F423459

General Info

Members Datasets Scaffolds Average Seq Length
364 224 333 484

Family's Representative Sequence

Representative Sequence 3300048928|Ga0496125_0024834|Ga0496125_0024834_2386_3963
Length 525
Sequence MYQSGPTRASFDQAIGETSVRFQVWVFQMTKTVLVVDDDPTQRRLIQAVLEREGFAVAHAENGDAAITRLQSGASTDIVLLDLVMPGMSGQDTLKEMRARNFAQPVIVLTATGGIDTVVQAMQAGASDFFIKPASPERIIVSIRNALSMGALKGEVDRLKKHATGRTSFADMVGNSPAMTMVKRMGERAAKSSIPILITGESGVGKEVIARAVHGSSERAGKPFVAVNCGALPENLVESILFGHEKGSFTGATDKHLGKFQEANGGTLFLDEVGELPLDMQVKLLRALQESEIDPVGSKRSVKVDVRIVSATNRDPAQAVKEGLFREDLFYRLNVFPIEAPPLRDRREDIPALVDHFIRRFNVEEGKTVVGASAETLAFLTSHDWPGNVRQLENAVYRAIVLADAPYLQAYDFPAISGVAAPPPEALEPVASQRPISLPTAEELVAEMPADAPVRILDHRGHLRTLEEIERDLIALAIEIYAGHMSEVARRLGIGRSTLYRKVREQGLEDAVKGAGGEEDASAVA

Samples

Sample ID Description Type Environment
1 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
2 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
3 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
4 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
5 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
6 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
7 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
8 2643221574 Brevundimonas sp. Root608 Isolate Unclassified
9 2643221583 Caulobacter sp. Root655 Isolate Unclassified
10 2643221584 Caulobacter sp. Root656 Isolate Unclassified
11 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
12 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
13 2643221640 Caulobacter sp. Root342 Isolate Unclassified
14 2643221642 Caulobacter sp. Root343 Isolate Unclassified
15 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
16 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
17 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
18 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
19 2739367756 Asticcacaulis sp. CF398 Isolate Unclassified
20 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
21 2818991435 Caulobacter henricii 536 Isolate Unclassified
22 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
23 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
24 2849560528 Caulobacter zeae 410 Isolate Unclassified
25 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
26 2851153111 Caulobacter radicis 736 Isolate Unclassified
27 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
28 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
29 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
30 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
31 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
32 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
33 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
34 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
35 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
36 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
37 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
38 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
39 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
40 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
41 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
42 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
48 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
49 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
52 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
53 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
54 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
58 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
59 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
60 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
61 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
62 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
67 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
68 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
69 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
72 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
74 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
76 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
77 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
104 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
105 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
106 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
107 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
108 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
109 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
110 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
111 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
112 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
113 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
114 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
115 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
116 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
123 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
124 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
125 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
126 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
127 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
130 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
131 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
132 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
133 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
134 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
135 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
136 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
137 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
138 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
139 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
140 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
141 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
142 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
143 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
144 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
145 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
146 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
147 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
148 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
149 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
152 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
153 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
154 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
155 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
156 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
157 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
158 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
159 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
162 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
163 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
164 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
165 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
166 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
167 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
168 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
169 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
170 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
171 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
172 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
173 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
174 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
181 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
182 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
183 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
184 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
185 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
186 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
187 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
188 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
190 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
191 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
192 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
193 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
194 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
195 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
196 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
197 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
198 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
199 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
200 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
201 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
202 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
203 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
204 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
205 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
206 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
207 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
208 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
209 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
210 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
211 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
212 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
213 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
214 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
215 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
216 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
217 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
218 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
219 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
220 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
221 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
222 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
223 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
224 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.48
Metatranscriptomes 0
Isolates 8.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 20.6
Nodule 0.27
Rhizoplane 4.12
Rhizosphere 64.01
Stem 0
Stem Tuber 0
Unclassified 10.99

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0055530_10000090 3300003791 Bacteria 78168
2 Ga0055531_10003134 3300003794 Bacteria 10658
3 Ga0055531_10006027 3300003794 Bacteria 6955
4 Ga0065165_1000171 3300005262 Bacteria 114917
5 Ga0065165_1006919 3300005262 Bacteria 5754
6 Ga0070670_100030354 3300005331 Bacteria 4655
7 Ga0070680_100074768 3300005336 Bacteria 2788
8 Ga0070668_100001146 3300005347 Bacteria 18666
9 Ga0070668_100006480 3300005347 Bacteria 8681
10 Ga0070668_100009688 3300005347 Bacteria 7143
11 Ga0070668_100012142 3300005347 Bacteria 6415
12 Ga0070668_100017970 3300005347 Bacteria 5304
13 Ga0070669_100013575 3300005353 Bacteria 5791
14 Ga0070671_100002841 3300005355 Bacteria 13453
15 Ga0070667_100001821 3300005367 Bacteria 19005
16 Ga0070667_100004470 3300005367 Bacteria 11796
17 Ga0070662_100077163 3300005457 Bacteria 2472
18 Ga0070681_10050123 3300005458 Bacteria 4166
19 Ga0070665_100000221 3300005548 Bacteria 95402
20 Ga0070665_100004010 3300005548 Bacteria 15526
21 Ga0068855_100049823 3300005563 Bacteria 4938
22 Ga0068855_100095487 3300005563 Bacteria 3426
23 Ga0068859_100000168 3300005617 Bacteria 63325
24 Ga0068864_100000095 3300005618 Bacteria 91554
25 Ga0068864_100005107 3300005618 Bacteria 10756
26 Ga0068864_100028239 3300005618 Bacteria 4740
27 Ga0068861_100013427 3300005719 Bacteria 5733
28 Ga0068863_100000045 3300005841 Bacteria 147269
29 Ga0068863_100004340 3300005841 Bacteria 13971
30 Ga0068863_100004525 3300005841 Bacteria 13709
31 Ga0068863_100017299 3300005841 Bacteria 6915
32 Ga0068858_100000144 3300005842 Bacteria 75375
33 Ga0068858_100005728 3300005842 Bacteria 12142
34 Ga0068858_100043624 3300005842 Bacteria 4159
35 Ga0068860_100000037 3300005843 Bacteria 234524
36 Ga0068860_100000204 3300005843 Bacteria 93995
37 Ga0068860_100010481 3300005843 Bacteria 9162
38 Ga0068860_100118836 3300005843 Bacteria 2530
39 Ga0068862_100026039 3300005844 Bacteria 4916
40 Ga0075368_10002719 3300006042 Bacteria 5832
41 Ga0075362_10040427 3300006177 Bacteria 2053
42 Ga0075367_10026638 3300006178 Bacteria 3281
43 Ga0068865_100000625 3300006881 Bacteria 19900
44 Ga0097620_100000168 3300006931 Bacteria 63325
45 Ga0079104_1018803 3300006946 Bacteria 1948
46 Ga0105240_10003057 3300009093 Bacteria 26302
47 Ga0105240_10005069 3300009093 Bacteria 19747
48 Ga0105240_10148740 3300009093 Bacteria 2791
49 Ga0105248_10000097 3300009177 Bacteria 97424
50 Ga0105248_10004878 3300009177 Bacteria 14832
51 Ga0105248_10016234 3300009177 Bacteria 8196
52 Ga0105238_10012001 3300009551 Bacteria 8727
53 Ga0105249_10008289 3300009553 Bacteria 9051
54 Ga0105249_10125029 3300009553 Bacteria 2448
55 Ga0157373_10001054 3300013100 Bacteria 21230
56 Ga0157373_10001886 3300013100 Bacteria 15903
57 Ga0163162_10006234 3300013306 Bacteria 11560
58 Ga0163162_10104620 3300013306 Bacteria 2925
59 Ga0163162_10161762 3300013306 Bacteria 2360
60 Ga0163163_10072949 3300014325 Bacteria 3423
61 Ga0157379_10001371 3300014968 Bacteria 19938
62 Ga0157379_10009143 3300014968 Bacteria 8629
63 Ga0157379_10127375 3300014968 Bacteria 2291
64 Ga0183365_10001 3300015684 Bacteria 2090444
65 Ga0213872_10006230 3300021361 Bacteria 6025
66 Ga0213876_10000391 3300021384 Bacteria 36827
67 Ga0209673_1000788 3300025273 Bacteria 42315
68 Ga0209675_1006036 3300025291 Bacteria 4950
69 Ga0209676_1000163 3300025292 Bacteria 157845
70 Ga0209676_1000188 3300025292 Bacteria 141232
71 Ga0209564_1001719 3300025295 Bacteria 20581
72 Ga0209758_1004950 3300025297 Bacteria 10676
73 Ga0209758_1009117 3300025297 Bacteria 6254
74 Ga0209050_1000095 3300025298 Bacteria 242722
75 Ga0209050_1000589 3300025298 Bacteria 57942
76 Ga0209050_1002823 3300025298 Bacteria 13857
77 Ga0209051_1001987 3300025303 Bacteria 15679
78 Ga0209257_1000106 3300025304 Bacteria 242634
79 Ga0209257_1000224 3300025304 Bacteria 134156
80 Ga0209257_1000592 3300025304 Bacteria 60466
81 Ga0209257_1001816 3300025304 Bacteria 23363
82 Ga0207680_10008982 3300025903 Bacteria 4933
83 Ga0207705_10001493 3300025909 Bacteria 18593
84 Ga0207695_10001415 3300025913 Bacteria 40402
85 Ga0207695_10017499 3300025913 Bacteria 8338
86 Ga0207695_10021182 3300025913 Bacteria 7424
87 Ga0207695_10041158 3300025913 Bacteria 4946
88 Ga0207657_10003180 3300025919 Bacteria 17567
89 Ga0207652_10021668 3300025921 Bacteria 5304
90 Ga0207681_10012126 3300025923 Bacteria 5312
91 Ga0207694_10007455 3300025924 Bacteria 8292
92 Ga0207650_10000030 3300025925 Bacteria 235824
93 Ga0207687_10074139 3300025927 Bacteria 2438
94 Ga0207644_10009687 3300025931 Bacteria 6333
95 Ga0207644_10037844 3300025931 Bacteria 3396
96 Ga0207690_10000077 3300025932 Bacteria 85018
97 Ga0207706_10115942 3300025933 Bacteria 2356
98 Ga0207711_10001523 3300025941 Bacteria 21545
99 Ga0207711_10002325 3300025941 Bacteria 17032
100 Ga0207711_10019610 3300025941 Bacteria 5629
101 Ga0207711_10072212 3300025941 Bacteria 2997
102 Ga0207711_10085033 3300025941 Bacteria 2771
103 Ga0207679_10041319 3300025945 Bacteria 3306
104 Ga0207667_10006714 3300025949 Bacteria 13901
105 Ga0207667_10118137 3300025949 Bacteria 2733
106 Ga0207668_10000010 3300025972 Bacteria 185249
107 Ga0207668_10000152 3300025972 Bacteria 47686
108 Ga0207668_10003988 3300025972 Bacteria 8697
109 Ga0207668_10007353 3300025972 Bacteria 6546
110 Ga0207658_10000935 3300025986 Bacteria 24111
111 Ga0207658_10001721 3300025986 Bacteria 16535
112 Ga0207658_10013550 3300025986 Bacteria 5574
113 Ga0207703_10000557 3300026035 Bacteria 38274
114 Ga0207703_10023419 3300026035 Bacteria 4850
115 Ga0207639_10010440 3300026041 Bacteria 6433
116 Ga0207639_10102972 3300026041 Bacteria 2312
117 Ga0207641_10000011 3300026088 Bacteria 384362
118 Ga0207641_10014242 3300026088 Bacteria 6515
119 Ga0207641_10025200 3300026088 Bacteria 4904
120 Ga0207641_10032081 3300026088 Bacteria 4361
121 Ga0207641_10104675 3300026088 Bacteria 2499
122 Ga0207676_10000095 3300026095 Bacteria 80405
123 Ga0207676_10000114 3300026095 Bacteria 71881
124 Ga0207676_10129600 3300026095 Bacteria 2142
125 Ga0207675_100009581 3300026118 Bacteria 9060
126 Ga0209999_1000345 3300027543 Bacteria 7012
127 Ga0268266_10000005 3300028379 Bacteria 1448194
128 Ga0268266_10001030 3300028379 Bacteria 35113
129 Ga0268265_10023191 3300028380 Bacteria 4372
130 Ga0268264_10000002 3300028381 Bacteria 1153045
131 Ga0268264_10000125 3300028381 Bacteria 186416
132 Ga0268264_10031250 3300028381 Bacteria 4366
133 Ga0265337_1012378 3300028556 Bacteria 2902
134 Ga0307517_10004171 3300028786 Bacteria 22289
135 Ga0307517_10017856 3300028786 Bacteria 9212
136 Ga0307515_10101194 3300028794 Bacteria 3481
137 Ga0265338_10014163 3300028800 Bacteria 8911
138 Ga0265338_10085659 3300028800 Bacteria 2626
139 Ga0265338_10097911 3300028800 Bacteria 2401
140 Ga0265327_10000728 3300031251 Bacteria 51342
141 Ga0265327_10004440 3300031251 Bacteria 12420
142 Ga0265327_10009150 3300031251 Bacteria 7201
143 Ga0307513_10000203 3300031456 Bacteria 85712
144 Ga0307513_10006613 3300031456 Bacteria 15133
145 Ga0307513_10017143 3300031456 Bacteria 8698
146 Ga0307513_10089307 3300031456 Bacteria 3146
147 Ga0307408_100086233 3300031548 Bacteria 2360
148 Ga0265314_10018361 3300031711 Bacteria 5453
149 Ga0307516_10000001 3300031730 Bacteria 510338
150 Ga0307510_10001043 3300033180 Bacteria 29378
151 Ga0373936_0019309 3300035113 Bacteria 2641
152 Ga0373943_0014062 3300035170 Bacteria 3619
153 Ga0373931_0055072 3300035691 Bacteria 2127
154 Ga0373927_0002828 3300035695 Bacteria 12661
155 Ga0373925_0000089 3300037068 Bacteria 98449
156 Ga0373925_0082397 3300037068 Bacteria 2448
157 Ga0395899_0000018 3300037312 Bacteria 423194
158 Ga0395899_0017889 3300037312 Bacteria 5394
159 Ga0395900_0000008 3300037418 Bacteria 480459
160 Ga0395900_0014019 3300037418 Bacteria 8185
161 Ga0395898_0017875 3300037466 Bacteria 7233
162 Ga0395905_0000123 3300037471 Bacteria 127888
163 Ga0395905_0020996 3300037471 Bacteria 6183
164 Ga0395905_0029851 3300037471 Bacteria 5139
165 Ga0395905_0144283 3300037471 Bacteria 2240
166 Ga0436364_0963235 3300037853 Bacteria 2850
167 Ga0436364_1543931 3300037853 Bacteria 2561
168 Ga0395901_0000008 3300038443 Bacteria 495962
169 Ga0395901_0086758 3300038443 Bacteria 3272
170 Ga0436365_0439594 3300039437 Bacteria 58263
171 Ga0436365_1926423 3300039437 Bacteria 6470
172 Ga0436361_0762048 3300039447 Bacteria 6422
173 Ga0436363_1335568 3300039450 Bacteria 4649
174 Ga0439446_0023983 3300042156 Bacteria 1738
175 Ga0466966_0000110 3300044684 Bacteria 50891
176 Ga0466961_0000716 3300044693 Bacteria 20891
177 Ga0466959_0000052 3300045049 Bacteria 81493
178 Ga0495627_000950 3300046453 Bacteria 19919
179 Ga0495590_0001482 3300046457 Bacteria 10117
180 Ga0495629_0027789 3300046459 Bacteria 4018
181 Ga0495638_0001716 3300046460 Bacteria 19267
182 Ga0495638_0009202 3300046460 Bacteria 6945
183 Ga0495638_0023073 3300046460 Bacteria 4076
184 Ga0495638_0057982 3300046460 Bacteria 2400
185 Ga0495650_0000068 3300046471 Bacteria 266671
186 Ga0495583_0000002 3300046506 Bacteria 782521
187 Ga0495610_0000111 3300046512 Bacteria 95122
188 Ga0495610_0009240 3300046512 Bacteria 6252
189 Ga0495610_0009378 3300046512 Bacteria 6194
190 Ga0495616_0000790 3300046513 Bacteria 23159
191 Ga0495616_0028560 3300046513 Bacteria 2953
192 Ga0495631_0004159 3300046518 Bacteria 7756
193 Ga0495632_0001020 3300046519 Bacteria 24210
194 Ga0495637_0004945 3300046520 Bacteria 6863
195 Ga0495637_0015519 3300046520 Bacteria 3573
196 Ga0495643_0038573 3300046522 Bacteria 2615
197 Ga0495648_0000940 3300046524 Bacteria 30217
198 Ga0495642_0004863 3300046528 Bacteria 5192
199 Ga0495642_0030317 3300046528 Bacteria 2163
200 Ga0495654_0000051 3300046530 Bacteria 145932
201 Ga0495609_0013061 3300046538 Bacteria 3929
202 Ga0495597_0001663 3300046542 Bacteria 15479
203 Ga0495622_0001430 3300046557 Bacteria 12068
204 Ga0495668_0000100 3300046616 Bacteria 137684
205 Ga0495668_0042442 3300046616 Bacteria 2532
206 Ga0495625_0000198 3300046660 Bacteria 95530
207 Ga0495625_0002104 3300046660 Bacteria 22238
208 Ga0495625_0033762 3300046660 Bacteria 3779
209 Ga0495659_0034881 3300046664 Bacteria 1771
210 Ga0495669_0000009 3300046684 Bacteria 165516
211 Ga0495669_0000358 3300046684 Bacteria 23319
212 Ga0495669_0018706 3300046684 Bacteria 2981
213 Ga0495613_0001008 3300046689 Bacteria 21439
214 Ga0495589_0031797 3300046794 Bacteria 2656
215 Ga0495672_0000570 3300047320 Bacteria 41708
216 Ga0495672_0008270 3300047320 Bacteria 7707
217 Ga0495672_0026786 3300047320 Bacteria 3673
218 Ga0495672_0032629 3300047320 Bacteria 3237
219 Ga0495683_0044922 3300047323 Bacteria 2221
220 Ga0495679_018801 3300047446 Bacteria 2443
221 Ga0495673_0000273 3300047469 Bacteria 70294
222 Ga0495673_0000381 3300047469 Bacteria 52869
223 Ga0495686_0000305 3300047472 Bacteria 83657
224 Ga0495686_0000932 3300047472 Bacteria 36370
225 Ga0496102_0067731 3300048905 Bacteria 3275
226 Ga0496102_0091018 3300048905 Bacteria 2823
227 Ga0496103_0036908 3300048906 Bacteria 2994
228 Ga0496106_0006357 3300048909 Bacteria 8748
229 Ga0496106_0138066 3300048909 Bacteria 1916
230 Ga0496107_0000474 3300048910 Bacteria 22073
231 Ga0496107_0180885 3300048910 Bacteria 1565
232 Ga0496108_0107758 3300048911 Bacteria 2379
233 Ga0496110_0040915 3300048913 Bacteria 4042
234 Ga0496112_0031571 3300048915 Bacteria 5140
235 Ga0496112_0172987 3300048915 Bacteria 2125
236 Ga0496113_0091070 3300048916 Bacteria 2350
237 Ga0496115_0001601 3300048918 Bacteria 16271
238 Ga0496115_0004311 3300048918 Bacteria 10295
239 Ga0496115_0088837 3300048918 Bacteria 2523
240 Ga0496121_0000442 3300048924 Bacteria 81890
241 Ga0496121_0001901 3300048924 Bacteria 33429
242 Ga0496125_0024834 3300048928 Bacteria 5500
243 Ga0496126_0004137 3300048929 Bacteria 17545
244 Ga0495678_007835 3300049459 Bacteria 5489
245 Ga0495682_0012080 3300049460 Bacteria 3319
246 Ga0501033_0005322 3300049570 Bacteria 10196
247 Ga0501033_0016730 3300049570 Bacteria 5547
248 Ga0501034_0029690 3300049571 Bacteria 5558
249 Ga0501034_0095828 3300049571 Bacteria 2964
250 Ga0501036_0146847 3300049572 Bacteria 1989
251 Ga0501037_0015352 3300049573 Bacteria 5635
252 Ga0501043_0007808 3300049579 Bacteria 8457
253 Ga0501047_0004398 3300049581 Bacteria 13262
254 Ga0501047_0004519 3300049581 Bacteria 13080
255 Ga0501047_0030043 3300049581 Bacteria 5239
256 Ga0501047_0135549 3300049581 Bacteria 2342
257 Ga0501067_0001111 3300049583 Bacteria 14540
258 Ga0501067_0032868 3300049583 Bacteria 2879
259 Ga0501067_0056794 3300049583 Bacteria 2168
260 Ga0501068_0001818 3300049584 Bacteria 11329
261 Ga0501072_0020880 3300049588 Bacteria 5076
262 Ga0501072_0119405 3300049588 Bacteria 2101
263 Ga0501073_0000068 3300049589 Bacteria 63524
264 Ga0501073_0016224 3300049589 Bacteria 5398
265 Ga0501077_0002761 3300049593 Bacteria 10524
266 Ga0501257_003089 3300049686 Bacteria 3547
267 Ga0501080_0002520 3300049742 Bacteria 16054
268 Ga0501080_0003510 3300049742 Bacteria 13808
269 Ga0501080_0004480 3300049742 Bacteria 12437
270 Ga0501080_0169843 3300049742 Bacteria 2012
271 Ga0501083_0000960 3300049744 Bacteria 19069
272 Ga0501035_0149938 3300049822 Bacteria 2024
273 Ga0501044_0003871 3300049823 Bacteria 16772
274 Ga0501044_0005817 3300049823 Bacteria 13658
275 Ga0501044_0012686 3300049823 Bacteria 9127
276 Ga0501044_0098802 3300049823 Bacteria 2938
277 nmdc:mga06z11_66104_c1 3300050494 Bacteria 1900
278 nmdc:mga07m45_1102_c1 3300050496 Bacteria 12056
279 Ga0500635_0000125 3300053080 Bacteria 45357
280 Ga0500635_0000755 3300053080 Bacteria 8059
281 Ga0500578_0000410 3300053086 Bacteria 52417
282 Ga0500578_0034801 3300053086 Bacteria 3237
283 Ga0500643_000545 3300053087 Bacteria 26277
284 Ga0500643_002197 3300053087 Bacteria 10313
285 Ga0500644_0000154 3300053088 Bacteria 42962
286 Ga0500647_0025748 3300053091 Bacteria 2773
287 Ga0500651_0012179 3300053093 Bacteria 5208
288 Ga0500651_0012561 3300053093 Bacteria 5138
289 Ga0500641_0001077 3300053096 Bacteria 9720
290 Ga0500641_0001188 3300053096 Bacteria 9281
291 Ga0500554_004902 3300053102 Bacteria 2877
292 Ga0500555_001202 3300053103 Bacteria 8435
293 Ga0500555_017826 3300053103 Bacteria 2046
294 Ga0500556_0000650 3300053104 Bacteria 21730
295 Ga0500556_0006203 3300053104 Bacteria 3389
296 Ga0500562_000295 3300053108 Bacteria 12157
297 Ga0500572_000701 3300053111 Bacteria 10862
298 Ga0500594_0001916 3300053118 Bacteria 4503
299 Ga0500595_003191 3300053119 Bacteria 7757
300 Ga0500595_005679 3300053119 Bacteria 5416
301 Ga0500595_008108 3300053119 Bacteria 4310
302 Ga0500608_000027 3300053122 Bacteria 66998
303 Ga0500608_000610 3300053122 Bacteria 13150
304 Ga0500608_000967 3300053122 Bacteria 10300
305 Ga0500608_031607 3300053122 Bacteria 2513
306 Ga0500614_002861 3300053123 Bacteria 3789
307 Ga0500614_006757 3300053123 Bacteria 2413
308 Ga0500618_000153 3300053125 Bacteria 56885
309 Ga0500658_0035494 3300053134 Bacteria 1974
310 Ga0500559_0000001 3300053136 Bacteria 325464
311 Ga0500559_0001786 3300053136 Bacteria 11805
312 Ga0500564_014085 3300053138 Bacteria 3587
313 Ga0500577_0017428 3300053142 Bacteria 2287
314 Ga0500590_018606 3300053148 Bacteria 3595
315 Ga0500622_0004111 3300053156 Bacteria 9319
316 Ga0500622_0006712 3300053156 Bacteria 6632
317 Ga0500622_0007209 3300053156 Bacteria 6336
318 Ga0500622_0012219 3300053156 Bacteria 4657
319 Ga0500627_0032969 3300053158 Bacteria 2186
320 Ga0500636_0020483 3300053177 Bacteria 3918
321 Ga0500636_0035677 3300053177 Bacteria 2942
322 Ga0500637_0026928 3300053178 Bacteria 3170
323 Ga0500576_051018 3300053725 Bacteria 1835
324 Ga0500625_001140 3300053729 Bacteria 8693
325 Ga0500645_000604 3300053730 Bacteria 23015
326 Ga0500645_003419 3300053730 Bacteria 6448
327 Ga0500645_005743 3300053730 Bacteria 4516
328 Ga0500596_000607 3300053735 Bacteria 6882
329 Ga0501084_0039855 3300054114 Bacteria 3928
330 Ga0501082_0000974 3300060353 Bacteria 25286
331 Ga0501082_0008723 3300060353 Bacteria 8741
332 Ga0501082_0011502 3300060353 Bacteria 7618
333 Ga0466962_0000027 3300061719 Bacteria 71620

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300047446 Ga0495679_018801 Ga0495679_018801_14_1279 396
2 3300037471 Ga0395905_0144283 Ga0395905_0144283_13_1305 406
3 3300053103 Ga0500555_001202 Ga0500555_001202_35_1324 409
4 3300037068 Ga0373925_0082397 Ga0373925_0082397_1100_2428 415
5 3300037471 Ga0395905_0029851 Ga0395905_0029851_2530_3987 440
6 3300037471 Ga0395905_0000123 Ga0395905_0000123_13835_15295 443
7 3300047469 Ga0495673_0000273 Ga0495673_0000273_23860_25332 445
8 3300049581 Ga0501047_0135549 Ga0501047_0135549_12_1403 445
9 3300047472 Ga0495686_0000305 Ga0495686_0000305_34196_35638 449
10 3300028380 Ga0268265_10023191 Ga0268265_100231912 450
11 3300049571 Ga0501034_0029690 Ga0501034_0029690_2405_3850 450
12 3300049571 Ga0501034_0095828 Ga0501034_0095828_681_2126 450
13 3300049588 Ga0501072_0119405 Ga0501072_0119405_622_2067 450
14 3300047320 Ga0495672_0032629 Ga0495672_0032629_1040_2485 451
15 3300049572 Ga0501036_0146847 Ga0501036_0146847_114_1565 451
16 3300049579 Ga0501043_0007808 Ga0501043_0007808_4990_6432 451
17 3300049581 Ga0501047_0004398 Ga0501047_0004398_8580_10022 451
18 3300049583 Ga0501067_0001111 Ga0501067_0001111_6342_7793 451
19 3300049583 Ga0501067_0056794 Ga0501067_0056794_304_1746 451
20 3300049584 Ga0501068_0001818 Ga0501068_0001818_3919_5370 451
21 3300049589 Ga0501073_0000068 Ga0501073_0000068_28696_30147 451
22 3300049589 Ga0501073_0016224 Ga0501073_0016224_1078_2520 451
23 3300049593 Ga0501077_0002761 Ga0501077_0002761_3618_5069 451
24 3300049742 Ga0501080_0003510 Ga0501080_0003510_6106_7557 451
25 3300049742 Ga0501080_0004480 Ga0501080_0004480_10016_11458 451
26 3300049823 Ga0501044_0003871 Ga0501044_0003871_6122_7573 451
27 3300049823 Ga0501044_0098802 Ga0501044_0098802_589_2031 451
28 3300053080 Ga0500635_0000755 Ga0500635_0000755_2552_4018 451
29 3300053119 Ga0500595_005679 Ga0500595_005679_43_1485 452
30 3300015684 Ga0183365_10001 Ga0183365_100011904 453
31 3300042156 Ga0439446_0023983 Ga0439446_0023983_162_1640 453
32 3300049583 Ga0501067_0032868 Ga0501067_0032868_1259_2716 453
33 3300049588 Ga0501072_0020880 Ga0501072_0020880_3038_4495 453
34 3300053122 Ga0500608_000967 Ga0500608_000967_2191_3657 453
35 3300054114 Ga0501084_0039855 Ga0501084_0039855_2153_3610 453
36 3300060353 Ga0501082_0011502 Ga0501082_0011502_5141_6598 453
37 3300046660 Ga0495625_0002104 Ga0495625_0002104_9446_10918 454
38 3300046794 Ga0495589_0031797 Ga0495589_0031797_289_1761 454
39 3300046460 Ga0495638_0009202 Ga0495638_0009202_3368_4843 455
40 3300005843 Ga0068860_100010481 Ga0068860_1000104811 456
41 3300021384 Ga0213876_10000391 Ga0213876_1000039128 457
42 3300037853 Ga0436364_1543931 Ga0436364_1543931_1065_2540 457
43 3300039437 Ga0436365_0439594 Ga0436365_0439594_10646_12121 457
44 3300039450 Ga0436363_1335568 Ga0436363_1335568_944_2419 457
45 iso_pu_bacteria 2739367756 2739792271 457
46 3300031456 Ga0307513_10017143 Ga0307513_100171437 458
47 3300035691 Ga0373931_0055072 Ga0373931_0055072_379_1890 458
48 3300037471 Ga0395905_0020996 Ga0395905_0020996_760_2238 458
49 3300047320 Ga0495672_0000570 Ga0495672_0000570_12622_14121 458
50 3300049581 Ga0501047_0004519 Ga0501047_0004519_7314_8816 458
51 3300049742 Ga0501080_0002520 Ga0501080_0002520_10865_12358 458
52 3300049744 Ga0501083_0000960 Ga0501083_0000960_15981_17474 458
53 3300060353 Ga0501082_0008723 Ga0501082_0008723_757_2250 458
54 iso_pu_bacteria 2582581279 2585149061 458
55 3300013306 Ga0163162_10161762 Ga0163162_101617621 459
56 3300031251 Ga0265327_10004440 Ga0265327_100044401 459
57 3300031711 Ga0265314_10018361 Ga0265314_100183612 459
58 3300046689 Ga0495613_0001008 Ga0495613_0001008_5595_7031 459
59 3300048909 Ga0496106_0138066 Ga0496106_0138066_387_1823 459
60 3300048910 Ga0496107_0180885 Ga0496107_0180885_98_1534 459
61 3300053091 Ga0500647_0025748 Ga0500647_0025748_675_2114 459
62 3300053111 Ga0500572_000701 Ga0500572_000701_6312_7751 459
63 3300053136 Ga0500559_0000001 Ga0500559_0000001_268897_270336 459
64 3300053177 Ga0500636_0020483 Ga0500636_0020483_1067_2506 459
65 3300060353 Ga0501082_0000974 Ga0501082_0000974_18727_20211 459
66 iso_pu_bacteria 2585428106 2587915431 459
67 iso_pu_bacteria 2643221574 2643884795 459
68 iso_pu_bacteria 2643221640 2644223988 459
69 iso_pu_bacteria 2643221642 2644232974 459
70 iso_pu_bacteria 2643221699 2644550755 459
71 iso_pu_bacteria 2857504554 2857507966 459
72 iso_pu_bacteria 2884960567 2884965817 459
73 iso_pu_bacteria 2928531327 2928534878 459
74 iso_pu_bacteria 2510917020 2511121003 460
75 iso_pu_bacteria 2643221545 2643748484 460
76 iso_pu_bacteria 2643221583 2643923794 460
77 iso_pu_bacteria 2643221691 2644510158 460
78 iso_pu_bacteria 2791355048 2792461643 460
79 iso_pu_bacteria 2843744320 2843746102 460
80 iso_pu_bacteria 2849560528 2849561646 460
81 iso_pu_bacteria 2849573788 2849574469 460
82 iso_pu_bacteria 2851153111 2851153428 460
83 iso_pu_bacteria 2898329390 2898330808 460
84 3300005347 Ga0070668_100012142 Ga0070668_1000121428 461
85 3300005367 Ga0070667_100001821 Ga0070667_10000182111 461
86 3300005548 Ga0070665_100004010 Ga0070665_1000040104 461
87 3300013100 Ga0157373_10001054 Ga0157373_100010548 461
88 3300013100 Ga0157373_10001886 Ga0157373_1000188611 461
89 3300025972 Ga0207668_10000010 Ga0207668_10000010115 461
90 3300025986 Ga0207658_10001721 Ga0207658_1000172112 461
91 3300028379 Ga0268266_10001030 Ga0268266_1000103033 461
92 3300031251 Ga0265327_10000728 Ga0265327_1000072824 461
93 3300044684 Ga0466966_0000110 Ga0466966_0000110_35222_36691 461
94 3300044693 Ga0466961_0000716 Ga0466961_0000716_13934_15403 461
95 3300045049 Ga0466959_0000052 Ga0466959_0000052_63728_65197 461
96 3300053096 Ga0500641_0001077 Ga0500641_0001077_6202_7662 461
97 3300053156 Ga0500622_0012219 Ga0500622_0012219_2109_3578 461
98 3300061719 Ga0466962_0000027 Ga0466962_0000027_50621_52090 461
99 iso_pu_bacteria 2941485952 2941488886 461
100 3300005347 Ga0070668_100009688 Ga0070668_1000096883 462
101 3300009093 Ga0105240_10005069 Ga0105240_100050699 462
102 3300021361 Ga0213872_10006230 Ga0213872_100062302 462
103 3300025292 Ga0209676_1000163 Ga0209676_100016343 462
104 3300025298 Ga0209050_1000589 Ga0209050_100058944 462
105 3300025303 Ga0209051_1001987 Ga0209051_100198715 462
106 3300025945 Ga0207679_10041319 Ga0207679_100413192 462
107 3300025972 Ga0207668_10007353 Ga0207668_100073534 462
108 3300026041 Ga0207639_10010440 Ga0207639_100104402 462
109 3300026088 Ga0207641_10104675 Ga0207641_101046752 462
110 3300028556 Ga0265337_1012378 Ga0265337_10123782 462
111 3300028800 Ga0265338_10085659 Ga0265338_100856592 462
112 3300037853 Ga0436364_0963235 Ga0436364_0963235_871_2340 462
113 3300039447 Ga0436361_0762048 Ga0436361_0762048_932_2380 462
114 3300046457 Ga0495590_0001482 Ga0495590_0001482_863_2335 462
115 3300046512 Ga0495610_0009240 Ga0495610_0009240_3389_4861 462
116 3300046518 Ga0495631_0004159 Ga0495631_0004159_5582_7054 462
117 3300046520 Ga0495637_0015519 Ga0495637_0015519_148_1620 462
118 3300046524 Ga0495648_0000940 Ga0495648_0000940_26199_27674 462
119 3300046616 Ga0495668_0042442 Ga0495668_0042442_64_1536 462
120 3300047469 Ga0495673_0000381 Ga0495673_0000381_17597_19072 462
121 3300047472 Ga0495686_0000932 Ga0495686_0000932_23938_25410 462
122 3300048929 Ga0496126_0004137 Ga0496126_0004137_11636_13102 462
123 3300049459 Ga0495678_007835 Ga0495678_007835_835_2307 462
124 3300049570 Ga0501033_0005322 Ga0501033_0005322_8639_10096 462
125 3300049573 Ga0501037_0015352 Ga0501037_0015352_207_1664 462
126 3300049823 Ga0501044_0005817 Ga0501044_0005817_2310_3767 462
127 3300053086 Ga0500578_0000410 Ga0500578_0000410_30660_32132 462
128 3300053087 Ga0500643_002197 Ga0500643_002197_2079_3569 462
129 3300053088 Ga0500644_0000154 Ga0500644_0000154_31262_32737 462
130 3300053093 Ga0500651_0012561 Ga0500651_0012561_2774_4264 462
131 3300053108 Ga0500562_000295 Ga0500562_000295_7098_8564 462
132 3300053118 Ga0500594_0001916 Ga0500594_0001916_980_2452 462
133 3300053119 Ga0500595_008108 Ga0500595_008108_836_2299 462
134 3300053138 Ga0500564_014085 Ga0500564_014085_655_2130 462
135 3300053156 Ga0500622_0006712 Ga0500622_0006712_564_2036 462
136 3300053730 Ga0500645_005743 Ga0500645_005743_372_1838 462
137 3300025273 Ga0209673_1000788 Ga0209673_100078838 463
138 3300025291 Ga0209675_1006036 Ga0209675_10060362 463
139 3300025292 Ga0209676_1000188 Ga0209676_1000188110 463
140 3300025298 Ga0209050_1002823 Ga0209050_10028239 463
141 3300025304 Ga0209257_1001816 Ga0209257_10018167 463
142 3300033180 Ga0307510_10001043 Ga0307510_1000104317 463
143 3300046460 Ga0495638_0023073 Ga0495638_0023073_1307_2773 463
144 3300046616 Ga0495668_0000100 Ga0495668_0000100_64537_66009 463
145 3300048918 Ga0496115_0001601 Ga0496115_0001601_13295_14770 463
146 3300053122 Ga0500608_000027 Ga0500608_000027_48185_49657 463
147 3300053156 Ga0500622_0004111 Ga0500622_0004111_3602_5068 463
148 3300053156 Ga0500622_0007209 Ga0500622_0007209_2419_3888 463
149 3300003794 Ga0055531_10003134 Ga0055531_100031345 464
150 3300005262 Ga0065165_1006919 Ga0065165_10069193 464
151 3300025295 Ga0209564_1001719 Ga0209564_10017196 464
152 3300025297 Ga0209758_1004950 Ga0209758_10049505 464
153 3300025304 Ga0209257_1000224 Ga0209257_100022470 464
154 3300028794 Ga0307515_10101194 Ga0307515_101011941 464
155 3300031730 Ga0307516_10000001 Ga0307516_10000001399 464
156 3300037312 Ga0395899_0000018 Ga0395899_0000018_168849_170297 464
157 3300037312 Ga0395899_0017889 Ga0395899_0017889_3053_4558 464
158 3300037418 Ga0395900_0000008 Ga0395900_0000008_166044_167549 464
159 3300038443 Ga0395901_0000008 Ga0395901_0000008_312917_314422 464
160 3300046453 Ga0495627_000950 Ga0495627_000950_8788_10263 464
161 3300046460 Ga0495638_0001716 Ga0495638_0001716_14758_16233 464
162 3300046460 Ga0495638_0057982 Ga0495638_0057982_486_1961 464
163 3300046471 Ga0495650_0000068 Ga0495650_0000068_173884_175359 464
164 3300046506 Ga0495583_0000002 Ga0495583_0000002_702759_704228 464
165 3300046512 Ga0495610_0000111 Ga0495610_0000111_82106_83581 464
166 3300046512 Ga0495610_0009378 Ga0495610_0009378_612_2081 464
167 3300046513 Ga0495616_0000790 Ga0495616_0000790_2564_4039 464
168 3300046513 Ga0495616_0028560 Ga0495616_0028560_475_1950 464
169 3300046519 Ga0495632_0001020 Ga0495632_0001020_3856_5331 464
170 3300046520 Ga0495637_0004945 Ga0495637_0004945_3434_4909 464
171 3300046530 Ga0495654_0000051 Ga0495654_0000051_53373_54848 464
172 3300046660 Ga0495625_0000198 Ga0495625_0000198_88707_90176 464
173 3300047320 Ga0495672_0008270 Ga0495672_0008270_4994_6469 464
174 3300047323 Ga0495683_0044922 Ga0495683_0044922_319_1794 464
175 3300048909 Ga0496106_0006357 Ga0496106_0006357_3950_5419 464
176 3300048910 Ga0496107_0000474 Ga0496107_0000474_10007_11476 464
177 3300048924 Ga0496121_0001901 Ga0496121_0001901_27796_29265 464
178 3300050496 nmdc:mga07m45_1102_c1 nmdc:mga07m45_1102_c1_38_1513 464
179 3300053087 Ga0500643_000545 Ga0500643_000545_3893_5377 464
180 3300053096 Ga0500641_0001188 Ga0500641_0001188_3973_5457 464
181 3300053102 Ga0500554_004902 Ga0500554_004902_188_1663 464
182 3300053103 Ga0500555_017826 Ga0500555_017826_177_1652 464
183 3300053104 Ga0500556_0000650 Ga0500556_0000650_4543_6018 464
184 3300053123 Ga0500614_006757 Ga0500614_006757_459_1934 464
185 3300053125 Ga0500618_000153 Ga0500618_000153_52139_53608 464
186 3300053136 Ga0500559_0001786 Ga0500559_0001786_7180_8649 464
187 3300053142 Ga0500577_0017428 Ga0500577_0017428_617_2092 464
188 3300053158 Ga0500627_0032969 Ga0500627_0032969_428_1903 464
189 3300053730 Ga0500645_000604 Ga0500645_000604_11419_12903 464
190 iso_pu_bacteria 2582581280 2585151852 464
191 iso_pu_bacteria 2582581293 2585194662 464
192 iso_pu_bacteria 2643221552 2643778876 464
193 iso_pu_bacteria 2643221584 2643930722 464
194 iso_pu_bacteria 2818991435 2819540067 464
195 iso_pu_bacteria 2818991454 2819649105 464
196 3300006178 Ga0075367_10026638 Ga0075367_100266384 466
197 3300009177 Ga0105248_10000097 Ga0105248_1000009733 466
198 3300025927 Ga0207687_10074139 Ga0207687_100741392 466
199 3300025941 Ga0207711_10002325 Ga0207711_100023259 466
200 3300050494 nmdc:mga06z11_66104_c1 nmdc:mga06z11_66104_c1_139_1608 466
201 3300005347 Ga0070668_100006480 Ga0070668_1000064808 467
202 3300005347 Ga0070668_100017970 Ga0070668_1000179704 467
203 3300005353 Ga0070669_100013575 Ga0070669_1000135756 467
204 3300005355 Ga0070671_100002841 Ga0070671_1000028412 467
205 3300005367 Ga0070667_100004470 Ga0070667_1000044705 467
206 3300005617 Ga0068859_100000168 Ga0068859_10000016819 467
207 3300005618 Ga0068864_100000095 Ga0068864_10000009558 467
208 3300005841 Ga0068863_100004340 Ga0068863_1000043405 467
209 3300005841 Ga0068863_100004525 Ga0068863_1000045253 467
210 3300005842 Ga0068858_100005728 Ga0068858_1000057288 467
211 3300005842 Ga0068858_100043624 Ga0068858_1000436245 467
212 3300005843 Ga0068860_100000204 Ga0068860_10000020451 467
213 3300005843 Ga0068860_100118836 Ga0068860_1001188363 467
214 3300005844 Ga0068862_100026039 Ga0068862_1000260394 467
215 3300006042 Ga0075368_10002719 Ga0075368_100027197 467
216 3300006931 Ga0097620_100000168 Ga0097620_10000016850 467
217 3300009553 Ga0105249_10008289 Ga0105249_100082897 467
218 3300009553 Ga0105249_10125029 Ga0105249_101250292 467
219 3300013306 Ga0163162_10006234 Ga0163162_100062343 467
220 3300014325 Ga0163163_10072949 Ga0163163_100729492 467
221 3300014968 Ga0157379_10001371 Ga0157379_100013714 467
222 3300014968 Ga0157379_10009143 Ga0157379_1000914310 467
223 3300025903 Ga0207680_10008982 Ga0207680_100089825 467
224 3300025923 Ga0207681_10012126 Ga0207681_100121263 467
225 3300025925 Ga0207650_10000030 Ga0207650_1000003058 467
226 3300025931 Ga0207644_10009687 Ga0207644_100096872 467
227 3300025941 Ga0207711_10085033 Ga0207711_100850331 467
228 3300025972 Ga0207668_10000152 Ga0207668_1000015238 467
229 3300025972 Ga0207668_10003988 Ga0207668_100039888 467
230 3300025986 Ga0207658_10013550 Ga0207658_100135503 467
231 3300026088 Ga0207641_10014242 Ga0207641_100142427 467
232 3300026088 Ga0207641_10025200 Ga0207641_100252003 467
233 3300026095 Ga0207676_10000095 Ga0207676_1000009558 467
234 3300028381 Ga0268264_10000125 Ga0268264_10000125143 467
235 3300028381 Ga0268264_10031250 Ga0268264_100312504 467
236 3300028786 Ga0307517_10004171 Ga0307517_100041717 467
237 3300028800 Ga0265338_10014163 Ga0265338_100141634 467
238 3300028800 Ga0265338_10097911 Ga0265338_100979112 467
239 3300039437 Ga0436365_1926423 Ga0436365_1926423_1264_2760 467
240 3300046684 Ga0495669_0000009 Ga0495669_0000009_140555_142051 467
241 3300006946 Ga0079104_1018803 Ga0079104_10188032 468
242 3300028786 Ga0307517_10017856 Ga0307517_100178564 468
243 3300037418 Ga0395900_0014019 Ga0395900_0014019_6472_7956 468
244 3300037466 Ga0395898_0017875 Ga0395898_0017875_1231_2715 468
245 3300038443 Ga0395901_0086758 Ga0395901_0086758_202_1686 468
246 3300046459 Ga0495629_0027789 Ga0495629_0027789_2336_3820 468
247 3300046522 Ga0495643_0038573 Ga0495643_0038573_348_1832 468
248 3300046538 Ga0495609_0013061 Ga0495609_0013061_744_2228 468
249 3300046542 Ga0495597_0001663 Ga0495597_0001663_1645_3129 468
250 3300046557 Ga0495622_0001430 Ga0495622_0001430_2498_3982 468
251 3300049460 Ga0495682_0012080 Ga0495682_0012080_1373_2857 468
252 3300053086 Ga0500578_0034801 Ga0500578_0034801_213_1697 468
253 3300053093 Ga0500651_0012179 Ga0500651_0012179_1592_3076 468
254 3300053104 Ga0500556_0006203 Ga0500556_0006203_1589_3055 468
255 3300053119 Ga0500595_003191 Ga0500595_003191_1342_2826 468
256 3300053122 Ga0500608_000610 Ga0500608_000610_8097_9581 468
257 3300053123 Ga0500614_002861 Ga0500614_002861_437_1921 468
258 3300053134 Ga0500658_0035494 Ga0500658_0035494_276_1760 468
259 3300053148 Ga0500590_018606 Ga0500590_018606_1718_3202 468
260 3300053178 Ga0500637_0026928 Ga0500637_0026928_1388_2872 468
261 3300053725 Ga0500576_051018 Ga0500576_051018_224_1708 468
262 3300053729 Ga0500625_001140 Ga0500625_001140_1270_2754 468
263 3300053735 Ga0500596_000607 Ga0500596_000607_2199_3683 468
264 iso_pu_bacteria 2643221614 2644088771 468
265 iso_pu_bacteria 2643221661 2644344006 468
266 iso_pu_bacteria 2643221666 2644368515 468
267 3300005331 Ga0070670_100030354 Ga0070670_1000303545 469
268 3300005336 Ga0070680_100074768 Ga0070680_1000747685 469
269 3300005347 Ga0070668_100001146 Ga0070668_10000114624 469
270 3300005458 Ga0070681_10050123 Ga0070681_100501234 469
271 3300005563 Ga0068855_100049823 Ga0068855_1000498233 469
272 3300005618 Ga0068864_100028239 Ga0068864_1000282393 469
273 3300005719 Ga0068861_100013427 Ga0068861_1000134277 469
274 3300005841 Ga0068863_100000045 Ga0068863_10000004558 469
275 3300005841 Ga0068863_100017299 Ga0068863_1000172994 469
276 3300005842 Ga0068858_100000144 Ga0068858_10000014475 469
277 3300005843 Ga0068860_100000037 Ga0068860_100000037101 469
278 3300009093 Ga0105240_10148740 Ga0105240_101487401 469
279 3300009177 Ga0105248_10004878 Ga0105248_1000487821 469
280 3300009177 Ga0105248_10016234 Ga0105248_100162346 469
281 3300014968 Ga0157379_10127375 Ga0157379_101273751 469
282 3300025941 Ga0207711_10001523 Ga0207711_1000152322 469
283 3300025941 Ga0207711_10019610 Ga0207711_100196106 469
284 3300025949 Ga0207667_10118137 Ga0207667_101181371 469
285 3300026035 Ga0207703_10000557 Ga0207703_1000055732 469
286 3300026035 Ga0207703_10023419 Ga0207703_100234197 469
287 3300026088 Ga0207641_10000011 Ga0207641_10000011103 469
288 3300026095 Ga0207676_10000114 Ga0207676_1000011471 469
289 3300026095 Ga0207676_10129600 Ga0207676_101296002 469
290 3300026118 Ga0207675_100009581 Ga0207675_1000095819 469
291 3300028381 Ga0268264_10000002 Ga0268264_10000002179 469
292 3300048905 Ga0496102_0091018 Ga0496102_0091018_29_1516 469
293 3300048924 Ga0496121_0000442 Ga0496121_0000442_19763_21250 469
294 3300049570 Ga0501033_0016730 Ga0501033_0016730_4009_5478 469
295 3300049742 Ga0501080_0169843 Ga0501080_0169843_141_1610 469
296 3300049823 Ga0501044_0012686 Ga0501044_0012686_5912_7381 469
297 3300053080 Ga0500635_0000125 Ga0500635_0000125_28809_30296 469
298 3300053177 Ga0500636_0035677 Ga0500636_0035677_293_1780 469
299 3300053730 Ga0500645_003419 Ga0500645_003419_2999_4486 469
300 3300025986 Ga0207658_10000935 Ga0207658_100009353 470
301 3300031251 Ga0265327_10009150 Ga0265327_100091506 470
302 3300049822 Ga0501035_0149938 Ga0501035_0149938_321_1793 470
303 iso_pu_bacteria 2643221598 2644001483 470
304 3300005563 Ga0068855_100095487 Ga0068855_1000954872 471
305 3300025913 Ga0207695_10041158 Ga0207695_100411583 471
306 3300035170 Ga0373943_0014062 Ga0373943_0014062_1200_2690 471
307 3300035695 Ga0373927_0002828 Ga0373927_0002828_7547_9037 471
308 3300037068 Ga0373925_0000089 Ga0373925_0000089_28099_29589 471
309 3300046684 Ga0495669_0000358 Ga0495669_0000358_8816_10303 471
310 3300046684 Ga0495669_0018706 Ga0495669_0018706_351_1847 471
311 3300005457 Ga0070662_100077163 Ga0070662_1000771632 472
312 3300005548 Ga0070665_100000221 Ga0070665_10000022146 472
313 3300005618 Ga0068864_100005107 Ga0068864_1000051072 472
314 3300013306 Ga0163162_10104620 Ga0163162_101046204 472
315 3300025909 Ga0207705_10001493 Ga0207705_1000149314 472
316 3300025913 Ga0207695_10017499 Ga0207695_100174998 472
317 3300025913 Ga0207695_10021182 Ga0207695_100211821 472
318 3300025919 Ga0207657_10003180 Ga0207657_1000318012 472
319 3300025921 Ga0207652_10021668 Ga0207652_100216685 472
320 3300025931 Ga0207644_10037844 Ga0207644_100378442 472
321 3300025932 Ga0207690_10000077 Ga0207690_1000007795 472
322 3300025933 Ga0207706_10115942 Ga0207706_101159422 472
323 3300025941 Ga0207711_10072212 Ga0207711_100722121 472
324 3300025949 Ga0207667_10006714 Ga0207667_100067146 472
325 3300026041 Ga0207639_10102972 Ga0207639_101029722 472
326 3300026088 Ga0207641_10032081 Ga0207641_100320812 472
327 3300027543 Ga0209999_1000345 Ga0209999_10003456 472
328 3300028379 Ga0268266_10000005 Ga0268266_1000000545 472
329 3300031456 Ga0307513_10006613 Ga0307513_100066139 472
330 3300046528 Ga0495642_0004863 Ga0495642_0004863_1432_2928 472
331 3300046528 Ga0495642_0030317 Ga0495642_0030317_181_1677 472
332 3300046660 Ga0495625_0033762 Ga0495625_0033762_270_1766 472
333 3300046664 Ga0495659_0034881 Ga0495659_0034881_172_1668 472
334 3300048905 Ga0496102_0067731 Ga0496102_0067731_1236_2732 472
335 3300048906 Ga0496103_0036908 Ga0496103_0036908_631_2127 472
336 3300048911 Ga0496108_0107758 Ga0496108_0107758_545_2041 472
337 3300048913 Ga0496110_0040915 Ga0496110_0040915_1909_3405 472
338 3300048915 Ga0496112_0031571 Ga0496112_0031571_2451_3947 472
339 3300048916 Ga0496113_0091070 Ga0496113_0091070_412_1908 472
340 3300048918 Ga0496115_0088837 Ga0496115_0088837_58_1560 472
341 3300048928 Ga0496125_0024834 Ga0496125_0024834_2386_3963 472
342 3300049581 Ga0501047_0030043 Ga0501047_0030043_150_1631 472
343 3300053122 Ga0500608_031607 Ga0500608_031607_438_1940 472
344 3300006881 Ga0068865_100000625 Ga0068865_1000006253 473
345 3300009093 Ga0105240_10003057 Ga0105240_1000305716 473
346 3300009551 Ga0105238_10012001 Ga0105238_100120017 473
347 3300025304 Ga0209257_1000592 Ga0209257_100059222 473
348 3300025913 Ga0207695_10001415 Ga0207695_1000141516 473
349 3300025924 Ga0207694_10007455 Ga0207694_100074557 473
350 3300031456 Ga0307513_10089307 Ga0307513_100893074 473
351 3300035113 Ga0373936_0019309 Ga0373936_0019309_66_1568 473
352 3300047320 Ga0495672_0026786 Ga0495672_0026786_1731_3230 473
353 3300048915 Ga0496112_0172987 Ga0496112_0172987_430_1950 473
354 3300049686 Ga0501257_003089 Ga0501257_003089_1397_2899 473
355 3300003791 Ga0055530_10000090 Ga0055530_1000009073 474
356 3300003794 Ga0055531_10006027 Ga0055531_100060273 474
357 3300005262 Ga0065165_1000171 Ga0065165_1000171120 474
358 3300006177 Ga0075362_10040427 Ga0075362_100404271 474
359 3300025297 Ga0209758_1009117 Ga0209758_10091173 474
360 3300025298 Ga0209050_1000095 Ga0209050_1000095125 474
361 3300025304 Ga0209257_1000106 Ga0209257_1000106128 474
362 3300031456 Ga0307513_10000203 Ga0307513_1000020356 474
363 3300031548 Ga0307408_100086233 Ga0307408_1000862332 474
364 3300048918 Ga0496115_0004311 Ga0496115_0004311_2911_4446 474

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00158

Sigma54_activat

Sigma-54 interaction domain

172

339

0.99

PF00072

Response_reg

Response regulator receiver domain

33

144

0.97

PF02954

HTH_8

Bacterial regulatory protein, Fis family

465

505

0.96

PF14532

Sigma54_activ_2

Sigma-54 interaction domain

173

343

0.89

PF00004

AAA

ATPase family associated with various cellular activities (AAA)

196

338

0.78

PF07728

AAA_5

AAA domain (dynein-related subfamily)

195

326

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
1nxx-assembly1.cif.gz_A-2 micarec ph 5.5 0.9759 3 121
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9734 3 123
4kny-assembly1.cif.gz_A crystal structure of the response regulator kdpe complexed to dna in an active-like conformation 0.9718 1 120
3w9s-assembly1.cif.gz_B crystal structure analysis of the n-terminal receiver domain of response regulator pmra 0.9706 5 120
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9706 3 121
ID Description Score Start End Superfamily
5m7nA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9737 143 311 3.40.50.300
4l5eA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9717 412 455 1.10.10.60
af_Q2FWH6_1_124_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9701 1 122 3.40.50.2300
af_P69228_9_89_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.969 1 83 3.40.50.2300
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9686 2 83 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A2A4ETN8-F1-model_v4 Two-component system response regulator OmpR 0.9788 1 120 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A6P2AVZ8-F1-model_v4 Response regulator 0.9766 4 119 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2N5JMI0-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9753 1 120 GO:0000155
GO:0005737
GO:0006935
AF-A0A561UFY8-F1-model_v4 Two-component system OmpR family response regulator 0.9714 2 123 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993
AF-A0A2V8H8E6-F1-model_v4 DNA-binding response regulator 0.9708 3 120 GO:0000156
GO:0000976
GO:0005829
GO:0006355
GO:0032993

Feature Viewer

pLDDT pTM Quality
80.27 0.53 Medium
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Predicted Structure (AlphaFold2)

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