F424802

General Info

Members Datasets Scaffolds Average Seq Length
368 245 313 405

Family's Representative Sequence

Representative Sequence 3300044712|Ga0453684_0041255|Ga0453684_0041255_2147_3370
Length 401
Sequence MIRRIAHLDMDAFYASVELLRYPQLKGLPVVIGGSRRSVDNALMQAHGDRPLNQIALSEFPKLADYTGRGVITTATYAARQSGVGSAMGLMKAAKLCPQAILLPVDFAEYRRYSRLFKDIILDIAPLMEDRGVDEVYIDFTEVPGGQRDGGRVLARLIQKTIFQQTGLTCSVGVAPNKLLAKMASEFNKPNGIAIVYEEDLSGMIWPLACRKINGIGPKADGIRTIGELAQRDVGWLIDHFGQKTGAWLFDASHGKDTRPVVLESEPVSMSRETTFDRDLHAVRDKAELGDIFTRLCEQVAGDLQRKGYVGKTIGIKLRYDDFKIVTRDQTLEKYTADAQTIRQTAGQCLKRVPLTKRLRLLGVRVGSLLKTDDLQEKCVIPITKKGQEAINSIAIEPQLF

Samples

Sample ID Description Type Environment
1 2511231002 Polaromonas sp. CF318 Isolate Rhizosphere
2 2513020051 Variovorax sp. CF313 Isolate Rhizosphere
3 2547132374 Acidovorax radicis N35 Isolate Unclassified
4 2599185214 Variovorax sp. NFACC26 Isolate Rhizoplane
5 2599185226 Variovorax sp. NFACC27 Isolate Rhizoplane
6 2599185227 Variovorax sp. NFACC28 Isolate Rhizoplane
7 2599185229 Variovorax sp. NFACC29 Isolate Endosphere
8 2643221570 Acidovorax sp. Root568 Isolate Unclassified
9 2643221628 Variovorax sp. Root318D1 Isolate Unclassified
10 2643221652 Acidovorax sp. Root402 Isolate Unclassified
11 2643221658 Variovorax sp. Root411 Isolate Unclassified
12 2643221672 Variovorax sp. Root434 Isolate Unclassified
13 2643221683 Variovorax sp. Root473 Isolate Unclassified
14 2643221717 Acidovorax sp. Root267 Isolate Unclassified
15 2738541277 Variovorax sp. GV051 Isolate Unclassified
16 2738541307 Variovorax sp. GV008 Isolate Unclassified
17 2738543013 Variovorax sp. BT01 Isolate Unclassified
18 2738543019 Variovorax sp. GV040 Isolate Unclassified
19 2818991446 Variovorax sp. 1180 Isolate Unclassified
20 2831265667 Variovorax guangxiensis DSM 27352 Isolate Rhizosphere
21 2838054893 Variovorax guangxiensis 34/80 Isolate Nodule
22 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
23 2842677519 Variovorax sp. R-72495 Isolate Unclassified
24 2842718218 Acidovorax sp. R-73343 Isolate Unclassified
25 2842733646 Variovorax sp. R-72446 Isolate Unclassified
26 2842747753 Variovorax sp. R-72060 Isolate Unclassified
27 2881101125 Ramlibacter rhizophilus CCTCC AB2015357 Isolate Rhizosphere
28 2885192300 Variovorax sp. MHTC-1 Isolate Rhizosphere
29 2885198086 Variovorax sp. 679 Isolate Unclassified
30 2885211737 Variovorax sp. 553 Isolate Unclassified
31 2894023352 Diaphorobacter ruginosibacter DSM 27467 Isolate Nodule
32 2899924645 Variovorax sp. 369 Isolate Unclassified
33 2904449895 Variovorax sp. 1763 Isolate Rhizosphere
34 2904456579 Variovorax sp. 2002 Isolate Unclassified
35 2904479285 Comamonas sediminis 4487 Isolate Rhizosphere
36 2904541872 Variovorax sp. 1615 Isolate Rhizosphere
37 2919462493 Variovorax sp. 3319 Isolate Rhizosphere
38 2919704043 Hydrogenophaga palleronii 4249 Isolate Unclassified
39 2928037797 Variovorax sp. 1126 Isolate Unclassified
40 2928044640 Variovorax sp. 1128 Isolate Unclassified
41 2928051484 Variovorax sp. 1133 Isolate Unclassified
42 2928064002 Variovorax sp. 1140 Isolate Rhizosphere
43 2928070936 Variovorax gossypii 1167 Isolate Unclassified
44 2928084124 Variovorax paradoxus 1218 Isolate Unclassified
45 2928115317 Pseudacidovorax sp. 1753 Isolate Rhizosphere
46 2929160207 Variovorax sp. R-72349 Hybrid assembly Isolate Unclassified
47 2929520902 Variovorax beijingensis 502 Isolate Unclassified
48 2939631187 Ottowia thiooxydans 2709 Isolate Rhizosphere
49 2945909444 Variovorax sp. CRF3-Va-1 W1I1 Isolate Rhizosphere
50 2945945610 Variovorax paradoxus W1I18 Isolate Rhizosphere
51 2945972063 Variovorax paradoxus W2I8 Isolate Rhizosphere
52 2945984333 Variovorax sp. W2I14 Isolate Rhizosphere
53 2954767861 Variovorax sp. TBS-050B Isolate Rhizosphere
54 2974320154 Acidovorax wautersii SORGH_AS 335 Isolate Unclassified
55 2990710928 Acidovorax delafieldii SLBN-75 Isolate Rhizosphere
56 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
57 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
58 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
59 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
60 3300002774 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA Metagenome Endosphere
61 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
62 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
63 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
64 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
65 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
66 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
67 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
68 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
69 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
70 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
71 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
72 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
73 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
74 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
75 3300003792 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 Metagenome Endosphere
76 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
77 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
78 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
79 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
80 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
81 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
82 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
83 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
84 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
85 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
86 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
87 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
88 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
89 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
90 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
91 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
92 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
93 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
94 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
95 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
96 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
97 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
98 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
99 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
100 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
101 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
102 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
103 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
104 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
105 3300012502 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610 Metagenome Rhizosphere
106 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
107 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
108 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
109 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
110 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
111 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
112 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
113 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
114 3300015683 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_F04 Metagenome Rhizosphere
115 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
116 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
117 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
118 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
119 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
120 3300025245 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mTSA (SPAdes) (version 3) Metagenome Endosphere
121 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
122 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
123 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
124 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
125 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
126 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
127 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
128 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
129 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
130 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
131 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
132 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
133 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
134 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
135 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
136 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
137 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
138 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
139 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
146 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
147 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
148 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
149 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
150 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
151 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
152 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
153 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
154 3300027614 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes) (version 2) Metagenome Rhizosphere
155 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
156 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
157 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
158 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
159 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
160 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
161 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
162 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
163 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
164 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
165 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
166 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
167 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
168 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
169 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
170 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
171 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
172 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
173 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
174 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
175 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
176 3300041406 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503DE14Z070717_5284 Metagenome Rhizosphere
177 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
178 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
179 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
180 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
181 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
182 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
183 3300042006 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z080117_5437 Metagenome Rhizosphere
184 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
185 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
186 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
187 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
188 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
189 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
190 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
191 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
192 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
193 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
194 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
195 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
196 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
197 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
198 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
199 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
200 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
201 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
202 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
203 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
204 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
205 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
206 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
207 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
208 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
209 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
210 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
211 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
212 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
213 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
214 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
215 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
216 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
217 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
218 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
219 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
220 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
221 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
222 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
223 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
224 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
225 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
226 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
227 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
228 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
229 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
230 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
231 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
232 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
233 3300049759 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C13_A_4_drought Metagenome Rhizosphere
234 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
235 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
236 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
237 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
238 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
239 3300053110 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 endosphere Metagenome Endosphere
240 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
241 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
242 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
243 3300053141 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 endosphere Metagenome Endosphere
244 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
245 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 85.05
Metatranscriptomes 0
Isolates 14.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 33.42
Nodule 1.63
Rhizoplane 1.9
Rhizosphere 45.92
Stem 0
Stem Tuber 0
Unclassified 17.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000240 3300002704 Bacteria 21244
2 JGI25156J39149_1000031 3300002705 Bacteria 124983
3 JGI25154J39366_1000049 3300002738 Bacteria 124995
4 JGI25157J39369_1000041 3300002741 Bacteria 124982
5 JGI25150J39212_1009653 3300002774 Bacteria 1827
6 JGI25159J45721_1000763 3300002987 Bacteria 13973
7 JGI25151J46595_10000775 3300003187 Bacteria 25895
8 JGI25151J46595_10009198 3300003187 Bacteria 4699
9 JGI25153J46596_10031966 3300003215 Bacteria 1762
10 JGI25160J50197_1000264 3300003354 Bacteria 39557
11 JGI25160J50197_1023991 3300003354 Bacteria 1742
12 JGI25161J50226_1000198 3300003374 Bacteria 39503
13 Ga0055535_1000674 3300003761 Bacteria 26614
14 Ga0055542_1000022 3300003762 Bacteria 302315
15 Ga0055526_1002328 3300003771 Bacteria 12920
16 Ga0055526_1004788 3300003771 Bacteria 8014
17 Ga0055537_1000134 3300003773 Bacteria 56046
18 Ga0055537_1000465 3300003773 Bacteria 25517
19 Ga0055537_1003666 3300003773 Bacteria 4656
20 Ga0055537_1003837 3300003773 Bacteria 4498
21 Ga0055524_1000114 3300003775 Bacteria 94476
22 Ga0055536_1020457 3300003781 Bacteria 2042
23 Ga0055534_1000088 3300003784 Bacteria 72004
24 Ga0055534_1001977 3300003784 Bacteria 7492
25 Ga0055534_1002166 3300003784 Bacteria 7014
26 Ga0055528_1000135 3300003790 Bacteria 59436
27 Ga0055528_1000493 3300003790 Bacteria 31199
28 Ga0055530_10000923 3300003791 Bacteria 24100
29 Ga0055530_10003872 3300003791 Bacteria 8197
30 Ga0055540_1000591 3300003792 Bacteria 26366
31 Ga0055540_1000784 3300003792 Bacteria 21495
32 Ga0055540_1005628 3300003792 Bacteria 5207
33 Ga0055531_10001027 3300003794 Bacteria 22094
34 Ga0055531_10001194 3300003794 Bacteria 19928
35 Ga0055531_10002201 3300003794 Bacteria 13271
36 Ga0055531_10011799 3300003794 Bacteria 4172
37 Ga0055543_1000886 3300004625 Bacteria 14219
38 Ga0065165_1015809 3300005262 Bacteria 2859
39 Ga0068868_100002663 3300005338 Bacteria 12389
40 Ga0068853_100014185 3300005539 Bacteria 6524
41 Ga0070672_100183818 3300005543 Bacteria 1743
42 Ga0068855_100165652 3300005563 Bacteria 2506
43 Ga0070664_100022282 3300005564 Bacteria 5224
44 Ga0068857_100167763 3300005577 Bacteria 1994
45 Ga0068856_100351838 3300005614 Bacteria 1492
46 Ga0068852_100058358 3300005616 Bacteria 3343
47 Ga0068864_100062833 3300005618 Bacteria 3218
48 Ga0068863_100007808 3300005841 Bacteria 10462
49 Ga0075365_10057947 3300006038 Bacteria 2578
50 Ga0075363_100000366 3300006048 Bacteria 13651
51 Ga0075367_10058024 3300006178 Bacteria 2303
52 Ga0075366_10040210 3300006195 Bacteria 2765
53 Ga0075370_10010757 3300006353 Bacteria 4795
54 Ga0075370_10012306 3300006353 Bacteria 4517
55 Ga0068871_100175681 3300006358 Bacteria 1838
56 Ga0075430_100077145 3300006846 Bacteria 2793
57 Ga0079104_1000002 3300006946 Bacteria 514469
58 Ga0099826_10001523 3300006948 Bacteria 14010
59 Ga0105244_10001060 3300009036 Bacteria 22991
60 Ga0105250_10000528 3300009092 Bacteria 26590
61 Ga0105240_10430153 3300009093 Bacteria 1481
62 Ga0105243_10002199 3300009148 Bacteria 16440
63 Ga0105243_10002695 3300009148 Bacteria 14753
64 Ga0105243_10003682 3300009148 Bacteria 12323
65 Ga0105248_10046265 3300009177 Bacteria 4877
66 Ga0105237_10227407 3300009545 Bacteria 1866
67 Ga0105238_10029018 3300009551 Bacteria 5635
68 Ga0105238_10088781 3300009551 Bacteria 3078
69 Ga0105238_10209620 3300009551 Bacteria 1924
70 Ga0157347_1000080 3300012502 Bacteria 4256
71 Ga0157373_10009944 3300013100 Bacteria 7010
72 Ga0157369_10031345 3300013105 Bacteria 5854
73 Ga0157372_10099653 3300013307 Bacteria 3314
74 Ga0157375_10239224 3300013308 Bacteria 1975
75 Ga0182008_10000345 3300014497 Bacteria 36123
76 Ga0182008_10010916 3300014497 Bacteria 4845
77 Ga0157379_10004634 3300014968 Bacteria 11797
78 Ga0157379_10149923 3300014968 Bacteria 2103
79 Ga0182006_1013068 3300015261 Bacteria 3614
80 Ga0182007_10005682 3300015262 Bacteria 5442
81 Ga0183362_10001 3300015683 Bacteria 2046624
82 Ga0163161_10000677 3300017792 Bacteria 27208
83 Ga0163161_10022137 3300017792 Bacteria 4474
84 Ga0163161_10054324 3300017792 Bacteria 2907
85 Ga0213872_10005479 3300021361 Bacteria 6523
86 Ga0209435_100014 3300025206 Bacteria 322129
87 Ga0209672_107821 3300025228 Bacteria 1623
88 Ga0209258_100009 3300025242 Bacteria 996276
89 Ga0207425_1000424 3300025245 Bacteria 28169
90 Ga0207425_1005697 3300025245 Bacteria 3512
91 Ga0207425_1007080 3300025245 Bacteria 2998
92 Ga0209646_1000001 3300025246 Bacteria 3092932
93 Ga0209026_1000073 3300025250 Bacteria 205399
94 Ga0209148_1000007 3300025254 Bacteria 1592273
95 Ga0209759_1000013 3300025256 Bacteria 399300
96 Ga0209129_1000024 3300025258 Bacteria 417268
97 Ga0209129_1000085 3300025258 Bacteria 181765
98 Ga0209129_1003396 3300025258 Bacteria 6979
99 Ga0209565_1000043 3300025263 Bacteria 235332
100 Ga0209565_1000046 3300025263 Bacteria 226073
101 Ga0209565_1000460 3300025263 Bacteria 31333
102 Ga0209565_1002799 3300025263 Bacteria 6037
103 Ga0209673_1000008 3300025273 Bacteria 626013
104 Ga0209673_1000058 3300025273 Bacteria 269028
105 Ga0209673_1000571 3300025273 Bacteria 58695
106 Ga0209673_1000585 3300025273 Bacteria 57304
107 Ga0209130_1000181 3300025284 Bacteria 89402
108 Ga0209130_1000314 3300025284 Bacteria 57024
109 Ga0209130_1005682 3300025284 Bacteria 4259
110 Ga0209675_1000010 3300025291 Bacteria 541927
111 Ga0209675_1000136 3300025291 Bacteria 99301
112 Ga0209675_1000387 3300025291 Bacteria 36710
113 Ga0209675_1002401 3300025291 Bacteria 9669
114 Ga0209675_1002482 3300025291 Bacteria 9452
115 Ga0209676_1000023 3300025292 Bacteria 589732
116 Ga0209676_1000028 3300025292 Bacteria 559745
117 Ga0209676_1000098 3300025292 Bacteria 234305
118 Ga0209676_1000173 3300025292 Bacteria 153411
119 Ga0209676_1000194 3300025292 Bacteria 136666
120 Ga0209676_1006569 3300025292 Bacteria 5700
121 Ga0209676_1012274 3300025292 Bacteria 3382
122 Ga0209025_1000122 3300025294 Bacteria 206064
123 Ga0209025_1000267 3300025294 Bacteria 121798
124 Ga0209025_1000404 3300025294 Bacteria 87744
125 Ga0209025_1002511 3300025294 Bacteria 19206
126 Ga0209025_1004276 3300025294 Bacteria 12545
127 Ga0209025_1007022 3300025294 Bacteria 8538
128 Ga0209564_1000183 3300025295 Bacteria 150409
129 Ga0209564_1000198 3300025295 Bacteria 138511
130 Ga0209564_1000279 3300025295 Bacteria 104927
131 Ga0209564_1000443 3300025295 Bacteria 71364
132 Ga0209758_1000049 3300025297 Bacteria 345104
133 Ga0209050_1000002 3300025298 Bacteria 1792849
134 Ga0209050_1000022 3300025298 Bacteria 565239
135 Ga0209050_1000122 3300025298 Bacteria 195305
136 Ga0209050_1000554 3300025298 Bacteria 61514
137 Ga0209050_1001990 3300025298 Bacteria 19146
138 Ga0209050_1009965 3300025298 Bacteria 4764
139 Ga0209256_1000001 3300025299 Bacteria 2166974
140 Ga0209256_1000098 3300025299 Bacteria 204152
141 Ga0209256_1000140 3300025299 Bacteria 152770
142 Ga0209256_1020245 3300025299 Bacteria 2084
143 Ga0207426_1000038 3300025302 Bacteria 441522
144 Ga0207426_1000053 3300025302 Bacteria 384818
145 Ga0207426_1000117 3300025302 Bacteria 224652
146 Ga0207426_1005711 3300025302 Bacteria 5608
147 Ga0209051_1000013 3300025303 Bacteria 565239
148 Ga0209051_1000159 3300025303 Bacteria 126836
149 Ga0209051_1000194 3300025303 Bacteria 107213
150 Ga0209051_1000282 3300025303 Bacteria 82787
151 Ga0209051_1000315 3300025303 Bacteria 73579
152 Ga0209051_1000597 3300025303 Bacteria 42565
153 Ga0209257_1000002 3300025304 Bacteria 1767052
154 Ga0209257_1000042 3300025304 Bacteria 537149
155 Ga0209257_1000309 3300025304 Bacteria 104166
156 Ga0209257_1000475 3300025304 Bacteria 73111
157 Ga0209257_1006929 3300025304 Bacteria 7083
158 Ga0207696_1006703 3300025711 Bacteria 4600
159 Ga0207655_1002463 3300025728 Bacteria 14994
160 Ga0207695_10064684 3300025913 Bacteria 3764
161 Ga0207681_10059496 3300025923 Bacteria 2619
162 Ga0207694_10034982 3300025924 Bacteria 3853
163 Ga0207644_10065063 3300025931 Bacteria 2651
164 Ga0207706_10030650 3300025933 Bacteria 4796
165 Ga0207686_10002239 3300025934 Bacteria 10628
166 Ga0207709_10000015 3300025935 Bacteria 493221
167 Ga0207709_10000285 3300025935 Bacteria 57630
168 Ga0207709_10000702 3300025935 Bacteria 26997
169 Ga0207709_10019595 3300025935 Bacteria 3808
170 Ga0207711_10153096 3300025941 Bacteria 2082
171 Ga0207667_10138467 3300025949 Bacteria 2506
172 Ga0207667_10143701 3300025949 Bacteria 2456
173 Ga0207676_10035216 3300026095 Bacteria 3798
174 Ga0207674_10255680 3300026116 Bacteria 1699
175 Ga0207698_10263509 3300026142 Bacteria 1584
176 Ga0209281_1000007 3300027111 Bacteria 938265
177 Ga0209970_1001095 3300027614 Bacteria 4772
178 Ga0209282_1000638 3300027666 Bacteria 17272
179 Ga0209813_10015954 3300027866 Bacteria 2042
180 Ga0209974_10006642 3300027876 Bacteria 4025
181 Ga0268265_10102932 3300028380 Bacteria 2311
182 Ga0307515_10006414 3300028794 Bacteria 23532
183 Ga0307515_10069164 3300028794 Bacteria 4833
184 Ga0265332_10000020 3300031238 Bacteria 219119
185 Ga0265340_10032337 3300031247 Bacteria 2612
186 Ga0307513_10000008 3300031456 Bacteria 442128
187 Ga0307513_10000020 3300031456 Bacteria 228745
188 Ga0307513_10026529 3300031456 Bacteria 6678
189 Ga0307513_10116886 3300031456 Bacteria 2645
190 Ga0307513_10216507 3300031456 Bacteria 1741
191 Ga0307408_100000841 3300031548 Bacteria 24263
192 Ga0307408_100001631 3300031548 Bacteria 16601
193 Ga0307408_100044427 3300031548 Bacteria 3165
194 Ga0307405_10036208 3300031731 Bacteria 2954
195 Ga0307405_10077134 3300031731 Bacteria 2164
196 Ga0307405_10168586 3300031731 Bacteria 1559
197 Ga0307413_10030739 3300031824 Bacteria 3020
198 Ga0307406_10016047 3300031901 Bacteria 4345
199 Ga0307412_10003671 3300031911 Bacteria 8530
200 Ga0307412_10120985 3300031911 Bacteria 1884
201 Ga0307412_10125104 3300031911 Bacteria 1858
202 Ga0307416_100021246 3300032002 Bacteria 4655
203 Ga0395899_0003383 3300037312 Bacteria 12655
204 Ga0395899_0008205 3300037312 Bacteria 8047
205 Ga0395899_0014906 3300037312 Bacteria 5930
206 Ga0395900_0014400 3300037418 Bacteria 8072
207 Ga0395900_0100628 3300037418 Bacteria 2969
208 Ga0395900_0321736 3300037418 Bacteria 1527
209 Ga0395898_0007471 3300037466 Bacteria 11604
210 Ga0395905_0000088 3300037471 Bacteria 152506
211 Ga0395905_0001245 3300037471 Bacteria 31535
212 Ga0395905_0006803 3300037471 Bacteria 11450
213 Ga0395905_0027092 3300037471 Bacteria 5404
214 Ga0395905_0073214 3300037471 Bacteria 3211
215 Ga0395905_0119526 3300037471 Bacteria 2476
216 Ga0395905_0278548 3300037471 Bacteria 1558
217 Ga0395901_0260956 3300038443 Bacteria 1803
218 Ga0436361_0399085 3300039447 Bacteria 26839
219 Ga0439436_0004004 3300041404 Bacteria 4513
220 Ga0439436_0004596 3300041404 Bacteria 4231
221 Ga0439439_0000693 3300041406 Bacteria 5974
222 Ga0439465_0005295 3300041413 Bacteria 4125
223 Ga0439465_0007765 3300041413 Bacteria 3401
224 Ga0451853_1911928 3300041512 Bacteria 1392
225 Ga0439431_0002507 3300041997 Bacteria 4061
226 Ga0439433_0004727 3300041999 Bacteria 2924
227 Ga0439442_017029 3300042002 Bacteria 1499
228 Ga0439445_0002872 3300042004 Bacteria 3846
229 Ga0439432_001404 3300042006 Bacteria 9074
230 Ga0439449_0000451 3300042007 Bacteria 15303
231 Ga0439449_0006190 3300042007 Bacteria 4574
232 Ga0439449_0008297 3300042007 Bacteria 3951
233 Ga0439449_0032888 3300042007 Bacteria 1932
234 Ga0439452_004145 3300042010 Bacteria 4924
235 Ga0439457_004637 3300042014 Bacteria 3554
236 Ga0450898_003792 3300042134 Bacteria 2194
237 Ga0450898_005039 3300042134 Bacteria 1979
238 Ga0439446_0001530 3300042156 Bacteria 5306
239 Ga0450908_000607 3300042184 Bacteria 6850
240 Ga0450908_007007 3300042184 Bacteria 2134
241 Ga0450909_004263 3300042185 Bacteria 2041
242 Ga0439434_0011865 3300042435 Bacteria 2576
243 Ga0439434_0013353 3300042435 Bacteria 2438
244 Ga0450893_0002538 3300042532 Bacteria 2849
245 Ga0451577_0005424 3300042876 Bacteria 13079
246 Ga0466966_0013281 3300044684 Bacteria 5452
247 Ga0453684_0000868 3300044712 Bacteria 101512
248 Ga0453684_0041255 3300044712 Bacteria 6247
249 Ga0451576_0038609 3300045051 Bacteria 5053
250 Ga0495638_0024691 3300046460 Bacteria 3914
251 Ga0495639_0007389 3300046475 Bacteria 4718
252 Ga0495610_0045932 3300046512 Bacteria 2158
253 Ga0495616_0006779 3300046513 Bacteria 6905
254 Ga0495631_0000427 3300046518 Bacteria 29158
255 Ga0495637_0010247 3300046520 Bacteria 4539
256 Ga0495643_0034482 3300046522 Bacteria 2792
257 Ga0495654_0012610 3300046530 Bacteria 4538
258 Ga0495598_0005246 3300046537 Bacteria 2860
259 Ga0495621_0000910 3300046539 Bacteria 7509
260 Ga0495633_0004036 3300046558 Bacteria 9496
261 Ga0495656_0006550 3300046615 Bacteria 4090
262 Ga0495656_0021142 3300046615 Bacteria 2531
263 Ga0495625_0000245 3300046660 Bacteria 85443
264 Ga0495625_0012103 3300046660 Bacteria 6999
265 Ga0495588_0010168 3300046674 Bacteria 4365
266 Ga0495588_0062214 3300046674 Bacteria 1934
267 Ga0495658_0022452 3300046683 Bacteria 3337
268 Ga0495593_0023610 3300047673 Bacteria 3416
269 Ga0495602_0072590 3300048088 Bacteria 2934
270 Ga0495614_0001785 3300048089 Bacteria 9404
271 Ga0495615_0005683 3300048090 Bacteria 2260
272 Ga0496101_0038939 3300048904 Bacteria 3378
273 Ga0496104_0031990 3300048907 Bacteria 4895
274 Ga0496105_0043063 3300048908 Bacteria 3723
275 Ga0496111_0085205 3300048914 Bacteria 2310
276 Ga0496116_0106807 3300048919 Bacteria 1656
277 Ga0496117_0018279 3300048920 Bacteria 5815
278 Ga0496117_0038493 3300048920 Bacteria 3544
279 Ga0496118_0004565 3300048921 Bacteria 16322
280 Ga0496118_0011867 3300048921 Bacteria 8442
281 Ga0496121_0041929 3300048924 Bacteria 3990
282 Ga0496121_0068466 3300048924 Bacteria 2871
283 Ga0496122_0000063 3300048925 Bacteria 241378
284 Ga0496122_0005215 3300048925 Bacteria 15596
285 Ga0496123_0000045 3300048926 Bacteria 249294
286 Ga0496123_0032539 3300048926 Bacteria 3773
287 Ga0496123_0059098 3300048926 Bacteria 2482
288 Ga0496124_0044387 3300048927 Bacteria 3814
289 Ga0496124_0080091 3300048927 Bacteria 2688
290 Ga0496125_0003904 3300048928 Bacteria 17599
291 Ga0496125_0019332 3300048928 Bacteria 6429
292 Ga0496125_0031933 3300048928 Bacteria 4684
293 Ga0501031_0027711 3300049568 Bacteria 3693
294 Ga0501037_0115740 3300049573 Bacteria 1930
295 Ga0501038_0079672 3300049574 Bacteria 2761
296 Ga0501046_0046885 3300049580 Bacteria 3428
297 Ga0501225_0001712 3300049705 Bacteria 6862
298 Ga0501262_001184 3300049759 Bacteria 2950
299 Ga0501035_0078691 3300049822 Bacteria 2912
300 nmdc:mga07m45_1588_c1 3300050496 Bacteria 10470
301 nmdc:mga0qj67_48181_c1 3300050509 Bacteria 3366
302 Ga0500610_0013190 3300053079 Bacteria 3835
303 Ga0500610_0034364 3300053079 Bacteria 2594
304 Ga0500651_0000167 3300053093 Bacteria 42663
305 Ga0500571_000040 3300053110 Bacteria 40510
306 Ga0500655_000054 3300053133 Bacteria 31184
307 Ga0500658_0000455 3300053134 Bacteria 17443
308 Ga0500658_0000549 3300053134 Bacteria 15790
309 Ga0500568_0001950 3300053139 Bacteria 12648
310 Ga0500574_001238 3300053141 Bacteria 3711
311 Ga0500616_0026517 3300053153 Bacteria 3206
312 Ga0500645_000090 3300053730 Bacteria 70818
313 Ga0500645_006891 3300053730 Bacteria 4012

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005841 Ga0068863_100007808 Ga0068863_1000078082 356
2 3300006358 Ga0068871_100175681 Ga0068871_1001756811 356
3 3300053153 Ga0500616_0026517 Ga0500616_0026517_17_1099 356
4 3300005338 Ga0068868_100002663 Ga0068868_1000026639 358
5 3300014968 Ga0157379_10004634 Ga0157379_100046347 358
6 3300025931 Ga0207644_10065063 Ga0207644_100650632 358
7 3300025941 Ga0207711_10153096 Ga0207711_101530962 358
8 3300046539 Ga0495621_0000910 Ga0495621_0000910_1543_2694 358
9 3300003354 JGI25160J50197_1023991 JGI25160J50197_10239912 363
10 3300037312 Ga0395899_0003383 Ga0395899_0003383_9993_11231 365
11 3300037466 Ga0395898_0007471 Ga0395898_0007471_7117_8355 365
12 3300028794 Ga0307515_10069164 Ga0307515_100691644 367
13 3300031456 Ga0307513_10116886 Ga0307513_101168861 367
14 3300049573 Ga0501037_0115740 Ga0501037_0115740_312_1595 367
15 3300046537 Ga0495598_0005246 Ga0495598_0005246_573_1784 368
16 3300041404 Ga0439436_0004596 Ga0439436_0004596_1233_2474 371
17 3300041413 Ga0439465_0005295 Ga0439465_0005295_1338_2579 371
18 3300041997 Ga0439431_0002507 Ga0439431_0002507_1338_2579 371
19 3300042004 Ga0439445_0002872 Ga0439445_0002872_1625_2866 371
20 3300042006 Ga0439432_001404 Ga0439432_001404_1338_2579 371
21 3300042007 Ga0439449_0032888 Ga0439449_0032888_479_1720 371
22 3300041413 Ga0439465_0007765 Ga0439465_0007765_391_1626 373
23 3300042134 Ga0450898_005039 Ga0450898_005039_66_1301 373
24 3300042184 Ga0450908_000607 Ga0450908_000607_3804_5039 373
25 3300042185 Ga0450909_004263 Ga0450909_004263_67_1302 373
26 3300042435 Ga0439434_0011865 Ga0439434_0011865_591_1826 373
27 3300037471 Ga0395905_0119526 Ga0395905_0119526_323_1567 374
28 3300013100 Ga0157373_10009944 Ga0157373_100099442 375
29 3300031731 Ga0307405_10168586 Ga0307405_101685862 375
30 3300042134 Ga0450898_003792 Ga0450898_003792_482_1729 375
31 3300044712 Ga0453684_0000868 Ga0453684_0000868_73677_74918 375
32 3300045051 Ga0451576_0038609 Ga0451576_0038609_2894_4093 375
33 3300006846 Ga0075430_100077145 Ga0075430_1000771454 376
34 3300014497 Ga0182008_10000345 Ga0182008_1000034523 376
35 3300050509 nmdc:mga0qj67_48181_c1 nmdc:mga0qj67_48181_c1_1654_2916 376
36 3300003792 Ga0055540_1000784 Ga0055540_100078420 377
37 3300021361 Ga0213872_10005479 Ga0213872_100054793 377
38 3300025303 Ga0209051_1000159 Ga0209051_100015943 377
39 3300039447 Ga0436361_0399085 Ga0436361_0399085_15520_16767 377
40 3300025292 Ga0209676_1000173 Ga0209676_100017374 378
41 3300025303 Ga0209051_1000282 Ga0209051_100028220 378
42 3300025934 Ga0207686_10002239 Ga0207686_100022393 378
43 3300025913 Ga0207695_10064684 Ga0207695_100646843 379
44 3300025924 Ga0207694_10034982 Ga0207694_100349822 379
45 3300048925 Ga0496122_0005215 Ga0496122_0005215_5695_6921 379
46 3300048928 Ga0496125_0003904 Ga0496125_0003904_5984_7210 379
47 3300009551 Ga0105238_10029018 Ga0105238_100290185 380
48 3300025949 Ga0207667_10143701 Ga0207667_101437012 380
49 3300003792 Ga0055540_1005628 Ga0055540_10056286 381
50 3300003794 Ga0055531_10002201 Ga0055531_100022016 381
51 3300025303 Ga0209051_1000315 Ga0209051_10003157 381
52 3300025304 Ga0209257_1000309 Ga0209257_100030919 381
53 iso_pu_bacteria 2894023352 2894026961 381
54 3300025935 Ga0207709_10000285 Ga0207709_1000028534 382
55 3300048926 Ga0496123_0059098 Ga0496123_0059098_448_1656 382
56 3300049568 Ga0501031_0027711 Ga0501031_0027711_397_1611 382
57 iso_pu_bacteria 2974320154 2974322530 382
58 3300005618 Ga0068864_100062833 Ga0068864_1000628332 383
59 3300009177 Ga0105248_10046265 Ga0105248_100462654 383
60 3300026095 Ga0207676_10035216 Ga0207676_100352163 383
61 3300042007 Ga0439449_0008297 Ga0439449_0008297_1781_3031 383
62 3300042876 Ga0451577_0005424 Ga0451577_0005424_10145_11368 383
63 3300044712 Ga0453684_0041255 Ga0453684_0041255_2147_3370 383
64 iso_pu_bacteria 2919704043 2919706395 383
65 3300025298 Ga0209050_1009965 Ga0209050_10099655 384
66 3300048919 Ga0496116_0106807 Ga0496116_0106807_65_1252 384
67 3300048924 Ga0496121_0068466 Ga0496121_0068466_208_1395 384
68 iso_pu_bacteria 2842718218 2842721382 384
69 iso_pu_bacteria 2904479285 2904481860 384
70 3300031238 Ga0265332_10000020 Ga0265332_10000020156 385
71 3300048904 Ga0496101_0038939 Ga0496101_0038939_1742_2929 385
72 3300048926 Ga0496123_0032539 Ga0496123_0032539_646_1833 385
73 iso_pu_bacteria 2643221683 2644464637 386
74 iso_pu_bacteria 2738541307 2738880204 386
75 3300006048 Ga0075363_100000366 Ga0075363_10000036612 387
76 3300006178 Ga0075367_10058024 Ga0075367_100580241 387
77 3300027614 Ga0209970_1001095 Ga0209970_10010952 387
78 3300027876 Ga0209974_10006642 Ga0209974_100066422 387
79 iso_pu_bacteria 2738541277 2738719183 387
80 iso_pu_bacteria 2738543019 2739281945 387
81 3300037418 Ga0395900_0100628 Ga0395900_0100628_1150_2361 388
82 3300046615 Ga0495656_0006550 Ga0495656_0006550_2576_3763 388
83 3300046615 Ga0495656_0021142 Ga0495656_0021142_1232_2491 388
84 3300048090 Ga0495615_0005683 Ga0495615_0005683_241_1461 388
85 iso_pu_bacteria 2818991446 2819599679 388
86 iso_pu_bacteria 2881101125 2881105500 388
87 3300006038 Ga0075365_10057947 Ga0075365_100579472 389
88 3300031911 Ga0307412_10125104 Ga0307412_101251042 389
89 3300037312 Ga0395899_0014906 Ga0395899_0014906_4350_5564 389
90 3300037418 Ga0395900_0321736 Ga0395900_0321736_330_1511 389
91 3300037471 Ga0395905_0000088 Ga0395905_0000088_23359_24651 389
92 3300037471 Ga0395905_0006803 Ga0395905_0006803_7967_9181 389
93 3300037471 Ga0395905_0027092 Ga0395905_0027092_2290_3504 389
94 3300037471 Ga0395905_0278548 Ga0395905_0278548_142_1323 389
95 3300038443 Ga0395901_0260956 Ga0395901_0260956_387_1568 389
96 3300044684 Ga0466966_0013281 Ga0466966_0013281_2352_3590 389
97 iso_pu_bacteria 2738543013 2739248088 389
98 3300017792 Ga0163161_10000677 Ga0163161_1000067721 390
99 3300031911 Ga0307412_10003671 Ga0307412_100036719 390
100 3300032002 Ga0307416_100021246 Ga0307416_1000212463 390
101 3300037471 Ga0395905_0001245 Ga0395905_0001245_23146_24372 390
102 iso_pu_bacteria 2945909444 2945913779 390
103 iso_pu_bacteria 2945984333 2945990829 390
104 3300003187 JGI25151J46595_10009198 JGI25151J46595_100091984 391
105 3300005577 Ga0068857_100167763 Ga0068857_1001677632 391
106 3300005614 Ga0068856_100351838 Ga0068856_1003518382 391
107 3300006946 Ga0079104_1000002 Ga0079104_1000002370 391
108 3300009092 Ga0105250_10000528 Ga0105250_1000052825 391
109 3300009093 Ga0105240_10430153 Ga0105240_104301531 391
110 3300009148 Ga0105243_10002695 Ga0105243_1000269513 391
111 3300009551 Ga0105238_10209620 Ga0105238_102096201 391
112 3300025294 Ga0209025_1000404 Ga0209025_100040428 391
113 3300025711 Ga0207696_1006703 Ga0207696_10067034 391
114 3300025935 Ga0207709_10000015 Ga0207709_10000015344 391
115 3300026116 Ga0207674_10255680 Ga0207674_102556802 391
116 3300027111 Ga0209281_1000007 Ga0209281_1000007586 391
117 3300031247 Ga0265340_10032337 Ga0265340_100323372 391
118 3300037312 Ga0395899_0008205 Ga0395899_0008205_6372_7562 391
119 3300037418 Ga0395900_0014400 Ga0395900_0014400_4559_5782 391
120 3300037471 Ga0395905_0073214 Ga0395905_0073214_480_1703 391
121 3300042007 Ga0439449_0000451 Ga0439449_0000451_9737_10981 391
122 3300046558 Ga0495633_0004036 Ga0495633_0004036_3253_4482 391
123 3300048927 Ga0496124_0044387 Ga0496124_0044387_2471_3661 391
124 3300049574 Ga0501038_0079672 Ga0501038_0079672_545_1765 391
125 3300049580 Ga0501046_0046885 Ga0501046_0046885_1603_2823 391
126 3300049822 Ga0501035_0078691 Ga0501035_0078691_527_1747 391
127 iso_pu_bacteria 2839138175 2839139796 391
128 iso_pu_bacteria 2904541872 2904549850 391
129 iso_pu_bacteria 2928115317 2928117615 391
130 iso_pu_bacteria 2929160207 2929161820 391
131 3300002774 JGI25150J39212_1009653 JGI25150J39212_10096532 392
132 3300003187 JGI25151J46595_10000775 JGI25151J46595_100007754 392
133 3300003215 JGI25153J46596_10031966 JGI25153J46596_100319662 392
134 3300003761 Ga0055535_1000674 Ga0055535_100067417 392
135 3300003762 Ga0055542_1000022 Ga0055542_1000022143 392
136 3300003773 Ga0055537_1000134 Ga0055537_100013439 392
137 3300003773 Ga0055537_1003837 Ga0055537_10038376 392
138 3300003784 Ga0055534_1000088 Ga0055534_100008839 392
139 3300003790 Ga0055528_1000493 Ga0055528_100049314 392
140 3300003791 Ga0055530_10003872 Ga0055530_100038725 392
141 3300003794 Ga0055531_10001194 Ga0055531_1000119413 392
142 3300003794 Ga0055531_10011799 Ga0055531_100117992 392
143 3300005539 Ga0068853_100014185 Ga0068853_1000141856 392
144 3300005564 Ga0070664_100022282 Ga0070664_1000222821 392
145 3300005616 Ga0068852_100058358 Ga0068852_1000583584 392
146 3300006195 Ga0075366_10040210 Ga0075366_100402103 392
147 3300006353 Ga0075370_10010757 Ga0075370_100107575 392
148 3300006353 Ga0075370_10012306 Ga0075370_100123063 392
149 3300006948 Ga0099826_10001523 Ga0099826_1000152311 392
150 3300009036 Ga0105244_10001060 Ga0105244_1000106012 392
151 3300009148 Ga0105243_10002199 Ga0105243_1000219912 392
152 3300009148 Ga0105243_10003682 Ga0105243_100036826 392
153 3300009545 Ga0105237_10227407 Ga0105237_102274072 392
154 3300009551 Ga0105238_10088781 Ga0105238_100887812 392
155 3300012502 Ga0157347_1000080 Ga0157347_10000801 392
156 3300013105 Ga0157369_10031345 Ga0157369_100313454 392
157 3300013307 Ga0157372_10099653 Ga0157372_100996534 392
158 3300013308 Ga0157375_10239224 Ga0157375_102392243 392
159 3300014968 Ga0157379_10149923 Ga0157379_101499232 392
160 3300015261 Ga0182006_1013068 Ga0182006_10130682 392
161 3300017792 Ga0163161_10022137 Ga0163161_100221372 392
162 3300025228 Ga0209672_107821 Ga0209672_1078212 392
163 3300025242 Ga0209258_100009 Ga0209258_100009806 392
164 3300025245 Ga0207425_1000424 Ga0207425_100042423 392
165 3300025254 Ga0209148_1000007 Ga0209148_1000007806 392
166 3300025258 Ga0209129_1000024 Ga0209129_1000024264 392
167 3300025258 Ga0209129_1000085 Ga0209129_100008544 392
168 3300025258 Ga0209129_1003396 Ga0209129_10033963 392
169 3300025263 Ga0209565_1000046 Ga0209565_1000046116 392
170 3300025263 Ga0209565_1000460 Ga0209565_100046013 392
171 3300025273 Ga0209673_1000058 Ga0209673_100005822 392
172 3300025273 Ga0209673_1000571 Ga0209673_100057119 392
173 3300025273 Ga0209673_1000585 Ga0209673_100058531 392
174 3300025291 Ga0209675_1000010 Ga0209675_1000010243 392
175 3300025291 Ga0209675_1000387 Ga0209675_100038723 392
176 3300025291 Ga0209675_1002482 Ga0209675_10024827 392
177 3300025292 Ga0209676_1000028 Ga0209676_100002872 392
178 3300025292 Ga0209676_1000098 Ga0209676_1000098211 392
179 3300025292 Ga0209676_1000194 Ga0209676_100019461 392
180 3300025294 Ga0209025_1000122 Ga0209025_100012243 392
181 3300025294 Ga0209025_1000267 Ga0209025_1000267101 392
182 3300025294 Ga0209025_1002511 Ga0209025_100251110 392
183 3300025295 Ga0209564_1000183 Ga0209564_100018374 392
184 3300025295 Ga0209564_1000198 Ga0209564_100019862 392
185 3300025297 Ga0209758_1000049 Ga0209758_1000049183 392
186 3300025298 Ga0209050_1000002 Ga0209050_1000002171 392
187 3300025298 Ga0209050_1000122 Ga0209050_1000122159 392
188 3300025298 Ga0209050_1000554 Ga0209050_100055435 392
189 3300025299 Ga0209256_1000098 Ga0209256_1000098137 392
190 3300025299 Ga0209256_1000140 Ga0209256_100014074 392
191 3300025299 Ga0209256_1020245 Ga0209256_10202451 392
192 3300025302 Ga0207426_1000038 Ga0207426_1000038137 392
193 3300025302 Ga0207426_1000053 Ga0207426_1000053219 392
194 3300025303 Ga0209051_1000194 Ga0209051_100019445 392
195 3300025303 Ga0209051_1000597 Ga0209051_100059729 392
196 3300025304 Ga0209257_1000002 Ga0209257_100000280 392
197 3300025304 Ga0209257_1000475 Ga0209257_100047519 392
198 3300025728 Ga0207655_1002463 Ga0207655_10024634 392
199 3300025933 Ga0207706_10030650 Ga0207706_100306504 392
200 3300025935 Ga0207709_10000702 Ga0207709_1000070223 392
201 3300025935 Ga0207709_10019595 Ga0207709_100195953 392
202 3300026142 Ga0207698_10263509 Ga0207698_102635092 392
203 3300027666 Ga0209282_1000638 Ga0209282_100063810 392
204 3300027866 Ga0209813_10015954 Ga0209813_100159542 392
205 3300028380 Ga0268265_10102932 Ga0268265_101029322 392
206 3300046460 Ga0495638_0024691 Ga0495638_0024691_1547_2812 392
207 3300046475 Ga0495639_0007389 Ga0495639_0007389_2450_3688 392
208 3300046512 Ga0495610_0045932 Ga0495610_0045932_419_1612 392
209 3300046513 Ga0495616_0006779 Ga0495616_0006779_2772_4037 392
210 3300046518 Ga0495631_0000427 Ga0495631_0000427_10240_11433 392
211 3300046520 Ga0495637_0010247 Ga0495637_0010247_456_1649 392
212 3300046530 Ga0495654_0012610 Ga0495654_0012610_2272_3465 392
213 3300046660 Ga0495625_0012103 Ga0495625_0012103_1802_2995 392
214 3300046674 Ga0495588_0010168 Ga0495588_0010168_2344_3582 392
215 3300046674 Ga0495588_0062214 Ga0495588_0062214_197_1390 392
216 3300046683 Ga0495658_0022452 Ga0495658_0022452_1638_2831 392
217 3300047673 Ga0495593_0023610 Ga0495593_0023610_971_2164 392
218 3300048088 Ga0495602_0072590 Ga0495602_0072590_683_1876 392
219 3300048089 Ga0495614_0001785 Ga0495614_0001785_5931_7124 392
220 3300048907 Ga0496104_0031990 Ga0496104_0031990_2411_3649 392
221 3300048908 Ga0496105_0043063 Ga0496105_0043063_1012_2250 392
222 3300048920 Ga0496117_0018279 Ga0496117_0018279_1998_3215 392
223 3300048920 Ga0496117_0038493 Ga0496117_0038493_1044_2237 392
224 3300048921 Ga0496118_0004565 Ga0496118_0004565_10787_11980 392
225 3300048921 Ga0496118_0011867 Ga0496118_0011867_1043_2260 392
226 3300048924 Ga0496121_0041929 Ga0496121_0041929_1733_2926 392
227 3300048928 Ga0496125_0019332 Ga0496125_0019332_4547_5740 392
228 3300048928 Ga0496125_0031933 Ga0496125_0031933_1283_2500 392
229 3300049705 Ga0501225_0001712 Ga0501225_0001712_5108_6301 392
230 3300049759 Ga0501262_001184 Ga0501262_001184_1422_2615 392
231 3300050496 nmdc:mga07m45_1588_c1 nmdc:mga07m45_1588_c1_8498_9730 392
232 3300053079 Ga0500610_0013190 Ga0500610_0013190_1020_2213 392
233 3300053079 Ga0500610_0034364 Ga0500610_0034364_241_1434 392
234 3300053093 Ga0500651_0000167 Ga0500651_0000167_17396_18646 392
235 3300053110 Ga0500571_000040 Ga0500571_000040_18211_19404 392
236 3300053133 Ga0500655_000054 Ga0500655_000054_19523_20773 392
237 3300053134 Ga0500658_0000455 Ga0500658_0000455_9627_10820 392
238 3300053134 Ga0500658_0000549 Ga0500658_0000549_10043_11293 392
239 3300053139 Ga0500568_0001950 Ga0500568_0001950_10058_11251 392
240 3300053141 Ga0500574_001238 Ga0500574_001238_691_1884 392
241 iso_pu_bacteria 2513020051 2513227706 392
242 iso_pu_bacteria 2547132374 2548499921 392
243 iso_pu_bacteria 2599185214 2599625585 392
244 iso_pu_bacteria 2599185226 2599673598 392
245 iso_pu_bacteria 2599185227 2599683268 392
246 iso_pu_bacteria 2599185229 2599695244 392
247 iso_pu_bacteria 2643221658 2644324476 392
248 iso_pu_bacteria 2643221672 2644396317 392
249 iso_pu_bacteria 2643221717 2644644761 392
250 iso_pu_bacteria 2831265667 2831271790 392
251 iso_pu_bacteria 2838054893 2838055638 392
252 iso_pu_bacteria 2842677519 2842680793 392
253 iso_pu_bacteria 2885198086 2885200830 392
254 iso_pu_bacteria 2885211737 2885214387 392
255 iso_pu_bacteria 2899924645 2899927688 392
256 iso_pu_bacteria 2919462493 2919462861 392
257 iso_pu_bacteria 2928037797 2928042034 392
258 iso_pu_bacteria 2928044640 2928049598 392
259 iso_pu_bacteria 2928051484 2928051727 392
260 iso_pu_bacteria 2928064002 2928065580 392
261 iso_pu_bacteria 2928070936 2928073047 392
262 iso_pu_bacteria 2928084124 2928086837 392
263 iso_pu_bacteria 2945945610 2945949346 392
264 iso_pu_bacteria 2954767861 2954771013 392
265 3300002987 JGI25159J45721_1000763 JGI25159J45721_100076311 393
266 3300003354 JGI25160J50197_1000264 JGI25160J50197_100026435 393
267 3300003374 JGI25161J50226_1000198 JGI25161J50226_100019835 393
268 3300003781 Ga0055536_1020457 Ga0055536_10204572 393
269 3300003784 Ga0055534_1001977 Ga0055534_10019773 393
270 3300003791 Ga0055530_10000923 Ga0055530_1000092310 393
271 3300003792 Ga0055540_1000591 Ga0055540_100059110 393
272 3300003794 Ga0055531_10001027 Ga0055531_1000102716 393
273 3300004625 Ga0055543_1000886 Ga0055543_10008863 393
274 3300005262 Ga0065165_1015809 Ga0065165_10158092 393
275 3300005563 Ga0068855_100165652 Ga0068855_1001656523 393
276 3300025245 Ga0207425_1007080 Ga0207425_10070802 393
277 3300025284 Ga0209130_1000181 Ga0209130_100018145 393
278 3300025284 Ga0209130_1000314 Ga0209130_100031428 393
279 3300025284 Ga0209130_1005682 Ga0209130_10056823 393
280 3300025291 Ga0209675_1002401 Ga0209675_10024017 393
281 3300025292 Ga0209676_1000023 Ga0209676_100002328 393
282 3300025292 Ga0209676_1006569 Ga0209676_10065694 393
283 3300025292 Ga0209676_1012274 Ga0209676_10122742 393
284 3300025298 Ga0209050_1000022 Ga0209050_100002210 393
285 3300025298 Ga0209050_1001990 Ga0209050_100199011 393
286 3300025302 Ga0207426_1000117 Ga0207426_100011775 393
287 3300025302 Ga0207426_1005711 Ga0207426_10057113 393
288 3300025303 Ga0209051_1000013 Ga0209051_100001310 393
289 3300025304 Ga0209257_1000042 Ga0209257_1000042476 393
290 3300025304 Ga0209257_1006929 Ga0209257_10069294 393
291 3300025923 Ga0207681_10059496 Ga0207681_100594962 393
292 3300025949 Ga0207667_10138467 Ga0207667_101384673 393
293 3300031548 Ga0307408_100000841 Ga0307408_1000008417 393
294 3300031731 Ga0307405_10077134 Ga0307405_100771342 393
295 3300031824 Ga0307413_10030739 Ga0307413_100307394 393
296 3300042532 Ga0450893_0002538 Ga0450893_0002538_1602_2837 393
297 3300046660 Ga0495625_0000245 Ga0495625_0000245_48800_50152 393
298 3300048925 Ga0496122_0000063 Ga0496122_0000063_55639_56859 393
299 3300048926 Ga0496123_0000045 Ga0496123_0000045_106064_107284 393
300 3300048927 Ga0496124_0080091 Ga0496124_0080091_766_1986 393
301 iso_pu_bacteria 2511231002 2511246547 393
302 iso_pu_bacteria 2643221628 2644162314 393
303 iso_pu_bacteria 2842733646 2842734251 393
304 iso_pu_bacteria 2842747753 2842749494 393
305 iso_pu_bacteria 2904449895 2904450610 393
306 iso_pu_bacteria 2904456579 2904459890 393
307 iso_pu_bacteria 2929520902 2929521327 393
308 iso_pu_bacteria 2945972063 2945973388 393
309 3300005543 Ga0070672_100183818 Ga0070672_1001838182 394
310 3300014497 Ga0182008_10010916 Ga0182008_100109164 394
311 3300015262 Ga0182007_10005682 Ga0182007_100056823 394
312 3300017792 Ga0163161_10054324 Ga0163161_100543242 394
313 3300031456 Ga0307513_10026529 Ga0307513_100265296 394
314 3300031548 Ga0307408_100044427 Ga0307408_1000444272 394
315 3300031731 Ga0307405_10036208 Ga0307405_100362082 394
316 3300031911 Ga0307412_10120985 Ga0307412_101209852 394
317 3300041404 Ga0439436_0004004 Ga0439436_0004004_1897_3207 394
318 3300041406 Ga0439439_0000693 Ga0439439_0000693_4315_5625 394
319 3300041999 Ga0439433_0004727 Ga0439433_0004727_693_2003 394
320 3300042002 Ga0439442_017029 Ga0439442_017029_21_1223 394
321 3300042007 Ga0439449_0006190 Ga0439449_0006190_2814_4124 394
322 3300042010 Ga0439452_004145 Ga0439452_004145_1554_2864 394
323 3300042014 Ga0439457_004637 Ga0439457_004637_1606_2916 394
324 3300042156 Ga0439446_0001530 Ga0439446_0001530_1908_3218 394
325 3300042184 Ga0450908_007007 Ga0450908_007007_82_1392 394
326 3300042435 Ga0439434_0013353 Ga0439434_0013353_382_1692 394
327 3300048914 Ga0496111_0085205 Ga0496111_0085205_869_2188 394
328 3300015683 Ga0183362_10001 Ga0183362_100013 395
329 3300031456 Ga0307513_10000008 Ga0307513_10000008329 395
330 3300046522 Ga0495643_0034482 Ga0495643_0034482_743_2053 395
331 iso_pu_bacteria 2885192300 2885195781 395
332 iso_pu_bacteria 2939631187 2939632163 395
333 3300002704 JGI25155J39150_1000240 JGI25155J39150_100024012 396
334 3300002705 JGI25156J39149_1000031 JGI25156J39149_1000031109 396
335 3300002738 JGI25154J39366_1000049 JGI25154J39366_10000494 396
336 3300002741 JGI25157J39369_1000041 JGI25157J39369_10000414 396
337 3300003771 Ga0055526_1002328 Ga0055526_10023286 396
338 3300003771 Ga0055526_1004788 Ga0055526_10047883 396
339 3300003773 Ga0055537_1000465 Ga0055537_10004656 396
340 3300003773 Ga0055537_1003666 Ga0055537_10036662 396
341 3300003775 Ga0055524_1000114 Ga0055524_100011463 396
342 3300003784 Ga0055534_1002166 Ga0055534_10021666 396
343 3300003790 Ga0055528_1000135 Ga0055528_100013525 396
344 3300025206 Ga0209435_100014 Ga0209435_1000144 396
345 3300025245 Ga0207425_1005697 Ga0207425_10056972 396
346 3300025246 Ga0209646_1000001 Ga0209646_10000014 396
347 3300025250 Ga0209026_1000073 Ga0209026_10000734 396
348 3300025256 Ga0209759_1000013 Ga0209759_10000134 396
349 3300025263 Ga0209565_1000043 Ga0209565_1000043168 396
350 3300025263 Ga0209565_1002799 Ga0209565_10027994 396
351 3300025273 Ga0209673_1000008 Ga0209673_1000008395 396
352 3300025291 Ga0209675_1000136 Ga0209675_100013648 396
353 3300025294 Ga0209025_1004276 Ga0209025_10042768 396
354 3300025294 Ga0209025_1007022 Ga0209025_10070224 396
355 3300025295 Ga0209564_1000279 Ga0209564_100027934 396
356 3300025295 Ga0209564_1000443 Ga0209564_100044315 396
357 3300025299 Ga0209256_1000001 Ga0209256_10000011506 396
358 3300028794 Ga0307515_10006414 Ga0307515_100064143 396
359 3300031456 Ga0307513_10000020 Ga0307513_1000002076 396
360 3300031456 Ga0307513_10216507 Ga0307513_102165072 396
361 3300031548 Ga0307408_100001631 Ga0307408_1000016318 396
362 3300031901 Ga0307406_10016047 Ga0307406_100160471 396
363 3300041512 Ga0451853_1911928 Ga0451853_1911928_82_1284 396
364 3300053730 Ga0500645_000090 Ga0500645_000090_49088_50290 396
365 3300053730 Ga0500645_006891 Ga0500645_006891_2514_3761 396
366 iso_pu_bacteria 2643221570 2643868154 396
367 iso_pu_bacteria 2643221652 2644293761 396
368 iso_pu_bacteria 2990710928 2990713487 396

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00817

IMS

impB/mucB/samB family

8

186

0.97

PF11799

IMS_C

impB/mucB/samB family C-terminal domain

267

378

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6hix-assembly1.cif.gz_BS cryo-em structure of the trypanosoma brucei mitochondrial ribosome - this entry contains the large mitoribosomal subunit 0.8184 197 250
2bke-assembly1.cif.gz_A conformational flexibility revealed by the crystal structure of a crenarchaeal rada 0.8092 199 250
6yxx-assembly1.cif.gz_BS state a of the trypanosoma brucei mitoribosomal large subunit assembly intermediate 0.7749 197 250
6jum-assembly2.cif.gz_F msdpo4-dna complex 2 0.7733 1 367
6jun-assembly2.cif.gz_A msdpo4-dna complex 3 0.7731 1 367
ID Description Score Start End Superfamily
3gqcC03 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9758 199 250 1.10.150.20
af_Q9UBZ9_643_696_1.10.150.20 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.9721 199 250 1.10.150.20
3gqcD03 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1;5' to 3' exonuclease, C-terminal subdomain 0.97 199 250 1.10.150.20
af_Q4D5H8_135_177_3.40.1170.60 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.959 62 89 3.40.1170.60
3mfhA02 Alpha Beta;3-Layer(aba) Sandwich;MutS, DNA mismatch repair protein, domain I; 0.9493 62 96 3.40.1170.60
ID Description Score Start End GO Terms
AF-A0A1J5PCW8-F1-model_v4 DNA polymerase IV (EC 2.7.7.7) 0.9448 302 372 GO:0003684
GO:0003887
GO:0006281
AF-A0A661ID49-F1-model_v4 DNA polymerase IV 0.9337 285 369 GO:0003684
GO:0006281
AF-A0A0G3G8V0-F1-model_v4 DNA polymerase Y-family little finger domain-containing protein 0.9295 305 369 GO:0003684
GO:0006281
AF-A0A850GDH8-F1-model_v4 DNA polymerase Y-family little finger domain-containing protein 0.9205 291 371 GO:0003684
GO:0003887
GO:0005829
GO:0009432
GO:0042276
AF-A0A7C9DNX1-F1-model_v4 DNA-directed DNA polymerase (EC 2.7.7.7) 0.9111 103 273 GO:0003887
GO:0005634
GO:0017125
GO:0042276
GO:0070987

Feature Viewer

pLDDT pTM Quality
83.14 0.67 Medium
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Predicted Structure (AlphaFold2)

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