 714
229 3300031711 Ga0265314_10025167 Ga0265314_100251674 714
230 3300050493 nmdc:mga0k408_3882_c1 nmdc:mga0k408_3882_c1_596_3136 714
231 3300005340 Ga0070689_100019970 Ga0070689_1000199704 715
232 3300005547 Ga0070693_100000331 Ga0070693_1000003313 715
233 3300005577 Ga0068857_100016841 Ga0068857_1000168412 715
234 3300005617 Ga0068859_100058345 Ga0068859_1000583452 715
235 3300005840 Ga0068870_10009744 Ga0068870_100097443 715
236 3300006237 Ga0097621_100020798 Ga0097621_1000207982 715
237 3300006358 Ga0068871_100037352 Ga0068871_1000373522 715
238 3300006931 Ga0097620_100058343 Ga0097620_1000583432 715
239 3300009098 Ga0105245_10063088 Ga0105245_100630882 715
240 3300009177 Ga0105248_10028939 Ga0105248_100289394 715
241 3300014745 Ga0157377_10006634 Ga0157377_100066343 715
242 3300026116 Ga0207674_10047749 Ga0207674_100477492 715
243 3300031235 Ga0265330_10001562 Ga0265330_100015625 715
244 3300031665 Ga0316575_10000250 Ga0316575_1000025011 715
245 3300053080 Ga0500635_0000102 Ga0500635_0000102_10510_13146 715
246 3300053177 Ga0500636_0006357 Ga0500636_0006357_3871_6507 715
247 iso_pu_bacteria 2851153111 2851157599 715
248 3300006237 Ga0097621_100001896 Ga0097621_10000189611 716
249 3300006852 Ga0075433_10055756 Ga0075433_100557562 716
250 3300006881 Ga0068865_100005007 Ga0068865_1000050072 716
251 3300009093 Ga0105240_10032763 Ga0105240_100327632 716
252 3300009176 Ga0105242_10012689 Ga0105242_100126895 716
253 3300013308 Ga0157375_10030385 Ga0157375_100303852 716
254 3300025926 Ga0207659_10016100 Ga0207659_100161003 716
255 3300025934 Ga0207686_10011173 Ga0207686_100111733 716
256 3300025940 Ga0207691_10001638 Ga0207691_100016384 716
257 3300042876 Ga0451577_0042053 Ga0451577_0042053_645_3281 716
258 3300044712 Ga0453684_0019356 Ga0453684_0019356_4869_7505 716
259 3300045051 Ga0451576_0001458 Ga0451576_0001458_18351_20987 716
260 3300045051 Ga0451576_0021770 Ga0451576_0021770_4079_6715 716
261 3300046559 Ga0495667_0006819 Ga0495667_0006819_4040_6565 716
262 iso_pu_bacteria 2791355048 2792463468 716
263 iso_pu_bacteria 2843744320 2843748933 716
264 iso_pu_bacteria 2849560528 2849563020 716
265 iso_pu_bacteria 2849573788 2849575216 716
266 iso_pu_bacteria 2884960567 2884960694 716
267 iso_pu_bacteria 2898329390 2898333512 716
268 iso_pu_bacteria 2928531327 2928534409 716
269 iso_pu_bacteria 2510917020 2511124835 717
270 iso_pu_bacteria 2582581279 2585146880 717
271 iso_pu_bacteria 2585428106 2587919450 717
272 iso_pu_bacteria 2643221545 2643749504 717
273 iso_pu_bacteria 2643221552 2643782709 717
274 iso_pu_bacteria 2643221583 2643926481 717
275 iso_pu_bacteria 2643221584 2643928921 717
276 iso_pu_bacteria 2643221640 2644225281 717
277 iso_pu_bacteria 2643221642 2644232589 717
278 iso_pu_bacteria 2643221691 2644508460 717
279 iso_pu_bacteria 2857504554 2857504589 717
280 iso_pu_bacteria 2643221663 2644354353 718
281 iso_pu_bacteria 2941485952 2941488618 718
282 3300037418 Ga0395900_0094379 Ga0395900_0094379_440_3034 719
283 3300005616 Ga0068852_100002032 Ga0068852_1000020328 720
284 3300013105 Ga0157369_10001148 Ga0157369_1000114819 720
285 3300013307 Ga0157372_10005894 Ga0157372_100058945 720
286 3300038443 Ga0395901_0079922 Ga0395901_0079922_98_2689 720
287 iso_pu_bacteria 2643221614 2644084778 720
288 iso_pu_bacteria 2643221661 2644342330 720
289 iso_pu_bacteria 2643221666 2644365630 720
290 3300005617 Ga0068859_100005774 Ga0068859_1000057744 721
291 3300005937 Ga0081455_10006075 Ga0081455_100060757 721
292 3300006931 Ga0097620_100005774 Ga0097620_1000057744 721
293 3300009177 Ga0105248_10011173 Ga0105248_100111732 721
294 3300014326 Ga0157380_10016703 Ga0157380_100167034 721
295 3300025924 Ga0207694_10006047 Ga0207694_100060472 721
296 3300025944 Ga0207661_10031567 Ga0207661_100315672 721
297 3300025949 Ga0207667_10026889 Ga0207667_100268894 721
298 3300026041 Ga0207639_10050988 Ga0207639_100509881 721
299 3300026089 Ga0207648_10017197 Ga0207648_100171972 721
300 3300026118 Ga0207675_100046125 Ga0207675_1000461251 721
301 3300026121 Ga0207683_10055432 Ga0207683_100554322 721
302 3300026142 Ga0207698_10033373 Ga0207698_100333731 721
303 3300028786 Ga0307517_10009198 Ga0307517_100091982 721
304 3300031456 Ga0307513_10002892 Ga0307513_1000289216 721
305 iso_pu_bacteria 2643221598 2644000444 721
306 iso_pu_bacteria 2739367756 2739793435 725
307 3300005842 Ga0068858_100001527 Ga0068858_10000152722 726
308 3300009176 Ga0105242_10003536 Ga0105242_1000353614 726
309 3300025934 Ga0207686_10024618 Ga0207686_100246182 726
310 3300029957 Ga0265324_10002334 Ga0265324_100023342 728
311 3300031711 Ga0265314_10002534 Ga0265314_1000253410 728
312 3300042876 Ga0451577_0005847 Ga0451577_0005847_6419_8746 734
313 3300044712 Ga0453684_0002642 Ga0453684_0002642_31689_34016 734
314 3300053156 Ga0500622_0000115 Ga0500622_0000115_78816_81149 737
315 3300025298 Ga0209050_1000879 Ga0209050_10008797 740
316 3300047472 Ga0495686_0025241 Ga0495686_0025241_1229_3790 740
317 3300031344 Ga0265316_10002843 Ga0265316_100028434 745
318 3300042876 Ga0451577_0010064 Ga0451577_0010064_6040_8343 745
319 3300044673 Ga0453683_0000092 Ga0453683_0000092_26205_28511 745
320 3300044673 Ga0453683_0003424 Ga0453683_0003424_2339_4645 745
321 3300044712 Ga0453684_0000337 Ga0453684_0000337_67964_70267 745
322 3300044712 Ga0453684_0036450 Ga0453684_0036450_3260_5563 745
323 3300045051 Ga0451576_0000369 Ga0451576_0000369_102654_104960 745
324 3300045051 Ga0451576_0001334 Ga0451576_0001334_37870_40176 745
325 3300044712 Ga0453684_0005918 Ga0453684_0005918_2625_4943 747
326 3300013306 Ga0163162_10039342 Ga0163162_100393424 748
327 3300042876 Ga0451577_0018097 Ga0451577_0018097_1001_3304 748
328 3300032002 Ga0307416_100037859 Ga0307416_1000378591 749
329 3300036647 Ga0316582_0027490 Ga0316582_0027490_786_3089 749
330 3300039093 Ga0400489_85047 Ga0400489_85047_515_2827 749
331 3300044712 Ga0453684_0008808 Ga0453684_0008808_4839_7145 749
332 3300028653 Ga0265323_10000379 Ga0265323_1000037914 752
333 3300031344 Ga0265316_10000445 Ga0265316_1000044521 752
334 3300028800 Ga0265338_10002366 Ga0265338_100023668 753
335 3300044673 Ga0453683_0013550 Ga0453683_0013550_2980_5307 753
336 3300005530 Ga0070679_100025635 Ga0070679_1000256352 755
337 3300005535 Ga0070684_100037210 Ga0070684_1000372102 755
338 3300005539 Ga0068853_100048185 Ga0068853_1000481852 755
339 3300005578 Ga0068854_100025968 Ga0068854_1000259682 755
340 3300009093 Ga0105240_10072554 Ga0105240_100725543 755
341 3300009545 Ga0105237_10030902 Ga0105237_100309023 755
342 3300010375 Ga0105239_10046370 Ga0105239_100463702 755
343 3300013104 Ga0157370_10044772 Ga0157370_100447722 755
344 3300025912 Ga0207707_10021659 Ga0207707_100216593 755
345 3300025921 Ga0207652_10037269 Ga0207652_100372693 755
346 3300026116 Ga0207674_10076822 Ga0207674_100768222 755
347 iso_pu_bacteria 2884634485 2884636383 755
348 3300045051 Ga0451576_0014471 Ga0451576_0014471_3920_6349 758
349 3300044712 Ga0453684_0005873 Ga0453684_0005873_20074_22407 759
350 3300028800 Ga0265338_10005678 Ga0265338_100056787 760
351 3300029957 Ga0265324_10002649 Ga0265324_100026491 760
352 3300031238 Ga0265332_10001679 Ga0265332_100016794 760
353 3300044673 Ga0453683_0009671 Ga0453683_0009671_3380_5845 761
354 3300003322 rootL2_10002427 rootL2_1000242713 765
355 3300003323 rootH1_10010281 rootH1_1001028112 765
356 3300005262 Ga0065165_1000724 Ga0065165_10007246 765
357 3300003323 rootH1_10001325 rootH1_1000132527 766
358 3300053153 Ga0500616_0000007 Ga0500616_0000007_183941_186457 768
359 3300053156 Ga0500622_0001018 Ga0500622_0001018_19265_21703 768
360 3300044712 Ga0453684_0109596 Ga0453684_0109596_732_3257 769
361 3300045051 Ga0451576_0015332 Ga0451576_0015332_509_3034 769
362 3300003320 rootH2_10029927 rootH2_1002992716 770
363 3300046460 Ga0495638_0000003 Ga0495638_0000003_610403_612913 770
364 3300049761 Ga0501264_000081 Ga0501264_000081_1349_3781 770
365 3300003316 rootH1_10000209 rootH1_100002097 771
366 3300003322 rootL2_10021873 rootL2_1002187311 771
367 3300026078 Ga0207702_10034703 Ga0207702_100347032 771
368 3300042876 Ga0451577_0023685 Ga0451577_0023685_2866_5382 771

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13368

Toprim_C_rpt

Topoisomerase C-terminal repeat

790

846

0.97

PF13368

Toprim_C_rpt

Topoisomerase C-terminal repeat

721

777

0.96

PF01396

zf-C4_Topoisom

Topoisomerase DNA binding C4 zinc finger

604

642

0.95

PF01131

Topoisom_bac

DNA topoisomerase

125

561

0.92

PF01751

Toprim

Toprim domain

1

111

0.9

PF13368

Toprim_C_rpt

Topoisomerase C-terminal repeat

659

720

0.86

Structural Annotation

Top 5 Hits

ID Description Score Start End
1cy1-assembly1.cif.gz_A complex of e.coli dna topoisomerase i with 5'ptptpt 0.9232 2 567
1cy2-assembly1.cif.gz_A complex of e.coli dna topoisomerase i with tptptp3' 0.9219 2 567
1cy0-assembly1.cif.gz_A complex of e.coli dna topoisomerase i with 3'-5'-adenosine diphosphate 0.9203 2 557
1cy0-assembly1.cif.gz_A complex of e.coli dna topoisomerase i with 3'-5'-adenosine diphosphate 0.9173 2 557
1cy7-assembly1.cif.gz_A complex of e.coli dna topoisomerase i with 5'-thymidine monophosphate 0.9169 2 567
ID Description Score Start End Superfamily
1cy2A02 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; domain 2;Topoisomerase I, domain 2 0.9664 429 567 1.10.460.10
5uj1A02 Mainly Alpha;Orthogonal Bundle;Topoisomerase I; domain 2;Topoisomerase I, domain 2 0.9654 429 554 1.10.460.10
af_P9WG49_18_162_3.40.50.140 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9621 4 133 3.40.50.140
af_P06612_1_163_3.40.50.140 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9598 1 134 3.40.50.140
af_A0A1D6LWZ0_306_445_3.40.50.140 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold; 0.9546 2 134 3.40.50.140
ID Description Score Start End GO Terms
AF-A0A6N4E9E7-F1-model_v4 deleted 0.9922 1 140
AF-A0A6N4E9E7-F1-model_v4 deleted 0.9852 1 140
AF-A0A3A9FFR9-F1-model_v4 Type I DNA topoisomerase 0.9829 1 124 GO:0003677
GO:0003917
GO:0006265
AF-A0A7V7D573-F1-model_v4 Toprim domain-containing protein 0.9822 2 140 GO:0003677
GO:0003917
GO:0006265
AF-A0A2M7PL69-F1-model_v4 Omega-protein (Relaxing enzyme) (Swivelase) (Untwisting enzyme) 0.9797 4 186 GO:0003677
GO:0003917
GO:0006265

Feature Viewer

pLDDT pTM Quality
86.16 0.8 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map