F424855

General Info

Members Datasets Scaffolds Average Seq Length
368 164 736 172

Family's Representative Sequence

Representative Sequence 3300050489|nmdc:mga03683_337718_c1|nmdc:mga03683_337718_c1_71_682
Length 203
Sequence VVLVERARIDRAVPTAPSYERSNERSTDAERASRMAQQAILKTNRGDITVNLFPDHAPETVANFTGLATGTKAYDSGNGRSGPFYDGLGFHRVISGFMIQGGCPLGTGTGGPGYTFKDEPHPELVFDKPYLLAMANAGPGTNGSQFFITVGATTWLNFKHTIFGEVADQASRDVVDAIGATATGPGDRPLEPVTFSTIEIVDA

Samples

Sample ID Description Type Environment
1 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300003578 Arabidopsis root microbial communities from the University of North Carolina, USA - metaT NBMF1_36_input_d2 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Unclassified
4 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
7 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
8 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
9 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
10 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
11 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
12 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
13 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
14 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
15 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
16 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
17 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
18 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
21 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
22 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
23 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
24 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
25 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
26 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
27 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
28 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
29 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
30 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
33 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
41 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
42 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
43 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
44 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
45 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
46 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
47 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
48 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
49 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
50 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
51 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
52 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
53 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
54 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
55 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
56 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
57 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
58 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
59 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
60 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
61 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
62 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
63 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
64 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
65 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
66 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
67 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
68 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
69 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
70 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
71 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
72 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
73 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
74 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
75 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
76 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
77 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
78 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
79 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
80 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
81 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
82 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
83 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
84 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
85 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
86 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
87 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
88 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
89 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
90 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
91 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
92 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
93 3300049536 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
95 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
96 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
97 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
98 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
99 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
100 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
101 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
102 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
103 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
104 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
105 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
106 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
107 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
108 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
109 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
110 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
111 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
112 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
113 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
114 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
115 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
116 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
117 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
118 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
119 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
120 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
121 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
122 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
123 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
124 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
125 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
128 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
129 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
130 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
131 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
132 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
133 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
134 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
135 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
136 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
137 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
138 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
139 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
140 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
141 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
142 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
143 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
144 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
145 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
146 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
147 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
148 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
149 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
150 2643221576 Nocardioides sp. Root614 Isolate Unclassified
151 2643221590 Nocardioides sp. Root682 Isolate Unclassified
152 2643221604 Nocardioides sp. Root190 Isolate Unclassified
153 2643221615 Nocardioides sp. Root224 Isolate Unclassified
154 2643221617 Nocardioides sp. Root79 Isolate Unclassified
155 2643221620 Nocardioides sp. Root240 Isolate Unclassified
156 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
157 2738541305 Nocardioides sp. CF167 Isolate Unclassified
158 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
159 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
160 2811994874 Nocardioides sp. SLBN-35 Isolate Unclassified
161 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
162 2857481737 Nocardioides sp. R-74106 Isolate Unclassified
163 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
164 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 94.84
Metatranscriptomes 1.09
Isolates 4.08

Biome Distribution

Category Percentage (%)
Aerial Root 0.27
Bulb 0
Endosphere 28.26
Nodule 0
Rhizoplane 3.26
Rhizosphere 63.32
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga03683_337718_c1 3300050489 Bacteria 711
2 JGI24739J22299_10075878 3300001989 Bacteria 1038
3 Ga0006562J51391_1020109 3300003578 Bacteria 2450
4 Ga0006562J51391_1020111 3300003578 Bacteria 1670
5 Ga0070683_100154544 3300005329 Bacteria 2176
6 Ga0070689_100395015 3300005340 Bacteria 1168
7 Ga0070659_100945562 3300005366 Bacteria 755
8 Ga0070667_100021443 3300005367 Bacteria 5364
9 Ga0070667_100162848 3300005367 Bacteria 1966
10 Ga0070700_100318567 3300005441 Bacteria 1141
11 Ga0070684_100481501 3300005535 Bacteria 1149
12 Ga0070702_100623299 3300005615 Bacteria 812
13 Ga0068861_100070509 3300005719 Bacteria 2706
14 Ga0068861_101192430 3300005719 Bacteria 736
15 Ga0068860_100003903 3300005843 Bacteria 15325
16 Ga0081539_10045703 3300005985 Bacteria 2516
17 Ga0075365_10001007 3300006038 Bacteria 12061
18 Ga0075365_10015472 3300006038 Bacteria 4617
19 Ga0075365_10018003 3300006038 Bacteria 4336
20 Ga0075365_10018361 3300006038 Bacteria 4299
21 Ga0075365_10039633 3300006038 Bacteria 3068
22 Ga0075365_10088642 3300006038 Bacteria 2105
23 Ga0075365_10090733 3300006038 Bacteria 2081
24 Ga0075365_10108272 3300006038 Bacteria 1908
25 Ga0075365_10201482 3300006038 Bacteria 1394
26 Ga0075365_10309284 3300006038 Bacteria 1112
27 Ga0075365_10407569 3300006038 Bacteria 960
28 Ga0075365_10415667 3300006038 Bacteria 949
29 Ga0075365_10481944 3300006038 Bacteria 876
30 Ga0075365_10500942 3300006038 Bacteria 858
31 Ga0075368_10006249 3300006042 Bacteria 4151
32 Ga0075368_10022923 3300006042 Bacteria 2380
33 Ga0075368_10047260 3300006042 Bacteria 1704
34 Ga0075363_100014907 3300006048 Bacteria 3811
35 Ga0075363_100043379 3300006048 Bacteria 2379
36 Ga0075363_100079539 3300006048 Bacteria 1791
37 Ga0075363_100095267 3300006048 Bacteria 1642
38 Ga0075363_100110057 3300006048 Bacteria 1531
39 Ga0075363_100130811 3300006048 Bacteria 1407
40 Ga0075364_10008017 3300006051 Bacteria 6297
41 Ga0075364_10021174 3300006051 Bacteria 4096
42 Ga0075364_10021854 3300006051 Bacteria 4034
43 Ga0075364_10040452 3300006051 Bacteria 3024
44 Ga0075364_10062153 3300006051 Bacteria 2450
45 Ga0075364_10071830 3300006051 Bacteria 2280
46 Ga0075364_10095054 3300006051 Bacteria 1981
47 Ga0075364_10185695 3300006051 Bacteria 1408
48 Ga0075364_10207728 3300006051 Bacteria 1328
49 Ga0075364_10342711 3300006051 Bacteria 1018
50 Ga0075362_10004781 3300006177 Bacteria 4891
51 Ga0075362_10359426 3300006177 Bacteria 730
52 Ga0075367_10000700 3300006178 Bacteria 12914
53 Ga0075367_10004629 3300006178 Bacteria 6739
54 Ga0075367_10061169 3300006178 Bacteria 2247
55 Ga0075367_10172622 3300006178 Bacteria 1347
56 Ga0075367_10200180 3300006178 Bacteria 1248
57 Ga0075367_10355467 3300006178 Bacteria 925
58 Ga0075370_10032501 3300006353 Bacteria 2918
59 Ga0075370_10033439 3300006353 Bacteria 2879
60 Ga0075370_10072631 3300006353 Bacteria 1969
61 Ga0075370_10119987 3300006353 Bacteria 1530
62 Ga0075370_10508025 3300006353 Bacteria 728
63 Ga0075428_100000233 3300006844 Bacteria 54028
64 Ga0075431_100011165 3300006847 Bacteria 9042
65 Ga0075431_100249460 3300006847 Bacteria 1804
66 Ga0075429_100240768 3300006880 Bacteria 1585
67 Ga0068865_101166710 3300006881 Bacteria 681
68 Ga0068865_101369713 3300006881 Bacteria 631
69 Ga0111539_10688460 3300009094 Bacteria 1190
70 Ga0105243_10290090 3300009148 Bacteria 1478
71 Ga0105242_11448487 3300009176 Bacteria 716
72 Ga0105238_11692991 3300009551 Bacteria 663
73 Ga0105239_10823538 3300010375 Bacteria 1064
74 Ga0105239_11192378 3300010375 Bacteria 877
75 Ga0163163_10455327 3300014325 Bacteria 1340
76 Ga0157380_10040195 3300014326 Bacteria 3641
77 Ga0163161_10072717 3300017792 Bacteria 2518
78 Ga0163161_10187335 3300017792 Bacteria 1589
79 Ga0207687_10456724 3300025927 Bacteria 1060
80 Ga0207709_11266361 3300025935 Bacteria 609
81 Ga0207670_10699414 3300025936 Bacteria 839
82 Ga0207704_10921597 3300025938 Bacteria 736
83 Ga0207661_10563362 3300025944 Bacteria 1044
84 Ga0207658_10838892 3300025986 Bacteria 835
85 Ga0207708_10003867 3300026075 Bacteria 11018
86 Ga0207674_10201147 3300026116 Bacteria 1941
87 Ga0207675_100256318 3300026118 Bacteria 1694
88 Ga0207675_101111362 3300026118 Bacteria 810
89 Ga0209813_10001403 3300027866 Bacteria 5435
90 Ga0209813_10022154 3300027866 Bacteria 1794
91 Ga0209813_10033059 3300027866 Bacteria 1536
92 Ga0209813_10236723 3300027866 Bacteria 689
93 Ga0268264_10001886 3300028381 Bacteria 19044
94 Ga0316177_1068434 3300030731 Bacteria 750
95 Ga0316176_1056508 3300030732 Bacteria 891
96 Ga0314311_1223834 3300030733 Bacteria 1306
97 Ga0307408_100568462 3300031548 Bacteria 1003
98 Ga0307408_101068200 3300031548 Bacteria 747
99 Ga0316576_10007522 3300031727 Bacteria 6869
100 Ga0307405_10041424 3300031731 Bacteria 2796
101 Ga0307405_10489403 3300031731 Bacteria 983
102 Ga0307413_10140622 3300031824 Bacteria 1667
103 Ga0307410_10125675 3300031852 Bacteria 1877
104 Ga0307410_10192505 3300031852 Bacteria 1552
105 Ga0307410_10317385 3300031852 Bacteria 1235
106 Ga0307406_10171799 3300031901 Bacteria 1569
107 Ga0307406_10796193 3300031901 Bacteria 797
108 Ga0307407_10369252 3300031903 Bacteria 1021
109 Ga0307412_10114806 3300031911 Bacteria 1929
110 Ga0307412_10214022 3300031911 Bacteria 1473
111 Ga0307412_10511917 3300031911 Bacteria 1001
112 Ga0307409_100095108 3300031995 Bacteria 2454
113 Ga0307409_100114348 3300031995 Bacteria 2270
114 Ga0307409_100178882 3300031995 Bacteria 1875
115 Ga0307409_100298977 3300031995 Bacteria 1496
116 Ga0307409_100410664 3300031995 Bacteria 1296
117 Ga0307409_100973447 3300031995 Bacteria 865
118 Ga0307409_101308983 3300031995 Bacteria 750
119 Ga0307416_100002005 3300032002 Bacteria 11441
120 Ga0307416_100019120 3300032002 Bacteria 4849
121 Ga0307416_100255396 3300032002 Bacteria 1709
122 Ga0307414_10071837 3300032004 Bacteria 2498
123 Ga0307414_10281375 3300032004 Bacteria 1398
124 Ga0307411_10269225 3300032005 Bacteria 1350
125 Ga0307411_10827159 3300032005 Bacteria 817
126 Ga0307411_11429126 3300032005 Bacteria 634
127 Ga0307415_100029715 3300032126 Bacteria 3496
128 Ga0307415_100067652 3300032126 Bacteria 2497
129 Ga0307415_100206434 3300032126 Bacteria 1563
130 Ga0307415_100270904 3300032126 Bacteria 1391
131 Ga0307415_100580276 3300032126 Bacteria 994
132 Ga0316574_0086483 3300035398 Bacteria 1995
133 Ga0373931_0454576 3300035691 Bacteria 820
134 Ga0395899_0220542 3300037312 Bacteria 1314
135 Ga0395900_0542630 3300037418 Bacteria 1108
136 Ga0395898_0388604 3300037466 Bacteria 1331
137 Ga0395898_0706325 3300037466 Bacteria 950
138 Ga0395905_0108549 3300037471 Bacteria 2605
139 Ga0395905_0203910 3300037471 Bacteria 1854
140 Ga0395901_0179399 3300038443 Bacteria 2221
141 Ga0395901_0225579 3300038443 Bacteria 1957
142 Ga0395901_0395295 3300038443 Bacteria 1421
143 Ga0451807_0479207 3300041486 Bacteria 1007
144 Ga0451847_0730333 3300041503 Bacteria 823
145 Ga0450907_016068 3300042146 Bacteria 1248
146 Ga0439446_0227328 3300042156 Bacteria 637
147 Ga0451577_0238358 3300042876 Bacteria 1646
148 Ga0466972_0071992 3300044658 Bacteria 1649
149 Ga0466965_0014763 3300044683 Bacteria 3699
150 Ga0466965_0021285 3300044683 Bacteria 3120
151 Ga0466965_0132927 3300044683 Bacteria 1291
152 Ga0466965_0185301 3300044683 Bacteria 1099
153 Ga0466965_0224186 3300044683 Bacteria 1002
154 Ga0466961_0027818 3300044693 Bacteria 3636
155 Ga0466961_0038421 3300044693 Bacteria 3070
156 Ga0466961_0044135 3300044693 Bacteria 2853
157 Ga0466964_0411346 3300044706 Bacteria 709
158 Ga0466970_0009521 3300044765 Bacteria 4912
159 Ga0466970_0009638 3300044765 Bacteria 4887
160 Ga0466970_0034038 3300044765 Bacteria 2695
161 Ga0466970_0079371 3300044765 Bacteria 1772
162 Ga0466957_0026840 3300044842 Bacteria 3418
163 Ga0466960_0000721 3300044901 Bacteria 11557
164 Ga0466960_0011890 3300044901 Bacteria 3660
165 Ga0466960_0035021 3300044901 Bacteria 2343
166 Ga0466960_0139753 3300044901 Bacteria 1285
167 Ga0466960_0740197 3300044901 Bacteria 592
168 Ga0466959_0117211 3300045049 Bacteria 1896
169 Ga0466959_0552232 3300045049 Bacteria 777
170 Ga0466967_0140426 3300045976 Bacteria 2250
171 Ga0466967_0174939 3300045976 Bacteria 2022
172 Ga0466967_0217022 3300045976 Bacteria 1816
173 Ga0466967_0248894 3300045976 Bacteria 1697
174 Ga0466967_0675201 3300045976 Bacteria 1022
175 Ga0466967_1730892 3300045976 Bacteria 622
176 Ga0496100_0763302 3300048903 Bacteria 757
177 Ga0496100_1259874 3300048903 Bacteria 583
178 Ga0496101_0783829 3300048904 Bacteria 752
179 Ga0496102_1143328 3300048905 Bacteria 698
180 Ga0496104_0371294 3300048907 Bacteria 1343
181 Ga0496107_0154731 3300048910 Bacteria 1697
182 Ga0496108_0884458 3300048911 Bacteria 767
183 Ga0496109_0037427 3300048912 Bacteria 4383
184 Ga0496110_0260371 3300048913 Bacteria 1579
185 Ga0496111_0103176 3300048914 Bacteria 2097
186 Ga0496113_0181185 3300048916 Bacteria 1670
187 Ga0496124_0067607 3300048927 Bacteria 2973
188 Ga0501311_080751 3300049527 Bacteria 553
189 Ga0501320_035733 3300049536 Bacteria 635
190 Ga0501031_0013949 3300049568 Bacteria 5233
191 Ga0501031_0017243 3300049568 Bacteria 4692
192 Ga0501031_0076255 3300049568 Bacteria 2183
193 Ga0501031_0176435 3300049568 Bacteria 1396
194 Ga0501032_0020479 3300049569 Bacteria 4606
195 Ga0501032_0037180 3300049569 Bacteria 3320
196 Ga0501032_0038387 3300049569 Bacteria 3262
197 Ga0501033_0002022 3300049570 Bacteria 17648
198 Ga0501033_0220804 3300049570 Bacteria 1349
199 Ga0501034_0248178 3300049571 Bacteria 1724
200 Ga0501034_0292005 3300049571 Bacteria 1568
201 Ga0501036_0014635 3300049572 Bacteria 6537
202 Ga0501036_0016424 3300049572 Bacteria 6181
203 Ga0501036_0069883 3300049572 Bacteria 2969
204 Ga0501036_0272917 3300049572 Bacteria 1416
205 Ga0501037_0002261 3300049573 Bacteria 13916
206 Ga0501037_0006270 3300049573 Bacteria 8696
207 Ga0501037_0018223 3300049573 Bacteria 5173
208 Ga0501038_0003969 3300049574 Bacteria 13742
209 Ga0501038_0016119 3300049574 Bacteria 6783
210 Ga0501038_0060784 3300049574 Bacteria 3233
211 Ga0501038_0623024 3300049574 Bacteria 814
212 Ga0501039_0004308 3300049575 Bacteria 10730
213 Ga0501039_0041170 3300049575 Bacteria 3567
214 Ga0501039_0088281 3300049575 Bacteria 2415
215 Ga0501039_0288976 3300049575 Bacteria 1289
216 Ga0501039_0882943 3300049575 Bacteria 696
217 Ga0501040_0013756 3300049576 Bacteria 5324
218 Ga0501040_0049938 3300049576 Bacteria 2860
219 Ga0501040_0201193 3300049576 Bacteria 1414
220 Ga0501040_0517373 3300049576 Bacteria 860
221 Ga0501041_0019593 3300049577 Bacteria 4042
222 Ga0501041_0020037 3300049577 Bacteria 3995
223 Ga0501041_0136634 3300049577 Bacteria 1528
224 Ga0501042_0014938 3300049578 Bacteria 5308
225 Ga0501042_0037664 3300049578 Bacteria 3433
226 Ga0501042_0060821 3300049578 Bacteria 2698
227 Ga0501042_0065874 3300049578 Bacteria 2589
228 Ga0501043_0133791 3300049579 Bacteria 1943
229 Ga0501043_0219861 3300049579 Bacteria 1470
230 Ga0501046_0002085 3300049580 Bacteria 18962
231 Ga0501046_0014471 3300049580 Bacteria 6656
232 Ga0501046_0090643 3300049580 Bacteria 2352
233 Ga0501046_0115066 3300049580 Bacteria 2051
234 Ga0501046_0528336 3300049580 Bacteria 843
235 Ga0501047_0090190 3300049581 Bacteria 2942
236 Ga0501048_0005058 3300049582 Bacteria 10049
237 Ga0501048_0010113 3300049582 Bacteria 7054
238 Ga0501048_0028321 3300049582 Bacteria 4066
239 Ga0501048_0099273 3300049582 Bacteria 2054
240 Ga0501048_0110500 3300049582 Bacteria 1941
241 Ga0501067_0112910 3300049583 Bacteria 1511
242 Ga0501068_0010432 3300049584 Bacteria 5221
243 Ga0501068_0028888 3300049584 Bacteria 3282
244 Ga0501068_0108976 3300049584 Bacteria 1721
245 Ga0501068_0411087 3300049584 Bacteria 873
246 Ga0501068_0946762 3300049584 Bacteria 567
247 Ga0501069_0022512 3300049585 Bacteria 3429
248 Ga0501069_0106777 3300049585 Bacteria 1592
249 Ga0501069_0183140 3300049585 Bacteria 1211
250 Ga0501069_0424552 3300049585 Bacteria 788
251 Ga0501070_0075767 3300049586 Bacteria 2785
252 Ga0501070_0106657 3300049586 Bacteria 2315
253 Ga0501071_0004914 3300049587 Bacteria 8529
254 Ga0501071_0027029 3300049587 Bacteria 4034
255 Ga0501072_0008354 3300049588 Bacteria 7862
256 Ga0501072_0041567 3300049588 Bacteria 3611
257 Ga0501072_0129221 3300049588 Bacteria 2013
258 Ga0501072_0456739 3300049588 Bacteria 1011
259 Ga0501073_0082305 3300049589 Bacteria 2239
260 Ga0501073_0216258 3300049589 Bacteria 1324
261 Ga0501074_0094095 3300049590 Bacteria 2146
262 Ga0501075_0014239 3300049591 Bacteria 5698
263 Ga0501075_0107624 3300049591 Bacteria 2119
264 Ga0501075_0301887 3300049591 Bacteria 1220
265 Ga0501076_0006723 3300049592 Bacteria 8340
266 Ga0501076_0012417 3300049592 Bacteria 6365
267 Ga0501076_0038459 3300049592 Bacteria 3756
268 Ga0501077_0002870 3300049593 Bacteria 10340
269 Ga0501077_0020332 3300049593 Bacteria 4202
270 Ga0501261_023317 3300049690 Bacteria 900
271 Ga0501079_0002009 3300049741 Bacteria 14544
272 Ga0501079_0049897 3300049741 Bacteria 3230
273 Ga0501079_0061426 3300049741 Bacteria 2899
274 Ga0501079_0991226 3300049741 Bacteria 662
275 Ga0501080_0059084 3300049742 Bacteria 3569
276 Ga0501080_0380194 3300049742 Bacteria 1272
277 Ga0501081_0038029 3300049743 Bacteria 3286
278 Ga0501081_0165240 3300049743 Bacteria 1596
279 Ga0501083_0290361 3300049744 Bacteria 1064
280 Ga0501035_0028876 3300049822 Bacteria 5060
281 Ga0501035_0086035 3300049822 Bacteria 2770
282 Ga0501044_0013423 3300049823 Bacteria 8858
283 Ga0501044_0052653 3300049823 Bacteria 4192
284 Ga0501044_0100493 3300049823 Bacteria 2911
285 Ga0501044_0713917 3300049823 Bacteria 887
286 Ga0501045_0036577 3300049824 Bacteria 3566
287 nmdc:mga03683_11932_c1 3300050489 Bacteria 1730
288 nmdc:mga03n38_125848_c1 3300050490 Bacteria 1265
289 nmdc:mga03n38_14616_c1 3300050490 Bacteria 3014
290 nmdc:mga03n38_216544_c1 3300050490 Bacteria 998
291 nmdc:mga03n38_3001_c1 3300050490 Bacteria 5339
292 nmdc:mga03n38_32667_c1 3300050490 Bacteria 2207
293 nmdc:mga03n38_406384_c1 3300050490 Bacteria 750
294 nmdc:mga00v17_159876_c1 3300050491 Bacteria 1450
295 nmdc:mga00v17_214237_c1 3300050491 Bacteria 1247
296 nmdc:mga00v17_27150_c1 3300050491 Bacteria 3040
297 nmdc:mga00v17_360575_c1 3300050491 Bacteria 945
298 nmdc:mga00v17_55832_c1 3300050491 Bacteria 2413
299 nmdc:mga00v17_61707_c1 3300050491 Bacteria 2305
300 nmdc:mga00v17_68000_c1 3300050491 Bacteria 2202
301 nmdc:mga0yw44_10083_c1 3300050492 Bacteria 4810
302 nmdc:mga0yw44_103782_c1 3300050492 Bacteria 1814
303 nmdc:mga0yw44_108636_c1 3300050492 Bacteria 1775
304 nmdc:mga0yw44_131429_c1 3300050492 Bacteria 1621
305 nmdc:mga0yw44_135387_c1 3300050492 Bacteria 1598
306 nmdc:mga0yw44_149062_c1 3300050492 Bacteria 1525
307 nmdc:mga0yw44_169836_c1 3300050492 Bacteria 1431
308 nmdc:mga0yw44_212160_c1 3300050492 Bacteria 1281
309 nmdc:mga0yw44_236386_c1 3300050492 Bacteria 1214
310 nmdc:mga0yw44_248412_c1 3300050492 Bacteria 1184
311 nmdc:mga0yw44_2608_c1 3300050492 Bacteria 7749
312 nmdc:mga0yw44_578290_c1 3300050492 Bacteria 763
313 nmdc:mga0yw44_82506_c1 3300050492 Bacteria 2017
314 nmdc:mga0yw44_90334_c1 3300050492 Bacteria 1935
315 nmdc:mga0yw44_93846_c1 3300050492 Bacteria 1901
316 nmdc:mga06z11_192597_c1 3300050494 Bacteria 1181
317 nmdc:mga06z11_23142_c1 3300050494 Bacteria 2914
318 nmdc:mga06z11_28823_c1 3300050494 Bacteria 2668
319 nmdc:mga06z11_307143_c1 3300050494 Bacteria 944
320 nmdc:mga06z11_34321_c1 3300050494 Bacteria 2490
321 nmdc:mga06z11_3548_c1 3300050494 Bacteria 6046
322 nmdc:mga06z11_428134_c1 3300050494 Bacteria 798
323 nmdc:mga06z11_436003_c1 3300050494 Bacteria 791
324 nmdc:mga04h51_12530_c1 3300050495 Bacteria 2382
325 nmdc:mga04h51_220665_c1 3300050495 Bacteria 751
326 nmdc:mga04h51_268636_c1 3300050495 Bacteria 688
327 nmdc:mga07m45_128167_c1 3300050496 Bacteria 1468
328 nmdc:mga07m45_5029_c1 3300050496 Bacteria 6531
329 nmdc:mga07m45_672573_c1 3300050496 Bacteria 596
330 nmdc:mga07m45_80938_c1 3300050496 Bacteria 1855
331 nmdc:mga09592_232893_c1 3300050508 Bacteria 1596
332 nmdc:mga0qj67_478436_c1 3300050509 Bacteria 1002
333 nmdc:mga06r32_44398_c1 3300050510 Bacteria 4232
334 nmdc:mga06r32_764128_c1 3300050510 Bacteria 929
335 nmdc:mga08y16_192779_c1 3300050511 Bacteria 2113
336 Ga0500644_0000034 3300053088 Bacteria 83176
337 Ga0500641_0020871 3300053096 Bacteria 2490
338 Ga0500554_043303 3300053102 Bacteria 1390
339 Ga0500556_0003065 3300053104 Bacteria 5006
340 Ga0500593_001981 3300053117 Bacteria 7414
341 Ga0500655_020402 3300053133 Bacteria 1238
342 Ga0500568_0220456 3300053139 Bacteria 693
343 Ga0500573_0021460 3300053140 Bacteria 3701
344 Ga0500573_0092323 3300053140 Bacteria 1709
345 Ga0501084_0019474 3300054114 Bacteria 5654
346 Ga0501084_0102822 3300054114 Bacteria 2399
347 Ga0501084_0202201 3300054114 Bacteria 1676
348 Ga0501082_0095935 3300060353 Bacteria 2563
349 Ga0501082_0190060 3300060353 Bacteria 1786
350 Ga0466962_0072387 3300061719 Bacteria 1647
351 Ga0466962_0235867 3300061719 Bacteria 897
352 Ga0466962_0239280 3300061719 Bacteria 891
353 Ga0530510_0125235 3300061734 Bacteria 1888
354 2643891036 2643221576 Bacteria 5214352
355 2643960092 2643221590 Bacteria 5214697
356 2644035034 2643221604 Bacteria 5014917
357 2644092271 2643221615 Bacteria 5487866
358 2644101130 2643221617 Bacteria 5139111
359 2644118011 2643221620 Bacteria 5134593
360 2644322074 2643221657 Bacteria 5490246
361 2738868772 2738541305 Bacteria 4910150
362 2774395415 2773857762 Bacteria 5971770
363 2809193746 2808606439 Bacteria 5952208
364 2812330181 2811994874 Bacteria 5367947
365 2812348476 2811994878 Bacteria 5992952
366 2857483742 2857481737 Bacteria 4761446
367 2891973788 2891968417 Bacteria 5821697
368 2984578258 2984576629 Bacteria 4248407
369 nmdc:mga03683_337718_c1
370 JGI24739J22299_10075878
371 Ga0006562J51391_1020109
372 Ga0006562J51391_1020111
373 Ga0070683_100154544
374 Ga0070689_100395015
375 Ga0070659_100945562
376 Ga0070667_100021443
377 Ga0070667_100162848
378 Ga0070700_100318567
379 Ga0070684_100481501
380 Ga0070702_100623299
381 Ga0068861_100070509
382 Ga0068861_101192430
383 Ga0068860_100003903
384 Ga0081539_10045703
385 Ga0075365_10001007
386 Ga0075365_10015472
387 Ga0075365_10018003
388 Ga0075365_10018361
389 Ga0075365_10039633
390 Ga0075365_10088642
391 Ga0075365_10090733
392 Ga0075365_10108272
393 Ga0075365_10201482
394 Ga0075365_10309284
395 Ga0075365_10407569
396 Ga0075365_10415667
397 Ga0075365_10481944
398 Ga0075365_10500942
399 Ga0075368_10006249
400 Ga0075368_10022923
401 Ga0075368_10047260
402 Ga0075363_100014907
403 Ga0075363_100043379
404 Ga0075363_100079539
405 Ga0075363_100095267
406 Ga0075363_100110057
407 Ga0075363_100130811
408 Ga0075364_10008017
409 Ga0075364_10021174
410 Ga0075364_10021854
411 Ga0075364_10040452
412 Ga0075364_10062153
413 Ga0075364_10071830
414 Ga0075364_10095054
415 Ga0075364_10185695
416 Ga0075364_10207728
417 Ga0075364_10342711
418 Ga0075362_10004781
419 Ga0075362_10359426
420 Ga0075367_10000700
421 Ga0075367_10004629
422 Ga0075367_10061169
423 Ga0075367_10172622
424 Ga0075367_10200180
425 Ga0075367_10355467
426 Ga0075370_10032501
427 Ga0075370_10033439
428 Ga0075370_10072631
429 Ga0075370_10119987
430 Ga0075370_10508025
431 Ga0075428_100000233
432 Ga0075431_100011165
433 Ga0075431_100249460
434 Ga0075429_100240768
435 Ga0068865_101166710
436 Ga0068865_101369713
437 Ga0111539_10688460
438 Ga0105243_10290090
439 Ga0105242_11448487
440 Ga0105238_11692991
441 Ga0105239_10823538
442 Ga0105239_11192378
443 Ga0163163_10455327
444 Ga0157380_10040195
445 Ga0163161_10072717
446 Ga0163161_10187335
447 Ga0207687_10456724
448 Ga0207709_11266361
449 Ga0207670_10699414
450 Ga0207704_10921597
451 Ga0207661_10563362
452 Ga0207658_10838892
453 Ga0207708_10003867
454 Ga0207674_10201147
455 Ga0207675_100256318
456 Ga0207675_101111362
457 Ga0209813_10001403
458 Ga0209813_10022154
459 Ga0209813_10033059
460 Ga0209813_10236723
461 Ga0268264_10001886
462 Ga0316177_1068434
463 Ga0316176_1056508
464 Ga0314311_1223834
465 Ga0307408_100568462
466 Ga0307408_101068200
467 Ga0316576_10007522
468 Ga0307405_10041424
469 Ga0307405_10489403
470 Ga0307413_10140622
471 Ga0307410_10125675
472 Ga0307410_10192505
473 Ga0307410_10317385
474 Ga0307406_10171799
475 Ga0307406_10796193
476 Ga0307407_10369252
477 Ga0307412_10114806
478 Ga0307412_10214022
479 Ga0307412_10511917
480 Ga0307409_100095108
481 Ga0307409_100114348
482 Ga0307409_100178882
483 Ga0307409_100298977
484 Ga0307409_100410664
485 Ga0307409_100973447
486 Ga0307409_101308983
487 Ga0307416_100002005
488 Ga0307416_100019120
489 Ga0307416_100255396
490 Ga0307414_10071837
491 Ga0307414_10281375
492 Ga0307411_10269225
493 Ga0307411_10827159
494 Ga0307411_11429126
495 Ga0307415_100029715
496 Ga0307415_100067652
497 Ga0307415_100206434
498 Ga0307415_100270904
499 Ga0307415_100580276
500 Ga0316574_0086483
501 Ga0373931_0454576
502 Ga0395899_0220542
503 Ga0395900_0542630
504 Ga0395898_0388604
505 Ga0395898_0706325
506 Ga0395905_0108549
507 Ga0395905_0203910
508 Ga0395901_0179399
509 Ga0395901_0225579
510 Ga0395901_0395295
511 Ga0451807_0479207
512 Ga0451847_0730333
513 Ga0450907_016068
514 Ga0439446_0227328
515 Ga0451577_0238358
516 Ga0466972_0071992
517 Ga0466965_0014763
518 Ga0466965_0021285
519 Ga0466965_0132927
520 Ga0466965_0185301
521 Ga0466965_0224186
522 Ga0466961_0027818
523 Ga0466961_0038421
524 Ga0466961_0044135
525 Ga0466964_0411346
526 Ga0466970_0009521
527 Ga0466970_0009638
528 Ga0466970_0034038
529 Ga0466970_0079371
530 Ga0466957_0026840
531 Ga0466960_0000721
532 Ga0466960_0011890
533 Ga0466960_0035021
534 Ga0466960_0139753
535 Ga0466960_0740197
536 Ga0466959_0117211
537 Ga0466959_0552232
538 Ga0466967_0140426
539 Ga0466967_0174939
540 Ga0466967_0217022
541 Ga0466967_0248894
542 Ga0466967_0675201
543 Ga0466967_1730892
544 Ga0496100_0763302
545 Ga0496100_1259874
546 Ga0496101_0783829
547 Ga0496102_1143328
548 Ga0496104_0371294
549 Ga0496107_0154731
550 Ga0496108_0884458
551 Ga0496109_0037427
552 Ga0496110_0260371
553 Ga0496111_0103176
554 Ga0496113_0181185
555 Ga0496124_0067607
556 Ga0501311_080751
557 Ga0501320_035733
558 Ga0501031_0013949
559 Ga0501031_0017243
560 Ga0501031_0076255
561 Ga0501031_0176435
562 Ga0501032_0020479
563 Ga0501032_0037180
564 Ga0501032_0038387
565 Ga0501033_0002022
566 Ga0501033_0220804
567 Ga0501034_0248178
568 Ga0501034_0292005
569 Ga0501036_0014635
570 Ga0501036_0016424
571 Ga0501036_0069883
572 Ga0501036_0272917
573 Ga0501037_0002261
574 Ga0501037_0006270
575 Ga0501037_0018223
576 Ga0501038_0003969
577 Ga0501038_0016119
578 Ga0501038_0060784
579 Ga0501038_0623024
580 Ga0501039_0004308
581 Ga0501039_0041170
582 Ga0501039_0088281
583 Ga0501039_0288976
584 Ga0501039_0882943
585 Ga0501040_0013756
586 Ga0501040_0049938
587 Ga0501040_0201193
588 Ga0501040_0517373
589 Ga0501041_0019593
590 Ga0501041_0020037
591 Ga0501041_0136634
592 Ga0501042_0014938
593 Ga0501042_0037664
594 Ga0501042_0060821
595 Ga0501042_0065874
596 Ga0501043_0133791
597 Ga0501043_0219861
598 Ga0501046_0002085
599 Ga0501046_0014471
600 Ga0501046_0090643
601 Ga0501046_0115066
602 Ga0501046_0528336
603 Ga0501047_0090190
604 Ga0501048_0005058
605 Ga0501048_0010113
606 Ga0501048_0028321
607 Ga0501048_0099273
608 Ga0501048_0110500
609 Ga0501067_0112910
610 Ga0501068_0010432
611 Ga0501068_0028888
612 Ga0501068_0108976
613 Ga0501068_0411087
614 Ga0501068_0946762
615 Ga0501069_0022512
616 Ga0501069_0106777
617 Ga0501069_0183140
618 Ga0501069_0424552
619 Ga0501070_0075767
620 Ga0501070_0106657
621 Ga0501071_0004914
622 Ga0501071_0027029
623 Ga0501072_0008354
624 Ga0501072_0041567
625 Ga0501072_0129221
626 Ga0501072_0456739
627 Ga0501073_0082305
628 Ga0501073_0216258
629 Ga0501074_0094095
630 Ga0501075_0014239
631 Ga0501075_0107624
632 Ga0501075_0301887
633 Ga0501076_0006723
634 Ga0501076_0012417
635 Ga0501076_0038459
636 Ga0501077_0002870
637 Ga0501077_0020332
638 Ga0501261_023317
639 Ga0501079_0002009
640 Ga0501079_0049897
641 Ga0501079_0061426
642 Ga0501079_0991226
643 Ga0501080_0059084
644 Ga0501080_0380194
645 Ga0501081_0038029
646 Ga0501081_0165240
647 Ga0501083_0290361
648 Ga0501035_0028876
649 Ga0501035_0086035
650 Ga0501044_0013423
651 Ga0501044_0052653
652 Ga0501044_0100493
653 Ga0501044_0713917
654 Ga0501045_0036577
655 nmdc:mga03683_11932_c1
656 nmdc:mga03n38_125848_c1
657 nmdc:mga03n38_14616_c1
658 nmdc:mga03n38_216544_c1
659 nmdc:mga03n38_3001_c1
660 nmdc:mga03n38_32667_c1
661 nmdc:mga03n38_406384_c1
662 nmdc:mga00v17_159876_c1
663 nmdc:mga00v17_214237_c1
664 nmdc:mga00v17_27150_c1
665 nmdc:mga00v17_360575_c1
666 nmdc:mga00v17_55832_c1
667 nmdc:mga00v17_61707_c1
668 nmdc:mga00v17_68000_c1
669 nmdc:mga0yw44_10083_c1
670 nmdc:mga0yw44_103782_c1
671 nmdc:mga0yw44_108636_c1
672 nmdc:mga0yw44_131429_c1
673 nmdc:mga0yw44_135387_c1
674 nmdc:mga0yw44_149062_c1
675 nmdc:mga0yw44_169836_c1
676 nmdc:mga0yw44_212160_c1
677 nmdc:mga0yw44_236386_c1
678 nmdc:mga0yw44_248412_c1
679 nmdc:mga0yw44_2608_c1
680 nmdc:mga0yw44_578290_c1
681 nmdc:mga0yw44_82506_c1
682 nmdc:mga0yw44_90334_c1
683 nmdc:mga0yw44_93846_c1
684 nmdc:mga06z11_192597_c1
685 nmdc:mga06z11_23142_c1
686 nmdc:mga06z11_28823_c1
687 nmdc:mga06z11_307143_c1
688 nmdc:mga06z11_34321_c1
689 nmdc:mga06z11_3548_c1
690 nmdc:mga06z11_428134_c1
691 nmdc:mga06z11_436003_c1
692 nmdc:mga04h51_12530_c1
693 nmdc:mga04h51_220665_c1
694 nmdc:mga04h51_268636_c1
695 nmdc:mga07m45_128167_c1
696 nmdc:mga07m45_5029_c1
697 nmdc:mga07m45_672573_c1
698 nmdc:mga07m45_80938_c1
699 nmdc:mga09592_232893_c1
700 nmdc:mga0qj67_478436_c1
701 nmdc:mga06r32_44398_c1
702 nmdc:mga06r32_764128_c1
703 nmdc:mga08y16_192779_c1
704 Ga0500644_0000034
705 Ga0500641_0020871
706 Ga0500554_043303
707 Ga0500556_0003065
708 Ga0500593_001981
709 Ga0500655_020402
710 Ga0500568_0220456
711 Ga0500573_0021460
712 Ga0500573_0092323
713 Ga0501084_0019474
714 Ga0501084_0102822
715 Ga0501084_0202201
716 Ga0501082_0095935
717 Ga0501082_0190060
718 Ga0466962_0072387
719 Ga0466962_0235867
720 Ga0466962_0239280
721 Ga0530510_0125235
722 2643891036
723 2643960092
724 2644035034
725 2644092271
726 2644101130
727 2644118011
728 2644322074
729 2738868772
730 2774395415
731 2809193746
732 2812330181
733 2812348476
734 2857483742
735 2891973788
736 2984578258

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00160

Pro_isomerase

Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

39

200

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
1w74-assembly2.cif.gz_B x-ray structure of peptidyl-prolyl cis-trans isomerase a, ppia, rv0009, from mycobacterium tuberculosis. 0.9425 1 168
1w74-assembly2.cif.gz_B x-ray structure of peptidyl-prolyl cis-trans isomerase a, ppia, rv0009, from mycobacterium tuberculosis. 0.9371 1 168
1zkc-assembly2.cif.gz_B crystal structure of the cyclophiln_ring domain of human peptidylprolyl isomerase (cyclophilin)-like 2 isoform b 0.9298 4 167
6lkb-assembly1.cif.gz_B crystal structure of the peptidylprolyl isomerase domain of arabidopsis thaliana cyp71. 0.9274 4 165
3jb9-assembly1.cif.gz_d cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution 0.9231 4 168
ID Description Score Start End Superfamily
1w74B00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9425 1 168 2.40.100.10
1w74B00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9371 1 168 2.40.100.10
af_Q9FJX0_326_510_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9215 4 168 2.40.100.10
af_A0A0R4J2Z8_2_164_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9173 4 168 2.40.100.10
1xyhA00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.8997 5 168 2.40.100.10
ID Description Score Start End GO Terms
AF-A0A495JKP2-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9654 4 168 GO:0140839
GO:0140840
AF-A0A538NC15-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9652 1 168 GO:0006457
GO:0140839
GO:0140840
AF-A0A1F7JZU8-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9618 4 168 GO:0006457
GO:0140839
GO:0140840
AF-A0A349AZB7-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9604 4 143 GO:0006457
GO:0140839
GO:0140840
AF-A0A538E436-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9597 4 168 GO:0006457
GO:0140839
GO:0140840

Map