F423357

General Info

Members Datasets Scaffolds Average Seq Length
364 213 333 438

Family's Representative Sequence

Representative Sequence 3300027378|Ga0209981_1001873|Ga0209981_10018733
Length 494
Sequence VIHPDREARSASRNPDARLEEAVGLALALDLEIRDRLVVTLRRTMPATLFGKGKVEELGRMLELAEADVAIVDDALTPVQQRNLEKAWQVKVIDRTGLILEIFARRARTREGRLQVELARLNYERSRLVRTWTHLERQRGGFGVMGGPGETQIETDRRLLSEKVGKLKKELTEVRRTRTLQRSARKRHPYPTVALVGYTNAGKSTLFNRLTGSEVVAEDMLFATLDPTLRMLKLPDGRPAILSDTVGFISDLPHELVEAFRATLEEVKEADVVLHVRDISSPDSNAQAQDVRTVLAKLDADMAERTILEVWNKIDLLDPDRRVSVLAQGPKYGIGRTPTTEEIKAIDISIGPTGEELPPGKGSPKEGAQLYRTKGCAACHGAQAIEGPAPNLKSKDPKNPDVWARGRILPLRAPFATTVWDYINRAMPLNREGTLTADEVYALTAFLLFINDVIPEDQVLDAQSLPKVKMPIGDRYASLPDWKPKTPRLKGYPY

Samples

Sample ID Description Type Environment
1 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
2 2582581279 Caulobacter henricii OK261 Isolate Rhizosphere
3 2582581280 Caulobacter henricii CF287 Isolate Rhizosphere
4 2582581293 Caulobacter henricii YR570 Isolate Rhizosphere
5 2585428106 Caulobacter sp. OV484 Isolate Rhizosphere
6 2643221545 Caulobacter sp. Root1455 Isolate Unclassified
7 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
8 2643221583 Caulobacter sp. Root655 Isolate Unclassified
9 2643221584 Caulobacter sp. Root656 Isolate Unclassified
10 2643221598 Phenylobacterium sp. Root700 Isolate Unclassified
11 2643221614 Phenylobacterium sp. Root77 Isolate Unclassified
12 2643221640 Caulobacter sp. Root342 Isolate Unclassified
13 2643221642 Caulobacter sp. Root343 Isolate Unclassified
14 2643221661 Phenylobacterium sp. Root1277 Isolate Unclassified
15 2643221663 Brevundimonas sp. Root1279 Isolate Unclassified
16 2643221666 Phenylobacterium sp. Root1290 Isolate Unclassified
17 2643221691 Caulobacter sp. Root487D2Y Isolate Unclassified
18 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
19 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
20 2818991435 Caulobacter henricii 536 Isolate Unclassified
21 2818991454 Caulobacter rhizosphaerae 3260 Isolate Rhizosphere
22 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
23 2849560528 Caulobacter zeae 410 Isolate Unclassified
24 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
25 2851153111 Caulobacter radicis 736 Isolate Unclassified
26 2857504554 Caulobacter sp. R-72291 Isolate Unclassified
27 2884960567 Caulobacter sp. 602-1 Isolate Rhizosphere
28 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
29 2928531327 Caulobacter sp. 1776 Isolate Rhizosphere
30 2928972540 Brevundimonas sp. 1080 Isolate Rhizosphere
31 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
32 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
33 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
34 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
35 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
36 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
37 3300003791 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 Metagenome Endosphere
38 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
39 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
40 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
41 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
42 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
43 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
44 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
45 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
46 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
47 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
48 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
49 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
50 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
51 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
52 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
53 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
54 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
55 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
56 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
57 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
58 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
59 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
60 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
61 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
62 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
63 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
64 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
65 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
66 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
67 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
73 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
74 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
78 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
79 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
80 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
82 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
83 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
86 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
114 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
115 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
116 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
117 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
118 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
119 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
120 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
121 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
122 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
123 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
124 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
125 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
126 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
127 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
128 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
129 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
130 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
131 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
132 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
133 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
134 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
135 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
136 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
137 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
138 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
139 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
140 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
141 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
142 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
143 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
144 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
145 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
146 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
147 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
148 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
149 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
150 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
151 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
152 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
153 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
154 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
155 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
156 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
157 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
158 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
159 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
160 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
161 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
162 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
163 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
164 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
165 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
170 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
171 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
172 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
173 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
174 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
175 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
176 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
177 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
178 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
179 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
180 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
181 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
182 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
183 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
184 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
185 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
186 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
187 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
188 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
189 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
190 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
191 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
192 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
193 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
194 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
195 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
196 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
197 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
198 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
199 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
200 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
201 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
202 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
203 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
204 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
205 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
206 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
207 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
208 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
209 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
210 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
211 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
212 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
213 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 91.48
Metatranscriptomes 0
Isolates 8.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 24.18
Nodule 0
Rhizoplane 4.67
Rhizosphere 60.71
Stem 0
Stem Tuber 0
Unclassified 10.44

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25153J46596_10011054 3300003215 Bacteria 4021
2 Ga0055526_1024533 3300003771 Bacteria 1969
3 Ga0055524_1017917 3300003775 Bacteria 2480
4 Ga0055536_1004131 3300003781 Bacteria 7528
5 Ga0055536_1009633 3300003781 Bacteria 3959
6 Ga0055536_1009641 3300003781 Bacteria 3956
7 Ga0055528_1009282 3300003790 Bacteria 4123
8 Ga0055530_10008860 3300003791 Bacteria 3961
9 Ga0055530_10008864 3300003791 Bacteria 3959
10 Ga0055531_10001651 3300003794 Bacteria 16116
11 Ga0055531_10003859 3300003794 Bacteria 9380
12 Ga0055531_10004432 3300003794 Bacteria 8554
13 Ga0055531_10017703 3300003794 Bacteria 2990
14 Ga0065165_1000277 3300005262 Bacteria 87540
15 Ga0065165_1000979 3300005262 Bacteria 35374
16 Ga0070670_100000037 3300005331 Bacteria 156070
17 Ga0070670_100042691 3300005331 Bacteria 3899
18 Ga0070680_100014024 3300005336 Bacteria 6256
19 Ga0070660_100025974 3300005339 Bacteria 4358
20 Ga0070660_100210216 3300005339 Bacteria 1579
21 Ga0070691_10016761 3300005341 Bacteria 3369
22 Ga0070668_100000097 3300005347 Bacteria 53800
23 Ga0070668_100003647 3300005347 Bacteria 11362
24 Ga0070669_100009680 3300005353 Bacteria 6864
25 Ga0070659_100000206 3300005366 Bacteria 45867
26 Ga0070659_100037343 3300005366 Bacteria 3787
27 Ga0070667_100000083 3300005367 Bacteria 118261
28 Ga0070667_100015009 3300005367 Bacteria 6400
29 Ga0070667_100019958 3300005367 Bacteria 5563
30 Ga0070667_100051675 3300005367 Bacteria 3465
31 Ga0070681_10012032 3300005458 Bacteria 8581
32 Ga0070681_10020463 3300005458 Bacteria 6632
33 Ga0068853_100080066 3300005539 Bacteria 2858
34 Ga0068853_100172769 3300005539 Bacteria 1956
35 Ga0070665_100000116 3300005548 Bacteria 150141
36 Ga0070665_100000278 3300005548 Bacteria 84248
37 Ga0070665_100002488 3300005548 Bacteria 20280
38 Ga0070665_100019655 3300005548 Bacteria 6779
39 Ga0068855_100041785 3300005563 Bacteria 5433
40 Ga0068854_100152084 3300005578 Bacteria 1785
41 Ga0068859_100012653 3300005617 Bacteria 8482
42 Ga0068859_100130852 3300005617 Bacteria 2581
43 Ga0068864_100000115 3300005618 Bacteria 79542
44 Ga0068864_100001225 3300005618 Bacteria 21325
45 Ga0068864_100012817 3300005618 Bacteria 6932
46 Ga0068864_100147155 3300005618 Bacteria 2131
47 Ga0068861_100060146 3300005719 Bacteria 2911
48 Ga0068863_100000007 3300005841 Bacteria 257578
49 Ga0068863_100000392 3300005841 Bacteria 44421
50 Ga0068863_100001891 3300005841 Bacteria 20782
51 Ga0068863_100255657 3300005841 Bacteria 1693
52 Ga0068858_100000031 3300005842 Bacteria 143397
53 Ga0068858_100009930 3300005842 Bacteria 9041
54 Ga0068858_100058358 3300005842 Bacteria 3568
55 Ga0068858_100071891 3300005842 Bacteria 3209
56 Ga0068860_100000128 3300005843 Bacteria 122731
57 Ga0068860_100000145 3300005843 Bacteria 115830
58 Ga0068860_100061797 3300005843 Bacteria 3559
59 Ga0068862_100000121 3300005844 Bacteria 91849
60 Ga0068862_100103173 3300005844 Bacteria 2497
61 Ga0075368_10000507 3300006042 Bacteria 11578
62 Ga0075363_100074306 3300006048 Bacteria 1850
63 Ga0075364_10001151 3300006051 Bacteria 14133
64 Ga0075366_10025206 3300006195 Bacteria 3472
65 Ga0075370_10056959 3300006353 Bacteria 2221
66 Ga0068865_100001650 3300006881 Bacteria 13080
67 Ga0097620_100012653 3300006931 Bacteria 8482
68 Ga0097620_100130848 3300006931 Bacteria 2581
69 Ga0105250_10016590 3300009092 Bacteria 2998
70 Ga0105240_10002344 3300009093 Bacteria 30572
71 Ga0105240_10003036 3300009093 Bacteria 26403
72 Ga0105240_10018748 3300009093 Bacteria 9271
73 Ga0105240_10050418 3300009093 Bacteria 5248
74 Ga0105240_10071260 3300009093 Bacteria 4299
75 Ga0105248_10000154 3300009177 Bacteria 80081
76 Ga0105248_10021528 3300009177 Bacteria 7141
77 Ga0105248_10056757 3300009177 Bacteria 4393
78 Ga0105238_10002686 3300009551 Bacteria 17688
79 Ga0105238_10036220 3300009551 Bacteria 5015
80 Ga0105238_10072766 3300009551 Bacteria 3432
81 Ga0105249_10000410 3300009553 Bacteria 41122
82 Ga0105239_10183475 3300010375 Bacteria 2341
83 Ga0157373_10000955 3300013100 Bacteria 22427
84 Ga0157373_10001704 3300013100 Bacteria 16742
85 Ga0157370_10064898 3300013104 Bacteria 3455
86 Ga0163163_10002453 3300014325 Bacteria 15680
87 Ga0163163_10008010 3300014325 Bacteria 9352
88 Ga0157379_10002929 3300014968 Bacteria 14405
89 Ga0157379_10027128 3300014968 Bacteria 5099
90 Ga0157379_10119639 3300014968 Bacteria 2369
91 Ga0213876_10023034 3300021384 Bacteria 3291
92 Ga0209565_1000475 3300025263 Bacteria 29667
93 Ga0209673_1000941 3300025273 Bacteria 36504
94 Ga0209676_1000057 3300025292 Bacteria 361061
95 Ga0209676_1000061 3300025292 Bacteria 332674
96 Ga0209676_1001335 3300025292 Bacteria 24868
97 Ga0209676_1002066 3300025292 Bacteria 15614
98 Ga0209564_1005262 3300025295 Bacteria 7468
99 Ga0209564_1018089 3300025295 Bacteria 2707
100 Ga0209758_1001598 3300025297 Bacteria 25915
101 Ga0209758_1002304 3300025297 Bacteria 19732
102 Ga0209758_1004011 3300025297 Bacteria 12728
103 Ga0209050_1000135 3300025298 Bacteria 184020
104 Ga0209050_1000200 3300025298 Bacteria 134115
105 Ga0209050_1001221 3300025298 Bacteria 29961
106 Ga0209050_1023677 3300025298 Bacteria 2151
107 Ga0209256_1001833 3300025299 Bacteria 19808
108 Ga0209256_1002440 3300025299 Bacteria 15186
109 Ga0209256_1008535 3300025299 Bacteria 4725
110 Ga0209256_1011418 3300025299 Bacteria 3554
111 Ga0209257_1000225 3300025304 Bacteria 134023
112 Ga0209257_1000350 3300025304 Bacteria 95008
113 Ga0209257_1000439 3300025304 Bacteria 79332
114 Ga0209257_1002835 3300025304 Bacteria 16261
115 Ga0209257_1008207 3300025304 Bacteria 6033
116 Ga0207696_1017211 3300025711 Bacteria 2399
117 Ga0207680_10012538 3300025903 Bacteria 4320
118 Ga0207705_10083352 3300025909 Bacteria 2332
119 Ga0207707_10133457 3300025912 Bacteria 2171
120 Ga0207695_10001670 3300025913 Bacteria 35733
121 Ga0207695_10001727 3300025913 Bacteria 34901
122 Ga0207695_10011998 3300025913 Bacteria 10426
123 Ga0207695_10012731 3300025913 Bacteria 10072
124 Ga0207695_10026722 3300025913 Bacteria 6439
125 Ga0207695_10134443 3300025913 Bacteria 2427
126 Ga0207660_10006796 3300025917 Bacteria 7410
127 Ga0207660_10056935 3300025917 Bacteria 2799
128 Ga0207681_10026538 3300025923 Bacteria 3737
129 Ga0207694_10042964 3300025924 Bacteria 3488
130 Ga0207650_10000099 3300025925 Bacteria 113522
131 Ga0207650_10029759 3300025925 Bacteria 3928
132 Ga0207650_10039766 3300025925 Bacteria 3438
133 Ga0207690_10000129 3300025932 Bacteria 62350
134 Ga0207690_10025820 3300025932 Bacteria 3693
135 Ga0207690_10031992 3300025932 Bacteria 3372
136 Ga0207704_10001553 3300025938 Bacteria 10296
137 Ga0207711_10000574 3300025941 Bacteria 37451
138 Ga0207711_10002202 3300025941 Bacteria 17507
139 Ga0207667_10105079 3300025949 Bacteria 2913
140 Ga0207712_10003410 3300025961 Bacteria 10044
141 Ga0207668_10000028 3300025972 Bacteria 125361
142 Ga0207668_10000828 3300025972 Bacteria 18733
143 Ga0207668_10003243 3300025972 Bacteria 9540
144 Ga0207668_10009033 3300025972 Bacteria 5956
145 Ga0207658_10000209 3300025986 Bacteria 61041
146 Ga0207658_10007659 3300025986 Bacteria 7353
147 Ga0207658_10017377 3300025986 Bacteria 4956
148 Ga0207658_10021798 3300025986 Bacteria 4452
149 Ga0207703_10000038 3300026035 Bacteria 175917
150 Ga0207703_10032193 3300026035 Bacteria 4149
151 Ga0207639_10018947 3300026041 Bacteria 4900
152 Ga0207639_10206536 3300026041 Bacteria 1688
153 Ga0207678_10055804 3300026067 Bacteria 3402
154 Ga0207641_10000012 3300026088 Bacteria 375486
155 Ga0207641_10000341 3300026088 Bacteria 56155
156 Ga0207641_10004917 3300026088 Bacteria 11484
157 Ga0207641_10031354 3300026088 Bacteria 4409
158 Ga0207676_10000610 3300026095 Bacteria 29371
159 Ga0207676_10000637 3300026095 Bacteria 28167
160 Ga0207676_10008902 3300026095 Bacteria 7143
161 Ga0207676_10154975 3300026095 Bacteria 1978
162 Ga0207675_100040064 3300026118 Bacteria 4372
163 Ga0207698_10062272 3300026142 Bacteria 2912
164 Ga0209981_1001873 3300027378 Bacteria 2678
165 Ga0268266_10000064 3300028379 Bacteria 249533
166 Ga0268266_10001158 3300028379 Bacteria 32665
167 Ga0268266_10005451 3300028379 Bacteria 11854
168 Ga0268265_10001336 3300028380 Bacteria 21037
169 Ga0268265_10004938 3300028380 Bacteria 9173
170 Ga0268265_10112884 3300028380 Bacteria 2222
171 Ga0268264_10000046 3300028381 Bacteria 364597
172 Ga0268264_10000059 3300028381 Bacteria 306927
173 Ga0265334_10001441 3300028573 Bacteria 11435
174 Ga0307517_10012250 3300028786 Bacteria 11791
175 Ga0307515_10025849 3300028794 Bacteria 10133
176 Ga0307515_10046005 3300028794 Bacteria 6684
177 Ga0265338_10019502 3300028800 Bacteria 7189
178 Ga0265338_10058540 3300028800 Bacteria 3400
179 Ga0265338_10073709 3300028800 Bacteria 2908
180 Ga0307511_10023276 3300030521 Bacteria 5780
181 Ga0265327_10000166 3300031251 Bacteria 141539
182 Ga0265327_10002712 3300031251 Bacteria 18137
183 Ga0265327_10006559 3300031251 Bacteria 9263
184 Ga0307513_10001153 3300031456 Bacteria 38347
185 Ga0307513_10002695 3300031456 Bacteria 24428
186 Ga0307513_10005321 3300031456 Bacteria 17020
187 Ga0265314_10035212 3300031711 Bacteria 3651
188 Ga0265314_10077579 3300031711 Bacteria 2203
189 Ga0307516_10000004 3300031730 Bacteria 367451
190 Ga0307413_10106739 3300031824 Bacteria 1865
191 Ga0307410_10015735 3300031852 Bacteria 4495
192 Ga0307406_10000761 3300031901 Bacteria 18132
193 Ga0307412_10022526 3300031911 Bacteria 3863
194 Ga0373931_0082732 3300035691 Bacteria 1775
195 Ga0373935_0057931 3300035692 Bacteria 2473
196 Ga0373925_0000478 3300037068 Bacteria 39975
197 Ga0395899_0000013 3300037312 Bacteria 510397
198 Ga0395899_0000407 3300037312 Bacteria 50216
199 Ga0395899_0038572 3300037312 Bacteria 3578
200 Ga0395900_0000009 3300037418 Bacteria 476249
201 Ga0395900_0022246 3300037418 Bacteria 6487
202 Ga0395900_0145988 3300037418 Bacteria 2419
203 Ga0395898_0027308 3300037466 Bacteria 5732
204 Ga0395905_0004384 3300037471 Bacteria 14687
205 Ga0395905_0135408 3300037471 Bacteria 2317
206 Ga0395905_0148262 3300037471 Bacteria 2207
207 Ga0395905_0180221 3300037471 Bacteria 1983
208 Ga0395901_0000014 3300038443 Bacteria 375100
209 Ga0436365_0504517 3300039437 Bacteria 6100
210 Ga0436365_1718085 3300039437 Bacteria 3611
211 Ga0436361_0394361 3300039447 Bacteria 1649
212 Ga0436361_1148114 3300039447 Bacteria 29234
213 Ga0466959_0017967 3300045049 Bacteria 5189
214 Ga0495627_002098 3300046453 Bacteria 10119
215 Ga0495638_0000585 3300046460 Bacteria 41159
216 Ga0495638_0000595 3300046460 Bacteria 40733
217 Ga0495638_0004039 3300046460 Bacteria 11253
218 Ga0495638_0070579 3300046460 Bacteria 2138
219 Ga0495650_0000007 3300046471 Bacteria 718072
220 Ga0495583_0000037 3300046506 Bacteria 244437
221 Ga0495606_0041127 3300046507 Bacteria 3101
222 Ga0495610_0000205 3300046512 Bacteria 65600
223 Ga0495610_0001459 3300046512 Bacteria 20922
224 Ga0495610_0003505 3300046512 Bacteria 12191
225 Ga0495616_0000159 3300046513 Bacteria 58948
226 Ga0495631_0007090 3300046518 Bacteria 5731
227 Ga0495631_0038935 3300046518 Bacteria 2112
228 Ga0495632_0002841 3300046519 Bacteria 12803
229 Ga0495637_0030677 3300046520 Bacteria 2383
230 Ga0495648_0000029 3300046524 Bacteria 223499
231 Ga0495648_0052484 3300046524 Bacteria 2476
232 Ga0495654_0000100 3300046530 Bacteria 98615
233 Ga0495622_0023187 3300046557 Bacteria 2893
234 Ga0495633_0000371 3300046558 Bacteria 48203
235 Ga0495668_0000345 3300046616 Bacteria 61921
236 Ga0495668_0075190 3300046616 Bacteria 1855
237 Ga0495668_0128469 3300046616 Bacteria 1387
238 Ga0495625_0000080 3300046660 Bacteria 156895
239 Ga0495625_0006452 3300046660 Bacteria 10438
240 Ga0495625_0007880 3300046660 Bacteria 9174
241 Ga0495669_0000024 3300046684 Bacteria 113943
242 Ga0495669_0000294 3300046684 Bacteria 28302
243 Ga0495613_0004373 3300046689 Bacteria 10572
244 Ga0495649_0000868 3300046694 Bacteria 24311
245 Ga0495660_0034559 3300046810 Bacteria 2828
246 Ga0495672_0027097 3300047320 Bacteria 3647
247 Ga0495672_0027862 3300047320 Bacteria 3583
248 Ga0495677_0010167 3300047445 Bacteria 3460
249 Ga0495677_0030512 3300047445 Bacteria 1962
250 Ga0495673_0000132 3300047469 Bacteria 138001
251 Ga0495673_0000330 3300047469 Bacteria 60940
252 Ga0495686_0000525 3300047472 Bacteria 55165
253 Ga0495686_0019298 3300047472 Bacteria 4557
254 Ga0495686_0095872 3300047472 Bacteria 1796
255 Ga0495686_0101528 3300047472 Bacteria 1734
256 Ga0495593_0011453 3300047673 Bacteria 5094
257 Ga0496102_0146238 3300048905 Bacteria 2218
258 Ga0496102_0184439 3300048905 Bacteria 1966
259 Ga0496102_0293113 3300048905 Bacteria 1534
260 Ga0496103_0037512 3300048906 Bacteria 2970
261 Ga0496106_0030270 3300048909 Bacteria 4037
262 Ga0496106_0088064 3300048909 Bacteria 2393
263 Ga0496107_0000110 3300048910 Bacteria 39732
264 Ga0496107_0112045 3300048910 Bacteria 2006
265 Ga0496108_0018026 3300048911 Bacteria 5776
266 Ga0496110_0095951 3300048913 Bacteria 2657
267 Ga0496111_0084439 3300048914 Bacteria 2321
268 Ga0496112_0093297 3300048915 Bacteria 2981
269 Ga0496115_0000598 3300048918 Bacteria 27622
270 Ga0496115_0026402 3300048918 Bacteria 4533
271 Ga0496115_0032935 3300048918 Bacteria 4091
272 Ga0496115_0101562 3300048918 Bacteria 2358
273 Ga0496115_0172779 3300048918 Bacteria 1787
274 Ga0496117_0007849 3300048920 Bacteria 10266
275 Ga0496119_0052676 3300048922 Bacteria 2491
276 Ga0496121_0000009 3300048924 Bacteria 836971
277 Ga0496122_0018335 3300048925 Bacteria 6476
278 Ga0496123_0000539 3300048926 Bacteria 65166
279 Ga0496124_0030836 3300048927 Bacteria 4751
280 Ga0496125_0010256 3300048928 Bacteria 9490
281 Ga0496126_0005285 3300048929 Bacteria 14819
282 Ga0495678_000191 3300049459 Bacteria 71862
283 Ga0495682_0021631 3300049460 Bacteria 2409
284 Ga0501033_0034365 3300049570 Bacteria 3804
285 Ga0501238_001526 3300049671 Bacteria 2688
286 Ga0501257_001961 3300049686 Bacteria 4290
287 Ga0501035_0031556 3300049822 Bacteria 4825
288 Ga0501044_0011457 3300049823 Bacteria 9606
289 Ga0501044_0016468 3300049823 Bacteria 7935
290 nmdc:mga00v17_405_c1 3300050491 Bacteria 24411
291 nmdc:mga07m45_1752_c1 3300050496 Bacteria 9997
292 Ga0500635_0000186 3300053080 Bacteria 32044
293 Ga0500578_0000008 3300053086 Bacteria 223557
294 Ga0500643_000376 3300053087 Bacteria 34859
295 Ga0500644_0000028 3300053088 Bacteria 92405
296 Ga0500644_0008157 3300053088 Bacteria 2756
297 Ga0500647_0001371 3300053091 Bacteria 8250
298 Ga0500651_0060455 3300053093 Bacteria 2367
299 Ga0500641_0000264 3300053096 Bacteria 19552
300 Ga0500641_0013384 3300053096 Bacteria 3014
301 Ga0500556_0000273 3300053104 Bacteria 40555
302 Ga0500556_0001358 3300053104 Bacteria 10788
303 Ga0500556_0034124 3300053104 Bacteria 1749
304 Ga0500562_000706 3300053108 Bacteria 8129
305 Ga0500562_000813 3300053108 Bacteria 7604
306 Ga0500562_000904 3300053108 Bacteria 7193
307 Ga0500562_003507 3300053108 Bacteria 3933
308 Ga0500572_000190 3300053111 Bacteria 21716
309 Ga0500594_0000015 3300053118 Bacteria 67180
310 Ga0500595_001608 3300053119 Bacteria 11900
311 Ga0500608_000025 3300053122 Bacteria 71403
312 Ga0500608_034945 3300053122 Bacteria 2396
313 Ga0500614_002640 3300053123 Bacteria 3971
314 Ga0500618_000034 3300053125 Bacteria 120560
315 Ga0500658_0002444 3300053134 Bacteria 7185
316 Ga0500559_0000005 3300053136 Bacteria 230231
317 Ga0500559_0000040 3300053136 Bacteria 106740
318 Ga0500559_0002934 3300053136 Bacteria 8575
319 Ga0500559_0010545 3300053136 Bacteria 3965
320 Ga0500559_0019141 3300053136 Bacteria 2894
321 Ga0500564_000007 3300053138 Bacteria 84097
322 Ga0500577_0001077 3300053142 Bacteria 7042
323 Ga0500619_019545 3300053154 Bacteria 1921
324 Ga0500622_0000105 3300053156 Bacteria 85855
325 Ga0500622_0002220 3300053156 Bacteria 14314
326 Ga0500636_0011842 3300053177 Bacteria 5108
327 Ga0500645_000419 3300053730 Bacteria 29374
328 Ga0500645_002080 3300053730 Bacteria 9264
329 Ga0500645_003577 3300053730 Bacteria 6240
330 Ga0500645_004920 3300053730 Bacteria 5022
331 Ga0500609_002701 3300053731 Bacteria 2526
332 Ga0500596_001239 3300053735 Bacteria 5165
333 Ga0500661_014050 3300055283 Bacteria 1442

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300025292 Ga0209676_1002066 Ga0209676_10020665 392
2 3300031901 Ga0307406_10000761 Ga0307406_1000076110 392
3 3300031911 Ga0307412_10022526 Ga0307412_100225263 392
4 3300005458 Ga0070681_10020463 Ga0070681_100204633 398
5 3300025913 Ga0207695_10001727 Ga0207695_100017275 398
6 3300005366 Ga0070659_100037343 Ga0070659_1000373433 400
7 3300005539 Ga0068853_100080066 Ga0068853_1000800662 400
8 3300005539 Ga0068853_100172769 Ga0068853_1001727691 400
9 3300013100 Ga0157373_10000955 Ga0157373_1000095517 400
10 3300013100 Ga0157373_10001704 Ga0157373_100017045 400
11 3300037418 Ga0395900_0145988 Ga0395900_0145988_47_1273 402
12 3300027378 Ga0209981_1001873 Ga0209981_10018733 405
13 3300053730 Ga0500645_003577 Ga0500645_003577_2388_3719 407
14 3300005458 Ga0070681_10012032 Ga0070681_100120325 410
15 3300028800 Ga0265338_10073709 Ga0265338_100737093 414
16 3300031456 Ga0307513_10005321 Ga0307513_100053218 415
17 3300031711 Ga0265314_10077579 Ga0265314_100775792 418
18 3300053136 Ga0500559_0000040 Ga0500559_0000040_85534_86808 418
19 3300031730 Ga0307516_10000004 Ga0307516_10000004316 419
20 3300046524 Ga0495648_0000029 Ga0495648_0000029_145684_146943 419
21 3300047469 Ga0495673_0000330 Ga0495673_0000330_31017_32276 419
22 3300053088 Ga0500644_0000028 Ga0500644_0000028_60997_62256 419
23 3300053138 Ga0500564_000007 Ga0500564_000007_61070_62329 419
24 3300055283 Ga0500661_014050 Ga0500661_014050_107_1366 419
25 iso_pu_bacteria 2843744320 2843748069 419
26 iso_pu_bacteria 2849573788 2849574652 419
27 iso_pu_bacteria 2898329390 2898329833 419
28 3300005331 Ga0070670_100000037 Ga0070670_100000037101 420
29 3300005347 Ga0070668_100000097 Ga0070668_10000009718 420
30 3300005367 Ga0070667_100000083 Ga0070667_100000083101 420
31 3300005548 Ga0070665_100002488 Ga0070665_10000248815 420
32 3300005617 Ga0068859_100130852 Ga0068859_1001308522 420
33 3300005618 Ga0068864_100001225 Ga0068864_10000122515 420
34 3300005841 Ga0068863_100000392 Ga0068863_10000039229 420
35 3300005842 Ga0068858_100071891 Ga0068858_1000718912 420
36 3300005843 Ga0068860_100000128 Ga0068860_10000012843 420
37 3300005844 Ga0068862_100000121 Ga0068862_10000012117 420
38 3300006048 Ga0075363_100074306 Ga0075363_1000743063 420
39 3300006931 Ga0097620_100130848 Ga0097620_1001308482 420
40 3300009551 Ga0105238_10072766 Ga0105238_100727662 420
41 3300009553 Ga0105249_10000410 Ga0105249_1000041022 420
42 3300014968 Ga0157379_10002929 Ga0157379_100029293 420
43 3300025903 Ga0207680_10012538 Ga0207680_100125382 420
44 3300025924 Ga0207694_10042964 Ga0207694_100429642 420
45 3300025925 Ga0207650_10000099 Ga0207650_10000099121 420
46 3300025961 Ga0207712_10003410 Ga0207712_100034105 420
47 3300025972 Ga0207668_10000828 Ga0207668_1000082815 420
48 3300025986 Ga0207658_10000209 Ga0207658_1000020920 420
49 3300026088 Ga0207641_10000341 Ga0207641_1000034145 420
50 3300026095 Ga0207676_10000637 Ga0207676_100006379 420
51 3300028379 Ga0268266_10005451 Ga0268266_100054514 420
52 3300028380 Ga0268265_10001336 Ga0268265_1000133616 420
53 3300028381 Ga0268264_10000059 Ga0268264_10000059209 420
54 3300030521 Ga0307511_10023276 Ga0307511_100232762 420
55 3300037471 Ga0395905_0148262 Ga0395905_0148262_547_1818 420
56 3300046616 Ga0495668_0128469 Ga0495668_0128469_82_1350 420
57 3300048905 Ga0496102_0146238 Ga0496102_0146238_253_1572 420
58 3300048906 Ga0496103_0037512 Ga0496103_0037512_1483_2802 420
59 3300053730 Ga0500645_004920 Ga0500645_004920_2741_4009 420
60 3300009093 Ga0105240_10018748 Ga0105240_100187482 421
61 3300025913 Ga0207695_10026722 Ga0207695_100267222 421
62 3300035691 Ga0373931_0082732 Ga0373931_0082732_188_1459 421
63 3300053156 Ga0500622_0002220 Ga0500622_0002220_9189_10460 423
64 iso_pu_bacteria 2643221583 2643924916 423
65 iso_pu_bacteria 2849560528 2849564892 423
66 iso_pu_bacteria 2851153111 2851154609 423
67 3300003781 Ga0055536_1004131 Ga0055536_10041311 425
68 3300003794 Ga0055531_10017703 Ga0055531_100177032 425
69 3300005548 Ga0070665_100000116 Ga0070665_10000011640 425
70 3300025292 Ga0209676_1000061 Ga0209676_1000061149 425
71 3300025304 Ga0209257_1000439 Ga0209257_10004399 425
72 3300028379 Ga0268266_10000064 Ga0268266_10000064146 425
73 3300031824 Ga0307413_10106739 Ga0307413_101067391 425
74 3300048918 Ga0496115_0032935 Ga0496115_0032935_1504_2874 425
75 3300053087 Ga0500643_000376 Ga0500643_000376_13820_15151 425
76 3300053096 Ga0500641_0000264 Ga0500641_0000264_13059_14390 425
77 3300053104 Ga0500556_0001358 Ga0500556_0001358_1075_2406 425
78 3300053108 Ga0500562_003507 Ga0500562_003507_94_1425 425
79 3300053730 Ga0500645_000419 Ga0500645_000419_26039_27370 425
80 iso_pu_bacteria 2643221663 2644352042 425
81 3300025299 Ga0209256_1008535 Ga0209256_10085352 427
82 3300053088 Ga0500644_0008157 Ga0500644_0008157_931_2307 427
83 iso_pu_bacteria 2643221699 2644553058 427
84 3300025972 Ga0207668_10009033 Ga0207668_100090337 428
85 3300049570 Ga0501033_0034365 Ga0501033_0034365_1145_2449 428
86 3300049823 Ga0501044_0016468 Ga0501044_0016468_4015_5319 428
87 iso_pu_bacteria 2643221545 2643747825 428
88 iso_pu_bacteria 2643221691 2644511439 428
89 3300013104 Ga0157370_10064898 Ga0157370_100648982 429
90 3300046558 Ga0495633_0000371 Ga0495633_0000371_1427_2740 429
91 3300046694 Ga0495649_0000868 Ga0495649_0000868_9351_10664 429
92 3300048914 Ga0496111_0084439 Ga0496111_0084439_74_1387 429
93 3300048925 Ga0496122_0018335 Ga0496122_0018335_1757_3070 429
94 3300048926 Ga0496123_0000539 Ga0496123_0000539_29135_30448 429
95 iso_pu_bacteria 2928972540 2928974831 429
96 iso_pu_bacteria 2941485952 2941487510 429
97 3300031251 Ga0265327_10002712 Ga0265327_100027125 430
98 3300046689 Ga0495613_0004373 Ga0495613_0004373_194_1537 430
99 3300053091 Ga0500647_0001371 Ga0500647_0001371_2652_3986 430
100 3300053111 Ga0500572_000190 Ga0500572_000190_6071_7405 430
101 3300005367 Ga0070667_100015009 Ga0070667_1000150094 431
102 3300005618 Ga0068864_100147155 Ga0068864_1001471552 431
103 3300005719 Ga0068861_100060146 Ga0068861_1000601462 431
104 3300005841 Ga0068863_100255657 Ga0068863_1002556572 431
105 3300005842 Ga0068858_100058358 Ga0068858_1000583584 431
106 3300005843 Ga0068860_100000145 Ga0068860_10000014563 431
107 3300025923 Ga0207681_10026538 Ga0207681_100265382 431
108 3300025925 Ga0207650_10029759 Ga0207650_100297594 431
109 3300025986 Ga0207658_10007659 Ga0207658_100076594 431
110 3300026118 Ga0207675_100040064 Ga0207675_1000400644 431
111 3300028380 Ga0268265_10004938 Ga0268265_100049385 431
112 3300028381 Ga0268264_10000046 Ga0268264_10000046112 431
113 3300028786 Ga0307517_10012250 Ga0307517_100122502 431
114 3300031251 Ga0265327_10006559 Ga0265327_100065595 431
115 3300031456 Ga0307513_10001153 Ga0307513_1000115310 431
116 3300046684 Ga0495669_0000024 Ga0495669_0000024_21296_22612 431
117 3300046684 Ga0495669_0000294 Ga0495669_0000294_26707_28023 431
118 3300047445 Ga0495677_0010167 Ga0495677_0010167_616_1932 431
119 3300047445 Ga0495677_0030512 Ga0495677_0030512_173_1489 431
120 3300049686 Ga0501257_001961 Ga0501257_001961_1980_3296 431
121 3300003794 Ga0055531_10003859 Ga0055531_100038595 432
122 3300005262 Ga0065165_1000277 Ga0065165_100027735 432
123 3300005331 Ga0070670_100042691 Ga0070670_1000426913 432
124 3300005336 Ga0070680_100014024 Ga0070680_1000140243 432
125 3300005339 Ga0070660_100025974 Ga0070660_1000259742 432
126 3300005339 Ga0070660_100210216 Ga0070660_1002102162 432
127 3300005341 Ga0070691_10016761 Ga0070691_100167614 432
128 3300005347 Ga0070668_100003647 Ga0070668_1000036475 432
129 3300005353 Ga0070669_100009680 Ga0070669_1000096804 432
130 3300005366 Ga0070659_100000206 Ga0070659_10000020615 432
131 3300005367 Ga0070667_100019958 Ga0070667_1000199584 432
132 3300005367 Ga0070667_100051675 Ga0070667_1000516753 432
133 3300005548 Ga0070665_100000278 Ga0070665_10000027837 432
134 3300005548 Ga0070665_100019655 Ga0070665_1000196555 432
135 3300005563 Ga0068855_100041785 Ga0068855_1000417854 432
136 3300005578 Ga0068854_100152084 Ga0068854_1001520842 432
137 3300005617 Ga0068859_100012653 Ga0068859_1000126533 432
138 3300005618 Ga0068864_100000115 Ga0068864_10000011551 432
139 3300005618 Ga0068864_100012817 Ga0068864_1000128177 432
140 3300005841 Ga0068863_100000007 Ga0068863_100000007126 432
141 3300005841 Ga0068863_100001891 Ga0068863_10000189115 432
142 3300005842 Ga0068858_100000031 Ga0068858_10000003166 432
143 3300005842 Ga0068858_100009930 Ga0068858_1000099306 432
144 3300005843 Ga0068860_100061797 Ga0068860_1000617973 432
145 3300005844 Ga0068862_100103173 Ga0068862_1001031733 432
146 3300006042 Ga0075368_10000507 Ga0075368_1000050710 432
147 3300006051 Ga0075364_10001151 Ga0075364_1000115110 432
148 3300006353 Ga0075370_10056959 Ga0075370_100569592 432
149 3300006881 Ga0068865_100001650 Ga0068865_1000016504 432
150 3300006931 Ga0097620_100012653 Ga0097620_1000126533 432
151 3300009092 Ga0105250_10016590 Ga0105250_100165902 432
152 3300009093 Ga0105240_10003036 Ga0105240_1000303630 432
153 3300009093 Ga0105240_10050418 Ga0105240_100504182 432
154 3300009093 Ga0105240_10071260 Ga0105240_100712604 432
155 3300009177 Ga0105248_10000154 Ga0105248_1000015436 432
156 3300009177 Ga0105248_10021528 Ga0105248_100215285 432
157 3300009177 Ga0105248_10056757 Ga0105248_100567572 432
158 3300009551 Ga0105238_10002686 Ga0105238_1000268615 432
159 3300009551 Ga0105238_10036220 Ga0105238_100362204 432
160 3300010375 Ga0105239_10183475 Ga0105239_101834753 432
161 3300014325 Ga0163163_10002453 Ga0163163_1000245314 432
162 3300014325 Ga0163163_10008010 Ga0163163_100080106 432
163 3300014968 Ga0157379_10027128 Ga0157379_100271283 432
164 3300014968 Ga0157379_10119639 Ga0157379_101196392 432
165 3300021384 Ga0213876_10023034 Ga0213876_100230342 432
166 3300025297 Ga0209758_1001598 Ga0209758_100159820 432
167 3300025298 Ga0209050_1000200 Ga0209050_100020039 432
168 3300025299 Ga0209256_1001833 Ga0209256_10018335 432
169 3300025304 Ga0209257_1000225 Ga0209257_100022539 432
170 3300025711 Ga0207696_1017211 Ga0207696_10172113 432
171 3300025909 Ga0207705_10083352 Ga0207705_100833522 432
172 3300025912 Ga0207707_10133457 Ga0207707_101334572 432
173 3300025913 Ga0207695_10001670 Ga0207695_100016704 432
174 3300025913 Ga0207695_10011998 Ga0207695_100119984 432
175 3300025913 Ga0207695_10134443 Ga0207695_101344432 432
176 3300025917 Ga0207660_10006796 Ga0207660_100067962 432
177 3300025917 Ga0207660_10056935 Ga0207660_100569352 432
178 3300025925 Ga0207650_10039766 Ga0207650_100397662 432
179 3300025932 Ga0207690_10000129 Ga0207690_1000012951 432
180 3300025932 Ga0207690_10025820 Ga0207690_100258202 432
181 3300025938 Ga0207704_10001553 Ga0207704_100015533 432
182 3300025941 Ga0207711_10000574 Ga0207711_100005745 432
183 3300025941 Ga0207711_10002202 Ga0207711_1000220222 432
184 3300025949 Ga0207667_10105079 Ga0207667_101050794 432
185 3300025972 Ga0207668_10000028 Ga0207668_1000002841 432
186 3300025972 Ga0207668_10003243 Ga0207668_100032435 432
187 3300025986 Ga0207658_10017377 Ga0207658_100173775 432
188 3300025986 Ga0207658_10021798 Ga0207658_100217983 432
189 3300026035 Ga0207703_10000038 Ga0207703_10000038121 432
190 3300026035 Ga0207703_10032193 Ga0207703_100321933 432
191 3300026067 Ga0207678_10055804 Ga0207678_100558045 432
192 3300026088 Ga0207641_10000012 Ga0207641_10000012183 432
193 3300026088 Ga0207641_10004917 Ga0207641_100049173 432
194 3300026088 Ga0207641_10031354 Ga0207641_100313543 432
195 3300026095 Ga0207676_10000610 Ga0207676_1000061027 432
196 3300026095 Ga0207676_10008902 Ga0207676_100089025 432
197 3300026095 Ga0207676_10154975 Ga0207676_101549752 432
198 3300026142 Ga0207698_10062272 Ga0207698_100622723 432
199 3300028379 Ga0268266_10001158 Ga0268266_1000115813 432
200 3300028380 Ga0268265_10112884 Ga0268265_101128843 432
201 3300031456 Ga0307513_10002695 Ga0307513_1000269513 432
202 3300035692 Ga0373935_0057931 Ga0373935_0057931_691_2007 432
203 3300037068 Ga0373925_0000478 Ga0373925_0000478_13574_14893 432
204 3300037312 Ga0395899_0000407 Ga0395899_0000407_21042_22346 432
205 3300037312 Ga0395899_0038572 Ga0395899_0038572_478_1794 432
206 3300037418 Ga0395900_0000009 Ga0395900_0000009_257615_258919 432
207 3300037466 Ga0395898_0027308 Ga0395898_0027308_1276_2592 432
208 3300037471 Ga0395905_0004384 Ga0395905_0004384_13085_14389 432
209 3300037471 Ga0395905_0135408 Ga0395905_0135408_732_2048 432
210 3300037471 Ga0395905_0180221 Ga0395905_0180221_638_1954 432
211 3300038443 Ga0395901_0000014 Ga0395901_0000014_208814_210118 432
212 3300039437 Ga0436365_1718085 Ga0436365_1718085_1682_3001 432
213 3300046460 Ga0495638_0000595 Ga0495638_0000595_6388_7686 432
214 3300046512 Ga0495610_0000205 Ga0495610_0000205_57452_58750 432
215 3300046557 Ga0495622_0023187 Ga0495622_0023187_260_1579 432
216 3300047320 Ga0495672_0027097 Ga0495672_0027097_923_2242 432
217 3300047469 Ga0495673_0000132 Ga0495673_0000132_57803_59143 432
218 3300047472 Ga0495686_0019298 Ga0495686_0019298_1018_2337 432
219 3300047673 Ga0495593_0011453 Ga0495593_0011453_3580_4899 432
220 3300048905 Ga0496102_0184439 Ga0496102_0184439_489_1808 432
221 3300048905 Ga0496102_0293113 Ga0496102_0293113_96_1415 432
222 3300048909 Ga0496106_0030270 Ga0496106_0030270_2382_3701 432
223 3300048909 Ga0496106_0088064 Ga0496106_0088064_286_1605 432
224 3300048910 Ga0496107_0112045 Ga0496107_0112045_140_1459 432
225 3300048911 Ga0496108_0018026 Ga0496108_0018026_64_1383 432
226 3300048913 Ga0496110_0095951 Ga0496110_0095951_451_1770 432
227 3300048915 Ga0496112_0093297 Ga0496112_0093297_826_2142 432
228 3300048918 Ga0496115_0000598 Ga0496115_0000598_11563_12882 432
229 3300048918 Ga0496115_0101562 Ga0496115_0101562_729_2048 432
230 3300048920 Ga0496117_0007849 Ga0496117_0007849_4038_5357 432
231 3300048922 Ga0496119_0052676 Ga0496119_0052676_840_2159 432
232 3300048924 Ga0496121_0000009 Ga0496121_0000009_59575_60894 432
233 3300049460 Ga0495682_0021631 Ga0495682_0021631_1010_2329 432
234 3300049822 Ga0501035_0031556 Ga0501035_0031556_3064_4383 432
235 3300049823 Ga0501044_0011457 Ga0501044_0011457_5866_7185 432
236 3300050491 nmdc:mga00v17_405_c1 nmdc:mga00v17_405_c1_18391_19710 432
237 3300050496 nmdc:mga07m45_1752_c1 nmdc:mga07m45_1752_c1_4022_5341 432
238 3300053080 Ga0500635_0000186 Ga0500635_0000186_13442_14761 432
239 3300053093 Ga0500651_0060455 Ga0500651_0060455_291_1610 432
240 3300053104 Ga0500556_0034124 Ga0500556_0034124_27_1346 432
241 3300053108 Ga0500562_000706 Ga0500562_000706_5296_6615 432
242 3300053108 Ga0500562_000904 Ga0500562_000904_3734_5050 432
243 3300053119 Ga0500595_001608 Ga0500595_001608_10394_11713 432
244 3300053123 Ga0500614_002640 Ga0500614_002640_1319_2638 432
245 3300053136 Ga0500559_0010545 Ga0500559_0010545_1740_3059 432
246 3300053142 Ga0500577_0001077 Ga0500577_0001077_1438_2778 432
247 3300053154 Ga0500619_019545 Ga0500619_019545_592_1911 432
248 3300053177 Ga0500636_0011842 Ga0500636_0011842_2475_3794 432
249 3300053735 Ga0500596_001239 Ga0500596_001239_339_1658 432
250 iso_pu_bacteria 2643221598 2644000211 432
251 iso_pu_bacteria 2643221614 2644085028 432
252 iso_pu_bacteria 2643221661 2644342580 432
253 iso_pu_bacteria 2643221666 2644365880 432
254 3300039447 Ga0436361_1148114 Ga0436361_1148114_16232_17542 433
255 3300046512 Ga0495610_0003505 Ga0495610_0003505_1708_3048 433
256 3300047472 Ga0495686_0095872 Ga0495686_0095872_35_1375 433
257 3300025932 Ga0207690_10031992 Ga0207690_100319923 434
258 3300026041 Ga0207639_10018947 Ga0207639_100189472 434
259 3300026041 Ga0207639_10206536 Ga0207639_102065362 434
260 3300031251 Ga0265327_10000166 Ga0265327_1000016628 434
261 3300009093 Ga0105240_10002344 Ga0105240_1000234422 435
262 3300025913 Ga0207695_10012731 Ga0207695_100127318 435
263 3300028573 Ga0265334_10001441 Ga0265334_100014412 435
264 3300028800 Ga0265338_10019502 Ga0265338_100195023 435
265 3300028800 Ga0265338_10058540 Ga0265338_100585403 435
266 3300031711 Ga0265314_10035212 Ga0265314_100352124 435
267 3300031852 Ga0307410_10015735 Ga0307410_100157353 435
268 3300037312 Ga0395899_0000013 Ga0395899_0000013_69642_70979 435
269 3300037418 Ga0395900_0022246 Ga0395900_0022246_333_1670 435
270 3300039437 Ga0436365_0504517 Ga0436365_0504517_4549_5886 435
271 3300039447 Ga0436361_0394361 Ga0436361_0394361_51_1388 435
272 3300045049 Ga0466959_0017967 Ga0466959_0017967_3670_5007 435
273 3300048918 Ga0496115_0172779 Ga0496115_0172779_222_1559 435
274 3300003781 Ga0055536_1009633 Ga0055536_10096331 438
275 3300003781 Ga0055536_1009641 Ga0055536_10096411 438
276 3300003791 Ga0055530_10008860 Ga0055530_100088603 438
277 3300003791 Ga0055530_10008864 Ga0055530_100088641 438
278 3300003794 Ga0055531_10001651 Ga0055531_100016513 438
279 3300025292 Ga0209676_1000057 Ga0209676_100005732 438
280 3300025292 Ga0209676_1001335 Ga0209676_10013353 438
281 3300025295 Ga0209564_1018089 Ga0209564_10180892 438
282 3300025298 Ga0209050_1000135 Ga0209050_100013513 438
283 3300025298 Ga0209050_1001221 Ga0209050_100122125 438
284 3300025299 Ga0209256_1011418 Ga0209256_10114184 438
285 3300025304 Ga0209257_1002835 Ga0209257_10028353 438
286 3300025304 Ga0209257_1008207 Ga0209257_10082076 438
287 3300028794 Ga0307515_10025849 Ga0307515_100258497 438
288 3300046460 Ga0495638_0000585 Ga0495638_0000585_7965_9302 438
289 3300046512 Ga0495610_0001459 Ga0495610_0001459_19259_20596 438
290 3300046518 Ga0495631_0007090 Ga0495631_0007090_2491_3828 438
291 3300046520 Ga0495637_0030677 Ga0495637_0030677_381_1718 438
292 3300046616 Ga0495668_0000345 Ga0495668_0000345_19454_20791 438
293 3300046616 Ga0495668_0075190 Ga0495668_0075190_298_1635 438
294 3300047472 Ga0495686_0000525 Ga0495686_0000525_12578_13915 438
295 3300048927 Ga0496124_0030836 Ga0496124_0030836_10_1347 438
296 3300048928 Ga0496125_0010256 Ga0496125_0010256_6394_7731 438
297 3300048929 Ga0496126_0005285 Ga0496126_0005285_10592_11929 438
298 3300049459 Ga0495678_000191 Ga0495678_000191_57177_58514 438
299 3300053086 Ga0500578_0000008 Ga0500578_0000008_31740_33077 438
300 3300053096 Ga0500641_0013384 Ga0500641_0013384_689_2026 438
301 3300053108 Ga0500562_000813 Ga0500562_000813_1730_3067 438
302 3300053118 Ga0500594_0000015 Ga0500594_0000015_20859_22196 438
303 3300053156 Ga0500622_0000105 Ga0500622_0000105_48728_50065 438
304 iso_pu_bacteria 2582581279 2585148633 438
305 iso_pu_bacteria 2585428106 2587916592 438
306 iso_pu_bacteria 2643221640 2644225877 438
307 iso_pu_bacteria 2643221642 2644235366 438
308 iso_pu_bacteria 2884960567 2884964987 438
309 iso_pu_bacteria 2928531327 2928535260 438
310 3300003771 Ga0055526_1024533 Ga0055526_10245332 439
311 3300005262 Ga0065165_1000979 Ga0065165_100097915 439
312 3300006195 Ga0075366_10025206 Ga0075366_100252063 439
313 3300025295 Ga0209564_1005262 Ga0209564_10052625 439
314 3300046453 Ga0495627_002098 Ga0495627_002098_21_1361 439
315 3300047472 Ga0495686_0101528 Ga0495686_0101528_58_1398 439
316 3300053122 Ga0500608_000025 Ga0500608_000025_67169_68509 439
317 3300053136 Ga0500559_0000005 Ga0500559_0000005_26061_27416 439
318 3300053136 Ga0500559_0019141 Ga0500559_0019141_129_1469 439
319 iso_pu_bacteria 2510917020 2511122759 439
320 iso_pu_bacteria 2791355048 2792463341 439
321 iso_pu_bacteria 2857504554 2857506232 439
322 iso_pu_bacteria 2582581280 2585153852 440
323 iso_pu_bacteria 2582581293 2585198065 440
324 iso_pu_bacteria 2818991435 2819537963 440
325 iso_pu_bacteria 2818991454 2819648476 440
326 3300003215 JGI25153J46596_10011054 JGI25153J46596_100110544 444
327 3300003775 Ga0055524_1017917 Ga0055524_10179172 444
328 3300003790 Ga0055528_1009282 Ga0055528_10092823 444
329 3300003794 Ga0055531_10004432 Ga0055531_100044326 444
330 3300025263 Ga0209565_1000475 Ga0209565_100047524 444
331 3300025273 Ga0209673_1000941 Ga0209673_10009415 444
332 3300025297 Ga0209758_1002304 Ga0209758_10023046 444
333 3300025297 Ga0209758_1004011 Ga0209758_10040119 444
334 3300025298 Ga0209050_1023677 Ga0209050_10236772 444
335 3300025299 Ga0209256_1002440 Ga0209256_10024409 444
336 3300025304 Ga0209257_1000350 Ga0209257_100035076 444
337 3300028794 Ga0307515_10046005 Ga0307515_100460054 444
338 3300046460 Ga0495638_0004039 Ga0495638_0004039_3558_4913 444
339 3300046460 Ga0495638_0070579 Ga0495638_0070579_117_1472 444
340 3300046471 Ga0495650_0000007 Ga0495650_0000007_139544_140899 444
341 3300046506 Ga0495583_0000037 Ga0495583_0000037_45424_46779 444
342 3300046507 Ga0495606_0041127 Ga0495606_0041127_1714_3069 444
343 3300046513 Ga0495616_0000159 Ga0495616_0000159_55315_56670 444
344 3300046518 Ga0495631_0038935 Ga0495631_0038935_518_1873 444
345 3300046519 Ga0495632_0002841 Ga0495632_0002841_232_1587 444
346 3300046524 Ga0495648_0052484 Ga0495648_0052484_159_1514 444
347 3300046530 Ga0495654_0000100 Ga0495654_0000100_84842_86197 444
348 3300046660 Ga0495625_0000080 Ga0495625_0000080_45024_46379 444
349 3300046660 Ga0495625_0006452 Ga0495625_0006452_8950_10305 444
350 3300046660 Ga0495625_0007880 Ga0495625_0007880_2240_3595 444
351 3300046810 Ga0495660_0034559 Ga0495660_0034559_254_1609 444
352 3300047320 Ga0495672_0027862 Ga0495672_0027862_564_1919 444
353 3300048910 Ga0496107_0000110 Ga0496107_0000110_25617_26972 444
354 3300048918 Ga0496115_0026402 Ga0496115_0026402_73_1428 444
355 3300049671 Ga0501238_001526 Ga0501238_001526_921_2276 444
356 3300053104 Ga0500556_0000273 Ga0500556_0000273_13615_14970 444
357 3300053122 Ga0500608_034945 Ga0500608_034945_640_1995 444
358 3300053125 Ga0500618_000034 Ga0500618_000034_99596_100951 444
359 3300053134 Ga0500658_0002444 Ga0500658_0002444_2555_3910 444
360 3300053136 Ga0500559_0002934 Ga0500559_0002934_434_1789 444
361 3300053730 Ga0500645_002080 Ga0500645_002080_1421_2776 444
362 3300053731 Ga0500609_002701 Ga0500609_002701_1104_2459 444
363 iso_pu_bacteria 2643221552 2643778507 444
364 iso_pu_bacteria 2643221584 2643931338 444

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF16360

GTP-bdg_M

GTP-binding GTPase Middle Region

106

185

0.99

PF13167

GTP-bdg_N

GTP-binding GTPase N-terminal

16

104

0.98

PF00034

Cytochrom_C

Cytochrome c

364

450

0.89

PF01926

MMR_HSR1

50S ribosome-binding GTPase

192

313

0.75

PF13442

Cytochrome_CBB3

Cytochrome C oxidase, cbb3-type, subunit III

362

447

0.75

Structural Annotation

Top 5 Hits

ID Description Score Start End
7of2-assembly1.cif.gz_C structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with gtpbp6. 0.8129 7 435
7of2-assembly1.cif.gz_C structure of a human mitochondrial ribosome large subunit assembly intermediate in complex with gtpbp6. 0.8111 7 435
8a57-assembly1.cif.gz_D cryo-em structure of hflxr bound to the listeria monocytogenes 50s ribosomal subunit. 0.7982 9 432
8a57-assembly1.cif.gz_D cryo-em structure of hflxr bound to the listeria monocytogenes 50s ribosomal subunit. 0.7912 9 432
7o9k-assembly1.cif.gz_G human mitochondrial ribosome large subunit assembly intermediate with mterf4-nsun4, mrm2, mtg1, the malsu module, gtpbp5 and mtef-tu 0.7859 206 380
ID Description Score Start End Superfamily
af_Q58526_7_100_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9271 36 121 3.40.50.11060
af_Q2R1U5_327_493_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9154 207 380 3.40.50.300
af_Q2R1U5_146_245_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9145 22 122 3.40.50.11060
af_Q20446_50_175_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.9143 24 144 3.40.50.11060
af_Q2FYY9_24_121_3.40.50.11060 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;GTPase HflX, N-terminal domain 0.911 29 120 3.40.50.11060
ID Description Score Start End GO Terms
AF-A0A258K7C6-F1-model_v4 GTPase HflX 0.9301 307 443 GO:0005525
GO:0005737
GO:0043022
AF-A0A7S3TRV4-F1-model_v4 GTPase HflX 0.9287 10 144 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A6I4XM64-F1-model_v4 GTPase HflX 0.926 6 144 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A6L5K5C7-F1-model_v4 GTPase HflX 0.9257 1 145 GO:0005525
GO:0005737
GO:0043022
GO:0046872
AF-A0A258D1K8-F1-model_v4 GTPase HflX (GTP-binding protein HflX) 0.9238 1 378 GO:0003924
GO:0005525
GO:0005737
GO:0043022
GO:0046872

Feature Viewer

pLDDT pTM Quality
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Predicted Structure (AlphaFold2)

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